CaUC07G128610 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC07G128610
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr07: 4287787 .. 4288372 (+)
RNA-Seq ExpressionCaUC07G128610
SyntenyCaUC07G128610
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTTTGAAAATATGATGATGTGCTTTTGCTCTGTTCCTAGCCCATCACCCCAGTTTACTAACATTCAGTTATTTGATTATGTTTTAGGATTTGGTGACAGTATAATCTACATTGTATTATCATTTACAAGATAAGCTACCATAGTATGATAGTAATAAGTAGAGTTGGAAGAGGCCTACAAGGTTTTGATCAAAGAATGAAGCTTGTATGGTTCATTCTGTTCCATGTTGGTCAAGTTTGATCAGTCTTAGGTTTCAAAGCTGAAGAGTGATGATGTAGATTTCTTCTGGAAGTGGAACTCTTTCAATATCTGCATCTTAATTTATCCTTATTATCTATTATTGTAATGACCATGTTCACTCAGTATATGATGAGTTTAGTTCAGTTTAGTATATTTTGTGAATTCGAAAGGTGTGATGTCTACTTTGTCCGACTATTTGTGCTGCTTCTGGTTGTGATTAAATGTTGATCTATAAAATCCATGAATGTAAGCAGCGCTCGAGAGAGCAAGAAGAAGAAAGATGCCAAACATGTGTATTTGCTTCACATGGAGAACAGGAAGAACTACAAAATGGAAAATGA

mRNA sequence

ATGGATTTTGAAAATATGATGATGTGCTTTTGCTCTGTTCCTAGCCCATCACCCCAGTTTACTAACATTCAGTTATTTGATTATGTTTTAGGATTTGGTGACAGTATAATCTACATTCGCTCGAGAGAGCAAGAAGAAGAAAGATGCCAAACATGTGTATTTGCTTCACATGGAGAACAGGAAGAACTACAAAATGGAAAATGA

Coding sequence (CDS)

ATGGATTTTGAAAATATGATGATGTGCTTTTGCTCTGTTCCTAGCCCATCACCCCAGTTTACTAACATTCAGTTATTTGATTATGTTTTAGGATTTGGTGACAGTATAATCTACATTCGCTCGAGAGAGCAAGAAGAAGAAAGATGCCAAACATGTGTATTTGCTTCACATGGAGAACAGGAAGAACTACAAAATGGAAAATGA

Protein sequence

MDFENMMMCFCSVPSPSPQFTNIQLFDYVLGFGDSIIYIRSREQEEERCQTCVFASHGEQEELQNGK
Homology
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BLAST of CaUC07G128610 vs. ExPASy TrEMBL
Match: A0A0A0KNZ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G188900 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.2e-05
Identity = 30/43 (69.77%), Postives = 32/43 (74.42%), Query Frame = 0 

Query: 1   MDFENMMMCF----CSVPSPSPQFTNIQLFDYVLGFGDSIIYI 40
           +DF   +M F    CSVP PS QFTNIQLFDYVLGFGDSII I
Sbjct: 152 IDFRQSLMYFSPWICSVPIPSSQFTNIQLFDYVLGFGDSIIDI 194

The following BLAST results are available for this feature:
BLAST of CaUC07G128610 vs.
Match NameE-valueIdentityDescription
BLAST of CaUC07G128610 vs.
Match NameE-valueIdentityDescription
BLAST of CaUC07G128610 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KNZ91.2e-0569.77Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G188900 PE=4 SV=1[more]
BLAST of CaUC07G128610 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC07G128610.1CaUC07G128610.1mRNA