CaUC06G117510 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCTTCTCTACTTTATTTCTTTTCTTTCTCTCTTCACACTCTTCTTCTTCTTCTTCACTAAAAAGTTGAGTGTCGTTTGTTTAATTTTCTGTGAAAAACTCATCAAAAATCCATGGCGGCCAGCTGCATCGATATTGCACCTGAACAACTCTGCTACATCCCTTGCAATTTTTGCAATATTGTTCTTGCGGTATATATATAAACATCTCTTTCTTTTTTGTTTTTTGGGTTAATTTTGCCTAACTTTTCTGATCTTTAGATCTTGATGGAAATTTGAAAAATGGGTTTTCTTTTTTCTAATTTCTCTATTCATGCTTTGTTTAATTTGATTTTCAATTCAGTCAGGTCTCCATTGTTTTGGACCTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTGCAGTCAAAATAAAGTCATAGATACCTGAAAATACAGATGAGAGAAAGAGAAAGAGAGAGAGATTAATAATTTGTGTGTTTTTGTTTGACAATTTTGAATTTAGAAAAATTATTGGGATTGAAATCTTTGGAAGAAGAGATAATGGAGTTTCAAAAGTTGAAAAAAAAAAAAAAATAAGGTCTTGGATGACAAGGATGATGAAGACAAGTCATGAATAATGCCCTTTTCTTTTCTTTAAAAATGCCACTCTCTATAAGCCCTCAAAACCCACCTGCCTTTACCTTAAGGGGAAAATCACTAATGAAGATCTCACTTCAAACTTCAAACCCACCAAAAAAAAAAAAGCCCCATCTTTTTTGCAACCCATTAAAGAAAAACCCTAAACAACTACACCCTTCTAGGTTTCCATCCTAATATTAGAAAAAAAAAATGGTTTAAATCCTCTTCATTTTACATAGATTTTACCTATAAATTTGTTTGAGAAGGAATTTGATGATGATGATGATGATGATAATGATGATAATGATGATGAGCAGGTGAGTGTTCCATGCAGTAGTTTGTTTGATATTGTGACAGTCCGATGTGGGCACTGCACAAATCTGTGGTCCGTCAATATGGCTGCTGCCTTTCAGTCTCTTTCTTGGCAAGATCTTCAGGTAACCCTAATTTCCCACCTAAACTAATCTTTTTATTTTACCCAAAACTAAATCTTTATTATTTTTTTCATTTTTTCATTTTTTTTACAAAATTAATCCATCTGACCCAGATTCTCAAATTAATGTTTAAATTCAAAAACAAAAACCCTAGGTAGCTTCCACAGCCGCCATAATCCCATAGTCTAACTCTTTTATCCATCAAATTTCAACATTTTCTTTCAGGTTTTATTGAGAAGTGTTAACCCTTTTTAAATGCCTTTTTCTTTTAGCCTTGTTTTGCTAGATTGTGCTTTTTGGGTTTAGGGTTCTTTTAGGTTTTTGTGATTATTGTTTATTTTTCTAGGGGAGAGAGCTTCTTTCACCTATATACCTATTACCTATACCTAGGTTTTTGTCATCTACTCTTCCAACACAAACACAAAATATAAAAAGGAGGGAAAAAAAAAAAAAAAAAAAAACAAAACAAAACAAAAATTTCAATTTTTTTTATGGAGATCTGAAAGTCCCTTTTGACTTTGGTTTGAGATTGATCTGCCAAATCAAGGTATTATATGCTTTTATTTCCAACTGATTCAGTCATTTCAATGTTGGAATATTTCCTTCTGGGTTCTCTTATGAAACATCATTTCATAAACTTCCTTCCTCCCCCACTTCTCCAATAATAATAATGTACTTCCTTCCTTAAAACTTTGTCACACTCATCACATAATTGAAAACACTAATTTTTAAAATAATGTGTTAACTGTTGAGCTATATAACAACGAAAGTTATATTGTAGGTTCCAAATTACAATTTGTATGGTTGTAGTGGAGGAGATTTTCAAGGTGATTTTGGATCATCATCCAAATGTAATAACAGTAATAAGATGGAAATTCGAGCACCCACTACAATTGCAGCAGAGGAGAGGGTTGTGAATCGACGTCAGTATATTTTCGCTTTCCTTTTTAAAAAAAAATTATATTTTTCCTATTTATTTGAAGTTTTATTCATTTACTTGGAAAAAGTTGAAAGTTTATGAGTTGTTGTTATCTTTTTTCAGCTCCCGAGAAGAGGCAGAGAGTACCTTCTGCATATAATCAGTTCATAAAGTGAGTAACCAAAGCCTTCATAAGTGCTTTCTCTTTGTCATTTCTTTCCAATTTATTCATTAATATTTTTAATTAATAGGTTCATTATATATTTATATTATGCACTTCTTCACTTCTTAATTATCTTCATTCAACTGTTTGATAACCAAGAATCGTGGTTTGTTTTTGTATTATTTCCTTATAATTTATTCATCGTTTTCTAATAAACATTGGAAGTCTAAACCAAATTTAAAAAATGAAACATTTTAGTTGTATGGATGTTGATAACAATCCTCAAAAAAAAAAATAAAATAAAATAAAATAAAATAAAATAAAATAGTGTTTGTAAAAATAAAAATTAAATAATGGTTATCAACAGAACTTTATTTTAATGAATTTAATTGTATTATGATGTTGCTACAGAGAGGAAATCCAAAGGATCAAGGCAAGTAATCCTGAGATTAGCCACAGGGAAGCTTTCAGTACGGCAGCCAAAAACGTAAGTTTAAAAGAAAAAAAAAATCGATGATGTAATAATAAATTTTGCATAATAATATAATAACAATAATAATAATGGTAGATGAATTTTAATTTCAATTTTGATTGGTTAATTTGATCAGTGGGCACACTTTCCTCGTATTCACTTTGGTCTGATGTTGGAAACCAACAATCAAGTGAAGCTAGATGATGTAAGTACTTTTATTATTATGCTCTTATTAATTAATGTAACATGTCACCTATAATTAAACTCAATCAAATGAGGAAAAAAAAATTAACTTAGAAATTTTAGTTACTAAACTTTTAGATTTGTATGTATTTAGCCTCCGAACTTCAAAAGTGTAATATATGTCCATAAATTTGAAGTTTATGTATAATGAAACCCTAAATGATCTATGAATTTTAAAATTTTCAAGTAGATTGAATATGAAAATTTGAAATCAATAGAGCTAGACGAAAACTTCAAAGTTGAGATAATAAACTTGTAATTTAACGAATGTACATATATTTATACATTTATCATCATTAATCTAAAAGCTAGGAACTTTTGAACTTGTTGCTATATTTGTTGAATTTCATCCAAACTATACATTTCATATTGTTTAATCTTTTTTTCTTTCTTTTTATGGTATCAGGGTTCTGAGCGTTTAATGACAAGGGCTGCACTATTAAACAAATGAGTAAAACTGATATGAATGAAGTTGCTGCTTTTTTTCCACCTCTTGTTTAGTTCTGTGACTTTCTACTACCTTCTTTTTCTTCTTCTTTTACCCCCATGAAAAACAAAGGCCAATGACTTGAATTTGTTGTTTAAATTCAAGTGACAATTATTATAATTAATATCCATCTTTGGGTTGCACTATTTAACTCCACTATGGTTATAAAAAATATGACTTGAAAATGCCAAAATCTCC TTCTTCTCTACTTTATTTCTTTTCTTTCTCTCTTCACACTCTTCTTCTTCTTCTTCACTAAAAAGTTGAGTGTCGTTTGTTTAATTTTCTGTGAAAAACTCATCAAAAATCCATGGCGGCCAGCTGCATCGATATTGCACCTGAACAACTCTGCTACATCCCTTGCAATTTTTGCAATATTGTTCTTGCGTCAGGTCTCCATTGTTTTGGACCTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTGCAATTTTACCTATAAATTTGTTTGAGAAGGAATTTGATGATGATGATGATGATGATAATGATGATAATGATGATGAGCAGGTGAGTGTTCCATGCAGTAGTTTGTTTGATATTGTGACAGTCCGATGTGGGCACTGCACAAATCTGTGGTCCGTCAATATGGCTGCTGCCTTTCAGTCTCTTTCTTGGCAAGATCTTCAGGTTCCAAATTACAATTTGTATGGTTGTAGTGGAGGAGATTTTCAAGGTGATTTTGGATCATCATCCAAATGTAATAACAGTAATAAGATGGAAATTCGAGCACCCACTACAATTGCAGCAGAGGAGAGGGTTGTGAATCGACCTCCCGAGAAGAGGCAGAGAGTACCTTCTGCATATAATCAGTTCATAAAAGAGGAAATCCAAAGGATCAAGGCAAGTAATCCTGAGATTAGCCACAGGGAAGCTTTCAGTACGGCAGCCAAAAACTGGGCACACTTTCCTCGTATTCACTTTGGTCTGATGTTGGAAACCAACAATCAAGTGAAGCTAGATGATGGTTCTGAGCGTTTAATGACAAGGGCTGCACTATTAAACAAATGAGTAAAACTGATATGAATGAAGTTGCTGCTTTTTTTCCACCTCTTGTTTAGTTCTGTGACTTTCTACTACCTTCTTTTTCTTCTTCTTTTACCCCCATGAAAAACAAAGGCCAATGACTTGAATTTGTTGTTTAAATTCAAGTGACAATTATTATAATTAATATCCATCTTTGGGTTGCACTATTTAACTCCACTATGGTTATAAAAAATATGACTTGAAAATGCCAAAATCTCC ATGGCGGCCAGCTGCATCGATATTGCACCTGAACAACTCTGCTACATCCCTTGCAATTTTTGCAATATTGTTCTTGCGTCAGGTCTCCATTGTTTTGGACCTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTGCAATTTTACCTATAAATTTGTTTGAGAAGGAATTTGATGATGATGATGATGATGATAATGATGATAATGATGATGAGCAGGTGAGTGTTCCATGCAGTAGTTTGTTTGATATTGTGACAGTCCGATGTGGGCACTGCACAAATCTGTGGTCCGTCAATATGGCTGCTGCCTTTCAGTCTCTTTCTTGGCAAGATCTTCAGGTTCCAAATTACAATTTGTATGGTTGTAGTGGAGGAGATTTTCAAGGTGATTTTGGATCATCATCCAAATGTAATAACAGTAATAAGATGGAAATTCGAGCACCCACTACAATTGCAGCAGAGGAGAGGGTTGTGAATCGACCTCCCGAGAAGAGGCAGAGAGTACCTTCTGCATATAATCAGTTCATAAAAGAGGAAATCCAAAGGATCAAGGCAAGTAATCCTGAGATTAGCCACAGGGAAGCTTTCAGTACGGCAGCCAAAAACTGGGCACACTTTCCTCGTATTCACTTTGGTCTGATGTTGGAAACCAACAATCAAGTGAAGCTAGATGATGGTTCTGAGCGTTTAATGACAAGGGCTGCACTATTAAACAAATGA MAASCIDIAPEQLCYIPCNFCNIVLASGLHCFGPFSSSSSSSSSSSSFAILPINLFEKEFDDDDDDDNDDNDDEQVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQDLQVPNYNLYGCSGGDFQGDFGSSSKCNNSNKMEIRAPTTIAAEERVVNRPPEKRQRVPSAYNQFIKEEIQRIKASNPEISHREAFSTAAKNWAHFPRIHFGLMLETNNQVKLDDGSERLMTRAALLNK Homology
BLAST of CaUC06G117510 vs. NCBI nr
Match: XP_038878725.1 (axial regulator YABBY 5-like [Benincasa hispida]) HSP 1 Score: 351.3 bits (900), Expect = 6.7e-93 Identity = 183/241 (75.93%), Postives = 186/241 (77.18%), Query Frame = 0
BLAST of CaUC06G117510 vs. NCBI nr
Match: XP_004150030.1 (axial regulator YABBY 5-like [Cucumis sativus] >KAE8653111.1 hypothetical protein Csa_019794 [Cucumis sativus]) HSP 1 Score: 349.0 bits (894), Expect = 3.3e-92 Identity = 180/242 (74.38%), Postives = 186/242 (76.86%), Query Frame = 0
BLAST of CaUC06G117510 vs. NCBI nr
Match: XP_023004055.1 (axial regulator YABBY 5-like [Cucurbita maxima]) HSP 1 Score: 337.8 bits (865), Expect = 7.7e-89 Identity = 174/239 (72.80%), Postives = 181/239 (75.73%), Query Frame = 0
BLAST of CaUC06G117510 vs. NCBI nr
Match: XP_016899792.1 (PREDICTED: axial regulator YABBY 5-like [Cucumis melo]) HSP 1 Score: 337.0 bits (863), Expect = 1.3e-88 Identity = 166/178 (93.26%), Postives = 172/178 (96.63%), Query Frame = 0
BLAST of CaUC06G117510 vs. NCBI nr
Match: XP_022144840.1 (axial regulator YABBY 5-like [Momordica charantia]) HSP 1 Score: 333.6 bits (854), Expect = 1.4e-87 Identity = 178/240 (74.17%), Postives = 182/240 (75.83%), Query Frame = 0
BLAST of CaUC06G117510 vs. ExPASy Swiss-Prot
Match: Q8GW46 (Axial regulator YABBY 5 OS=Arabidopsis thaliana OX=3702 GN=YAB5 PE=1 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 1.2e-55 Identity = 120/218 (55.05%), Postives = 136/218 (62.39%), Query Frame = 0
BLAST of CaUC06G117510 vs. ExPASy Swiss-Prot
Match: Q10FZ7 (Protein YABBY 2 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB2 PE=2 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 1.4e-37 Identity = 94/219 (42.92%), Postives = 120/219 (54.79%), Query Frame = 0
BLAST of CaUC06G117510 vs. ExPASy Swiss-Prot
Match: Q9XFB0 (Putative axial regulator YABBY 2 OS=Arabidopsis thaliana OX=3702 GN=YAB2 PE=1 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 1.0e-35 Identity = 98/230 (42.61%), Postives = 118/230 (51.30%), Query Frame = 0
BLAST of CaUC06G117510 vs. ExPASy Swiss-Prot
Match: Q2QM17 (Protein YABBY 6 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB6 PE=2 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 1.9e-34 Identity = 99/225 (44.00%), Postives = 121/225 (53.78%), Query Frame = 0
BLAST of CaUC06G117510 vs. ExPASy Swiss-Prot
Match: A2X7Q3 (Protein YABBY 4 OS=Oryza sativa subsp. indica OX=39946 GN=YAB4 PE=3 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 4.7e-33 Identity = 100/270 (37.04%), Postives = 122/270 (45.19%), Query Frame = 0
BLAST of CaUC06G117510 vs. ExPASy TrEMBL
Match: A0A6J1KTI6 (axial regulator YABBY 5-like OS=Cucurbita maxima OX=3661 GN=LOC111497478 PE=3 SV=1) HSP 1 Score: 337.8 bits (865), Expect = 3.7e-89 Identity = 174/239 (72.80%), Postives = 181/239 (75.73%), Query Frame = 0
BLAST of CaUC06G117510 vs. ExPASy TrEMBL
Match: A0A1S4DUX7 (axial regulator YABBY 5-like OS=Cucumis melo OX=3656 GN=LOC103487499 PE=3 SV=1) HSP 1 Score: 337.0 bits (863), Expect = 6.3e-89 Identity = 166/178 (93.26%), Postives = 172/178 (96.63%), Query Frame = 0
BLAST of CaUC06G117510 vs. ExPASy TrEMBL
Match: A0A6J1CSS6 (axial regulator YABBY 5-like OS=Momordica charantia OX=3673 GN=LOC111014425 PE=3 SV=1) HSP 1 Score: 333.6 bits (854), Expect = 7.0e-88 Identity = 178/240 (74.17%), Postives = 182/240 (75.83%), Query Frame = 0
BLAST of CaUC06G117510 vs. ExPASy TrEMBL
Match: A0A6J1F4T3 (axial regulator YABBY 5-like OS=Cucurbita moschata OX=3662 GN=LOC111440865 PE=3 SV=1) HSP 1 Score: 331.3 bits (848), Expect = 3.5e-87 Identity = 173/239 (72.38%), Postives = 180/239 (75.31%), Query Frame = 0
BLAST of CaUC06G117510 vs. ExPASy TrEMBL
Match: A0A6P5XRM3 (axial regulator YABBY 5-like OS=Durio zibethinus OX=66656 GN=LOC111285610 PE=3 SV=1) HSP 1 Score: 288.1 bits (736), Expect = 3.4e-74 Identity = 154/240 (64.17%), Postives = 166/240 (69.17%), Query Frame = 0
BLAST of CaUC06G117510 vs. TAIR 10
Match: AT2G26580.1 (plant-specific transcription factor YABBY family protein ) HSP 1 Score: 218.0 bits (554), Expect = 8.2e-57 Identity = 120/218 (55.05%), Postives = 136/218 (62.39%), Query Frame = 0
BLAST of CaUC06G117510 vs. TAIR 10
Match: AT2G26580.2 (plant-specific transcription factor YABBY family protein ) HSP 1 Score: 218.0 bits (554), Expect = 8.2e-57 Identity = 120/218 (55.05%), Postives = 136/218 (62.39%), Query Frame = 0
BLAST of CaUC06G117510 vs. TAIR 10
Match: AT1G08465.1 (Plant-specific transcription factor YABBY family protein ) HSP 1 Score: 151.8 bits (382), Expect = 7.2e-37 Identity = 98/230 (42.61%), Postives = 118/230 (51.30%), Query Frame = 0
BLAST of CaUC06G117510 vs. TAIR 10
Match: AT4G00180.2 (Plant-specific transcription factor YABBY family protein ) HSP 1 Score: 133.3 bits (334), Expect = 2.7e-31 Identity = 87/195 (44.62%), Postives = 106/195 (54.36%), Query Frame = 0
BLAST of CaUC06G117510 vs. TAIR 10
Match: AT4G00180.1 (Plant-specific transcription factor YABBY family protein ) HSP 1 Score: 131.3 bits (329), Expect = 1.0e-30 Identity = 86/194 (44.33%), Postives = 105/194 (54.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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