CaUC06G113600 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC06G113600
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	RING-H2 finger protein ATL16
Location	Ciama_Chr06: 8577168 .. 8578088 (-)
RNA-Seq Expression	CaUC06G113600
Synteny	CaUC06G113600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCAAGCCCTCATCTCTCCCTCCACCAGTCCCCTTCATTCTTCCAACTCTGTTTCCAGTTTTCCGATCATCGCCGTCGCCGTCATCGGAATCTGCGCCACCGCGTTTTTACTCGTTAGCTATTACATCTTCGTCATAAAATGCTGTCTCAACTGGCAACGAATAGAAATCCTCCGCCGGTTTTCTCTCTCCCGCCGCCGTGAAGAGACTTTAATACTCCGGCAGCCAGCAGAGCCACGTGGGTTAGACCCATCAACGATCCAATCAATCCCACTGATTAATTACAAAAAACCCACTTATGAAACTACCAGCGGCGGCGAATGCGCCGTTTGTCTGACGGAGTTTCAAACGGAGGAGCAATTGAGAAAAATTCCGATTTGTAGCCATCTCTTTCATATTGATTGCATCGACATTTGGCTTCAGAATAATTCCAATTGCCCACTTTGCAGAACCTCAATCTCAGCTCCAAATTGGCTGATTCCAACCGATCAAGCCCCTCCCCCTCGAGATTCGGCCCTCAATACGGGCAGCCCCATTTCTGCCGCCGATGAGAATTTCGTTGTGATTGAACTGGGTCGGAATCTCGATCGCCGCGGTCCTCCGGCGTTGGGGTCCGGCGATGCAGCGGAATCGAAGAGGAAGTTTAAGAAGGTTACGAGTATGGGGGATGAATGTATTGACATTAGGGAGAAGGATGAGGAGTTTATAGTGCAGCCGATTAGAAGATCGTTTTCGATGGATTCATCTGGCGACCGGCAGCTATATATGGCGGTGCAAGCGGCGGTGCGGCAGAAGAGTGGCGGTGAGAATGGGGTTGAGGTTGAGGGTTGCAGTAGCAGAGTACGAAGATCTTTCTTTTCTTTTGGGAGTGGCAGAGGATCTAGAAATGCAGTTTTGCCCATTCAATTTCAACCTTAA

mRNA sequence

ATGGCCCAAGCCCTCATCTCTCCCTCCACCAGTCCCCTTCATTCTTCCAACTCTGTTTCCAGTTTTCCGATCATCGCCGTCGCCGTCATCGGAATCTGCGCCACCGCGTTTTTACTCGTTAGCTATTACATCTTCGTCATAAAATGCTGTCTCAACTGGCAACGAATAGAAATCCTCCGCCGGTTTTCTCTCTCCCGCCGCCGTGAAGAGACTTTAATACTCCGGCAGCCAGCAGAGCCACGTGGGTTAGACCCATCAACGATCCAATCAATCCCACTGATTAATTACAAAAAACCCACTTATGAAACTACCAGCGGCGGCGAATGCGCCGTTTGTCTGACGGAGTTTCAAACGGAGGAGCAATTGAGAAAAATTCCGATTTGTAGCCATCTCTTTCATATTGATTGCATCGACATTTGGCTTCAGAATAATTCCAATTGCCCACTTTGCAGAACCTCAATCTCAGCTCCAAATTGGCTGATTCCAACCGATCAAGCCCCTCCCCCTCGAGATTCGGCCCTCAATACGGGCAGCCCCATTTCTGCCGCCGATGAGAATTTCGTTGTGATTGAACTGGGTCGGAATCTCGATCGCCGCGGTCCTCCGGCGTTGGGGTCCGGCGATGCAGCGGAATCGAAGAGGAAGTTTAAGAAGGTTACGAGTATGGGGGATGAATGTATTGACATTAGGGAGAAGGATGAGGAGTTTATAGTGCAGCCGATTAGAAGATCGTTTTCGATGGATTCATCTGGCGACCGGCAGCTATATATGGCGGTGCAAGCGGCGGTGCGGCAGAAGAGTGGCGGTGAGAATGGGGTTGAGGTTGAGGGTTGCAGTAGCAGAGTACGAAGATCTTTCTTTTCTTTTGGGAGTGGCAGAGGATCTAGAAATGCAGTTTTGCCCATTCAATTTCAACCTTAA

Coding sequence (CDS)

ATGGCCCAAGCCCTCATCTCTCCCTCCACCAGTCCCCTTCATTCTTCCAACTCTGTTTCCAGTTTTCCGATCATCGCCGTCGCCGTCATCGGAATCTGCGCCACCGCGTTTTTACTCGTTAGCTATTACATCTTCGTCATAAAATGCTGTCTCAACTGGCAACGAATAGAAATCCTCCGCCGGTTTTCTCTCTCCCGCCGCCGTGAAGAGACTTTAATACTCCGGCAGCCAGCAGAGCCACGTGGGTTAGACCCATCAACGATCCAATCAATCCCACTGATTAATTACAAAAAACCCACTTATGAAACTACCAGCGGCGGCGAATGCGCCGTTTGTCTGACGGAGTTTCAAACGGAGGAGCAATTGAGAAAAATTCCGATTTGTAGCCATCTCTTTCATATTGATTGCATCGACATTTGGCTTCAGAATAATTCCAATTGCCCACTTTGCAGAACCTCAATCTCAGCTCCAAATTGGCTGATTCCAACCGATCAAGCCCCTCCCCCTCGAGATTCGGCCCTCAATACGGGCAGCCCCATTTCTGCCGCCGATGAGAATTTCGTTGTGATTGAACTGGGTCGGAATCTCGATCGCCGCGGTCCTCCGGCGTTGGGGTCCGGCGATGCAGCGGAATCGAAGAGGAAGTTTAAGAAGGTTACGAGTATGGGGGATGAATGTATTGACATTAGGGAGAAGGATGAGGAGTTTATAGTGCAGCCGATTAGAAGATCGTTTTCGATGGATTCATCTGGCGACCGGCAGCTATATATGGCGGTGCAAGCGGCGGTGCGGCAGAAGAGTGGCGGTGAGAATGGGGTTGAGGTTGAGGGTTGCAGTAGCAGAGTACGAAGATCTTTCTTTTCTTTTGGGAGTGGCAGAGGATCTAGAAATGCAGTTTTGCCCATTCAATTTCAACCTTAA

Protein sequence

MAQALISPSTSPLHSSNSVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILRRFSLSRRREETLILRQPAEPRGLDPSTIQSIPLINYKKPTYETTSGGECAVCLTEFQTEEQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISAPNWLIPTDQAPPPRDSALNTGSPISAADENFVVIELGRNLDRRGPPALGSGDAAESKRKFKKVTSMGDECIDIREKDEEFIVQPIRRSFSMDSSGDRQLYMAVQAAVRQKSGGENGVEVEGCSSRVRRSFFSFGSGRGSRNAVLPIQFQP

Homology

[Close]

BLAST of CaUC06G113600 vs. NCBI nr
Match: XP_038875603.1 (RING-H2 finger protein ATL16-like [Benincasa hispida])

HSP 1 Score: 557.8 bits (1436), Expect = 6.0e-155
Identity = 283/306 (92.48%), Postives = 290/306 (94.77%), Query Frame = 0


Query: 1   MAQALISPSTSPLHSSNSVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60
           MAQ LISPSTSPLHSSN VSSFPIIAVAVIGICATAFLLV+YY+FVIKCCLNWQRIEILR
Sbjct: 1   MAQTLISPSTSPLHSSNPVSSFPIIAVAVIGICATAFLLVTYYVFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPAEPRGLDPSTIQSIPLINYKKPTYETTSGGECAVCLTEFQTEE 120
           RFSLSRRREETLILRQPAEPRGLDPSTIQSIPLI+YKKP  ETTSGGECAVCLTEFQTEE
Sbjct: 61  RFSLSRRREETLILRQPAEPRGLDPSTIQSIPLISYKKPINETTSGGECAVCLTEFQTEE 120

Query: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISAPNWLIPTDQAPPPRDSALNTGSPI 180
           QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISA NWLIPTDQAP P+D  LNTGS I
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISAQNWLIPTDQAPSPQDLGLNTGSHI 180

Query: 181 SAADENFVVIELGRNLDRRGPPALGSGDAAESKRKFKKVTSMGDECIDIREKDEEFIVQP 240
           S ADENFVVIELGRNLDRR  PALGS +AAES RKFKKVTSMGDECID+REKDEEFIVQP
Sbjct: 181 SVADENFVVIELGRNLDRRRHPALGSSEAAESGRKFKKVTSMGDECIDMREKDEEFIVQP 240

Query: 241 IRRSFSMDSSGDRQLYMAVQAAVRQKSGGENGVEVEGCSSRVRRSFFSFGSGRGSRNAVL 300
           IRRSFSMDSSGDRQLYMAVQAAVR+K  GENGVEVEGCSSRVRRSFFSFGSGRGSRNAVL
Sbjct: 241 IRRSFSMDSSGDRQLYMAVQAAVREKGDGENGVEVEGCSSRVRRSFFSFGSGRGSRNAVL 300

Query: 301 PIQFQP 307
           PIQFQP
Sbjct: 301 PIQFQP 306

[Close]

BLAST of CaUC06G113600 vs. NCBI nr
Match: XP_008460634.1 (PREDICTED: RING-H2 finger protein ATL16 [Cucumis melo] >KAA0065677.1 RING-H2 finger protein ATL16 [Cucumis melo var. makuwa] >TYK08225.1 RING-H2 finger protein ATL16 [Cucumis melo var. makuwa])

HSP 1 Score: 548.5 bits (1412), Expect = 3.6e-152
Identity = 279/306 (91.18%), Postives = 288/306 (94.12%), Query Frame = 0


Query: 1   MAQALISPSTSPLHSSNSVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60
           MAQ LISPSTSPLHSSN VSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR
Sbjct: 1   MAQPLISPSTSPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPAEPRGLDPSTIQSIPLINYKKPTYETTSGGECAVCLTEFQTEE 120
           RFSLSRRRE+TLILRQ AEPRGLDPS IQSIPLINYKKP  ETT+GGECAVCLTEFQTEE
Sbjct: 61  RFSLSRRREDTLILRQQAEPRGLDPSIIQSIPLINYKKPIGETTTGGECAVCLTEFQTEE 120

Query: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISAPNWLIPTDQAPPPRDSALNTGSPI 180
           QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSIS  NWLIPTDQAP  RD ALNTG PI
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTDQAPSRRDLALNTGIPI 180

Query: 181 SAADENFVVIELGRNLDRRGPPALGSGDAAESKRKFKKVTSMGDECIDIREKDEEFIVQP 240
           SA DENFVVIELG NLDRR PP L SG+ A+S+RKFKKVTSMGDECI++REKDEEFIVQP
Sbjct: 181 SAGDENFVVIELGGNLDRRQPPGLVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQP 240

Query: 241 IRRSFSMDSSGDRQLYMAVQAAVRQKSGGENGVEVEGCSSRVRRSFFSFGSGRGSRNAVL 300
           IRRSFSMDSSGDRQLYMAVQAAVR+KSGGENGVEVEGCSSRV+RSFFSFGSGRGSRNAVL
Sbjct: 241 IRRSFSMDSSGDRQLYMAVQAAVREKSGGENGVEVEGCSSRVKRSFFSFGSGRGSRNAVL 300

Query: 301 PIQFQP 307
           PIQFQP
Sbjct: 301 PIQFQP 306

[Close]

BLAST of CaUC06G113600 vs. NCBI nr
Match: XP_004142260.1 (RING-H2 finger protein ATL16 [Cucumis sativus])

HSP 1 Score: 536.2 bits (1380), Expect = 1.9e-148
Identity = 275/307 (89.58%), Postives = 287/307 (93.49%), Query Frame = 0


Query: 1   MAQALISPSTSPLHSSNSVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60
           MAQ LISPST+PLHSSN VSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR
Sbjct: 1   MAQPLISPSTTPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPAEPRGLDPSTIQSIPLINYKKPTYE-TTSGGECAVCLTEFQTE 120
           RFSLSRRRE+TLILRQ AEPRGLDPSTIQSIPLINYKKP  E TT+GGECAVCLTEFQTE
Sbjct: 61  RFSLSRRREQTLILRQQAEPRGLDPSTIQSIPLINYKKPINETTTTGGECAVCLTEFQTE 120

Query: 121 EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISAPNWLIPTDQAPPPRDSALNTGSP 180
           EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSIS  NWLIPT+QAP  RD ALNT  P
Sbjct: 121 EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTNQAPSARDLALNTSIP 180

Query: 181 ISAADENFVVIELGRNLDRRGPPALGSGDAAESKRKFKKVTSMGDECIDIREKDEEFIVQ 240
           ISA DENFVVIELG NLDR  PP L SG+ A+S+RKFKKVTSMGDECI++REKDEEFIVQ
Sbjct: 181 ISAGDENFVVIELGGNLDRCRPPELVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQ 240

Query: 241 PIRRSFSMDSSGDRQLYMAVQAAVRQKSGGENGVEVEGCSSRVRRSFFSFGSGRGSRNAV 300
           PIRRSFSMDSSGDRQLYMAVQAAVR+KSGGE+GVEVEGCSSRV+RSFFSFGSGRGSRNAV
Sbjct: 241 PIRRSFSMDSSGDRQLYMAVQAAVREKSGGESGVEVEGCSSRVKRSFFSFGSGRGSRNAV 300

Query: 301 LPIQFQP 307
           LPIQFQP
Sbjct: 301 LPIQFQP 307

[Close]

BLAST of CaUC06G113600 vs. NCBI nr
Match: XP_023006323.1 (RING-H2 finger protein ATL16-like [Cucurbita maxima])

HSP 1 Score: 499.2 bits (1284), Expect = 2.5e-137
Identity = 257/308 (83.44%), Postives = 268/308 (87.01%), Query Frame = 0


Query: 1   MAQALISPSTSPLHSSNSVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60
           M + LISPS +PLHSS SVSSFPIIAVAVIGICATAFLLV YYIFVIKCCLNWQRIEILR
Sbjct: 1   MEKPLISPSATPLHSSTSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPAEPRGLDPSTIQSIPLINYKKPTYETTSGGECAVCLTEFQTEE 120
           RFSLSRRREETLILRQPA+PRGLDPSTIQSIPLINYKKP  ET SGGECAVCLTEF+ EE
Sbjct: 61  RFSLSRRREETLILRQPADPRGLDPSTIQSIPLINYKKPIKETASGGECAVCLTEFRPEE 120

Query: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISAPNWLIPTDQAPPPRDSALNTGSPI 180
           QLRKIPICSHLFHIDCIDIWLQNN NCPLCRTSISA NWLIP DQAP PRD ALN+GS +
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPVDQAPSPRDLALNSGSSV 180

Query: 181 SA--ADENFVVIELGRNLDRRGPPALGSGDAAESKRKFKKVTSMGDECIDIREKDEEFIV 240
            A  ADENFVVIELGRN DRR PP  G            KVTSMGDECID+REKD+EF+V
Sbjct: 181 DATTADENFVVIELGRNPDRRRPPPFG------------KVTSMGDECIDMREKDKEFLV 240

Query: 241 QPIRRSFSMDSSGDRQLYMAVQAAVRQKSGGENGVEVEGCSSRVRRSFFSFGSGRGSRNA 300
           QPIRRSFSMDSSGDRQLYMAVQAAVRQ  GGE+ VE EGCS+RVRRSFFSFGSGRGSRN 
Sbjct: 241 QPIRRSFSMDSSGDRQLYMAVQAAVRQSGGGESRVEAEGCSNRVRRSFFSFGSGRGSRNG 296

Query: 301 VLPIQFQP 307
           VLPIQ QP
Sbjct: 301 VLPIQLQP 296

[Close]

BLAST of CaUC06G113600 vs. NCBI nr
Match: XP_022958779.1 (RING-H2 finger protein ATL16-like [Cucurbita moschata])

HSP 1 Score: 492.3 bits (1266), Expect = 3.1e-135
Identity = 253/308 (82.14%), Postives = 267/308 (86.69%), Query Frame = 0


Query: 1   MAQALISPSTSPLHSSNSVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60
           M + LISPS +P HSS +VSSFPIIAVAVIGICATAFLLV YYIFVIKCCLNWQRIEILR
Sbjct: 1   MEKPLISPSATPPHSSTAVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPAEPRGLDPSTIQSIPLINYKKPTYETTSGGECAVCLTEFQTEE 120
           RFSLSRRREETLILRQP EPRGLDPSTIQSIPLINYKKP  ET+SGGECAVCLTEFQ EE
Sbjct: 61  RFSLSRRREETLILRQPVEPRGLDPSTIQSIPLINYKKPIKETSSGGECAVCLTEFQPEE 120

Query: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISAPNWLIPTDQAPPPRDSALNTGSPI 180
           QLRKIPICSHLFHIDCIDIWLQNN NCPLCRTSISA NWLIP DQAP PRD  LN+GS +
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPIDQAPSPRDLPLNSGSSV 180

Query: 181 SA--ADENFVVIELGRNLDRRGPPALGSGDAAESKRKFKKVTSMGDECIDIREKDEEFIV 240
           +A  +DENFVVIELGRN DRR PP  G            KVTSMGDECID+REKD+EF+V
Sbjct: 181 AATTSDENFVVIELGRNPDRRRPPPFG------------KVTSMGDECIDMREKDKEFLV 240

Query: 241 QPIRRSFSMDSSGDRQLYMAVQAAVRQKSGGENGVEVEGCSSRVRRSFFSFGSGRGSRNA 300
           QPIRRSFSMDSSGDRQLYMAVQAAV+Q  GGE+ VE EGCS+RVRRSFFSFGSGRGSRN 
Sbjct: 241 QPIRRSFSMDSSGDRQLYMAVQAAVQQSGGGESRVEAEGCSNRVRRSFFSFGSGRGSRNG 296

Query: 301 VLPIQFQP 307
           VLPIQ QP
Sbjct: 301 VLPIQLQP 296

[Close]

BLAST of CaUC06G113600 vs. ExPASy Swiss-Prot
Match: Q9LSW9 (RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.0e-69
Identity = 170/353 (48.16%), Postives = 212/353 (60.06%), Query Frame = 0


Query: 15  SSNSVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILRRFSLSRRR---EET 74
           +S++ +SFPI+AVAVIGI ATAFLLVSYY+FVIKCCLNW RI+IL RFSLSRRR   ++ 
Sbjct: 27  ASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSLSRRRRNDQDP 86

Query: 75  LILRQP-AEPRGLDPSTIQSIPLINYKKPTYETTSG--------------GECAVCLTEF 134
           L++  P    RGLD S I++IP+  +KK  Y+   G               EC+VCL+EF
Sbjct: 87  LMVYSPELRSRGLDESVIRAIPIFKFKK-RYDQNDGVFTGEGEEEEEKRSQECSVCLSEF 146

Query: 135 QTEEQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISAPNWLIPTDQAPPPRDSALNT 194
           Q EE+LR IP CSHLFHIDCID+WLQNN+NCPLCRT +S  +   P D+   P  S  N 
Sbjct: 147 QDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSC-DTSFPPDRVSAPSTSPENL 206

Query: 195 GSPISAADENFVVIELG------RNLDRRG--------------------------PPAL 254
              +   +  +VVIELG      R+  R G                          P  L
Sbjct: 207 --VMLRGENEYVVIELGSSIGSDRDSPRHGRLLTGQERSNSGYLLNENTQNSISPSPKKL 266

Query: 255 GSGDAAESKRKFKKVTSMGDECIDIRE-KDEEF-IVQPIRRSFSMDSSGDRQLYMAVQAA 307
             G      RK  K+TSMGDECIDIR  KDE+F  +QPIRRS SMDSS DRQLY+AVQ A
Sbjct: 267 DRGGLPRKFRKLHKMTSMGDECIDIRRGKDEQFGSIQPIRRSISMDSSADRQLYLAVQEA 326

[Close]

BLAST of CaUC06G113600 vs. ExPASy Swiss-Prot
Match: P93823 (RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 6.0e-65
Identity = 163/358 (45.53%), Postives = 215/358 (60.06%), Query Frame = 0


Query: 10  TSPL--HSSNSVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILRRFSLSRR 69
           TSP+   +S+S ++FPI+A+AVIGI ATAFLLVSYYIFVIKCCLNW +I+I RR   S  
Sbjct: 27  TSPIFPRTSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQIDIFRRRRRSSD 86

Query: 70  REETLILRQPAEPRGLDPSTIQSIPLINYKKPTY------ETTSGGECAVCLTEFQTEEQ 129
           +   +I       RGLD S I++IP+  +KK         ++ +  EC+VCL EFQ +E+
Sbjct: 87  QNPLMIYSPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEK 146

Query: 130 LRKIPICSHLFHIDCIDIWLQNNSNCPLCRTS-----------ISAPNWLIPTDQAPPPR 189
           LR IP C H+FHIDCIDIWLQ N+NCPLCRTS           ISAP+   P + +P  R
Sbjct: 147 LRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLISAPS--SPRENSPHSR 206

Query: 190 DSALNTGSPISAADENFVVIELG----------RNLD------RRGPPALGSGDAAES-- 249
           +  L  G  +   D++FVVIELG          RN+D      R     + +G++ +S  
Sbjct: 207 NRNLEPGL-VLGGDDDFVVIELGASNGNNRESVRNIDFLTEQERVTSNEVSTGNSPKSVS 266

Query: 250 --------------KRKFKKVTSMGDECIDIREKDEEF-IVQPIRRSFSMDSSGDRQLYM 307
                         +RKF KVTSMGDECID R KD  F  +QPIRRS SMDSS DRQLY+
Sbjct: 267 PLPIKFGNRGMYKKERKFHKVTSMGDECIDTRGKDGHFGEIQPIRRSISMDSSVDRQLYL 326

[Close]

BLAST of CaUC06G113600 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.5e-20
Identity = 57/146 (39.04%), Postives = 82/146 (56.16%), Query Frame = 0


Query: 15  SSNSVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILRRFSLSRRREETLIL 74
           SS+S SSF  + +A+IGI  +A +LVSYY  + K C    +       +L+   E     
Sbjct: 47  SSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSS 106

Query: 75  RQPAEPR--GLDPSTIQSIPLINYKKPTYETTSGGECAVCLTEFQTEEQLRKIPICSHLF 134
            Q       GL+ S I+SI +  YK        G +C+VCL+EF+  E LR +P C+H F
Sbjct: 107 TQRISTNGDGLNESMIKSITVYKYKSGD-GFVDGSDCSVCLSEFEENESLRLLPKCNHAF 166

Query: 135 HIDCIDIWLQNNSNCPLCRTSISAPN 159
           H+ CID WL+++SNCPLCR  ++  N
Sbjct: 167 HLPCIDTWLKSHSNCPLCRAFVTGVN 191

[Close]

BLAST of CaUC06G113600 vs. ExPASy Swiss-Prot
Match: P0C041 (Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 PE=3 SV=2)

HSP 1 Score: 97.8 bits (242), Expect = 2.2e-19
Identity = 62/178 (34.83%), Postives = 91/178 (51.12%), Query Frame = 0


Query: 25  IAVAVIGICATAFLLVSYYIFVIKCCLN---------WQRIEILRRFSLSRRREETLILR 84
           + +A+ GI ATAFLL +YY  V K C N           R +I+   +   R ++     
Sbjct: 61  LVIAIFGIFATAFLLAAYYTLVSKYCANDTTNEAASESGRSDIILDVNSPERGDQDDPFA 120

Query: 85  QPAEPRGLDPSTIQSIPLINYKK-PTYETTSGGECAVCLTEFQTEEQLRKIPICSHLFHI 144
             +   GLD + I+ I     KK       +G +C++CL EF  +E LR +P C+H FH+
Sbjct: 121 LESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHV 180

Query: 145 DCIDIWLQNNSNCPLCRTSISAPNWLIPTDQAPPPRDSALNTG---SPISAADENFVV 190
            CID WL+++SNCPLCR  I     ++PT Q P      +N     S + +A+ N VV
Sbjct: 181 VCIDRWLKSHSNCPLCRAKI-----IVPTTQQPEHHVVVMNLDRFTSNVGSAEGNVVV 233

[Close]

BLAST of CaUC06G113600 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 95.9 bits (237), Expect = 8.4e-19
Identity = 81/255 (31.76%), Postives = 118/255 (46.27%), Query Frame = 0


Query: 17  NSVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQR------IEILRRFSLSRRREE 76
           +S S F  + +A+IGI A+AF+LVSYY  + K C   +          + R S     + 
Sbjct: 51  SSSSDFSPLLIALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQG 110

Query: 77  TLILRQPAEPR-----------GLDPSTIQSIPLINYKKPTYETTSGGECAVCLTEFQTE 136
           T                     GLD S I+SI +  Y+K      S  +C+VCL+EFQ  
Sbjct: 111 TNNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVES-SDCSVCLSEFQEN 170

Query: 137 EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSI---SAPNWLIPTDQAPPPRDSALNT 196
           E LR +P C+H FH+ CID WL+++SNCPLCR  I   SA   +  T+Q     +++++T
Sbjct: 171 ESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDLTNQQIVTENNSIST 230

Query: 197 GSPISAADENFVVIELGRNLDRRGPPALGSGDAAESKRKFKKVTSMGDECIDIREKDEEF 252
           G      D++ VV+ L     R     +  G            T    E  D R+ +E  
Sbjct: 231 G------DDSVVVVNLDLENSRSRNETVNEGS-----------TPKPPEMQDSRDGEE-- 280

[Close]

BLAST of CaUC06G113600 vs. ExPASy TrEMBL
Match: A0A5A7VEZ8 (RING-H2 finger protein ATL16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1503G00490 PE=4 SV=1)

HSP 1 Score: 548.5 bits (1412), Expect = 1.8e-152
Identity = 279/306 (91.18%), Postives = 288/306 (94.12%), Query Frame = 0


Query: 1   MAQALISPSTSPLHSSNSVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60
           MAQ LISPSTSPLHSSN VSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR
Sbjct: 1   MAQPLISPSTSPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPAEPRGLDPSTIQSIPLINYKKPTYETTSGGECAVCLTEFQTEE 120
           RFSLSRRRE+TLILRQ AEPRGLDPS IQSIPLINYKKP  ETT+GGECAVCLTEFQTEE
Sbjct: 61  RFSLSRRREDTLILRQQAEPRGLDPSIIQSIPLINYKKPIGETTTGGECAVCLTEFQTEE 120

Query: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISAPNWLIPTDQAPPPRDSALNTGSPI 180
           QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSIS  NWLIPTDQAP  RD ALNTG PI
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTDQAPSRRDLALNTGIPI 180

Query: 181 SAADENFVVIELGRNLDRRGPPALGSGDAAESKRKFKKVTSMGDECIDIREKDEEFIVQP 240
           SA DENFVVIELG NLDRR PP L SG+ A+S+RKFKKVTSMGDECI++REKDEEFIVQP
Sbjct: 181 SAGDENFVVIELGGNLDRRQPPGLVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQP 240

Query: 241 IRRSFSMDSSGDRQLYMAVQAAVRQKSGGENGVEVEGCSSRVRRSFFSFGSGRGSRNAVL 300
           IRRSFSMDSSGDRQLYMAVQAAVR+KSGGENGVEVEGCSSRV+RSFFSFGSGRGSRNAVL
Sbjct: 241 IRRSFSMDSSGDRQLYMAVQAAVREKSGGENGVEVEGCSSRVKRSFFSFGSGRGSRNAVL 300

Query: 301 PIQFQP 307
           PIQFQP
Sbjct: 301 PIQFQP 306

[Close]

BLAST of CaUC06G113600 vs. ExPASy TrEMBL
Match: A0A1S3CD01 (RING-H2 finger protein ATL16 OS=Cucumis melo OX=3656 GN=LOC103499411 PE=4 SV=1)

HSP 1 Score: 548.5 bits (1412), Expect = 1.8e-152
Identity = 279/306 (91.18%), Postives = 288/306 (94.12%), Query Frame = 0


Query: 1   MAQALISPSTSPLHSSNSVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60
           MAQ LISPSTSPLHSSN VSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR
Sbjct: 1   MAQPLISPSTSPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPAEPRGLDPSTIQSIPLINYKKPTYETTSGGECAVCLTEFQTEE 120
           RFSLSRRRE+TLILRQ AEPRGLDPS IQSIPLINYKKP  ETT+GGECAVCLTEFQTEE
Sbjct: 61  RFSLSRRREDTLILRQQAEPRGLDPSIIQSIPLINYKKPIGETTTGGECAVCLTEFQTEE 120

Query: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISAPNWLIPTDQAPPPRDSALNTGSPI 180
           QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSIS  NWLIPTDQAP  RD ALNTG PI
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTDQAPSRRDLALNTGIPI 180

Query: 181 SAADENFVVIELGRNLDRRGPPALGSGDAAESKRKFKKVTSMGDECIDIREKDEEFIVQP 240
           SA DENFVVIELG NLDRR PP L SG+ A+S+RKFKKVTSMGDECI++REKDEEFIVQP
Sbjct: 181 SAGDENFVVIELGGNLDRRQPPGLVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQP 240

Query: 241 IRRSFSMDSSGDRQLYMAVQAAVRQKSGGENGVEVEGCSSRVRRSFFSFGSGRGSRNAVL 300
           IRRSFSMDSSGDRQLYMAVQAAVR+KSGGENGVEVEGCSSRV+RSFFSFGSGRGSRNAVL
Sbjct: 241 IRRSFSMDSSGDRQLYMAVQAAVREKSGGENGVEVEGCSSRVKRSFFSFGSGRGSRNAVL 300

Query: 301 PIQFQP 307
           PIQFQP
Sbjct: 301 PIQFQP 306

[Close]

BLAST of CaUC06G113600 vs. ExPASy TrEMBL
Match: A0A0A0LNP5 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G178720 PE=4 SV=1)

HSP 1 Score: 536.2 bits (1380), Expect = 9.0e-149
Identity = 275/307 (89.58%), Postives = 287/307 (93.49%), Query Frame = 0


Query: 1   MAQALISPSTSPLHSSNSVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60
           MAQ LISPST+PLHSSN VSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR
Sbjct: 1   MAQPLISPSTTPLHSSNPVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPAEPRGLDPSTIQSIPLINYKKPTYE-TTSGGECAVCLTEFQTE 120
           RFSLSRRRE+TLILRQ AEPRGLDPSTIQSIPLINYKKP  E TT+GGECAVCLTEFQTE
Sbjct: 61  RFSLSRRREQTLILRQQAEPRGLDPSTIQSIPLINYKKPINETTTTGGECAVCLTEFQTE 120

Query: 121 EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISAPNWLIPTDQAPPPRDSALNTGSP 180
           EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSIS  NWLIPT+QAP  RD ALNT  P
Sbjct: 121 EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISNQNWLIPTNQAPSARDLALNTSIP 180

Query: 181 ISAADENFVVIELGRNLDRRGPPALGSGDAAESKRKFKKVTSMGDECIDIREKDEEFIVQ 240
           ISA DENFVVIELG NLDR  PP L SG+ A+S+RKFKKVTSMGDECI++REKDEEFIVQ
Sbjct: 181 ISAGDENFVVIELGGNLDRCRPPELVSGEVAKSERKFKKVTSMGDECINMREKDEEFIVQ 240

Query: 241 PIRRSFSMDSSGDRQLYMAVQAAVRQKSGGENGVEVEGCSSRVRRSFFSFGSGRGSRNAV 300
           PIRRSFSMDSSGDRQLYMAVQAAVR+KSGGE+GVEVEGCSSRV+RSFFSFGSGRGSRNAV
Sbjct: 241 PIRRSFSMDSSGDRQLYMAVQAAVREKSGGESGVEVEGCSSRVKRSFFSFGSGRGSRNAV 300

Query: 301 LPIQFQP 307
           LPIQFQP
Sbjct: 301 LPIQFQP 307

[Close]

BLAST of CaUC06G113600 vs. ExPASy TrEMBL
Match: A0A6J1L4L0 (RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111499094 PE=4 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 1.2e-137
Identity = 257/308 (83.44%), Postives = 268/308 (87.01%), Query Frame = 0


Query: 1   MAQALISPSTSPLHSSNSVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60
           M + LISPS +PLHSS SVSSFPIIAVAVIGICATAFLLV YYIFVIKCCLNWQRIEILR
Sbjct: 1   MEKPLISPSATPLHSSTSVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPAEPRGLDPSTIQSIPLINYKKPTYETTSGGECAVCLTEFQTEE 120
           RFSLSRRREETLILRQPA+PRGLDPSTIQSIPLINYKKP  ET SGGECAVCLTEF+ EE
Sbjct: 61  RFSLSRRREETLILRQPADPRGLDPSTIQSIPLINYKKPIKETASGGECAVCLTEFRPEE 120

Query: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISAPNWLIPTDQAPPPRDSALNTGSPI 180
           QLRKIPICSHLFHIDCIDIWLQNN NCPLCRTSISA NWLIP DQAP PRD ALN+GS +
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPVDQAPSPRDLALNSGSSV 180

Query: 181 SA--ADENFVVIELGRNLDRRGPPALGSGDAAESKRKFKKVTSMGDECIDIREKDEEFIV 240
            A  ADENFVVIELGRN DRR PP  G            KVTSMGDECID+REKD+EF+V
Sbjct: 181 DATTADENFVVIELGRNPDRRRPPPFG------------KVTSMGDECIDMREKDKEFLV 240

Query: 241 QPIRRSFSMDSSGDRQLYMAVQAAVRQKSGGENGVEVEGCSSRVRRSFFSFGSGRGSRNA 300
           QPIRRSFSMDSSGDRQLYMAVQAAVRQ  GGE+ VE EGCS+RVRRSFFSFGSGRGSRN 
Sbjct: 241 QPIRRSFSMDSSGDRQLYMAVQAAVRQSGGGESRVEAEGCSNRVRRSFFSFGSGRGSRNG 296

Query: 301 VLPIQFQP 307
           VLPIQ QP
Sbjct: 301 VLPIQLQP 296

[Close]

BLAST of CaUC06G113600 vs. ExPASy TrEMBL
Match: A0A6J1H640 (RING-H2 finger protein ATL16-like OS=Cucurbita moschata OX=3662 GN=LOC111459948 PE=4 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 1.5e-135
Identity = 253/308 (82.14%), Postives = 267/308 (86.69%), Query Frame = 0


Query: 1   MAQALISPSTSPLHSSNSVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILR 60
           M + LISPS +P HSS +VSSFPIIAVAVIGICATAFLLV YYIFVIKCCLNWQRIEILR
Sbjct: 1   MEKPLISPSATPPHSSTAVSSFPIIAVAVIGICATAFLLVGYYIFVIKCCLNWQRIEILR 60

Query: 61  RFSLSRRREETLILRQPAEPRGLDPSTIQSIPLINYKKPTYETTSGGECAVCLTEFQTEE 120
           RFSLSRRREETLILRQP EPRGLDPSTIQSIPLINYKKP  ET+SGGECAVCLTEFQ EE
Sbjct: 61  RFSLSRRREETLILRQPVEPRGLDPSTIQSIPLINYKKPIKETSSGGECAVCLTEFQPEE 120

Query: 121 QLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISAPNWLIPTDQAPPPRDSALNTGSPI 180
           QLRKIPICSHLFHIDCIDIWLQNN NCPLCRTSISA NWLIP DQAP PRD  LN+GS +
Sbjct: 121 QLRKIPICSHLFHIDCIDIWLQNNPNCPLCRTSISAQNWLIPIDQAPSPRDLPLNSGSSV 180

Query: 181 SA--ADENFVVIELGRNLDRRGPPALGSGDAAESKRKFKKVTSMGDECIDIREKDEEFIV 240
           +A  +DENFVVIELGRN DRR PP  G            KVTSMGDECID+REKD+EF+V
Sbjct: 181 AATTSDENFVVIELGRNPDRRRPPPFG------------KVTSMGDECIDMREKDKEFLV 240

Query: 241 QPIRRSFSMDSSGDRQLYMAVQAAVRQKSGGENGVEVEGCSSRVRRSFFSFGSGRGSRNA 300
           QPIRRSFSMDSSGDRQLYMAVQAAV+Q  GGE+ VE EGCS+RVRRSFFSFGSGRGSRN 
Sbjct: 241 QPIRRSFSMDSSGDRQLYMAVQAAVQQSGGGESRVEAEGCSNRVRRSFFSFGSGRGSRNG 296

Query: 301 VLPIQFQP 307
           VLPIQ QP
Sbjct: 301 VLPIQLQP 296

[Close]

BLAST of CaUC06G113600 vs. TAIR 10
Match: AT5G43420.1 (RING/U-box superfamily protein )

HSP 1 Score: 265.0 bits (676), Expect = 7.5e-71
Identity = 170/353 (48.16%), Postives = 212/353 (60.06%), Query Frame = 0


Query: 15  SSNSVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILRRFSLSRRR---EET 74
           +S++ +SFPI+AVAVIGI ATAFLLVSYY+FVIKCCLNW RI+IL RFSLSRRR   ++ 
Sbjct: 27  ASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSLSRRRRNDQDP 86

Query: 75  LILRQP-AEPRGLDPSTIQSIPLINYKKPTYETTSG--------------GECAVCLTEF 134
           L++  P    RGLD S I++IP+  +KK  Y+   G               EC+VCL+EF
Sbjct: 87  LMVYSPELRSRGLDESVIRAIPIFKFKK-RYDQNDGVFTGEGEEEEEKRSQECSVCLSEF 146

Query: 135 QTEEQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSISAPNWLIPTDQAPPPRDSALNT 194
           Q EE+LR IP CSHLFHIDCID+WLQNN+NCPLCRT +S  +   P D+   P  S  N 
Sbjct: 147 QDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSC-DTSFPPDRVSAPSTSPENL 206

Query: 195 GSPISAADENFVVIELG------RNLDRRG--------------------------PPAL 254
              +   +  +VVIELG      R+  R G                          P  L
Sbjct: 207 --VMLRGENEYVVIELGSSIGSDRDSPRHGRLLTGQERSNSGYLLNENTQNSISPSPKKL 266

Query: 255 GSGDAAESKRKFKKVTSMGDECIDIRE-KDEEF-IVQPIRRSFSMDSSGDRQLYMAVQAA 307
             G      RK  K+TSMGDECIDIR  KDE+F  +QPIRRS SMDSS DRQLY+AVQ A
Sbjct: 267 DRGGLPRKFRKLHKMTSMGDECIDIRRGKDEQFGSIQPIRRSISMDSSADRQLYLAVQEA 326

[Close]

BLAST of CaUC06G113600 vs. TAIR 10
Match: AT1G04360.1 (RING/U-box superfamily protein )

HSP 1 Score: 249.2 bits (635), Expect = 4.2e-66
Identity = 163/358 (45.53%), Postives = 215/358 (60.06%), Query Frame = 0


Query: 10  TSPL--HSSNSVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILRRFSLSRR 69
           TSP+   +S+S ++FPI+A+AVIGI ATAFLLVSYYIFVIKCCLNW +I+I RR   S  
Sbjct: 27  TSPIFPRTSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQIDIFRRRRRSSD 86

Query: 70  REETLILRQPAEPRGLDPSTIQSIPLINYKKPTY------ETTSGGECAVCLTEFQTEEQ 129
           +   +I       RGLD S I++IP+  +KK         ++ +  EC+VCL EFQ +E+
Sbjct: 87  QNPLMIYSPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEK 146

Query: 130 LRKIPICSHLFHIDCIDIWLQNNSNCPLCRTS-----------ISAPNWLIPTDQAPPPR 189
           LR IP C H+FHIDCIDIWLQ N+NCPLCRTS           ISAP+   P + +P  R
Sbjct: 147 LRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLISAPS--SPRENSPHSR 206

Query: 190 DSALNTGSPISAADENFVVIELG----------RNLD------RRGPPALGSGDAAES-- 249
           +  L  G  +   D++FVVIELG          RN+D      R     + +G++ +S  
Sbjct: 207 NRNLEPGL-VLGGDDDFVVIELGASNGNNRESVRNIDFLTEQERVTSNEVSTGNSPKSVS 266

Query: 250 --------------KRKFKKVTSMGDECIDIREKDEEF-IVQPIRRSFSMDSSGDRQLYM 307
                         +RKF KVTSMGDECID R KD  F  +QPIRRS SMDSS DRQLY+
Sbjct: 267 PLPIKFGNRGMYKKERKFHKVTSMGDECIDTRGKDGHFGEIQPIRRSISMDSSVDRQLYL 326

[Close]

BLAST of CaUC06G113600 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 101.7 bits (252), Expect = 1.1e-21
Identity = 57/146 (39.04%), Postives = 82/146 (56.16%), Query Frame = 0


Query: 15  SSNSVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQRIEILRRFSLSRRREETLIL 74
           SS+S SSF  + +A+IGI  +A +LVSYY  + K C    +       +L+   E     
Sbjct: 47  SSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSS 106

Query: 75  RQPAEPR--GLDPSTIQSIPLINYKKPTYETTSGGECAVCLTEFQTEEQLRKIPICSHLF 134
            Q       GL+ S I+SI +  YK        G +C+VCL+EF+  E LR +P C+H F
Sbjct: 107 TQRISTNGDGLNESMIKSITVYKYKSGD-GFVDGSDCSVCLSEFEENESLRLLPKCNHAF 166

Query: 135 HIDCIDIWLQNNSNCPLCRTSISAPN 159
           H+ CID WL+++SNCPLCR  ++  N
Sbjct: 167 HLPCIDTWLKSHSNCPLCRAFVTGVN 191

[Close]

BLAST of CaUC06G113600 vs. TAIR 10
Match: AT4G17905.1 (RING/U-box superfamily protein )

HSP 1 Score: 97.8 bits (242), Expect = 1.6e-20
Identity = 62/178 (34.83%), Postives = 91/178 (51.12%), Query Frame = 0


Query: 25  IAVAVIGICATAFLLVSYYIFVIKCCLN---------WQRIEILRRFSLSRRREETLILR 84
           + +A+ GI ATAFLL +YY  V K C N           R +I+   +   R ++     
Sbjct: 61  LVIAIFGIFATAFLLAAYYTLVSKYCANDTTNEAASESGRSDIILDVNSPERGDQDDPFA 120

Query: 85  QPAEPRGLDPSTIQSIPLINYKK-PTYETTSGGECAVCLTEFQTEEQLRKIPICSHLFHI 144
             +   GLD + I+ I     KK       +G +C++CL EF  +E LR +P C+H FH+
Sbjct: 121 LESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHV 180

Query: 145 DCIDIWLQNNSNCPLCRTSISAPNWLIPTDQAPPPRDSALNTG---SPISAADENFVV 190
            CID WL+++SNCPLCR  I     ++PT Q P      +N     S + +A+ N VV
Sbjct: 181 VCIDRWLKSHSNCPLCRAKI-----IVPTTQQPEHHVVVMNLDRFTSNVGSAEGNVVV 233

[Close]

BLAST of CaUC06G113600 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein )

HSP 1 Score: 95.9 bits (237), Expect = 6.0e-20
Identity = 81/255 (31.76%), Postives = 118/255 (46.27%), Query Frame = 0


Query: 17  NSVSSFPIIAVAVIGICATAFLLVSYYIFVIKCCLNWQR------IEILRRFSLSRRREE 76
           +S S F  + +A+IGI A+AF+LVSYY  + K C   +          + R S     + 
Sbjct: 51  SSSSDFSPLLIALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQG 110

Query: 77  TLILRQPAEPR-----------GLDPSTIQSIPLINYKKPTYETTSGGECAVCLTEFQTE 136
           T                     GLD S I+SI +  Y+K      S  +C+VCL+EFQ  
Sbjct: 111 TNNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVES-SDCSVCLSEFQEN 170

Query: 137 EQLRKIPICSHLFHIDCIDIWLQNNSNCPLCRTSI---SAPNWLIPTDQAPPPRDSALNT 196
           E LR +P C+H FH+ CID WL+++SNCPLCR  I   SA   +  T+Q     +++++T
Sbjct: 171 ESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDLTNQQIVTENNSIST 230

Query: 197 GSPISAADENFVVIELGRNLDRRGPPALGSGDAAESKRKFKKVTSMGDECIDIREKDEEF 252
           G      D++ VV+ L     R     +  G            T    E  D R+ +E  
Sbjct: 231 G------DDSVVVVNLDLENSRSRNETVNEGS-----------TPKPPEMQDSRDGEE-- 280

The following BLAST results are available for this feature:

BLAST of CaUC06G113600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875603.1	6.0e-155	92.48	RING-H2 finger protein ATL16-like [Benincasa hispida]	[more]
XP_008460634.1	3.6e-152	91.18	PREDICTED: RING-H2 finger protein ATL16 [Cucumis melo] >KAA0065677.1 RING-H2 fin...	[more]
XP_004142260.1	1.9e-148	89.58	RING-H2 finger protein ATL16 [Cucumis sativus]	[more]
XP_023006323.1	2.5e-137	83.44	RING-H2 finger protein ATL16-like [Cucurbita maxima]	[more]
XP_022958779.1	3.1e-135	82.14	RING-H2 finger protein ATL16-like [Cucurbita moschata]	[more]

BLAST of CaUC06G113600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSW9	1.0e-69	48.16	RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1	[more]
P93823	6.0e-65	45.53	RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1	[more]
Q9LF64	1.5e-20	39.04	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
P0C041	2.2e-19	34.83	Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 P...	[more]
Q9SRQ8	8.4e-19	31.76	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2	[more]

BLAST of CaUC06G113600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VEZ8	1.8e-152	91.18	RING-H2 finger protein ATL16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3CD01	1.8e-152	91.18	RING-H2 finger protein ATL16 OS=Cucumis melo OX=3656 GN=LOC103499411 PE=4 SV=1	[more]
A0A0A0LNP5	9.0e-149	89.58	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G178720 P...	[more]
A0A6J1L4L0	1.2e-137	83.44	RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111499094 PE...	[more]
A0A6J1H640	1.5e-135	82.14	RING-H2 finger protein ATL16-like OS=Cucurbita moschata OX=3662 GN=LOC111459948 ...	[more]

BLAST of CaUC06G113600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43420.1	7.5e-71	48.16	RING/U-box superfamily protein	[more]
AT1G04360.1	4.2e-66	45.53	RING/U-box superfamily protein	[more]
AT5G17600.1	1.1e-21	39.04	RING/U-box superfamily protein	[more]
AT4G17905.1	1.6e-20	34.83	RING/U-box superfamily protein	[more]
AT3G03550.1	6.0e-20	31.76	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 109..150 e-value: 8.8E-6 score: 35.2
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 108..151 e-value: 3.1E-12 score: 46.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 109..151 score: 12.25323
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 71..157 e-value: 2.5E-22 score: 80.3
IPR044600	RING-H2 finger protein ATL1/ATL16	PANTHER	PTHR46913	RING-H2 FINGER PROTEIN ATL16	coord: 10..305
None	No IPR available	PANTHER	PTHR46913:SF1	RING-H2 FINGER PROTEIN ATL16	coord: 10..305
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 108..151 e-value: 7.76967E-17 score: 70.7937
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 99..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC06G113600.1	CaUC06G113600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016740	transferase activity