CaUC06G111560 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCGGGTTGAGCGTGATTTTGGAATCCAACCAGGGAGATTTCCGTAAAAAATCTTCCCAAGTTATCAGTAAATCCTCCGTCGTCCTCATGAATAGTCTCTCTTCTTCTTCTTCTTCTTCTAAAAACAAGCATTCCTTTCTCCAAACGCCGTCGTTTCGCCTCGATTACTGCTTCCTCTGCAAACAGAAGCTCTTGCCTGGAAATGATATCTACATGTACAAGTAATTCTCTCTTTTTCTTATATATATGTATATATATTTATTTATATATCTTTTTTTCTTATGATTTTGGATTTCTAGAGGAGATAGGGGATTTTGCAGTGTGGAGTGTAGGTGCAGGCAGATTTTCATGGACGAAGAAGAGAATGTTATGAAGGATCATTGTCGTAAAACGGCGTCGTCTTCGACTTCTTATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAATGGCGGCTAACCGCAAAACCACGAGAAATCGGAGGGGACAGTTTGCAACTCCGTATTGA ATGGTCGGGTTGAGCGTGATTTTGGAATCCAACCAGGGAGATTTCCGTAAAAAATCTTCCCAAGTTATCAGTAAATCCTCCGTCGTCCTCATGAATAGTCTCTCTTCTTCTTCTTCTTCTTCTAAAAACAAGCATTCCTTTCTCCAAACGCCGTCGTTTCGCCTCGATTACTGCTTCCTCTGCAAACAGAAGCTCTTGCCTGGAAATGATATCTACATGTACAAAGGAGATAGGGGATTTTGCAGTGTGGAGTGTAGGTGCAGGCAGATTTTCATGGACGAAGAAGAGAATGTTATGAAGGATCATTGTCGTAAAACGGCGTCGTCTTCGACTTCTTATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAATGGCGGCTAACCGCAAAACCACGAGAAATCGGAGGGGACAGTTTGCAACTCCGTATTGA ATGGTCGGGTTGAGCGTGATTTTGGAATCCAACCAGGGAGATTTCCGTAAAAAATCTTCCCAAGTTATCAGTAAATCCTCCGTCGTCCTCATGAATAGTCTCTCTTCTTCTTCTTCTTCTTCTAAAAACAAGCATTCCTTTCTCCAAACGCCGTCGTTTCGCCTCGATTACTGCTTCCTCTGCAAACAGAAGCTCTTGCCTGGAAATGATATCTACATGTACAAAGGAGATAGGGGATTTTGCAGTGTGGAGTGTAGGTGCAGGCAGATTTTCATGGACGAAGAAGAGAATGTTATGAAGGATCATTGTCGTAAAACGGCGTCGTCTTCGACTTCTTATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAATGGCGGCTAACCGCAAAACCACGAGAAATCGGAGGGGACAGTTTGCAACTCCGTATTGA MVGLSVILESNQGDFRKKSSQVISKSSVVLMNSLSSSSSSSKNKHSFLQTPSFRLDYCFLCKQKLLPGNDIYMYKGDRGFCSVECRCRQIFMDEEENVMKDHCRKTASSSTSYSSSSSSSSSSSSSSSSSSSMAANRKTTRNRRGQFATPY Homology
BLAST of CaUC06G111560 vs. NCBI nr
Match: XP_038875659.1 (FCS-Like Zinc finger 15 [Benincasa hispida]) HSP 1 Score: 210.7 bits (535), Expect = 8.8e-51 Identity = 123/151 (81.46%), Postives = 131/151 (86.75%), Query Frame = 0
BLAST of CaUC06G111560 vs. NCBI nr
Match: KAG6593979.1 (FCS-Like Zinc finger 15, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 155.2 bits (391), Expect = 4.4e-34 Identity = 97/148 (65.54%), Postives = 119/148 (80.41%), Query Frame = 0
BLAST of CaUC06G111560 vs. NCBI nr
Match: KAG7026319.1 (Protein MARD1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 154.8 bits (390), Expect = 5.8e-34 Identity = 97/148 (65.54%), Postives = 118/148 (79.73%), Query Frame = 0
BLAST of CaUC06G111560 vs. NCBI nr
Match: XP_023000009.1 (uncharacterized protein LOC111494321 [Cucurbita maxima]) HSP 1 Score: 153.3 bits (386), Expect = 1.7e-33 Identity = 99/148 (66.89%), Postives = 117/148 (79.05%), Query Frame = 0
BLAST of CaUC06G111560 vs. NCBI nr
Match: XP_023515013.1 (uncharacterized protein LOC111779167 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 152.9 bits (385), Expect = 2.2e-33 Identity = 96/148 (64.86%), Postives = 118/148 (79.73%), Query Frame = 0
BLAST of CaUC06G111560 vs. ExPASy Swiss-Prot
Match: Q9FH22 (FCS-Like Zinc finger 15 OS=Arabidopsis thaliana OX=3702 GN=FLZ15 PE=1 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 7.6e-13 Identity = 55/166 (33.13%), Postives = 90/166 (54.22%), Query Frame = 0
BLAST of CaUC06G111560 vs. ExPASy Swiss-Prot
Match: Q8VY80 (FCS-Like Zinc finger 5 OS=Arabidopsis thaliana OX=3702 GN=FLZ5 PE=1 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 1.2e-05 Identity = 34/86 (39.53%), Postives = 50/86 (58.14%), Query Frame = 0
BLAST of CaUC06G111560 vs. ExPASy TrEMBL
Match: A0A6J1KIQ1 (uncharacterized protein LOC111494321 OS=Cucurbita maxima OX=3661 GN=LOC111494321 PE=3 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 8.1e-34 Identity = 99/148 (66.89%), Postives = 117/148 (79.05%), Query Frame = 0
BLAST of CaUC06G111560 vs. ExPASy TrEMBL
Match: A0A6J1EVA4 (protein MARD1 OS=Cucurbita moschata OX=3662 GN=LOC111436914 PE=3 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 5.4e-30 Identity = 72/102 (70.59%), Postives = 85/102 (83.33%), Query Frame = 0
BLAST of CaUC06G111560 vs. ExPASy TrEMBL
Match: A0A1S3C923 (uncharacterized protein DDB_G0271670 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497839 PE=3 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 2.7e-29 Identity = 99/155 (63.87%), Postives = 111/155 (71.61%), Query Frame = 0
BLAST of CaUC06G111560 vs. ExPASy TrEMBL
Match: A0A6A1VM23 (FLZ-type domain-containing protein OS=Morella rubra OX=262757 GN=CJ030_MR5G017222 PE=3 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 2.3e-28 Identity = 92/155 (59.35%), Postives = 107/155 (69.03%), Query Frame = 0
BLAST of CaUC06G111560 vs. ExPASy TrEMBL
Match: A0A5N6RD03 (FLZ-type domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_015417 PE=3 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 6.7e-28 Identity = 91/149 (61.07%), Postives = 105/149 (70.47%), Query Frame = 0
BLAST of CaUC06G111560 vs. TAIR 10
Match: AT5G49120.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 75.1 bits (183), Expect = 5.4e-14 Identity = 55/166 (33.13%), Postives = 90/166 (54.22%), Query Frame = 0
BLAST of CaUC06G111560 vs. TAIR 10
Match: AT1G22160.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 51.2 bits (121), Expect = 8.4e-07 Identity = 34/86 (39.53%), Postives = 50/86 (58.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|