CaUC06G110380 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC06G110380
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	shootin-1-like
Location	Ciama_Chr06: 4686983 .. 4692609 (+)
RNA-Seq Expression	CaUC06G110380
Synteny	CaUC06G110380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTTATTCAGGATTCGAGAACGAGAATTGGAGGTTTCATCTTTCATGGAGGAAACCAAAGCACCACAATCTGCACCAATCCAAGCGCCAGCTCCTCCAACTACAGCTCCATCTCAACCCACTCAGACATTGCCTCCTCTTCCTCCGAAATCCAAGAAGAGGCCACTCGACAGAAATGCTTATATCCAATATACAAAGATGCGAGCTGTTATTAGAGATCTTCGTCCTCATTTTCTCGAGGTATCAACCCGGATCAATTTCCTTCTCATGGTTATTCTCTCATAATCTCTGGTTGTTTTTAACGATTTCAATATCTGTTTCTGGGTTTTCTTTGCATCTGGCAAAACGGTGATTTAGTAGCTTGAAATTGAGCGGAGTATCTGTTTGGTGAAAGTTTGTATTTGCTAATTTAGTACGATTTCTCTATGTTAGGACGAGTTTCACTTTGTTAGTGTATTTGATACTATTTTGCTCTGGTTTTTCTTCTCTCTCTTGAAGGTTTTGAAGACTCCCGACTTTCGCAATTGCAAGGCAGCTAATGAAATTCGAGAAAGTAAGTGCTTTATGATTCGCCTTCGTTTTTTGTCTGTTAAACGTTGAAAGCATTCACATTACGTTCAAACACTTTGCATCAATGGAACATTTTCACATTTTTATGTTGTTTGAAACGCGAGTAGCTTGGGGAGCTAGTTTGAACAGATTTATCTGCATTCTCGAACAAATGTTCAGGAAATAACATATTTGACAGATTTTTATTTAAAAATTTTCCATTTTCCCCCCACACAGCTAGAAACAACTATAAGTTGTTATTAGTTCCAAAACTATGGACTTGTGGGAACGAGGTCAAATGAAGAATAACTTAAACCTTTACGAGCCTCCTGAACTAAAACAACTAATAAAGAGGCTTGAAAACAAAAACTGAAAGCTATTTCAAAACAACCCCTAAAAATTCCCAATTACTTACTAACCCATTGGATCTATCTTCTTGTTTCCTGATTCCAACTTGTTTTCTTATTGGTTATCTATTAATGTTTTTGTATCATTGTTGCTTGTCTAAGATGTTTAGATTTAGCTCAAGAGCAGATTACAAAAAATAGGATAAAAAAAGAAACAAAATCAAGTTAATCTTCTTTAAAAGTTCTCTTGTTTCTTAACCATCATGGGTTAGCCTAGTGGTGAAAAAGGAGACATAGTCTTAATAAATGACTAAGAGGTCAAGGGTCCTCTTTTTATTGAATATCAGGGGGGGGGGGGGGTGCCCAAAAAGTCTAAGTTTGTTCCAAAGGGTCTAGAAACAATTTTGCAGCAATGTCTTTGGTCCCTTATTCTCTATGCACACTATGCACCAACTTGGATCAGGAGCAGTGTTAGGATTTCTAGATTAGAAACACTCACTAAAGGATCCCTTGTACATTCTCATGGTTGGCCTTGAGAGTTCAAGAGGGGAACTCCCATTTGTTTATGTTTTGACTATTTCTAGGTGACAGAATCATCCTTTGCTATCTTTCTCCCAAGCCTCCACATGTTTCATGCATAATTGGAAATTTGGAATTTAGTTGTTCTTCCCCCAGAACTGCATGTAACTCCTTGAATGGCAACTCCCATGCCTCTACGGTGCCTCATTCATGCTCGCCATTTGTCATGTAGGGGATAATAATTTCTAGGTGTGCCACTTGTCTTGTTCTTGCTTGGTCCACACATGCGATTTGTCTCATGTCTTCATTATGTGGTTTTTGTGGCTATCTTTTGGTCTACTCCATCCTTTTTCTTTTATTTAATTTTTTTTTTTTATAGAACGACAACTTTCATTGAGATAAAAATGGAGTACAAGAGGAAACAGAAACCAACTACCCAAAAGAGATACTTCATCTTCCTTTTGGTAGCTATGTAAGAATCCACACTTCTTTTTCAAAATTGCACAAGATCCTTTGACGTTGCTTGATGGAGCTTCACCCCATTGAGGTTCCTTTCGTGCATGGTGGATGAGAGCCAACTCCTTTGGTGCCTTCTGTTGCTTGTAAAGGGCACCTTTTACAGGCACTTTTGTTGTGTGTATGAGAGTGGTCCTACCCTAGCTATCAAAACAGACTCCAATCCAAAAGAATAAGTCCTCGAGCAGCCCTACCGATCCACACCTTTATTTTTGTGTGGCCCTACCTGCCTCACATTCTCGATGTGTGCACTTGTCATTGTGTCGCCAGTCAGTCCATGCACTTTTCATGTGCACGTCTCTTGTATGTGCAGCCTCCATATGACTCCCTTGCCTTGAGGTTATGCATATGTTGCCAACATATGTTTTTCCCCTCTTTGTGGATGAGGGTATGCTTGCAGCCTACCCTCTGTCCATTGATGATCTCCCATGCATGACTCCTTTTTGCATATTGCCTATACTATGAGCCTCCTTTGGTGTGAATGGCTTTGGAAGAAGGTACCGTGTGCCCTTTGACTTAGTCTTTTCTCTCCATGGGCCTTCTGCCAATGTGCAACCGGTCATATTTTATGTGAATCCTAGTTTTATCATGCTTTGTCTCTTTCTTGGATTGGTTCAAGTCCTCTATCTCTGGCCTCTTTAAGATCTCGAGCTCCAAGGGTCTAACAAGGAGTTGGGCACTTCTCAACGAGAGGAACTTCCATGGAATGAAGCTCCTGCTCCATCAACCAAACCAAGCTCAAAGGATCACACACTATTTTGAAAAGAAGTGTGGATTCTTTTATAGTTGAGAAAAGGAGATAGAGTAGGATCAATGGGTATCCACAAACCCCACACACCTAAAGGTATGAGACAAGTGGCGTGTGTGGACCAAGCAAGAACAAGACGTGTGACAAGTGAAACATACCTAGCAATGGATACCCCTTACATGATAAATGGTGAGCATGGATGTGACACCTCTTATATGAGTGGCATGGTGCAAGCACAGAATAGTCCTTTTAGTAGTGGACAGTTTCTTGCAATTTTCAGAGGAGAACAACTGAATTTCAGTTATGCATGAAACACGTGGAGGCTTGAGGGAAAGACAAGTCATAGATAAATTGTCAAGACATATCCAAATGCTTGACAAATCCAAATGAGAGTTCCTTCCCCTTCCCTATAAAAGAATAATCTTGTGGAATGTACAAGGGGTCCTTTGGTGTGTGTTCAACCTTGGTATTCTTTTGATTGAGAGTGACTAAAGTAAAATAAGGGTTTGCGACAAAAATGTTCCAACTTCTAACGGTCTTCTTTGATGGTAATCTTACACCCCCTTTTTTCTCTTCCTCTTTAGCCTTTGTGTTTGGTAGGCCGACTAAGATAGAATCTTAGCATGGGGTGAGATGGACTTTTGGCTGGATTATCAACCTCATTTTCTCTGTATTTCGTCTTTGCATTGGTTGAAACTTCTCATAGGCTAGGTACTTTCACAACTGCTCCTTGAAGTTTGTCTCCTCTCAAATCCCCCCAGCCAGCTATTTAAAACCACTTTACTATCAGATGCCTTAACTAATGACTAATATGTCTATATTCTAAAATTTGCCTACTAATGTTGATATTCTCTGCTCCCAAACATACTTTGTCTTCGGGGTTTAGTTGATCAACTGGTTCGACCAAAACAAATTCCCATTCGTGGATTGAGCATCAAATTGTGTGACCACATCCACATGAAAAATAAATGCAAAATCTTGAGACCCTCGACAATGAGAAGTCCCAACAGCCAGCCCCATTGCTTTCCATTTGTTCTCTTCTATTTGCTTGAACTGTTTAACTCATCCAACTAAACTGTCCAATTCCCCTTGCACTGATGTTGTCACTCTTACCCAAAATTTAGCTTCAGCTCTTGGGCTTTTGACATGGAAATCAAGAAACAACGATATTTAGAGATTCCAACACCCTTGAATTGGAAAGCCTTAGAATACATGGTAGAATTCACGATCAAGTTTCCTTGATTAGCTCCTAAAATCTGCTACTATCGTTGCTGTTGCCTCAGTTTTTCTGCTGCCACCTCTATGAAATAAAATCCCAAATTTGGGAAGAGATTTCTACACGTGGGTTTAAAGAGAAGAGGAAAATTTTCTTTTAGTTGGGTATCATACCCATTAGTGGATCCACATGCCCTCGTGAATCAAACTATTAGTTTTTTAGTTGAGCATTGATACCACCCTACACTCCAACATTTCACGAGTGATGAAACCTGAAACTCTGCTCCTTCAAGCAGTAATTCACACAAGCACTTAGATCCTTGAGGTGTATGCCCAATCGCCAGCCTACTCCCTGAGACTCTTCCCAGCCACGATGTTCATAACATTGCAAGTACTTCAATCACGCCACATAGCTTTTCTTCCCTCCAAAACTTGGTTCTGAAAAGTTCCTTTGTGGCTTTGTGATTCTCCCTTTTCTTCAACCATTTTGCTTCTTGATGCCATCTGGCCACACCATCGATGCCTCAAAGATTCTAACTCCGACCAAATTATCTTTTCTCAAAAACCTACATCCTCTCTAGTCCCAACCCCCTCCCTTCCCATCCCCCCACCCTATTCTGCTTATAACTACTTCACTAACATACTCCTTAGTTAACGACCAGTATCCCCACTCCAGAATGCCTTTCTCTTATATATGAAACCAACAGACCCACGCCCAGATGTACTAATAATGTTCCTAATTATTTCATATCCCATATGTGGTGATTGTAAGAGAGAGAAGATCAGATTTGTCATTGCTAGTGCGCCCAAGGAGAGGTCATTGATACTCAATCTCCACCAACATTTAGCCAGTCATGGCTTCTTTACTATTAAGATTCCGTCTGAAGTAGTGGCCCCAGGAGGAAGAGGCAGCACTGGCTAACGAAAGTACATTTCTTTCTTCAAAGGGAAGCGGAAGAGAGAGCCACTTCACTAGTCTTCTGTCCTTGGGTTGTTCATGGACTCATCCAACCAGACAATCTTCAAAACATGGGAAATCCAAAACTCTTTTAAGTTTGTTTGTTTGTTTTTTTTTTTTCTTACTACAAGTCCAATAATTGTGAAATGCATGATCTGAGTCTAGACAATGACTGTAACTTTTTAAGCTTAAGGAAATGTGGACTTGCAGGAATAAAGGTTCTACAGGACATGTATGTATTAATGATGGCAACAACTTCAGAAACTCTTTACATCGAGAAGACTAGTAATGTGCTCGATGGTCAGTCCTCGTCAGTTGACAATCAAGATCGACGACCCCGAGAACGCCATGATGGTAAACTGGGGGACAAGTCATCTACAAAATCATATGAAAGTAATAACCCTTCAAGTTATGGCCCAGAAAAGCAGCGGGCAAATGATGGCCAGATATCTGGATCTTATGTTGTTGGTGGATCGGCATTTGGCTGGAACTTCATTGCCTTCACAGGTACCGAACCAGTATACTATGGAATTACGAAGGAAGTATTTCGAGAAAAAAATCCCATTGTTTCATCAGAATCATGATTTTGAAAAGTTGTGTACTACAGAAGTGTTCTATGATATCATGACTTAAGATGAGCATTCAATAGATGAAATTGCTTCAATTTAGAATGCTAATGTACAATGTAGAAGTTCAAGTATGAAGATATTAACACTGATCTTCCTTTATTTAATACCTTTGATGATTAACATCAAATGGGAGTTTTGTTGAACCAA

mRNA sequence

CCTTATTCAGGATTCGAGAACGAGAATTGGAGGTTTCATCTTTCATGGAGGAAACCAAAGCACCACAATCTGCACCAATCCAAGCGCCAGCTCCTCCAACTACAGCTCCATCTCAACCCACTCAGACATTGCCTCCTCTTCCTCCGAAATCCAAGAAGAGGCCACTCGACAGAAATGCTTATATCCAATATACAAAGATGCGAGCTGTTATTAGAGATCTTCGTCCTCATTTTCTCGAGGACGAGTTTCACTTTGTTAGTGTATTTGATACTATTTTGCTCTGGTTTTTCTTCTCTCTCTTGAAGGTTTTGAAGACTCCCGACTTTCGCAATTGCAAGGCAGCTAATGAAATTCGAGAAAGAATAAAGGTTCTACAGGACATGTATGTATTAATGATGGCAACAACTTCAGAAACTCTTTACATCGAGAAGACTAGTAATGTGCTCGATGGTCAGTCCTCGTCAGTTGACAATCAAGATCGACGACCCCGAGAACGCCATGATGGTAAACTGGGGGACAAGTCATCTACAAAATCATATGAAAGTAATAACCCTTCAAGTTATGGCCCAGAAAAGCAGCGGGCAAATGATGGCCAGATATCTGGATCTTATGTTGTTGGTGGATCGGCATTTGGCTGGAACTTCATTGCCTTCACAGGTACCGAACCAGTATACTATGGAATTACGAAGGAAGTATTTCGAGAAAAAAATCCCATTGTTTCATCAGAATCATGATTTTGAAAAGTTGTGTACTACAGAAGTGTTCTATGATATCATGACTTAAGATGAGCATTCAATAGATGAAATTGCTTCAATTTAGAATGCTAATGTACAATGTAGAAGTTCAAGTATGAAGATATTAACACTGATCTTCCTTTATTTAATACCTTTGATGATTAACATCAAATGGGAGTTTTGTTGAACCAA

Coding sequence (CDS)

ATGGAGGAAACCAAAGCACCACAATCTGCACCAATCCAAGCGCCAGCTCCTCCAACTACAGCTCCATCTCAACCCACTCAGACATTGCCTCCTCTTCCTCCGAAATCCAAGAAGAGGCCACTCGACAGAAATGCTTATATCCAATATACAAAGATGCGAGCTGTTATTAGAGATCTTCGTCCTCATTTTCTCGAGGACGAGTTTCACTTTGTTAGTGTATTTGATACTATTTTGCTCTGGTTTTTCTTCTCTCTCTTGAAGGTTTTGAAGACTCCCGACTTTCGCAATTGCAAGGCAGCTAATGAAATTCGAGAAAGAATAAAGGTTCTACAGGACATGTATGTATTAATGATGGCAACAACTTCAGAAACTCTTTACATCGAGAAGACTAGTAATGTGCTCGATGGTCAGTCCTCGTCAGTTGACAATCAAGATCGACGACCCCGAGAACGCCATGATGGTAAACTGGGGGACAAGTCATCTACAAAATCATATGAAAGTAATAACCCTTCAAGTTATGGCCCAGAAAAGCAGCGGGCAAATGATGGCCAGATATCTGGATCTTATGTTGTTGGTGGATCGGCATTTGGCTGGAACTTCATTGCCTTCACAGGTACCGAACCAGTATACTATGGAATTACGAAGGAAGTATTTCGAGAAAAAAATCCCATTGTTTCATCAGAATCATGA

Protein sequence

MEETKAPQSAPIQAPAPPTTAPSQPTQTLPPLPPKSKKRPLDRNAYIQYTKMRAVIRDLRPHFLEDEFHFVSVFDTILLWFFFSLLKVLKTPDFRNCKAANEIRERIKVLQDMYVLMMATTSETLYIEKTSNVLDGQSSSVDNQDRRPRERHDGKLGDKSSTKSYESNNPSSYGPEKQRANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIVSSES

Homology

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BLAST of CaUC06G110380 vs. NCBI nr
Match: XP_038874738.1 (uncharacterized protein LOC120067276 [Benincasa hispida])

HSP 1 Score: 354.4 bits (908), Expect = 7.5e-94
Identity = 194/230 (84.35%), Postives = 198/230 (86.09%), Query Frame = 0


Query: 1   MEETKAPQSAPIQAPAPPTTAPSQPTQTLPPLPPKSKKRPLDRNAYIQYTKMRAVIRDLR 60
           MEETKA QSAPIQAP PP+TAPS   QTLPPLPPK KKRPLDRNAYIQYTKMRAVIRDLR
Sbjct: 1   MEETKASQSAPIQAPVPPSTAPS---QTLPPLPPKLKKRPLDRNAYIQYTKMRAVIRDLR 60

Query: 61  PHFLEDEFHFVSVFDTILLWFFFSLLKVLKTPDFRNCKAANEIRERIKVLQDMYVLMMAT 120
           PHFLE                      VLKTPDFRNCKAANEIRERIKVLQDMY+LMMAT
Sbjct: 61  PHFLE----------------------VLKTPDFRNCKAANEIRERIKVLQDMYILMMAT 120

Query: 121 TSETLYIEKTSNVLDGQSSSVDNQDRRPRER-HDGKLGDKSSTKSYESNNPSSYGPEKQR 180
           TSETLYIEKTSNVLDGQSSSVDNQDRR RE+ HDGKLGDKSSTKSYESNNPSSY  EKQR
Sbjct: 121 TSETLYIEKTSNVLDGQSSSVDNQDRRSREQHHDGKLGDKSSTKSYESNNPSSYATEKQR 180

Query: 181 ANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIVSSES 230
           ANDGQISGSY+VGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIVSSES
Sbjct: 181 ANDGQISGSYIVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIVSSES 205

[Close]

BLAST of CaUC06G110380 vs. NCBI nr
Match: KAG6575171.1 (hypothetical protein SDJN03_25810, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 325.5 bits (833), Expect = 3.7e-85
Identity = 176/230 (76.52%), Postives = 191/230 (83.04%), Query Frame = 0


Query: 1   MEETKAPQSAPIQAPAPPTTAPSQPTQTLPPLPPKSKKRPLDRNAYIQYTKMRAVIRDLR 60
           MEE KAPQSAP+    PP+TAPSQPT  LPPLPPK KKRPLDRNAYIQYTKMRAVIRDLR
Sbjct: 1   MEEIKAPQSAPL----PPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLR 60

Query: 61  PHFLEDEFHFVSVFDTILLWFFFSLLKVLKTPDFRNCKAANEIRERIKVLQDMYVLMMAT 120
           PHFLE                      VLKTP+FRNCKAANEIRERIK+LQDMY++MMAT
Sbjct: 61  PHFLE----------------------VLKTPEFRNCKAANEIRERIKLLQDMYIMMMAT 120

Query: 121 TSETLYIEKTSNVLDGQSSSVDNQDRRPRER-HDGKLGDKSSTKSYESNNPSSYGPEKQR 180
           TSE+LYIEKTSNVLDGQS SVDNQD+R RE+ HDGK G KSSTKSYESN+PSS+ PEKQ 
Sbjct: 121 TSESLYIEKTSNVLDGQSLSVDNQDQRSREQHHDGKQGGKSSTKSYESNHPSSHAPEKQG 180

Query: 181 ANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIVSSES 230
           ANDGQ SG+Y+VGGSAFGWNFIAFTGTEPVYYG+TKE FR+KNPIVSSES
Sbjct: 181 ANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFRKKNPIVSSES 204

[Close]

BLAST of CaUC06G110380 vs. NCBI nr
Match: XP_023006667.1 (uncharacterized protein LOC111499323 [Cucurbita maxima])

HSP 1 Score: 324.7 bits (831), Expect = 6.4e-85
Identity = 177/230 (76.96%), Postives = 190/230 (82.61%), Query Frame = 0


Query: 1   MEETKAPQSAPIQAPAPPTTAPSQPTQTLPPLPPKSKKRPLDRNAYIQYTKMRAVIRDLR 60
           MEE KA QSAP+    PP+TAPSQPT  LPPLPPK KKRPLDRNAYIQYTKMRAVIRDLR
Sbjct: 1   MEEIKASQSAPL----PPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLR 60

Query: 61  PHFLEDEFHFVSVFDTILLWFFFSLLKVLKTPDFRNCKAANEIRERIKVLQDMYVLMMAT 120
           PHFLE                      VLKTP+FRNCKAANEIRERIK+LQDMY+LMMAT
Sbjct: 61  PHFLE----------------------VLKTPEFRNCKAANEIRERIKLLQDMYILMMAT 120

Query: 121 TSETLYIEKTSNVLDGQSSSVDNQDRRPRER-HDGKLGDKSSTKSYESNNPSSYGPEKQR 180
           TSE+LYIEKTSNVLDGQS SVDNQD+R RE+ HDGK G KSSTKSYESN+PSS+ PEKQ 
Sbjct: 121 TSESLYIEKTSNVLDGQSISVDNQDQRSREQYHDGKQGGKSSTKSYESNHPSSHAPEKQG 180

Query: 181 ANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIVSSES 230
           ANDGQ SG+Y+VGGSAFGWNFIAFTGTEPVYYG+TKE FREKNPIVSSES
Sbjct: 181 ANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFREKNPIVSSES 204

[Close]

BLAST of CaUC06G110380 vs. NCBI nr
Match: XP_023548253.1 (uncharacterized protein LOC111806942 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 324.3 bits (830), Expect = 8.3e-85
Identity = 177/230 (76.96%), Postives = 190/230 (82.61%), Query Frame = 0


Query: 1   MEETKAPQSAPIQAPAPPTTAPSQPTQTLPPLPPKSKKRPLDRNAYIQYTKMRAVIRDLR 60
           MEE KAPQSAP+    PP+TAPSQPT  LPPLPPK KKRPLDRNAYIQYTKMRAVIRDLR
Sbjct: 1   MEEIKAPQSAPL----PPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLR 60

Query: 61  PHFLEDEFHFVSVFDTILLWFFFSLLKVLKTPDFRNCKAANEIRERIKVLQDMYVLMMAT 120
           PHFLE                      VLKTP+FRNCKAANEIRERIK+LQDMY+LMMAT
Sbjct: 61  PHFLE----------------------VLKTPEFRNCKAANEIRERIKLLQDMYILMMAT 120

Query: 121 TSETLYIEKTSNVLDGQSSSVDNQDRRPRER-HDGKLGDKSSTKSYESNNPSSYGPEKQR 180
           TSE+LYIEKTS VLDGQS SVDNQD+R RE+ HDGK G KSSTKSYESN+PSS+ PEKQ 
Sbjct: 121 TSESLYIEKTSIVLDGQSLSVDNQDQRSREQHHDGKQGGKSSTKSYESNHPSSHAPEKQG 180

Query: 181 ANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIVSSES 230
           ANDGQ SG+Y+VGGSAFGWNFIAFTGTEPVYYG+TKE FREKNPIVSSES
Sbjct: 181 ANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFREKNPIVSSES 204

[Close]

BLAST of CaUC06G110380 vs. NCBI nr
Match: XP_022959506.1 (uncharacterized protein LOC111460466 [Cucurbita moschata])

HSP 1 Score: 323.6 bits (828), Expect = 1.4e-84
Identity = 175/230 (76.09%), Postives = 190/230 (82.61%), Query Frame = 0


Query: 1   MEETKAPQSAPIQAPAPPTTAPSQPTQTLPPLPPKSKKRPLDRNAYIQYTKMRAVIRDLR 60
           MEE KAPQSAP+    PP+TAPSQPT  LPPLPPK KKRPLDRNAYIQYTKMRAVIRDLR
Sbjct: 1   MEEIKAPQSAPL----PPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLR 60

Query: 61  PHFLEDEFHFVSVFDTILLWFFFSLLKVLKTPDFRNCKAANEIRERIKVLQDMYVLMMAT 120
           PHFLE                      VLKTP+FRNCKAANEIRERIK+LQDMY++MMAT
Sbjct: 61  PHFLE----------------------VLKTPEFRNCKAANEIRERIKLLQDMYIMMMAT 120

Query: 121 TSETLYIEKTSNVLDGQSSSVDNQDRRPRER-HDGKLGDKSSTKSYESNNPSSYGPEKQR 180
           TSE+LYIEKTSNVLDGQS SVDNQD+R RE+ HDGK G KSSTKSYESN+PSS+ PEK  
Sbjct: 121 TSESLYIEKTSNVLDGQSLSVDNQDQRSREQHHDGKQGGKSSTKSYESNHPSSHAPEKHG 180

Query: 181 ANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIVSSES 230
           ANDGQ SG+Y+VGGSAFGWNFIAFTGTEPVYYG+TKE FR+KNPIVSSES
Sbjct: 181 ANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFRKKNPIVSSES 204

[Close]

BLAST of CaUC06G110380 vs. ExPASy TrEMBL
Match: A0A6J1KWG6 (uncharacterized protein LOC111499323 OS=Cucurbita maxima OX=3661 GN=LOC111499323 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 3.1e-85
Identity = 177/230 (76.96%), Postives = 190/230 (82.61%), Query Frame = 0


Query: 1   MEETKAPQSAPIQAPAPPTTAPSQPTQTLPPLPPKSKKRPLDRNAYIQYTKMRAVIRDLR 60
           MEE KA QSAP+    PP+TAPSQPT  LPPLPPK KKRPLDRNAYIQYTKMRAVIRDLR
Sbjct: 1   MEEIKASQSAPL----PPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLR 60

Query: 61  PHFLEDEFHFVSVFDTILLWFFFSLLKVLKTPDFRNCKAANEIRERIKVLQDMYVLMMAT 120
           PHFLE                      VLKTP+FRNCKAANEIRERIK+LQDMY+LMMAT
Sbjct: 61  PHFLE----------------------VLKTPEFRNCKAANEIRERIKLLQDMYILMMAT 120

Query: 121 TSETLYIEKTSNVLDGQSSSVDNQDRRPRER-HDGKLGDKSSTKSYESNNPSSYGPEKQR 180
           TSE+LYIEKTSNVLDGQS SVDNQD+R RE+ HDGK G KSSTKSYESN+PSS+ PEKQ 
Sbjct: 121 TSESLYIEKTSNVLDGQSISVDNQDQRSREQYHDGKQGGKSSTKSYESNHPSSHAPEKQG 180

Query: 181 ANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIVSSES 230
           ANDGQ SG+Y+VGGSAFGWNFIAFTGTEPVYYG+TKE FREKNPIVSSES
Sbjct: 181 ANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFREKNPIVSSES 204

[Close]

BLAST of CaUC06G110380 vs. ExPASy TrEMBL
Match: A0A6J1H517 (uncharacterized protein LOC111460466 OS=Cucurbita moschata OX=3662 GN=LOC111460466 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 6.9e-85
Identity = 175/230 (76.09%), Postives = 190/230 (82.61%), Query Frame = 0


Query: 1   MEETKAPQSAPIQAPAPPTTAPSQPTQTLPPLPPKSKKRPLDRNAYIQYTKMRAVIRDLR 60
           MEE KAPQSAP+    PP+TAPSQPT  LPPLPPK KKRPLDRNAYIQYTKMRAVIRDLR
Sbjct: 1   MEEIKAPQSAPL----PPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLR 60

Query: 61  PHFLEDEFHFVSVFDTILLWFFFSLLKVLKTPDFRNCKAANEIRERIKVLQDMYVLMMAT 120
           PHFLE                      VLKTP+FRNCKAANEIRERIK+LQDMY++MMAT
Sbjct: 61  PHFLE----------------------VLKTPEFRNCKAANEIRERIKLLQDMYIMMMAT 120

Query: 121 TSETLYIEKTSNVLDGQSSSVDNQDRRPRER-HDGKLGDKSSTKSYESNNPSSYGPEKQR 180
           TSE+LYIEKTSNVLDGQS SVDNQD+R RE+ HDGK G KSSTKSYESN+PSS+ PEK  
Sbjct: 121 TSESLYIEKTSNVLDGQSLSVDNQDQRSREQHHDGKQGGKSSTKSYESNHPSSHAPEKHG 180

Query: 181 ANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIVSSES 230
           ANDGQ SG+Y+VGGSAFGWNFIAFTGTEPVYYG+TKE FR+KNPIVSSES
Sbjct: 181 ANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKEEFRKKNPIVSSES 204

[Close]

BLAST of CaUC06G110380 vs. ExPASy TrEMBL
Match: A0A1S3C7F7 (uncharacterized protein LOC103497729 OS=Cucumis melo OX=3656 GN=LOC103497729 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 5.8e-76
Identity = 166/229 (72.49%), Postives = 172/229 (75.11%), Query Frame = 0


Query: 1   MEETKAPQSAPIQAPAPPTTAPSQPTQTLPPLPPKSKKRPLDRNAYIQYTKMRAVIRDLR 60
           MEETK        A  PPTTAPS   QTLPPLPPK KKRPLDRNAY+Q+TKMRAVIRDLR
Sbjct: 1   MEETK--------AAVPPTTAPS---QTLPPLPPKLKKRPLDRNAYVQFTKMRAVIRDLR 60

Query: 61  PHFLEDEFHFVSVFDTILLWFFFSLLKVLKTPDFRNCKAANEIRERIKVLQDMYVLMMAT 120
           PHFLE                      V+KTPDFRNCKAA EIRERIKVLQDMY  MM+ 
Sbjct: 61  PHFLE----------------------VMKTPDFRNCKAATEIRERIKVLQDMYASMMSA 120

Query: 121 TSETLYIEKTSNVLDGQSSSVDNQDRRPRERHDGKLGDKSSTKSYESNNPSSYGPEKQRA 180
           TSETLYIEKT NVLDG +           + HDGKLGDKSSTKSYESNNPSSY PEKQRA
Sbjct: 121 TSETLYIEKTCNVLDGLAR---------EQHHDGKLGDKSSTKSYESNNPSSYAPEKQRA 180

Query: 181 NDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIVSSES 230
           NDG ISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPI SSES
Sbjct: 181 NDGPISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIDSSES 187

[Close]

BLAST of CaUC06G110380 vs. ExPASy TrEMBL
Match: A0A0A0K7F0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G003420 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 1.3e-72
Identity = 163/230 (70.87%), Postives = 169/230 (73.48%), Query Frame = 0


Query: 1   MEETKAPQSAPIQAPAPPTTAPSQPTQTLPPLPPKSKKRPLDRNAYIQYTKMRAVIRDLR 60
           MEETKA            TTAPS   QTLPPLPPK KKRP DRNAYIQ+TKMR VIRDLR
Sbjct: 1   MEETKA------------TTAPS---QTLPPLPPKLKKRPFDRNAYIQFTKMRTVIRDLR 60

Query: 61  PHFLEDEFHFVSVFDTILLWFFFSLLKVLKTPDFRNCKAANEIRERIKVLQDMYVLMMAT 120
           PHFLE                      V+KTPDFRNCKAA EIRERIKVLQD+Y +MMA 
Sbjct: 61  PHFLE----------------------VIKTPDFRNCKAATEIRERIKVLQDVYTMMMAA 120

Query: 121 TSETLYIEKT-SNVLDGQSSSVDNQDRRPRERHDGKLGDKSSTKSYESNNPSSYGPEKQR 180
           TSETLYIEKT SNVLDG +           + HDG LGDKSSTKSYESNNPSS  PEKQR
Sbjct: 121 TSETLYIEKTSSNVLDGLAR---------EQHHDGNLGDKSSTKSYESNNPSSNAPEKQR 180

Query: 181 ANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIVSSES 230
           ANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPI SSES
Sbjct: 181 ANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIDSSES 184

[Close]

BLAST of CaUC06G110380 vs. ExPASy TrEMBL
Match: A0A6J1DSC5 (uncharacterized protein LOC111023072 OS=Momordica charantia OX=3673 GN=LOC111023072 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 4.3e-71
Identity = 157/231 (67.97%), Postives = 173/231 (74.89%), Query Frame = 0


Query: 1   MEETKAPQSAPIQAPAPPTTAPSQPTQTLPPLPPKSKKRPLDRNAYIQYTKMRAVIRDLR 60
           MEE K   S P     P TTAPS PTQ LPPLPPKSKKRPLDR+ ++QY+KMRAVI+DLR
Sbjct: 1   MEEIKPAPSVP-----PQTTAPSPPTQPLPPLPPKSKKRPLDRSVFVQYSKMRAVIKDLR 60

Query: 61  PHFLEDEFHFVSVFDTILLWFFFSLLKVLKTPDFRNCKAANEIRERIKVLQDMYVLMMAT 120
           PHF+E                      VLK PDFRNCKAANEIRERIK+LQDMY LMMA+
Sbjct: 61  PHFVE----------------------VLKAPDFRNCKAANEIRERIKLLQDMYKLMMAS 120

Query: 121 TSETLYIEKTSNVLDGQSSSVDNQD-RRPRE-RHDGKLGDKSSTKSYESNNPSSYGPEKQ 180
           T+ETLYIEKT+N+LDGQS SVDNQD RRPRE  HD KLGDKSS +SYESN       EKQ
Sbjct: 121 TAETLYIEKTTNILDGQSLSVDNQDNRRPREPHHDVKLGDKSSVRSYESNY-----LEKQ 180

Query: 181 RANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKEVFREKNPIVSSES 230
           R NDG  SG+Y+VGGSAFGWNFI F G EPVYYG+TKE +REKNPIVSSES
Sbjct: 181 RVNDGHSSGAYIVGGSAFGWNFITFMGNEPVYYGVTKEAYREKNPIVSSES 199

[Close]

BLAST of CaUC06G110380 vs. TAIR 10
Match: AT1G01730.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 42 Blast hits to 42 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 1; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 88.6 bits (218), Expect = 7.2e-18
Identity = 83/245 (33.88%), Postives = 120/245 (48.98%), Query Frame = 0


Query: 6   APQSAPIQAPAPPTTA---------PSQPTQ-TLPPL------PPKSKKRPLDRNAYIQ- 65
           A  S P QAP  PT+A         P+QP Q T PP         + +KR L+ N  I+ 
Sbjct: 18  ATSSLPAQAPPLPTSADQRSAELPSPAQPAQMTAPPSTVTTDPSSRGRKRALEANLQIES 77

Query: 66  --YTKMRAVIRDLRPHFLEDEFHFVSVFDTILLWFFFSLLKVLKTPDFRNCKAANEIRER 125
             Y KMR +++DLRPH LE                      VL+TPD RN KA  EI+E+
Sbjct: 78  SNYYKMRLLVKDLRPHVLE----------------------VLRTPDLRNSKAVIEIQEK 137

Query: 126 IKVLQDMYVLMMATTSETLYIEKTSNVLDGQSSSVDNQDRRPRERHDGKLGDKSSTKSYE 185
           +K++  +Y  M+  + +    EKT+     +S S+ N               K++T +  
Sbjct: 138 MKLMLQLYEEMIGESPKR---EKTA-----KSDSLSN--------------GKATTTTTT 197

Query: 186 SNNPSSYGPEKQRANDGQISGSYVVGGSAFGWNFIAF--TGTEPVYYGITKEVFREKNPI 230
           + +       ++ ++DG   G  VVGGSAFGWNFI     GTEPVY G++KE +R  +PI
Sbjct: 198 TTSVLRSSETEKHSSDG--DGDKVVGGSAFGWNFITSGGPGTEPVYSGMSKEEYRSSHPI 216

The following BLAST results are available for this feature:

BLAST of CaUC06G110380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038874738.1	7.5e-94	84.35	uncharacterized protein LOC120067276 [Benincasa hispida]	[more]
KAG6575171.1	3.7e-85	76.52	hypothetical protein SDJN03_25810, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023006667.1	6.4e-85	76.96	uncharacterized protein LOC111499323 [Cucurbita maxima]	[more]
XP_023548253.1	8.3e-85	76.96	uncharacterized protein LOC111806942 [Cucurbita pepo subsp. pepo]	[more]
XP_022959506.1	1.4e-84	76.09	uncharacterized protein LOC111460466 [Cucurbita moschata]	[more]

BLAST of CaUC06G110380 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC06G110380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KWG6	3.1e-85	76.96	uncharacterized protein LOC111499323 OS=Cucurbita maxima OX=3661 GN=LOC111499323...	[more]
A0A6J1H517	6.9e-85	76.09	uncharacterized protein LOC111460466 OS=Cucurbita moschata OX=3662 GN=LOC1114604...	[more]
A0A1S3C7F7	5.8e-76	72.49	uncharacterized protein LOC103497729 OS=Cucumis melo OX=3656 GN=LOC103497729 PE=...	[more]
A0A0A0K7F0	1.3e-72	70.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G003420 PE=4 SV=1	[more]
A0A6J1DSC5	4.3e-71	67.97	uncharacterized protein LOC111023072 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]

BLAST of CaUC06G110380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01730.1	7.2e-18	33.88	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..181
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..181
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..35
None	No IPR available	PANTHER	PTHR35459	T1N6.14 PROTEIN	coord: 1..223

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC06G110380.1	CaUC06G110380.1	mRNA