CaUC06G110050 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTCACAGGCTGATTACATTGAGAAAATGCAGCTTCGTCAGAATTACAGAAATTTCTGGCATACTGATCTCACGGGCACCATTGCTGCCCATCCACCTTGTATGCTTGTAATTTTGTTGTTTAATTGATTAGATTTTTGGGATGAACTGATTGATTGAGAAGAATGTTGAAAATCTTGGGTTTGTAGTTGATTCTTTAGTTGGGTTTTCTTTCTCTGTTTTTTTTAATGAGATAGGGTAAAAGTTATCTAAATCGAATCATCGTTGATTTTGGGTTTAATGACTTTTTAGCTTTCTCTGGCTCTGTTCCTTTCCATGTGATTAAAAATGGCGGCTGTTGGTTCATGACGGGTATTCTTTGTTTGAGGGTATCAAATAGTATGGTTCATCTCAAAATTAATTGACAATGAGTAGAGTAGCCCATCTATCTTATTAAGAGTATGAGGTCCAATTTTTCCAATGTAGGATCTCAACAGAGGGGTTTCTAATTAGAATACTCATTTGTTTATTTTGCTAAATATCTTGATCTTGCTTGACCAAGGAAATGCATATTGGTTTTATTTCAGTTTCACCGTATTAAATTTCAGCATTAGTCAATTTTCTAAACATTAACGTTATTTTCATTCTTCTGTTTTGCAGATTGTTGCTTTTCTATATTCTGGTAAGGTGTTTGTTCTCTGATGAGTTCCCTGTCATAGTTTGGATTTCAGTAATTGAAAAGAATTGTTAAGTTGTAGATGTGTGTGTTCTTAACTCTATAATGCAATGAAATATTCTGCTACTTGCCTGTTTAGTAAACAAAATTGAGAGGCCATCTAATTGGTCTTTACTTTTAACATTCATGGCTTCAAAAGAATGTAAATATGTGTTAGCTTTATATATAGTGTTTAAAATGGTAATGGTTTATCTTGCTTTTGAGTTTTGTAGAGTACTTTGATATGGTTTTTCTTACAATGGTTCTTGATTTTGTGAAAAGTGGCCCGTGTGTTTCTTACCTTCTGCGCAAACGAGCTCTTTACAATGATATGTCAAGGTATTTTCAACGAATATTTGTAATTTTACCATTAGATAAAGTCTGTGCCATGGCTGATCCTTTTGATTAATCTATCACAGATACACATGCTGTGGTGGCTACATGCCTTGCAGTGGCAAGTGTGGAGAAAGTCACTGCCCTGAAGCTTGTCTTTGCACCGAGGTACGGTTATCGGTTGAGAACCATCATCTCCTTTGAGCCTCTAGTTATCTTCTATGTGATCCAGTTTGAAGAATTCTGCATTTTGGTTTTGTACTCTATTCAGGTTTTCTGTTGCTTTGCTAATTCAGTTGCATCAACACGTTTCATGTTGCAAGACGAGTTCAATATACAGACAACTGAGTGTGATAACTGCATCATTGTATGGTTTCCTCTCTCGATCCATTTATTCATTAAGTTGCTCGTACCTTGTTCTTCTCTCCCTCTAACAAGTTTGCATTTCTTTGCAGGGCTTTATGTTATGCCTCTCACAACTTGCTTGCATATGCTCCATAATTGCTTGCTTGCTTGGAAGTGAAGAACTTCAAGAGGCCTCAGATATAGTGTCCTTTTTATCTAATCTCGTATACTGCACGTAAGGGGGTTGCATTTCAATCTTCTTAATTCATAATGGCATGAATGTGTTTTTTTTTTATTATTATTATTTTTTTATTTATTTTTTTTAATATTTTGAATTATACTTTTATTTACGTATTTGTTTCATTTATCTTGCAGAGTGTGTGCGTGTATGCAGGTACATCCGAACTTTAAAAAGCTTAAAAAATTAATGACATCCTATGTTCTGTAGTGTATATATACTATATAGATTTCCTTATCTTATGGATATATGGACGTATTAATCTCTCGAGATACATAAATCTAAGTTATGTTTATTTAGAATACGAAACTTAGCTTTACATAATTCATGTCAACTTTTAGAAGTCATAACTCGCCAGCAAAAGATACGTTACACAAACCAAGATTTCTACATCGCATGCTTCACCATTTAAATACAGATTACACAAACTTGGGCTTCCAAAACTGTGAATCATACTTGCCTTGAAGAGGTTTACTCATAGCACTTTACTTTTCTTCAAATATATATCATAGAGAGTTTAAAAAGCTGTACGTATGCCTGGTATATAGATGTGCTTATCCTAGGCTATTGGTTTCTTAACCTTATGAACCACATAAACTTATGTTTATGAAATTTGCCTTTTGTATAGCATATTACAAGTTGTAATCCATAAACCAAACCACCAACACTTCTCTTTGCTTGAAACATATCATTGTTCTGATGATTTTCTTGTATTTTTATGTGTGTTAGTTTGTTATACTTGAATTCTCTGTAGTAGCATGTATGACATCTGCAGTTAAACTAGTAATCAGTATACTGCTTTTCTGATGGTGTTAATATGGAGAACCGCAGACACAACACAAGCTTGAGTTAGATAAAAGAGATGGCAGGTTTGGACCCCAACCAGCCATGGCTGTGCCTCCCACTCAGCAGATGTCTCGGATCAATCAGCCGATTCCTCCTCCGGTTGTATATCCTCCTCCTGCAGCATATGGACAACCGTTCGGACAACCACCCCCTCCCCTTGTTCAAGGCTACCCACTGCTTCCCCCTCATCCGGCTCAAAGCTACCCACCCCCTCCTCAATTTCAAGGCTATCCGCCACCGGGTTATCCTCCGCAGCCACCTCCGGGTCAATACAGGTGATTTGTTCCACATTGTTTTCCAAATATGTGAACTAAAGATTTGCAAATTGTTTGTGTGAATTGTGGTAGCTGTTGTCTAAATCTCTCTCCCTACAGTAATGGGACTCTACTCTGCTTATGTTTGATGTTGTTTACTCCTCTATGCTTCATTGTTGAAACTTTTATCTTGATCTTTTATGTATACTAGTCCTTTATGCTCAAGTCTTAAAAATATTAAGTTATATTATATGAAGTCTCTTAAAGAAATCTACTCATACTAAATTGATTGTTATTTAA ATGGCGTCACAGGCTGATTACATTGAGAAAATGCAGCTTCGTCAGAATTACAGAAATTTCTGGCATACTGATCTCACGGGCACCATTGCTGCCCATCCACCTTGTATGCTTATTGTTGCTTTTCTATATTCTGAGTACTTTGATATGGTTTTTCTTACAATGGTTCTTGATTTTGTGAAAAGTGGCCCGTGTGTTTCTTACCTTCTGCGCAAACGAGCTCTTTACAATGATATGTCAAGATACACATGCTGTGGTGGCTACATGCCTTGCAGTGGCAAGTGTGGAGAAAGTCACTGCCCTGAAGCTTGTCTTTGCACCGAGGTTTTCTGTTGCTTTGCTAATTCAGTTGCATCAACACGTTTCATGTTGCAAGACGAGTTCAATATACAGACAACTGAGTGTGATAACTGCATCATTGGCTTTATGTTATGCCTCTCACAACTTGCTTGCATATGCTCCATAATTGCTTGCTTGCTTGGAAGTGAAGAACTTCAAGAGGCCTCAGATATAGTGTCCTTTTTATCTAATCTCGTATACTGCACAGTGTGTGCGTGTATGCAGTTTGTTATACTTGAATTCTCTGTAGTAGCATGTATGACATCTGCAGTTAAACTAACACAACACAAGCTTGAGTTAGATAAAAGAGATGGCAGGTTTGGACCCCAACCAGCCATGGCTGTGCCTCCCACTCAGCAGATGTCTCGGATCAATCAGCCGATTCCTCCTCCGGTTGTATATCCTCCTCCTGCAGCATATGGACAACCGTTCGGACAACCACCCCCTCCCCTTGTTCAAGGCTACCCACTGCTTCCCCCTCATCCGGCTCAAAGCTACCCACCCCCTCCTCAATTTCAAGGCTATCCGCCACCGGGTTATCCTCCGCAGCCACCTCCGGGTCAATACAGTCTCTTAAAGAAATCTACTCATACTAAATTGATTGTTATTTAA ATGGCGTCACAGGCTGATTACATTGAGAAAATGCAGCTTCGTCAGAATTACAGAAATTTCTGGCATACTGATCTCACGGGCACCATTGCTGCCCATCCACCTTGTATGCTTATTGTTGCTTTTCTATATTCTGAGTACTTTGATATGGTTTTTCTTACAATGGTTCTTGATTTTGTGAAAAGTGGCCCGTGTGTTTCTTACCTTCTGCGCAAACGAGCTCTTTACAATGATATGTCAAGATACACATGCTGTGGTGGCTACATGCCTTGCAGTGGCAAGTGTGGAGAAAGTCACTGCCCTGAAGCTTGTCTTTGCACCGAGGTTTTCTGTTGCTTTGCTAATTCAGTTGCATCAACACGTTTCATGTTGCAAGACGAGTTCAATATACAGACAACTGAGTGTGATAACTGCATCATTGGCTTTATGTTATGCCTCTCACAACTTGCTTGCATATGCTCCATAATTGCTTGCTTGCTTGGAAGTGAAGAACTTCAAGAGGCCTCAGATATAGTGTCCTTTTTATCTAATCTCGTATACTGCACAGTGTGTGCGTGTATGCAGTTTGTTATACTTGAATTCTCTGTAGTAGCATGTATGACATCTGCAGTTAAACTAACACAACACAAGCTTGAGTTAGATAAAAGAGATGGCAGGTTTGGACCCCAACCAGCCATGGCTGTGCCTCCCACTCAGCAGATGTCTCGGATCAATCAGCCGATTCCTCCTCCGGTTGTATATCCTCCTCCTGCAGCATATGGACAACCGTTCGGACAACCACCCCCTCCCCTTGTTCAAGGCTACCCACTGCTTCCCCCTCATCCGGCTCAAAGCTACCCACCCCCTCCTCAATTTCAAGGCTATCCGCCACCGGGTTATCCTCCGCAGCCACCTCCGGGTCAATACAGTCTCTTAAAGAAATCTACTCATACTAAATTGATTGTTATTTAA MASQADYIEKMQLRQNYRNFWHTDLTGTIAAHPPCMLIVAFLYSEYFDMVFLTMVLDFVKSGPCVSYLLRKRALYNDMSRYTCCGGYMPCSGKCGESHCPEACLCTEVFCCFANSVASTRFMLQDEFNIQTTECDNCIIGFMLCLSQLACICSIIACLLGSEELQEASDIVSFLSNLVYCTVCACMQFVILEFSVVACMTSAVKLTQHKLELDKRDGRFGPQPAMAVPPTQQMSRINQPIPPPVVYPPPAAYGQPFGQPPPPLVQGYPLLPPHPAQSYPPPPQFQGYPPPGYPPQPPPGQYSLLKKSTHTKLIVI Homology
BLAST of CaUC06G110050 vs. NCBI nr
Match: XP_038875430.1 (uncharacterized protein LOC120067891 isoform X1 [Benincasa hispida] >XP_038875431.1 uncharacterized protein LOC120067891 isoform X1 [Benincasa hispida]) HSP 1 Score: 455.3 bits (1170), Expect = 4.3e-124 Identity = 237/302 (78.48%), Postives = 242/302 (80.13%), Query Frame = 0
BLAST of CaUC06G110050 vs. NCBI nr
Match: KAG7013754.1 (hypothetical protein SDJN02_23921, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 439.1 bits (1128), Expect = 3.2e-119 Identity = 227/312 (72.76%), Postives = 241/312 (77.24%), Query Frame = 0
BLAST of CaUC06G110050 vs. NCBI nr
Match: XP_022964021.1 (leucine-rich repeat extensin-like protein 2 [Cucurbita moschata]) HSP 1 Score: 416.8 bits (1070), Expect = 1.7e-112 Identity = 226/320 (70.62%), Postives = 235/320 (73.44%), Query Frame = 0
BLAST of CaUC06G110050 vs. NCBI nr
Match: KAG6593658.1 (hypothetical protein SDJN03_13134, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 414.1 bits (1063), Expect = 1.1e-111 Identity = 226/312 (72.44%), Postives = 235/312 (75.32%), Query Frame = 0
BLAST of CaUC06G110050 vs. NCBI nr
Match: XP_004138581.1 (uncharacterized protein LOC101221132 [Cucumis sativus] >KGN45682.1 hypothetical protein Csa_005223 [Cucumis sativus]) HSP 1 Score: 410.2 bits (1053), Expect = 1.6e-110 Identity = 219/305 (71.80%), Postives = 232/305 (76.07%), Query Frame = 0
BLAST of CaUC06G110050 vs. ExPASy TrEMBL
Match: A0A6J1HHP6 (leucine-rich repeat extensin-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111464171 PE=4 SV=1) HSP 1 Score: 416.8 bits (1070), Expect = 8.2e-113 Identity = 226/320 (70.62%), Postives = 235/320 (73.44%), Query Frame = 0
BLAST of CaUC06G110050 vs. ExPASy TrEMBL
Match: A0A0A0KBB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G006690 PE=4 SV=1) HSP 1 Score: 410.2 bits (1053), Expect = 7.7e-111 Identity = 219/305 (71.80%), Postives = 232/305 (76.07%), Query Frame = 0
BLAST of CaUC06G110050 vs. ExPASy TrEMBL
Match: A0A6J1KKE2 (leucine-rich repeat extensin-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111494826 PE=4 SV=1) HSP 1 Score: 409.1 bits (1050), Expect = 1.7e-110 Identity = 224/312 (71.79%), Postives = 233/312 (74.68%), Query Frame = 0
BLAST of CaUC06G110050 vs. ExPASy TrEMBL
Match: A0A5D3BTP0 (Survival motor neuron protein-like isoform X4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G001280 PE=4 SV=1) HSP 1 Score: 397.5 bits (1020), Expect = 5.2e-107 Identity = 217/308 (70.45%), Postives = 227/308 (73.70%), Query Frame = 0
BLAST of CaUC06G110050 vs. ExPASy TrEMBL
Match: A0A1S3C791 (survival motor neuron protein-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC103497697 PE=4 SV=1) HSP 1 Score: 397.5 bits (1020), Expect = 5.2e-107 Identity = 217/308 (70.45%), Postives = 227/308 (73.70%), Query Frame = 0
BLAST of CaUC06G110050 vs. TAIR 10
Match: AT5G41390.1 (PLAC8 family protein ) HSP 1 Score: 308.9 bits (790), Expect = 4.6e-84 Identity = 174/301 (57.81%), Postives = 202/301 (67.11%), Query Frame = 0
BLAST of CaUC06G110050 vs. TAIR 10
Match: AT1G63830.2 (PLAC8 family protein ) HSP 1 Score: 308.1 bits (788), Expect = 7.9e-84 Identity = 166/293 (56.66%), Postives = 191/293 (65.19%), Query Frame = 0
BLAST of CaUC06G110050 vs. TAIR 10
Match: AT1G63830.1 (PLAC8 family protein ) HSP 1 Score: 308.1 bits (788), Expect = 7.9e-84 Identity = 166/293 (56.66%), Postives = 191/293 (65.19%), Query Frame = 0
BLAST of CaUC06G110050 vs. TAIR 10
Match: AT1G63830.3 (PLAC8 family protein ) HSP 1 Score: 308.1 bits (788), Expect = 7.9e-84 Identity = 166/293 (56.66%), Postives = 191/293 (65.19%), Query Frame = 0
BLAST of CaUC06G110050 vs. TAIR 10
Match: AT4G23470.1 (PLAC8 family protein ) HSP 1 Score: 294.7 bits (753), Expect = 9.0e-80 Identity = 164/289 (56.75%), Postives = 191/289 (66.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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