CaUC06G109930 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC06G109930
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Reticulon-like protein
Location	Ciama_Chr06: 4216047 .. 4218942 (-)
RNA-Seq Expression	CaUC06G109930
Synteny	CaUC06G109930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCGTCGTCATTCTACACTCTGCCGCTGCCACGTACTTCAAAACGCCACCTCTTTCACCAATATAATAAATTTCTCATTGTCTTCTAAATTTCTCCGATTCTTGTTTTAGTTTCCAAAGCACTACCGTTTGACATTGCCGATGGCGGAGCCCTCTGAAACCGTAGAACCGAAGGCGGTGGAAATCGCCGATAATAATTCCGAACCCCTTCCTTCTCCGCCGTCCTCTAATTCCGACAAAGTGGACGCTTCTCCGCCGTTGCCGCCTGAGGGCTCTGAAATGTTGGGGAAAAAGCAATCTGTTCATCGTGTTCTTGGCGCCGGAAAACGTACGTATCTCTCTTTTTCTTTCTCTCCGTCTGTTCCAACTTTTTGGTTTCTTTTTTTAACTTTTTTTTTTTATTTTTTATTTTTTATTTATTTATAGAAAACATATGTTTTAGGTCCTAATTTTGTCTGAAATATACTTTTCAATTTGATTTTAGTTTAGTTTTTAAGTTTTAAAATATTATAATTTGACCCTTCACGTTCGAGTTTTGTTTCAACTTTTTACTATATAACTTCTTTTGAATTAAAATAATAATTTTAAAATTGATTGATTATCTTAATATTGATTTTGATAGTAATGAAAGAAATGGTGAAATTTAATTAATTGTAATTCTTTTAATTTATTATAATTAGTTATAAGAAAAATTATTTTAAAGGGTAAAACTGTTTAAAATATTTACAATTAATAGCAAAAATTTACCATACCCATGTATGCACGGTCTATATATGCTATAGATCGATATTTCTCTACCGTTATAATTCTTTTAATTTTTTTAAAAATTAATTAATAGTCAATAACCATTTGTAACAAGCCTTATTAAGGATCCAAGTTTAGGATTGTCTATACCAACAAAGTAAAGTGGCTCAATCAAGGAACTTCATAGCTTATAGATTACTATCATCTAAACAACCATTAGTGTCTATAGCTGGGTATTATTTGCTAATATTTTTAGCAGTTTTATCGTTCAAAACATTTATTCTTCCCCTAATTAGTCTCAAAATGAGTATTTAATATAAATCAGTATAAATCTTGAGATTCAGTACTAAGTTAAAATCAAACTCAAACCTTAATTCTATACAATAGTAACATTGGAATTTGTTGTCAAATACAAAAGCCTGTCAACTTAAAATTCAAAAAGCCAGAATGAGCATAAATGGCATAGTTTTGTTATATCAACTTCGAAGCTAGAGGTTTGGTTCTCTCATTTTGTATATTCTTAAAGAAAAAGAAGAAAGGTTGAATTTATATAATTTTGGGGGTGATAATGAAGTTGTGTGGACTTCTATTTTTAGAAATATTAAAGATTGGCATTGTTATGATTTATGTTTTGGGTAGCTGCGGACGTGTTGTTATGGCGGGACAAGAAGGCCTCTGCTGCGGTTGTGGGCGGAGCGACGGTAATTTGGGCCTTCTTTGAAGTGCTTCAATATCATTTGCTTCCGATTTTATGTTACGCCTTCATGTTGGTTATTGCCCTCCTCTTCCTTTGGTCCAATGCCCATATATTTATTTACAAGTAAGTTTCACTAACTCAAATCTCTCTCCCAACATCTACTTTTTATCAATCCAATCATTAAGGATCCGTTTGGTAACCATTTTTTTTTAATGGGTTTAATCTTGTGCATTAATACTTGGTGAATATAGTGAAAATTGATAAACACCAAATTTGAGAAGTCTTAATAACAACATTATACTTGAACCTGTTACAAAGTTTCCAGTGCATTATTAACAGGAGCCCGCCTCATCTTCCCGAAGTTAGTATTAAGGAGGAGCCATTGCTGCAGGTAGCTTCTGCAGCAAGGATCGAGATCAATCGGGCCATTGGGATGTTGCGCGATATCGCATCCGGGAGAGATGTGAAGAAGTTTCTTGCTGTAAGTTCTGTTTAAATAAACTGCCAAATGCACTTGCTTTCAATACTACAAACCTATTCAAGTCAAGCCTACTTAGATTGAGTTTTGTTGTTTCTTGATCCAACAAATGAAGCATCCATTCTTTTGATATTTCTAGATTTGTTTTAGTATTCTTTACAACTTTTGTTGCACTAGTAATAAATTCATAGAAATCAATCTAACCCTCAAATTAACAATCTAGTTGATCATATTTTTTTATTTATAAGATTAAGAAAAATGGTTATAATATGCTAAATTTGTGGGGTTTTTTTTTATTTATTTTTGAGCTAGTATTCTCTCTTCCTTTAATAAGGACTAGTTGCACTCAATCCATGCATGCAGCCCCCTTCTTTACATAGTAAAGAAAAAAAAAAATCAAATTTTAAAATTCATCTTTTTGCCACATACAGCATCTAAGTTCTTTGATTTAATCCTCTATTTCTATAATACCACCTATCCTTGTATGGTTCGATATACAGTTCATTTAGTTCGTTGGTGACCGTACGTATATAGATATAAATGTTTTTTTTTTTTTTTTTTTTTAATCTAACAATGATTTTTTTACAATGTCAGGTTGTTGTTGGCTTGTGGGTGCTATCAGTTATAGGAAATTGGTGCAATTTTTTGACTTTGTTTTACATAGGTAATACTTTCAACACACCCTCAAAAACTCTCCTTTAACATTACAACTTTACTGAATTACTCTCTTCTTCCTTTCTTCAGCTGTCGTACTGCTGCACACGGTGCCGGTCTTTTACGAGAAGTACAAGGATAAAATCGACTCGTTGGTAGAAAAGATTGTGGCCGAGAGTAAAAGGAAGTATGCAATTTTTAACGAGAAAGTTGTGAGTAAAGTTCCCAAAGGACCATTAAAAGACAAGAAGGATGATTAAAAAGAAAGGGGAGAAAAGAGAGGTATCTGTAGATTCTCTTATTATTCTGTGAAGTGAAGTGAAA

mRNA sequence

GCCGTCGTCATTCTACACTCTGCCGCTGCCACGTACTTCAAAACGCCACCTCTTTCACCAATATAATAAATTTCTCATTGTCTTCTAAATTTCTCCGATTCTTGTTTTAGTTTCCAAAGCACTACCGTTTGACATTGCCGATGGCGGAGCCCTCTGAAACCGTAGAACCGAAGGCGGTGGAAATCGCCGATAATAATTCCGAACCCCTTCCTTCTCCGCCGTCCTCTAATTCCGACAAAGTGGACGCTTCTCCGCCGTTGCCGCCTGAGGGCTCTGAAATGTTGGGGAAAAAGCAATCTGTTCATCGTGTTCTTGGCGCCGGAAAACCTGCGGACGTGTTGTTATGGCGGGACAAGAAGGCCTCTGCTGCGGTTGTGGGCGGAGCGACGGTAATTTGGGCCTTCTTTGAAGTGCTTCAATATCATTTGCTTCCGATTTTATGTTACGCCTTCATGTTGGTTATTGCCCTCCTCTTCCTTTGGTCCAATGCCCATATATTTATTTACAAGAGCCCGCCTCATCTTCCCGAAGTTAGTATTAAGGAGGAGCCATTGCTGCAGGTAGCTTCTGCAGCAAGGATCGAGATCAATCGGGCCATTGGGATGTTGCGCGATATCGCATCCGGGAGAGATGTGAAGAAGTTTCTTGCTGTTGTTGTTGGCTTGTGGGTGCTATCAGTTATAGGAAATTGGTGCAATTTTTTGACTTTGTTTTACATAGCTGTCGTACTGCTGCACACGGTGCCGGTCTTTTACGAGAAGTACAAGGATAAAATCGACTCGTTGGTAGAAAAGATTGTGGCCGAGAGTAAAAGGAAGTATGCAATTTTTAACGAGAAAGTTGTGAGTAAAGTTCCCAAAGGACCATTAAAAGACAAGAAGGATGATTAAAAAGAAAGGGGAGAAAAGAGAGGTATCTGTAGATTCTCTTATTATTCTGTGAAGTGAAGTGAAA

Coding sequence (CDS)

ATGGCGGAGCCCTCTGAAACCGTAGAACCGAAGGCGGTGGAAATCGCCGATAATAATTCCGAACCCCTTCCTTCTCCGCCGTCCTCTAATTCCGACAAAGTGGACGCTTCTCCGCCGTTGCCGCCTGAGGGCTCTGAAATGTTGGGGAAAAAGCAATCTGTTCATCGTGTTCTTGGCGCCGGAAAACCTGCGGACGTGTTGTTATGGCGGGACAAGAAGGCCTCTGCTGCGGTTGTGGGCGGAGCGACGGTAATTTGGGCCTTCTTTGAAGTGCTTCAATATCATTTGCTTCCGATTTTATGTTACGCCTTCATGTTGGTTATTGCCCTCCTCTTCCTTTGGTCCAATGCCCATATATTTATTTACAAGAGCCCGCCTCATCTTCCCGAAGTTAGTATTAAGGAGGAGCCATTGCTGCAGGTAGCTTCTGCAGCAAGGATCGAGATCAATCGGGCCATTGGGATGTTGCGCGATATCGCATCCGGGAGAGATGTGAAGAAGTTTCTTGCTGTTGTTGTTGGCTTGTGGGTGCTATCAGTTATAGGAAATTGGTGCAATTTTTTGACTTTGTTTTACATAGCTGTCGTACTGCTGCACACGGTGCCGGTCTTTTACGAGAAGTACAAGGATAAAATCGACTCGTTGGTAGAAAAGATTGTGGCCGAGAGTAAAAGGAAGTATGCAATTTTTAACGAGAAAGTTGTGAGTAAAGTTCCCAAAGGACCATTAAAAGACAAGAAGGATGATTAA

Protein sequence

MAEPSETVEPKAVEIADNNSEPLPSPPSSNSDKVDASPPLPPEGSEMLGKKQSVHRVLGAGKPADVLLWRDKKASAAVVGGATVIWAFFEVLQYHLLPILCYAFMLVIALLFLWSNAHIFIYKSPPHLPEVSIKEEPLLQVASAARIEINRAIGMLRDIASGRDVKKFLAVVVGLWVLSVIGNWCNFLTLFYIAVVLLHTVPVFYEKYKDKIDSLVEKIVAESKRKYAIFNEKVVSKVPKGPLKDKKDD

Homology

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BLAST of CaUC06G109930 vs. NCBI nr
Match: XP_038907010.1 (reticulon-like protein B2 [Benincasa hispida])

HSP 1 Score: 403.7 bits (1036), Expect = 1.2e-108
Identity = 214/253 (84.58%), Postives = 224/253 (88.54%), Query Frame = 0


Query: 1   MAEPSETVEPKAVEIADNNSEPLPSPPSSNSDKVDASPPLP-----PEGSEMLGKKQSVH 60
           MAEPSET EPK VEIAD  +EPLPS PSSNSD+VDASPPLP      EGSEMLGKKQSVH
Sbjct: 1   MAEPSETAEPKTVEIADKITEPLPSLPSSNSDEVDASPPLPTEEAAAEGSEMLGKKQSVH 60

Query: 61  RVLGAGKPADVLLWRDKKASAAVVGGATVIWAFFEVLQYHLLPILCYAFMLVIALLFLWS 120
           RVLGAGKPADVLLWRDKKAS AV+GGAT+IWAFFEVL+YHLLPILCYA +LV+ALLFLWS
Sbjct: 61  RVLGAGKPADVLLWRDKKASVAVLGGATIIWAFFEVLEYHLLPILCYALILVVALLFLWS 120

Query: 121 NAHIFIYKSPPHLPEVSIKEEPLLQVASAARIEINRAIGMLRDIASGRDVKKFLAVVVGL 180
           NAH FIYKSPPHLPEV IKEEPLL V SAARIEINRAI MLRDIASGRDVKKF AVVVGL
Sbjct: 121 NAHFFIYKSPPHLPEVRIKEEPLLHVVSAARIEINRAIAMLRDIASGRDVKKFFAVVVGL 180

Query: 181 WVLSVIGNWCNFLTLFYIAVVLLHTVPVFYEKYKDKIDSLVEKIVAESKRKYAIFNEKVV 240
           WVLSV+GNWCNFLTLFYI VVLLH VPVFYEKYK KIDS  EKIVAESK+K AIFNEKV 
Sbjct: 181 WVLSVVGNWCNFLTLFYIVVVLLHMVPVFYEKYKGKIDSFAEKIVAESKKKCAIFNEKVA 240

Query: 241 SKVPKGPLKDKKD 249
           SK  KG L+DKKD
Sbjct: 241 SKFSKGQLRDKKD 253

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BLAST of CaUC06G109930 vs. NCBI nr
Match: XP_008458672.1 (PREDICTED: reticulon-like protein B2 [Cucumis melo] >TYK14030.1 reticulon-like protein B2 [Cucumis melo var. makuwa])

HSP 1 Score: 367.1 bits (941), Expect = 1.2e-97
Identity = 199/256 (77.73%), Postives = 221/256 (86.33%), Query Frame = 0


Query: 1   MAEPSETVEPKAVEIAD----NNSEPL-PSPP-SSNSDKVDASPP--LPPEGSEMLGKKQ 60
           MA+PSETV+PKAVEIAD    N+ +P+ PSPP SSNSDKVD SPP     E SEML KKQ
Sbjct: 1   MADPSETVQPKAVEIADDNINNDQQPITPSPPLSSNSDKVDHSPPEDEAAESSEMLRKKQ 60

Query: 61  SVHRVLGAGKPADVLLWRDKKASAAVVGGATVIWAFFEVLQYHLLPILCYAFMLVIALLF 120
            VHRVLG+GK AD  LWRDKK S A VGGAT++WAFFE+L+YHLLPILCYA ++V+ALLF
Sbjct: 61  PVHRVLGSGKLADAFLWRDKKVSVAFVGGATIVWAFFELLEYHLLPILCYALIVVVALLF 120

Query: 121 LWSNAHIFIYKSPPHLPEVSIKEEPLLQVASAARIEINRAIGMLRDIASGRDVKKFLAVV 180
           LWSNAHIFIYKSPPHLPEV I+EEPLLQVASAARIEINRAI MLRD+ASGRDVKKFLAVV
Sbjct: 121 LWSNAHIFIYKSPPHLPEVRIREEPLLQVASAARIEINRAIAMLRDVASGRDVKKFLAVV 180

Query: 181 VGLWVLSVIGNWCNFLTLFYIAVVLLHTVPVFYEKYKDKIDSLVEKIVAESKRKYAIFNE 240
           VGLW LSV+G  CNFLTLFYI VVLLHTVPVFYEKYK KIDS +EKIVAESK+KY++FNE
Sbjct: 181 VGLWFLSVVGKRCNFLTLFYIVVVLLHTVPVFYEKYKYKIDSFMEKIVAESKKKYSVFNE 240

Query: 241 KVVSKVPKGPLKDKKD 249
           KV S+  K PL+DKKD
Sbjct: 241 KVASRFSKEPLRDKKD 256

[Close]

BLAST of CaUC06G109930 vs. NCBI nr
Match: XP_011656361.2 (reticulon-like protein B5 [Cucumis sativus] >KGN45697.1 hypothetical protein Csa_005724 [Cucumis sativus])

HSP 1 Score: 353.6 bits (906), Expect = 1.4e-93
Identity = 192/259 (74.13%), Postives = 215/259 (83.01%), Query Frame = 0


Query: 1   MAEPSETVEPKAVEIAD----NNSEPL-PS-PPSSNSDKVDASPPLPP-----EGSEMLG 60
           MA+ SETV+PKAVEIAD    N+  P+ PS PPSSN +K+D S PL P     E S+ML 
Sbjct: 1   MADSSETVQPKAVEIADDNINNDQHPITPSPPPSSNFNKMDHSLPLSPEDETAESSQMLE 60

Query: 61  KKQSVHRVLGAGKPADVLLWRDKKASAAVVGGATVIWAFFEVLQYHLLPILCYAFMLVIA 120
           KKQ VHRVLGAGK AD LLWRDKK S AVVGGAT++WAFFE+L+YHLLPILCYA ++V+A
Sbjct: 61  KKQPVHRVLGAGKLADGLLWRDKKVSVAVVGGATIVWAFFELLEYHLLPILCYALIVVVA 120

Query: 121 LLFLWSNAHIFIYKSPPHLPEVSIKEEPLLQVASAARIEINRAIGMLRDIASGRDVKKFL 180
           LLFLWSNAHI IYKSPPHLPEV I+EEP LQVASA R EINRAI +LRD+ASGRDVKKF+
Sbjct: 121 LLFLWSNAHILIYKSPPHLPEVRIREEPFLQVASAVRTEINRAIAILRDVASGRDVKKFI 180

Query: 181 AVVVGLWVLSVIGNWCNFLTLFYIAVVLLHTVPVFYEKYKDKIDSLVEKIVAESKRKYAI 240
           AVVVGLW LSV+GNWCNFLTLFYI VVLLH VPVFYEKYK KIDS  EKIVAE ++KY +
Sbjct: 181 AVVVGLWFLSVVGNWCNFLTLFYIVVVLLHMVPVFYEKYKYKIDSFAEKIVAEIRKKYTV 240

Query: 241 FNEKVVSKVPKGPLKDKKD 249
           FNEKV SK  K PL+DKKD
Sbjct: 241 FNEKVASKFSKEPLRDKKD 259

[Close]

BLAST of CaUC06G109930 vs. NCBI nr
Match: XP_022964049.1 (reticulon-like protein B1 [Cucurbita moschata])

HSP 1 Score: 345.5 bits (885), Expect = 3.8e-91
Identity = 180/246 (73.17%), Postives = 210/246 (85.37%), Query Frame = 0


Query: 9   EPKAVEIADNNSEPLPSPPSSNSD--KVDASPPLPP----EGSEMLGKKQSVHRVLGAGK 68
           EP AVE+AD  +EPL SPPS NSD  K+  SPP PP    +GS+M+  +Q VHRVLG GK
Sbjct: 11  EPMAVEVAD-QTEPLSSPPSHNSDAGKIADSPPSPPVEEAQGSKMVDSEQPVHRVLGGGK 70

Query: 69  PADVLLWRDKKASAAVVGGATVIWAFFEVLQYHLLPILCYAFMLVIALLFLWSNAHIFIY 128
           PADVLLW++KK SA ++GGAT IWAFFEVL+YHLLP++CYA +LV+ALLFLWSNAHIFIY
Sbjct: 71  PADVLLWKNKKISAGILGGATAIWAFFEVLEYHLLPLICYALILVVALLFLWSNAHIFIY 130

Query: 129 KSPPHLPEVSIKEEPLLQVASAARIEINRAIGMLRDIASGRDVKKFLAVVVGLWVLSVIG 188
           KSPPHLPEV IK+EP LQVASAAR  INRAI ML DIASGRDVKKFLAVV GLW+LSVIG
Sbjct: 131 KSPPHLPEVRIKDEPFLQVASAARTMINRAIAMLGDIASGRDVKKFLAVVAGLWILSVIG 190

Query: 189 NWCNFLTLFYIAVVLLHTVPVFYEKYKDKIDSLVEKIVAESKRKYAIFNEKVVSKVPKGP 248
           +WCNFLTLFYIAVVLLHTVPV YEKYK KID+  ++I+ ESK++YA+FNEKVVSK+PKG 
Sbjct: 191 SWCNFLTLFYIAVVLLHTVPVVYEKYKGKIDTSAQRIMVESKKRYAVFNEKVVSKLPKGV 250

[Close]

BLAST of CaUC06G109930 vs. NCBI nr
Match: XP_023514697.1 (reticulon-like protein B1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 343.2 bits (879), Expect = 1.9e-90
Identity = 183/256 (71.48%), Postives = 214/256 (83.59%), Query Frame = 0


Query: 1   MAEPSET--VEPKAVEIADNNSEPLPSPPSSNSD--KVDASPPLPP----EGSEMLGKKQ 60
           MA+  ET   EP AVE+AD  +EPL SPPS NSD  K+  SPP PP    EGS+M+  +Q
Sbjct: 1   MADHLETKQSEPMAVEVAD-QTEPLSSPPSHNSDAGKIADSPPSPPVEEAEGSKMVDSEQ 60

Query: 61  SVHRVLGAGKPADVLLWRDKKASAAVVGGATVIWAFFEVLQYHLLPILCYAFMLVIALLF 120
            VHRVLG GKPADVLLW++KK SA ++GGAT IWAFFEVL+YHLLP++CYA +LV+ALLF
Sbjct: 61  PVHRVLGGGKPADVLLWKNKKISAGILGGATAIWAFFEVLEYHLLPLICYALILVVALLF 120

Query: 121 LWSNAHIFIYKSPPHLPEVSIKEEPLLQVASAARIEINRAIGMLRDIASGRDVKKFLAVV 180
           LWSNAHIFIYK+PPHLPEV IK+EP LQVASAAR  INRAI  L DIASGRDVKKFLAVV
Sbjct: 121 LWSNAHIFIYKTPPHLPEVRIKDEPFLQVASAARTMINRAIATLGDIASGRDVKKFLAVV 180

Query: 181 VGLWVLSVIGNWCNFLTLFYIAVVLLHTVPVFYEKYKDKIDSLVEKIVAESKRKYAIFNE 240
            GLW+LSVIG+WCNFLTLFYIAVVLLHTVPV YEKYK KID+  ++I+ ESK++YA+FNE
Sbjct: 181 AGLWILSVIGSWCNFLTLFYIAVVLLHTVPVVYEKYKGKIDTSAQRIMVESKKRYAVFNE 240

Query: 241 KVVSKVPKGPLKDKKD 249
           KVVSK+PKG  ++KK+
Sbjct: 241 KVVSKLPKGVFREKKE 255

[Close]

BLAST of CaUC06G109930 vs. ExPASy Swiss-Prot
Match: Q9SUT9 (Reticulon-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=RTNLB2 PE=1 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 5.2e-67
Identity = 131/233 (56.22%), Postives = 174/233 (74.68%), Query Frame = 0


Query: 19  NSEPLPSPPSSNSDKVDASPP--LPPEGSEMLGKKQSVHRVLGAGKPADVLLWRDKKASA 78
           +S    S    N  K  +S P  L  +   + G+++ VH+VLG GKPAD+ +W+DKK S 
Sbjct: 39  DSSSSSSSDDENEKKSSSSSPKSLKSKVYRLFGRERPVHKVLGGGKPADIFMWKDKKMSG 98

Query: 79  AVVGGATVIWAFFEVLQYHLLPILCYAFMLVIALLFLWSNAHIFIYKSPPHLPEVSIKEE 138
            V GGATV W  FE+++YHLL +LC+  ++ +A+LFLWSNA +FI+KSPP +PEV I EE
Sbjct: 99  GVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFIHKSPPKIPEVHIPEE 158

Query: 139 PLLQVASAARIEINRAIGMLRDIASGRDVKKFLAVVVGLWVLSVIGNWCNFLTLFYIAVV 198
           PLLQ+AS  RIEINR I  LR+IASGRD+KKFL+ + GLWVLS++G   +FLTL YIA+V
Sbjct: 159 PLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSILGGCYSFLTLAYIALV 218

Query: 199 LLHTVPVFYEKYKDKIDSLVEKIVAESKRKYAIFNEKVVSKVPKGPLKDKKDD 250
           LL TVP+FY+KY+DK+DS  EK +AE K++YA+ + KV SK+P+GPLKDKK D
Sbjct: 219 LLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAKVFSKIPRGPLKDKKKD 271

[Close]

BLAST of CaUC06G109930 vs. ExPASy Swiss-Prot
Match: Q9SUR3 (Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 8.3e-65
Identity = 130/235 (55.32%), Postives = 171/235 (72.77%), Query Frame = 0


Query: 25  SPPSSNSDKVD----ASPPLPPEGS------EMLGKKQSVHRVLGAGKPADVLLWRDKKA 84
           S  SS+SD  D       P  P  S       + G++Q VH+VLG GKPAD+ +W++KK 
Sbjct: 41  SSSSSSSDDEDEKKKTKKPSSPSSSMKSKVYRLFGREQPVHKVLGGGKPADIFMWKNKKM 100

Query: 85  SAAVVGGATVIWAFFEVLQYHLLPILCYAFMLVIALLFLWSNAHIFIYKSPPHLPEVSIK 144
           S  V+GGAT  W  FE+++YHLL +LC+  ++V+A+LFLWSNA +FI KSPP +PEV I 
Sbjct: 101 SGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNATMFINKSPPKIPEVHIP 160

Query: 145 EEPLLQVASAARIEINRAIGMLRDIASGRDVKKFLAVVVGLWVLSVIGNWCNFLTLFYIA 204
           EEP+LQ+AS  RIEINR    LR+IASGRD+KKFL  + GLWVLS++G   NFLTL YIA
Sbjct: 161 EEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWVLSILGGCFNFLTLAYIA 220

Query: 205 VVLLHTVPVFYEKYKDKIDSLVEKIVAESKRKYAIFNEKVVSKVPKGPLKDKKDD 250
           +VLL TVP+ Y+KY+DK+D L EK + E K++YA+ +EKV+SK+P GPLK+KK D
Sbjct: 221 LVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLDEKVLSKIPLGPLKNKKKD 275

[Close]

BLAST of CaUC06G109930 vs. ExPASy Swiss-Prot
Match: Q9FFS0 (Reticulon-like protein B4 OS=Arabidopsis thaliana OX=3702 GN=RTNLB4 PE=1 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 3.3e-61
Identity = 116/206 (56.31%), Postives = 154/206 (74.76%), Query Frame = 0


Query: 47  MLGKKQSVHRVLGAGKPADVLLWRDKKASAAVVGGATVIWAFFEVLQYHLLPILCYAFML 106
           + G+++ VH+VLG GKPAD+ LWR+KK S  V+G  T  W  FE+ +YHLL  LC+  + 
Sbjct: 52  LFGREKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIF 111

Query: 107 VIALLFLWSNAHIFIYKSPPHLPEVSIKEEPLLQVASAARIEINRAIGMLRDIASGRDVK 166
            +A LFLWSNA  FI+KS PH+PEV I E+P+LQ+ S  RIEINR + +LR+IASG+DVK
Sbjct: 112 ALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVK 171

Query: 167 KFLAVVVGLWVLSVIGNWCNFLTLFYIAVVLLHTVPVFYEKYKDKIDSLVEKIVAESKRK 226
           KF+ V+ GLWVLS+IG+  NFLTLFY A VLL T+PV YEKY+DK+D+  EK + E K++
Sbjct: 172 KFILVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQ 231

Query: 227 YAIFNE----KVVSKVPKGPLKDKKD 249
           YA+ +E    KV+SK+P+G L  KKD
Sbjct: 232 YAVLDEKVLRKVISKIPRGALNKKKD 257

[Close]

BLAST of CaUC06G109930 vs. ExPASy Swiss-Prot
Match: O82352 (Reticulon-like protein B5 OS=Arabidopsis thaliana OX=3702 GN=RTNLB5 PE=1 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 9.5e-61
Identity = 127/251 (50.60%), Postives = 171/251 (68.13%), Query Frame = 0


Query: 1   MAEPSETVEPKAVEIADNNSEPLPSPPSSNSDKVDASPPLPPEGSE-----MLGKKQSVH 60
           MAE  E   P    + +  SE +    SS+S + +   P  P   +     M G+++ VH
Sbjct: 1   MAEEIEKSVPTEESLMEKISEKIHHHDSSSSSESEYEKPDSPSAVKAKIYRMFGREKPVH 60

Query: 61  RVLGAGKPADVLLWRDKKASAAVVGGATVIWAFFEVLQYHLLPILCYAFMLVIALLFLWS 120
           +VLG GKPADV LWRDKK S AV+G AT IW  FE+++YHLL +LC+  +L +  LFLWS
Sbjct: 61  KVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWS 120

Query: 121 NAHIFIYKSPPHLPEVSIKEEPLLQVASAARIEINRAIGMLRDIASGRDVKKFLAVVVGL 180
           NAH  I K+ P +PE+ + EE  L VAS+ R E+N+A  +LR IA GRD+KKFL VVVGL
Sbjct: 121 NAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGL 180

Query: 181 WVLSVIGNWCNFLTLFYIAVVLLHTVPVFYEKYKDKIDSLVEKIVAESKRKYAIFNEKVV 240
           W++SV+GNW NFLTL YI  V+LHTVP+ YEK++DK+D L EK + E +++Y +F+EKV+
Sbjct: 181 WIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVL 240

Query: 241 SKVPKGPLKDK 247
           SK+P   LK K
Sbjct: 241 SKIPIASLKAK 251

[Close]

BLAST of CaUC06G109930 vs. ExPASy Swiss-Prot
Match: Q6DBN4 (Reticulon-like protein B6 OS=Arabidopsis thaliana OX=3702 GN=RTNLB6 PE=1 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 4.4e-58
Identity = 121/246 (49.19%), Postives = 169/246 (68.70%), Query Frame = 0


Query: 1   MAEPSETVEPKAVEIADNNSEPLPSPPSSNSDKVDASPPLPPEGSEMLGKKQSVHRVLGA 60
           M +    +E  A +I D++S    S   S  +K ++   L  +   + G+++ VH+VLG 
Sbjct: 9   MHKEESLMEKIADKIHDHDSS---SSSDSEHEKPESPSALKAKIYRLFGREKPVHKVLGG 68

Query: 61  GKPADVLLWRDKKASAAVVGGATVIWAFFEVLQYHLLPILCYAFMLVIALLFLWSNAHIF 120
           G PADV LWRDKK SA+V+G AT IW  FE+++YH L ++C+  +  +A LFL SNAH F
Sbjct: 69  GLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLSNAHAF 128

Query: 121 IYKSPPHLPEVSIKEEPLLQVASAARIEINRAIGMLRDIASGRDVKKFLAVVVGLWVLSV 180
           + K+PP +PE+ IKEE  L + SA R E+N+A  +LR IA GRD+KKFL VV GLW++SV
Sbjct: 129 MNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVFGLWIISV 188

Query: 181 IGNWCNFLTLFYIAVVLLHTVPVFYEKYKDKIDSLVEKIVAESKRKYAIFNEKVVSKVPK 240
           +GNW NFLTL YI  V+LHTVP+ YEK++DK+D + EK + E K+ Y +F+EKV+SK+P 
Sbjct: 189 VGNWFNFLTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDEKVLSKLPV 248

Query: 241 GPLKDK 247
             LK K
Sbjct: 249 ASLKAK 251

[Close]

BLAST of CaUC06G109930 vs. ExPASy TrEMBL
Match: A0A5D3CRK8 (Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold268G00270 PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 5.9e-98
Identity = 199/256 (77.73%), Postives = 221/256 (86.33%), Query Frame = 0


Query: 1   MAEPSETVEPKAVEIAD----NNSEPL-PSPP-SSNSDKVDASPP--LPPEGSEMLGKKQ 60
           MA+PSETV+PKAVEIAD    N+ +P+ PSPP SSNSDKVD SPP     E SEML KKQ
Sbjct: 1   MADPSETVQPKAVEIADDNINNDQQPITPSPPLSSNSDKVDHSPPEDEAAESSEMLRKKQ 60

Query: 61  SVHRVLGAGKPADVLLWRDKKASAAVVGGATVIWAFFEVLQYHLLPILCYAFMLVIALLF 120
            VHRVLG+GK AD  LWRDKK S A VGGAT++WAFFE+L+YHLLPILCYA ++V+ALLF
Sbjct: 61  PVHRVLGSGKLADAFLWRDKKVSVAFVGGATIVWAFFELLEYHLLPILCYALIVVVALLF 120

Query: 121 LWSNAHIFIYKSPPHLPEVSIKEEPLLQVASAARIEINRAIGMLRDIASGRDVKKFLAVV 180
           LWSNAHIFIYKSPPHLPEV I+EEPLLQVASAARIEINRAI MLRD+ASGRDVKKFLAVV
Sbjct: 121 LWSNAHIFIYKSPPHLPEVRIREEPLLQVASAARIEINRAIAMLRDVASGRDVKKFLAVV 180

Query: 181 VGLWVLSVIGNWCNFLTLFYIAVVLLHTVPVFYEKYKDKIDSLVEKIVAESKRKYAIFNE 240
           VGLW LSV+G  CNFLTLFYI VVLLHTVPVFYEKYK KIDS +EKIVAESK+KY++FNE
Sbjct: 181 VGLWFLSVVGKRCNFLTLFYIVVVLLHTVPVFYEKYKYKIDSFMEKIVAESKKKYSVFNE 240

Query: 241 KVVSKVPKGPLKDKKD 249
           KV S+  K PL+DKKD
Sbjct: 241 KVASRFSKEPLRDKKD 256

[Close]

BLAST of CaUC06G109930 vs. ExPASy TrEMBL
Match: A0A1S3C9M8 (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103498001 PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 5.9e-98
Identity = 199/256 (77.73%), Postives = 221/256 (86.33%), Query Frame = 0


Query: 1   MAEPSETVEPKAVEIAD----NNSEPL-PSPP-SSNSDKVDASPP--LPPEGSEMLGKKQ 60
           MA+PSETV+PKAVEIAD    N+ +P+ PSPP SSNSDKVD SPP     E SEML KKQ
Sbjct: 1   MADPSETVQPKAVEIADDNINNDQQPITPSPPLSSNSDKVDHSPPEDEAAESSEMLRKKQ 60

Query: 61  SVHRVLGAGKPADVLLWRDKKASAAVVGGATVIWAFFEVLQYHLLPILCYAFMLVIALLF 120
            VHRVLG+GK AD  LWRDKK S A VGGAT++WAFFE+L+YHLLPILCYA ++V+ALLF
Sbjct: 61  PVHRVLGSGKLADAFLWRDKKVSVAFVGGATIVWAFFELLEYHLLPILCYALIVVVALLF 120

Query: 121 LWSNAHIFIYKSPPHLPEVSIKEEPLLQVASAARIEINRAIGMLRDIASGRDVKKFLAVV 180
           LWSNAHIFIYKSPPHLPEV I+EEPLLQVASAARIEINRAI MLRD+ASGRDVKKFLAVV
Sbjct: 121 LWSNAHIFIYKSPPHLPEVRIREEPLLQVASAARIEINRAIAMLRDVASGRDVKKFLAVV 180

Query: 181 VGLWVLSVIGNWCNFLTLFYIAVVLLHTVPVFYEKYKDKIDSLVEKIVAESKRKYAIFNE 240
           VGLW LSV+G  CNFLTLFYI VVLLHTVPVFYEKYK KIDS +EKIVAESK+KY++FNE
Sbjct: 181 VGLWFLSVVGKRCNFLTLFYIVVVLLHTVPVFYEKYKYKIDSFMEKIVAESKKKYSVFNE 240

Query: 241 KVVSKVPKGPLKDKKD 249
           KV S+  K PL+DKKD
Sbjct: 241 KVASRFSKEPLRDKKD 256

[Close]

BLAST of CaUC06G109930 vs. ExPASy TrEMBL
Match: A0A0A0KBC8 (Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G006830 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 6.7e-94
Identity = 192/259 (74.13%), Postives = 215/259 (83.01%), Query Frame = 0


Query: 1   MAEPSETVEPKAVEIAD----NNSEPL-PS-PPSSNSDKVDASPPLPP-----EGSEMLG 60
           MA+ SETV+PKAVEIAD    N+  P+ PS PPSSN +K+D S PL P     E S+ML 
Sbjct: 1   MADSSETVQPKAVEIADDNINNDQHPITPSPPPSSNFNKMDHSLPLSPEDETAESSQMLE 60

Query: 61  KKQSVHRVLGAGKPADVLLWRDKKASAAVVGGATVIWAFFEVLQYHLLPILCYAFMLVIA 120
           KKQ VHRVLGAGK AD LLWRDKK S AVVGGAT++WAFFE+L+YHLLPILCYA ++V+A
Sbjct: 61  KKQPVHRVLGAGKLADGLLWRDKKVSVAVVGGATIVWAFFELLEYHLLPILCYALIVVVA 120

Query: 121 LLFLWSNAHIFIYKSPPHLPEVSIKEEPLLQVASAARIEINRAIGMLRDIASGRDVKKFL 180
           LLFLWSNAHI IYKSPPHLPEV I+EEP LQVASA R EINRAI +LRD+ASGRDVKKF+
Sbjct: 121 LLFLWSNAHILIYKSPPHLPEVRIREEPFLQVASAVRTEINRAIAILRDVASGRDVKKFI 180

Query: 181 AVVVGLWVLSVIGNWCNFLTLFYIAVVLLHTVPVFYEKYKDKIDSLVEKIVAESKRKYAI 240
           AVVVGLW LSV+GNWCNFLTLFYI VVLLH VPVFYEKYK KIDS  EKIVAE ++KY +
Sbjct: 181 AVVVGLWFLSVVGNWCNFLTLFYIVVVLLHMVPVFYEKYKYKIDSFAEKIVAEIRKKYTV 240

Query: 241 FNEKVVSKVPKGPLKDKKD 249
           FNEKV SK  K PL+DKKD
Sbjct: 241 FNEKVASKFSKEPLRDKKD 259

[Close]

BLAST of CaUC06G109930 vs. ExPASy TrEMBL
Match: A0A6J1HLZ6 (Reticulon-like protein OS=Cucurbita moschata OX=3662 GN=LOC111464192 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 1.8e-91
Identity = 180/246 (73.17%), Postives = 210/246 (85.37%), Query Frame = 0


Query: 9   EPKAVEIADNNSEPLPSPPSSNSD--KVDASPPLPP----EGSEMLGKKQSVHRVLGAGK 68
           EP AVE+AD  +EPL SPPS NSD  K+  SPP PP    +GS+M+  +Q VHRVLG GK
Sbjct: 11  EPMAVEVAD-QTEPLSSPPSHNSDAGKIADSPPSPPVEEAQGSKMVDSEQPVHRVLGGGK 70

Query: 69  PADVLLWRDKKASAAVVGGATVIWAFFEVLQYHLLPILCYAFMLVIALLFLWSNAHIFIY 128
           PADVLLW++KK SA ++GGAT IWAFFEVL+YHLLP++CYA +LV+ALLFLWSNAHIFIY
Sbjct: 71  PADVLLWKNKKISAGILGGATAIWAFFEVLEYHLLPLICYALILVVALLFLWSNAHIFIY 130

Query: 129 KSPPHLPEVSIKEEPLLQVASAARIEINRAIGMLRDIASGRDVKKFLAVVVGLWVLSVIG 188
           KSPPHLPEV IK+EP LQVASAAR  INRAI ML DIASGRDVKKFLAVV GLW+LSVIG
Sbjct: 131 KSPPHLPEVRIKDEPFLQVASAARTMINRAIAMLGDIASGRDVKKFLAVVAGLWILSVIG 190

Query: 189 NWCNFLTLFYIAVVLLHTVPVFYEKYKDKIDSLVEKIVAESKRKYAIFNEKVVSKVPKGP 248
           +WCNFLTLFYIAVVLLHTVPV YEKYK KID+  ++I+ ESK++YA+FNEKVVSK+PKG 
Sbjct: 191 SWCNFLTLFYIAVVLLHTVPVVYEKYKGKIDTSAQRIMVESKKRYAVFNEKVVSKLPKGV 250

[Close]

BLAST of CaUC06G109930 vs. ExPASy TrEMBL
Match: A0A6J1KJF7 (Reticulon-like protein OS=Cucurbita maxima OX=3661 GN=LOC111494548 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 5.9e-90
Identity = 180/246 (73.17%), Postives = 208/246 (84.55%), Query Frame = 0


Query: 9   EPKAVEIADNNSEPLPSPPSSNSD--KVDASPPLPP----EGSEMLGKKQSVHRVLGAGK 68
           EP AVE+AD  +EPL SPPS NSD  K+  SPP PP    +GS+M+  +Q VHRVLG GK
Sbjct: 11  EPMAVEVAD-QTEPLSSPPSHNSDAGKIADSPPSPPVEEAQGSKMVDSEQPVHRVLGGGK 70

Query: 69  PADVLLWRDKKASAAVVGGATVIWAFFEVLQYHLLPILCYAFMLVIALLFLWSNAHIFIY 128
           PADVLLW++KK SA V+ GATVIWAFFEVL+YHLLP++CYA +LV+ALLFLWSNAHIFIY
Sbjct: 71  PADVLLWKNKKISAGVLCGATVIWAFFEVLEYHLLPLICYALILVVALLFLWSNAHIFIY 130

Query: 129 KSPPHLPEVSIKEEPLLQVASAARIEINRAIGMLRDIASGRDVKKFLAVVVGLWVLSVIG 188
           KSPPHLPE  IK+EP LQVASAAR  INRAI  L DIASGRDVKKFLAVV GLWVLSVIG
Sbjct: 131 KSPPHLPEAHIKDEPFLQVASAARTVINRAIATLGDIASGRDVKKFLAVVAGLWVLSVIG 190

Query: 189 NWCNFLTLFYIAVVLLHTVPVFYEKYKDKIDSLVEKIVAESKRKYAIFNEKVVSKVPKGP 248
           +WCNFLTLFYIAVVLLHTVPV YEKYK KID+  ++I+ ESK++YA+FNEKVVSK+PKG 
Sbjct: 191 SWCNFLTLFYIAVVLLHTVPVVYEKYKGKIDTSAQRIMVESKKRYAVFNEKVVSKLPKGV 250

[Close]

BLAST of CaUC06G109930 vs. TAIR 10
Match: AT4G11220.1 (VIRB2-interacting protein 2 )

HSP 1 Score: 255.8 bits (652), Expect = 3.7e-68
Identity = 131/233 (56.22%), Postives = 174/233 (74.68%), Query Frame = 0


Query: 19  NSEPLPSPPSSNSDKVDASPP--LPPEGSEMLGKKQSVHRVLGAGKPADVLLWRDKKASA 78
           +S    S    N  K  +S P  L  +   + G+++ VH+VLG GKPAD+ +W+DKK S 
Sbjct: 39  DSSSSSSSDDENEKKSSSSSPKSLKSKVYRLFGRERPVHKVLGGGKPADIFMWKDKKMSG 98

Query: 79  AVVGGATVIWAFFEVLQYHLLPILCYAFMLVIALLFLWSNAHIFIYKSPPHLPEVSIKEE 138
            V GGATV W  FE+++YHLL +LC+  ++ +A+LFLWSNA +FI+KSPP +PEV I EE
Sbjct: 99  GVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFIHKSPPKIPEVHIPEE 158

Query: 139 PLLQVASAARIEINRAIGMLRDIASGRDVKKFLAVVVGLWVLSVIGNWCNFLTLFYIAVV 198
           PLLQ+AS  RIEINR I  LR+IASGRD+KKFL+ + GLWVLS++G   +FLTL YIA+V
Sbjct: 159 PLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSILGGCYSFLTLAYIALV 218

Query: 199 LLHTVPVFYEKYKDKIDSLVEKIVAESKRKYAIFNEKVVSKVPKGPLKDKKDD 250
           LL TVP+FY+KY+DK+DS  EK +AE K++YA+ + KV SK+P+GPLKDKK D
Sbjct: 219 LLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAKVFSKIPRGPLKDKKKD 271

[Close]

BLAST of CaUC06G109930 vs. TAIR 10
Match: AT4G23630.1 (VIRB2-interacting protein 1 )

HSP 1 Score: 248.4 bits (633), Expect = 5.9e-66
Identity = 130/235 (55.32%), Postives = 171/235 (72.77%), Query Frame = 0


Query: 25  SPPSSNSDKVD----ASPPLPPEGS------EMLGKKQSVHRVLGAGKPADVLLWRDKKA 84
           S  SS+SD  D       P  P  S       + G++Q VH+VLG GKPAD+ +W++KK 
Sbjct: 41  SSSSSSSDDEDEKKKTKKPSSPSSSMKSKVYRLFGREQPVHKVLGGGKPADIFMWKNKKM 100

Query: 85  SAAVVGGATVIWAFFEVLQYHLLPILCYAFMLVIALLFLWSNAHIFIYKSPPHLPEVSIK 144
           S  V+GGAT  W  FE+++YHLL +LC+  ++V+A+LFLWSNA +FI KSPP +PEV I 
Sbjct: 101 SGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNATMFINKSPPKIPEVHIP 160

Query: 145 EEPLLQVASAARIEINRAIGMLRDIASGRDVKKFLAVVVGLWVLSVIGNWCNFLTLFYIA 204
           EEP+LQ+AS  RIEINR    LR+IASGRD+KKFL  + GLWVLS++G   NFLTL YIA
Sbjct: 161 EEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWVLSILGGCFNFLTLAYIA 220

Query: 205 VVLLHTVPVFYEKYKDKIDSLVEKIVAESKRKYAIFNEKVVSKVPKGPLKDKKDD 250
           +VLL TVP+ Y+KY+DK+D L EK + E K++YA+ +EKV+SK+P GPLK+KK D
Sbjct: 221 LVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLDEKVLSKIPLGPLKNKKKD 275

[Close]

BLAST of CaUC06G109930 vs. TAIR 10
Match: AT5G41600.1 (VIRB2-interacting protein 3 )

HSP 1 Score: 236.5 bits (602), Expect = 2.3e-62
Identity = 116/206 (56.31%), Postives = 154/206 (74.76%), Query Frame = 0


Query: 47  MLGKKQSVHRVLGAGKPADVLLWRDKKASAAVVGGATVIWAFFEVLQYHLLPILCYAFML 106
           + G+++ VH+VLG GKPAD+ LWR+KK S  V+G  T  W  FE+ +YHLL  LC+  + 
Sbjct: 52  LFGREKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIF 111

Query: 107 VIALLFLWSNAHIFIYKSPPHLPEVSIKEEPLLQVASAARIEINRAIGMLRDIASGRDVK 166
            +A LFLWSNA  FI+KS PH+PEV I E+P+LQ+ S  RIEINR + +LR+IASG+DVK
Sbjct: 112 ALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVK 171

Query: 167 KFLAVVVGLWVLSVIGNWCNFLTLFYIAVVLLHTVPVFYEKYKDKIDSLVEKIVAESKRK 226
           KF+ V+ GLWVLS+IG+  NFLTLFY A VLL T+PV YEKY+DK+D+  EK + E K++
Sbjct: 172 KFILVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQ 231

Query: 227 YAIFNE----KVVSKVPKGPLKDKKD 249
           YA+ +E    KV+SK+P+G L  KKD
Sbjct: 232 YAVLDEKVLRKVISKIPRGALNKKKD 257

[Close]

BLAST of CaUC06G109930 vs. TAIR 10
Match: AT2G46170.1 (Reticulon family protein )

HSP 1 Score: 235.0 bits (598), Expect = 6.7e-62
Identity = 127/251 (50.60%), Postives = 171/251 (68.13%), Query Frame = 0


Query: 1   MAEPSETVEPKAVEIADNNSEPLPSPPSSNSDKVDASPPLPPEGSE-----MLGKKQSVH 60
           MAE  E   P    + +  SE +    SS+S + +   P  P   +     M G+++ VH
Sbjct: 1   MAEEIEKSVPTEESLMEKISEKIHHHDSSSSSESEYEKPDSPSAVKAKIYRMFGREKPVH 60

Query: 61  RVLGAGKPADVLLWRDKKASAAVVGGATVIWAFFEVLQYHLLPILCYAFMLVIALLFLWS 120
           +VLG GKPADV LWRDKK S AV+G AT IW  FE+++YHLL +LC+  +L +  LFLWS
Sbjct: 61  KVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWS 120

Query: 121 NAHIFIYKSPPHLPEVSIKEEPLLQVASAARIEINRAIGMLRDIASGRDVKKFLAVVVGL 180
           NAH  I K+ P +PE+ + EE  L VAS+ R E+N+A  +LR IA GRD+KKFL VVVGL
Sbjct: 121 NAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGL 180

Query: 181 WVLSVIGNWCNFLTLFYIAVVLLHTVPVFYEKYKDKIDSLVEKIVAESKRKYAIFNEKVV 240
           W++SV+GNW NFLTL YI  V+LHTVP+ YEK++DK+D L EK + E +++Y +F+EKV+
Sbjct: 181 WIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVL 240

Query: 241 SKVPKGPLKDK 247
           SK+P   LK K
Sbjct: 241 SKIPIASLKAK 251

[Close]

BLAST of CaUC06G109930 vs. TAIR 10
Match: AT3G61560.1 (Reticulon family protein )

HSP 1 Score: 226.1 bits (575), Expect = 3.1e-59
Identity = 121/246 (49.19%), Postives = 169/246 (68.70%), Query Frame = 0


Query: 1   MAEPSETVEPKAVEIADNNSEPLPSPPSSNSDKVDASPPLPPEGSEMLGKKQSVHRVLGA 60
           M +    +E  A +I D++S    S   S  +K ++   L  +   + G+++ VH+VLG 
Sbjct: 9   MHKEESLMEKIADKIHDHDSS---SSSDSEHEKPESPSALKAKIYRLFGREKPVHKVLGG 68

Query: 61  GKPADVLLWRDKKASAAVVGGATVIWAFFEVLQYHLLPILCYAFMLVIALLFLWSNAHIF 120
           G PADV LWRDKK SA+V+G AT IW  FE+++YH L ++C+  +  +A LFL SNAH F
Sbjct: 69  GLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLSNAHAF 128

Query: 121 IYKSPPHLPEVSIKEEPLLQVASAARIEINRAIGMLRDIASGRDVKKFLAVVVGLWVLSV 180
           + K+PP +PE+ IKEE  L + SA R E+N+A  +LR IA GRD+KKFL VV GLW++SV
Sbjct: 129 MNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVFGLWIISV 188

Query: 181 IGNWCNFLTLFYIAVVLLHTVPVFYEKYKDKIDSLVEKIVAESKRKYAIFNEKVVSKVPK 240
           +GNW NFLTL YI  V+LHTVP+ YEK++DK+D + EK + E K+ Y +F+EKV+SK+P 
Sbjct: 189 VGNWFNFLTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDEKVLSKLPV 248

Query: 241 GPLKDK 247
             LK K
Sbjct: 249 ASLKAK 251

The following BLAST results are available for this feature:

BLAST of CaUC06G109930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038907010.1	1.2e-108	84.58	reticulon-like protein B2 [Benincasa hispida]	[more]
XP_008458672.1	1.2e-97	77.73	PREDICTED: reticulon-like protein B2 [Cucumis melo] >TYK14030.1 reticulon-like p...	[more]
XP_011656361.2	1.4e-93	74.13	reticulon-like protein B5 [Cucumis sativus] >KGN45697.1 hypothetical protein Csa...	[more]
XP_022964049.1	3.8e-91	73.17	reticulon-like protein B1 [Cucurbita moschata]	[more]
XP_023514697.1	1.9e-90	71.48	reticulon-like protein B1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CaUC06G109930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SUT9	5.2e-67	56.22	Reticulon-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=RTNLB2 PE=1 SV=1	[more]
Q9SUR3	8.3e-65	55.32	Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1	[more]
Q9FFS0	3.3e-61	56.31	Reticulon-like protein B4 OS=Arabidopsis thaliana OX=3702 GN=RTNLB4 PE=1 SV=1	[more]
O82352	9.5e-61	50.60	Reticulon-like protein B5 OS=Arabidopsis thaliana OX=3702 GN=RTNLB5 PE=1 SV=1	[more]
Q6DBN4	4.4e-58	49.19	Reticulon-like protein B6 OS=Arabidopsis thaliana OX=3702 GN=RTNLB6 PE=1 SV=1	[more]

BLAST of CaUC06G109930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CRK8	5.9e-98	77.73	Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]
A0A1S3C9M8	5.9e-98	77.73	Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103498001 PE=4 SV=1	[more]
A0A0A0KBC8	6.7e-94	74.13	Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G006830 PE=4 SV=1	[more]
A0A6J1HLZ6	1.8e-91	73.17	Reticulon-like protein OS=Cucurbita moschata OX=3662 GN=LOC111464192 PE=4 SV=1	[more]
A0A6J1KJF7	5.9e-90	73.17	Reticulon-like protein OS=Cucurbita maxima OX=3661 GN=LOC111494548 PE=4 SV=1	[more]

BLAST of CaUC06G109930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G11220.1	3.7e-68	56.22	VIRB2-interacting protein 2	[more]
AT4G23630.1	5.9e-66	55.32	VIRB2-interacting protein 1	[more]
AT5G41600.1	2.3e-62	56.31	VIRB2-interacting protein 3	[more]
AT2G46170.1	6.7e-62	50.60	Reticulon family protein	[more]
AT3G61560.1	3.1e-59	49.19	Reticulon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 205..225
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..47
None	No IPR available	PANTHER	PTHR10994:SF153	RETICULON-LIKE PROTEIN B3-RELATED	coord: 14..248
IPR003388	Reticulon	PFAM	PF02453	Reticulon	coord: 64..219 e-value: 4.1E-55 score: 186.0
IPR003388	Reticulon	PROSITE	PS50845	RETICULON	coord: 63..249 score: 44.207745
IPR045064	Reticulon-like protein, plant	PANTHER	PTHR10994	RETICULON	coord: 14..248

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC06G109930.1	CaUC06G109930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009617	response to bacterium
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane