CaUC06G109550 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC06G109550
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionAlanine-tRNA ligase
LocationCiama_Chr06: 3716691 .. 3728749 (+)
RNA-Seq ExpressionCaUC06G109550
SyntenyCaUC06G109550
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGAAAGAAAAGAAAAAGCCCTCAACGCCAGCAGGAGCATCGAGCAGAACCCGGGGCGGGGCTCAGTGAAACCAAGTTTTTAGAATCGAGCATACATATATAATCCACCGAGGAAGAAACTCTGTTGCAATGGCGATGGATGCTGGATCATCGCCCTCCCAAGAAAATCAATCATTTTCTTCCCATCTCCATGAATCTTCTCCAGGAAAACCTCAATCATTGGAAGACTTAGCTAAGCCTTGGGCTGAGTACGCAGCTCAACAGGCCCTGCTATACCAGCGGGCTATCGACCAATCCTTGGAGTCTGCCATTCAAGCCTCCAAATCTCGCCTTTCTCAGATTCGTTCCGCCTCCTATCCTCATTTCCAGAAGGCCATTGTAATTTCTCTATCTCCGTTTTTCCCGTTGTTCTTTGTTTAGTTTCCAATTAAGAATGGATGTTAGTTTAGGTCTCCAAGAAAAAGGGATAGAAAGGTTTTGAATCGTTACTCCACCTCCAAATCTGTTTTTCCTGTTGTTCTCTATCTCTGGTTGACCGATGCTTGTTATGTATAATTTGATTTCATTATATCTAATAGTTAAAATAGCCCCAGTGGGTGGCCGTTGGCAAGGGCTTGGGGTCTCTTGGGTCCAACATGCAAACCTTCAAGTTGAGTTTGACACCAAAAACATTAAAACATCACCTGTGTCCGAGCCTTGGGGGGTGCAGATGGCCCGGAGTAAAGCTGAATAACCGAACTCCAGAACTAGCCTGTTGAATGAATTTTTGAAGGCTCTCTTAGAGTTTTTTGATCAAAATTGTTGGCTTTGGAAATAAATGAAGATTACAAGTGATGACTATCTGGGCTGTTTGTGCGATGTAGGAAATGTGCAGGAATTTAGTGAGCCAACGTAAGTCCGCATGCATTTCTTAAGTTCAACTAATGTTTTTGGCACATAGAACGAGAAGCGTTAGTTCGTATTTATTTCTTTCTAGGGTTGCTTATGAAAATGCTTTTCTTGCCTCTTGCAAGAATTTTAGATTTTTATTTTCTTGTCAGTTAGCTTTGTAGTAGGGAGATTTTATACAGTTTCCTGCTGCAGTTCTTTCCCCCAAGTGTAAGGGAGGGTGATTGAGTAGCAGTGCTTTCGAAAAGTTCAAGTTGGACTGAAGAAAAAGACTCGTTCATCAGTTTTGATATTGGTTGCATAGTCAATGTTCAAATGAAAGCATTTCTTTGTTTAATTGGTAAAATCATTTTCATCTAGTTGGTAGATTTAGATGCATTCAACAAATTATGTGACAACTTTGGAGGCAAGCTATGATTGGACAGTCAGGCTGCATAACACATTAACCTGATTTCTTTTATGGAGCCATAAAACTTTTATTGGACTTGTTAGGTTGTACAACTGTGTCCTTGGCTTCTAAGGTTTTAGAAACCCTCTTCTTTATTTGAAGTTTGCGTATTTTGGGGTTACATTTTGCTGATCTTCAACTCTCTAACATGTAAATAACAATGAGGGACAAGCGGGGTCAAACTATGGGGGCAGTGTTTGAAATGGTAGCATTGTAACCATCATGGGTTGGCCTAATGGTACTGGTAGAAAAGGAAATATAGTCTCAATAAATGGCTAAGAGGTTATGGGTTCAATCCATGGTGGCCACCTACCTAGGATTTAATATCCTATGAGTTTCCTTGACACCCAAATTTTGTAGAATCAGGCGGGTTGTCCCAAAAAAGAAATGGTAGCATTGTAGTTTTCTTGAAGCTTTTAATGTGAGATTAGGATTTTCCCCATTGAAGGGTTCATAAAAAATATAGGTGCATAATGATTGATATCATAGTTTTGAGTAAGGGTGAACGGTTTGGTTCGGCTCGATTTTTTGTAGAAAATCGGAACTGAATTGATCAATCGGTTAAGGAAATTTGGAACTTGAAACCGAACTGGGTTCAAGGATAAACCGCATTGCGCCGACTGCTCAGATTGATGGTTTGAGCGGGTATGTTCCCAGTTTATGGCATATAATGCGCGCATGGGGAAGATGGAATAGTTCTTTAGAAATTTCGAAAGTAAAACGAAATTTTGCCCACCACAAGTTTCAAACTCACGACCTTAAGTCCACAGCGCCACTACTCACCAATTTCACCAAGGTGATTTTTGATGCTAAATGTCAATGCCTAATATATATATATTTTTATTGGTCGGCTCGGTTTTACAATTAGTTTTTTCAGCCTAACCTGAACCCGACCACAAAATTTCGGTTTTGTATATTCTGAACCTGAAGCTGCCGACCCGAACAATGAGTGGTTTCGGTCGGTTTAGGTGGTTTTGTTAGTTTTTTTTATTTATTTATTTTTCCTTGCACCCCTAGTATTGGGGAAATAGCAAGAACTCCTGCGAAGAAAATGAATGGAACAGAACATTCTTAATGTTTTAGCTAGCTGGATGGTGTTGGGGTTGATAGTTTTCCAATAAGTTTGGGCAGTTATATATAATGCAAGATAGAAGTGGTCAGAGTCATGAGGCTCCATTTGATTACCATTTGGATTTCTTTAATTGAAAAGAAAAACAAATGGTTCTTGATAACCATTTGGTTCTTCAAAATTGTGCTTGTTATCTTACAATTTTTTTACAATGTTCCACACCTTTCTAAAGAAAATATTTGAATTCTTAGCTAAATTCAAAAATCAAAAACAAATTCTTAAAAACTATTTAAAATTTTTCTTAAATTTTATTTTAGTTTTCAACACCCAAAACCAAAAACCAAATGGTCTTCAAAGGGGCATGATGTGATCTAATTGTATTCAGCAGACAATAGAGTTTTCTACCGAAAATCTTGCTGCATTTTAATTATTTATGGATAATGCATTCTGTCTCAGTAGAGGGTTCTAAATTCGTTGAATTTTATAGTCTATGATGGTTCTGTTCCTTGTACTTTGAATAATCTTGTTTTGGCTTTTTCTTAATTAGTAAAAAAAAAATGCTTTTTCTTGTTGGAACCTGAATGAAATATCCAAATAGTACAAAATATGCCCATAAACAGGATTGCAGAATATTCCTCCAACTAAATACAAGGAAATTTAAGTTGTAATGATTGAGGGGCTGTATATCAAAAAAAGGAATTGAAAATGGATGATTCAAGAACATCCCCCAGGGATCTTTCTTTTCCTTTGAAAAGTCCTAGAATTTCTCTCCTATCATATCTTCCAAAGAATGGCTCTGATAATGCTAGCCCATAAATGCCCTTTTGTTGCCTTAAAAGGGTGATCATTGAACAACGTTATAATCCACGCAGTTGTGTCGAACGGAGCAGCAATATGCCAACCAACAGCCCAGAGCAGCATAAGAACAATGGAAGAAGATATGATTTTCAGGTTCATTATCCTTTTAGCAAAGGCAGCATCAGGAAGAAGAAATTTGATGCCAAGGGCATCTTTTTTGGAACCTATCCAGCGTTCTGAGGCAGGAGTGGACAATTTCCCAGAGAAGAACTTGACTCTCTTTGGACAAGGAAATCTCCACAATTGTTTGAAGAGATCCTTCATGGATGAAGTTGTTCCCAAGGCAACGTGTGATATTAACGATTTGACAATAAAAAAGCCATTGTTATCCAAATTCCAGTCCAAATGTCCCCCCTCAGTGTGAGAGTGGGATGAGTTGATTTAAGGAGACCCATTTGGAAATTTCATCCTCCTTAAAGTTTCTTCTAAAGTTCAGCACCCAAGATGAGTTATCAAATATTGGAATTTAAGATGCAAGTTATATGCTTGTTTTATCTCGTCTTGATGCCATTTACATGCCCTAATCATTGAAAGCTCTTGTTTCTTACAATAAATAATTGTAATTTATATTATTTCATTTTATTTTCTTGCCAAAATAAATGATACAAACTCTTTATAATGGAGACCTCATTTGATGGTACCTTGTTCATTCTCTGATTGCCTACTTTTGACTCTGTTTTTGTTTTTGTTTTATTTAACATTATTATGTAAACTTATCATTTTATGCATTGAAAATATGCCTCTAGGATTCCTTTTGGGAGGCAAGGTCCGAGCTTGCTGCTTATGAGAATTTATTATTTGGAAAAATTAGAGGTTTGTTCCTCATTTATCATTGTGATGGAAAATTGATTATTAACTTACCTTTCTTCTTTCTTTTCTTTTTTCCCCCTCAAATATTTAAATAACTGAATATTGTTGTTTTAAATTTCTTCTGCAGATGGTATTCTTGTTGCTGCATCACATCCGCTAATCAGTTGTGGAGTTGCAACTGGCATGGGTTTCTTAGTCTTTAAAAGTATGATATCATTTATTGAATGGTTTTGATTTTACAAGATCTTTTAACGGGTAGTTATAAATTCATAGATTTGTTTACTTCAAATACATTCTTTGTCTAATCATTTTTTCATATTTCATATCTCCCAATATTAATTGCTTTCCAATGACACCAAATTATTCAAGCATGTTAGAAATGATTTTGAATTTTTATCTAATTAAATCTTCGAAAAGCACGCACCTTATTGCACTTTAATAAATTCATAGTTCACCTAGATTTGGAGTGGTACATGAAACTTGTAACATTCTGAATCTTGAGCATTTATTTTTCAACAGTACTAATATTCTGTTTGATCTTGCAGAGCCCAGAAATTTCTTATACTACAAAACCGTTCGACTTTTTGTGAATGAAGAGGTGAGCAAATTTTGATTTATCATAATTAAAAAGAAAAATAAAGAAAAATAAAGAGAAAAAAAAGTTTAATAAGTGGAGCTCCAGGTAGAGGCTCTGTATTCAGATATGTACTAATCATTGAAAGCTTGTTGTCACTGGTTCCTTTTGAGCTCATCTTCCCAAATCTGCTTTCTCATAAATTAATGTTCTTGTATCTGAGGTTGTGAATTGCCAAGTCAACCTTTTCTATGGTTAAAGGCTCTATCATAGCAATTCGACGATGTACCTTCAGTAGCTTTACCTCATCCTTAATTTTTTATAAGAATTTTAGCAGTCTGTCTTGATATTTGAAAACCTGACATAAAAAATTGGGAGTTAGATAGGATAGTTTGTATGATAGTCGACCTACCTCCCTTTGAGAATATGATGTTTTTTAACATTTCTCTGATATTCTAGAGAATCCTTCCACTACAAGGTCCCGGGAAGGGAAAGGCTTGCATCCAAGGGGCATGCCAAGATAATCGAGTAGGAGGCTTCCAATTGTGGCAAAGGATTCCAGTTTTTCCTCAACTGTTTTATAGTGGTCAATAATAAAGCCTGGGAGAGTAATTTTGGGCCTTTTGGCTAACGTTGATCCTCCTACCAGGAGCTAATTTGGAGATTATGAGTATGCCAATGTTCCTGTGAAGCTCATCATCATCATAGTCATTAAAAATTCAGATGTTAGCTATGAAGGAAAATGATTGATGGGAATCGCAAAACTTTTAAATACCCTATTGCTCAGGATGTGAAACGTCTATTGAGAAACTAGGCTACTGCCTGCAGTTGTTCAATCAGAAACATTGAGGCAGAGACTACATCATAGCAACTTCATCCAATCTGACTTGGTCAAGATCACGAACGTGGGCTCAAACCTTCCAAGTATGATAATATCTGTACTGAGTTGATTCCCTAAAGCTAACAACTCTCCTTTGGTTGGAACCACATGAACATGCTTCAGATTGACTCCAAGTCATCACTCTTGGGCTGGAAGTTTTCCTTTCCATTCAACAAGTTAGACAGAAGCAGAGGAAGTTTGTGCTCAAGTGCAACCTGGACTCAAGGACACAGTTTTACAGCCTATAGAACAGATTCTGCTCAAGTAAGATCTGTTCTCAACAGAATGAAATATGTGCAACTTGATCAATAGGAAGGCCAAACGCCTGTCTGATTGATGTTAGTTCATCCAATAGGTGAAGTACCTAGATTGGCTCGCAGACACGGCAGTAGTGAAGAACAAAAAATAGAGGGTCTACAGAGACTGTGTTAAGGTTATGAACAAGGCATGCCCAAGGATTATTTTCCACTCTCATAGACACCTAAGGCTACCTCTAGATTTCATGCTTCCAGTTAACCAAGAGAATATTGCATATCATCGTGCAAATTAATAAGTAATGCTCTTTGCCCTGAAGAGTGGGAGGCAACGCAGACTACCCAACCAAATGTTCAATGACCAATTTAATTAGACGATTACTGGATTATTGTCCTAAACTCAATTTAACACGGAAATTACCCTAAACGTCTGAAAGAATTTGTGTTTCTCCCTTGAGCCCAATTCCTTTTGTAACATGATTGTTGCCAATAGGTTTCGTCCTCATCCTTTTGAATGATTGTTGGGCGGAGTTAAAGGCATTTACTATGAAAGGATATTTCTAAGGAGCTTCCTTCTTTCACTCATTTGGTATGTTGTGTGATGGGGGAGAACAAAATGTGTACTTTTGAGAAGATTAGTGAGTGGGGGATAGACCCCTCTGCTCTATGTTCCTTCATCTCTATCATCCTACTTCCTTAAAAAACCATGTGGTGTCTGGCTTTTAGTTTGATGATTTGGTCGGGGAGCTCCTTTTCTTTTCATTCAAGTTTTGTCACTCTTCATTCAATAGGGAGCCACGAGGGTTGTCTCTCTTCCATCCATGCTTGAGGTGTTTGTTTCTAGACATGGGAGAAGGGACATATGTGTGTGAAGTCCCAACCCTTTTTGGAGGGATTCTCATGCAATTCCTTTTTTTGTAGTTTGATAGAGCCTTCTCCCTTACTTGAGTGAGTCTAAGGGGTCCTGTATAATCACCACTCCCCTAATAGGAAACGTGTACATGTATATACACCCAAAAATTCACTCTTTTCACACCAGCATGTAGTTCTATACTAACTTTCGCGTCAAATTTCTTTGGTTGACATCCACTTGAAACTAACTTTTGATTCTTCTGATTTTTCAGCCACCGCATTTGCTGAAAATGACCTGTAACTCATGTGTTCAAATCTGTATCATAATTCATACGTTACCACTACCTTGCATTGCGCATATATATATATAGATTCTTTATATTCCAATTAAATTTTACTTATTTATATGACGTTATTTAGGCTCTAAAGTTTAAAATGTTAAAACTGTGAATTAGAATTGGAATGTTAAAAAATATAATTTGAAACAAGATTATCTATGTCAAATAATGTTTATTTAAATTAGTTGTTTCCCAACTAACTTAGTCTATTATTTATCTAAAGCTGACTGTTATTTTAGACATCTGCTCATGGATGCACACACATATGGGGGTTGGGAATTTCCCTTACGTAGGATAGATTTTTTATCCTAATGTATCGTGCATGGTTTTTACCAGTACATTGGCATTCTGTTTCTTAGTAAAAAATTGGTATATTAGGATAGTAAAAAATTATCCTAATGTATCGTGCATGGTTTTTTTATTATATACTTGAATTTTAATAATATTTACTAGAGCATGTTTTCTGCCTTGAAGGATGAAATATTTTCCTACAATTAGAGCTTTCTTAAAATTAGTGTCAGCTACTCCTATAGAGGAAACCCATGCCCAATTTGAACAAAACATTTTAATTGTATTCATGAAATAGTATCCATCCCCAATTCATTTCCACATACTAAATCTGCCCAAATTGTAATTCATTCTATCACTGGGCATTCCATCTCATTATACCATTCTAAATTTAATTAATTTATCCTGTTATTCCAACTTTTACAAAATTTATTCTTTCTTTACTGGATTATCATATGGAAAGTCTCATCTTTGTATTGGTTTTGCAGTCCTTATTTTCCAAAGCTGATGCTAAAGTTAAAGAGTTGCGACAATCAATTGATCGGATAAAGGTTGAAAGTGAGAGGCTGGAGGTAGGATTATATATTTCTCTTAAATCCTCAATTCATCATCGCTGATTGAAGAATTAGTAAAATTGTCACATGAATATCTTTGTGTTTATTAAATTGAAAAGAAAAATAATTCTTTTTGGGGAAATGCCACTTTTACAATGTATAAGATATCGATACAAGGTTTGATAGAACTTATTATAAAGTCTTTGCGTAGAAGAAAAAAGTTCAAAAGAGTCATAAAAGAAAACAATGAAAAGCAAACCTTTTGGACTTGTATGAAACTTTGAAGCTAATGGAGAAACTTGACGGCTTGTATAGTACTTTGGTATGGAGGAACAAGAGTGAAGATTCAAGAGAAAAGAAATAAAAGCTTTGTTGTTTTAGTAGAGTCATGGGAAGCTAGGTTGCTTGGCAGAGACGATTACGATGAATGTTAGAATACCATCAACATTGGAAATTCTTTAGTAACATAAACATTGCAGAAGGATCAGTTGGTGTGACGACTAGCAAGCCAAGGAGACTTGTATTTGGTTATCTACATCCCTATCATCTGATGTAAGGGAGATTGGCCCTTGGGTTTTCAGGAGAAGTTATGGAAATTGTGCCAGAGTTCATCCACATTAGCTTGTGAGGCTTCGTAAAAGATACAATTTTCAATGAGAGAGGAGTTCATGGAAGTATGCTAAAAGGTTGTTGGATGGTTGATGGTGATGAATGAGAATGGAGAACTATTTTTAGAGGGGAAGGAGGGGACACTGCCTTTTAGTATAGTGGAGGGAGACTCACCTTAAGGAAAACATTAAATTTTTTAGGAAAAACAATCAGACTCACCTTAATTCATTCAGTTTTGAGTGGGATTGCCATCTACTTCTCTCTTTTTACAGCTCATGTTCGGTGTGTAACAGCCTGAAGAAACTTATGAGAGATTTACTATGAGGAGGTATGGAGGAGGCAAAACAGCTCACTTGATGAATTGGGAAACTATTGGCAAACGAACCCCTGGGAGGGTTGGAGCTAGGGAGTTTAAGGGCTCATAATAATACCTTATTGGAAAAATGGTTATGGTGTTTTCCCCACGAGTCGTCTTCCCTGTAGTCTAGGATTATTACAAGCATGGTCCTCATCCTTTTGATTGGATTTTGGGTAGGATGAAAGGCACATTCAGAAATCCATGGAAAGAGATTTCTTCGAATCTCTCCTCTTTCTTTGAGTTGATTCGTTATGTGGTGGGAGATGGGTTTGGGACTTACATCTAGGAGAATAGGTGGTTGGGAGATCGCCCCCGTTGTAATAGGTTTCCTCATCATCTTTCTGCTAAGAAAAATTGTTTTGTTGCGGATGTTCTGTTGCTTTCAGGGAGCTCACTCTCTTTCTTGTTTGGTTTTCGTCGTCATTCATTCAATAGAAAAATGAATGACGGAGGTTATGACCCCCCTTTCTTTATTAGGGATGTTGAGGTTAGGTAAGGAAGAAAGGAAACTCGTTGTTGGAGTGTTATCCCTTCCAAGGGTTTCTCTTATAAATCTCTCTTTCAATGTTTACTAGATCCTTCTCCCTTCAGAGAGTTGGCTTTCTCTGTTCTTTGGAAGGTGAAAATTTAAAGAAGGTGAAGTTCCTTTTTTTGGCAGGTTATTCATGGATACCTTGGACAGGCTTTCGGAGAAGATGTCGTCCTTGGTTGTGGGCCTTTCTGCTGTACTCTTTGTTGGAGGGTGGAGGAAGATCTGAATTACTTATTTTGGAATTGTACTTATGTGCTATCGGTTTGGAACATCTTCTTTAGGCTGTTTGACTATTAGATATAGCCTATCACAAAGATTTTAGTATTTTATGATCAAGTTCTTCCTCCAGCCACTGTTTGAAGGGAGAGGGGGTATTTTATGGAAGGGTGGGGTATGTGCTATTGTGGGGCATTTGGGGTGAGATAAATAATAGTATCTTACTATCTTTTGTGGGGTTGAGAGGGAACTTTTCGATGTTTGGTCCCTGGAAAATTTTAATGTTTCTAAGAGTCTGACAGTACTTTTCGTAACTATTTGCTAGGTCATATCTTGTTAGGATGGAGACTCCTCTTTTACGGTGCTCCCTTTTGTGGTTATTTATTTATATATATACTTTTAAGCCCTTGTATTCTTTCATTTTTTCTCAATGAAAGTTGATCTTTTATTAAAAAAAGAAAAGTCAGTGGAATGGTAAAGGATGTCTGTATGAACTCAGATGTGCTTCCATCATGATTACTTCTCATTATTGGAAGCATACCGAAGTTAATTATTGAGGATTCCATTCATTATTAATCCATTGAAGACTAGTTACAATCACCATGTTCACAAAAGGGCTCATCTGCAAGAATGGGGACTCACGCTACAGCAAGAAGAATTCTATACCTCCGTGGAAATATCTTGTTGGGGACAACCATTTGCTCCCAGTTAGCTCTGTCTTTTTGCTTTTGATACTGATCTGACTGTATGGATGTATAAATGAGGTAAGTTGACTTTGCTGACATGGCATATACCTGAGCAAGGATGTGGTAACATGACTTGATGTATCGTATGAAAGAAGCTCACATGGAAAGAGTATCATTATGGATTGTAGGGTTAAAACAGAAAGCATCCAGAAAGGAATTATATTTCTCTTTTGTACAATTTGCAGCTGAATTTGTCAGTTTTTCCATGTTTTGAATTGTTTGTACTCTAGGAATGAAAAATTACTTGCTTTTCTATAATTTTCATTTCAGAAAAGAACACTTCAAGCTCAAGAGGAATTGATACGAGGGAGAACAAAACTCAGGTTCGCTCTAGAAAGTTGCTAATGAGCTGTTAGAAATAATTACCGTATTGGTACCCCTTCTCATTTCATATTCTTTTGCAGGCAAGCAGGAAAACAGATTGAAGGTGTGATTCAGTCGGCTTATAAAATTGAAAGAAAGGCAAGAGGTATACAAAGGGGTTCTCTAGACATGTTAAATTGAAGGATGGTTAGAACAGTGCACAGAATTTTTGCTACAATCTCATTTCACACTATTGTTTGTGTACCATGTCATCAGGTTTAAAAGATATTCTTGCAGATCTTCCCACAAGGGAAGCTTCACGACTTAGGACTCAGGTACATTCCATTTGACTGTTCACTTCTTTGATAGTGTTGCATCCTCGTTGAAGACTGTTGAGTGAGGTCTTTGAATTCTCTTTTTCAAAGTATTGATTGAATTGAGAATGTTTAGCATTTGGTTGGAAGAAACTCCAGAGTATGCAGCCTACGAACTTTTAATTCTTCCTCGCAGTTTTATATTTTTTATAGTCATCAATCCCCCATCCTTTTTATGATAATTCTCATTTGTGATGTATTGAAAACCCAGCGTGTGAGTGTGCTCATAGATGAAATAAATTCAATTTTTACTCTACATAAATCAATTGTAATCTTAAATTTTTAATTTCATCCATTTTAAACCTTATACTAGGATATGCGACCCTTCTCCCTCTCCCAGGTTCTAAGTATTTTCATGATTGGGGCTGGGCATTTATTTGGCATGATTTTGGTTGTTTTGTCAATTAAATTTTCTATGCTTTATTGGTTGGTTCATGAGTGATATTAATTTTAAGACTTGTTCAAGTTCAAGGTTTAAATCCATGGAATTGAAGGTTAAAACTGACTAAAAAATATGGTATACACAAACCTTTCCCTTTATATTTCAATATACCCTAATCTTGGACTCTGCATTGCAGGTTTCTAACCTTGCTTCTGAGGCAAAGAAGGAAAGAATTGGCTTGAGCAAGGAGGTCTCGAAAATAAGCGACTATGGCATCTCTGTCTGATAAATTCAAATCCAACATTTGGCTCAACCTCAAGAATATTACTCCATCTCAAAATTCACTTGGTTTTGTCTGAAACCACTACCTGCATATCCTCTCTCATCCTTGTTTTTCCTTTCATTTTCTATTGGAGAAGGATGAGTTCTTTTTTCTTCTTTTTATAGTGCTCGGCCAAAATAAGTTTTGAAGGCTATCTATGAAAGGTGAAATTGATTGTTCAGTATAATAATCGTAGATGCAATACCAGTAGAGTTGGTTCTTTTGATAGAATCATTATCCTAACAAACTCTTCTTCTACTTGTATATTTATTTCCAATGGTCATGGGAGTGGATGGCAAAATTAAGCATAACAAATTTTACTTGGTTAAGATTCAAAATTACAATGTGAAAGGTGGAAATAAATTAGGATACCAATTCAAAATCATCTCTTGTACTAAGAATTG

mRNA sequence

AAGAAAGAAAAGAAAAAGCCCTCAACGCCAGCAGGAGCATCGAGCAGAACCCGGGGCGGGGCTCAGTGAAACCAAGTTTTTAGAATCGAGCATACATATATAATCCACCGAGGAAGAAACTCTGTTGCAATGGCGATGGATGCTGGATCATCGCCCTCCCAAGAAAATCAATCATTTTCTTCCCATCTCCATGAATCTTCTCCAGGAAAACCTCAATCATTGGAAGACTTAGCTAAGCCTTGGGCTGAGTACGCAGCTCAACAGGCCCTGCTATACCAGCGGGCTATCGACCAATCCTTGGAGTCTGCCATTCAAGCCTCCAAATCTCGCCTTTCTCAGATTCGTTCCGCCTCCTATCCTCATTTCCAGAAGGCCATTGATTCCTTTTGGGAGGCAAGGTCCGAGCTTGCTGCTTATGAGAATTTATTATTTGGAAAAATTAGAGATGGTATTCTTGTTGCTGCATCACATCCGCTAATCAGTTGTGGAGTTGCAACTGGCATGGGTTTCTTAGTCTTTAAAAAGCCCAGAAATTTCTTATACTACAAAACCGTTCGACTTTTTGTGAATGAAGAGATTGACTCCAAGTCATCACTCTTGGGCTGGAAGTTTTCCTTTCCATTCAACAAGTTAGACAGAAGCAGAGGAAGTTTGTGCTCAAGTGCAACCTGGACTCAAGGACACAGTTTTACAGCCTATAGAACAGATTCTGCTCAATCCTTATTTTCCAAAGCTGATGCTAAAGTTAAAGAGTTGCGACAATCAATTGATCGGATAAAGGTTGAAAGTGAGAGGCTGGAGAAAAGAACACTTCAAGCTCAAGAGGAATTGATACGAGGGAGAACAAAACTCAGGCAAGCAGGAAAACAGATTGAAGGTGTGATTCAGTCGGCTTATAAAATTGAAAGAAAGGCAAGAGGTTTAAAAGATATTCTTGCAGATCTTCCCACAAGGGAAGCTTCACGACTTAGGACTCAGGTTTCTAACCTTGCTTCTGAGGCAAAGAAGGAAAGAATTGGCTTGAGCAAGGAGGTCTCGAAAATAAGCGACTATGGCATCTCTGTCTGATAAATTCAAATCCAACATTTGGCTCAACCTCAAGAATATTACTCCATCTCAAAATTCACTTGGTTTTGTCTGAAACCACTACCTGCATATCCTCTCTCATCCTTGTTTTTCCTTTCATTTTCTATTGGAGAAGGATGAGTTCTTTTTTCTTCTTTTTATAGTGCTCGGCCAAAATAAGTTTTGAAGGCTATCTATGAAAGGTGAAATTGATTGTTCAGTATAATAATCGTAGATGCAATACCAGTAGAGTTGGTTCTTTTGATAGAATCATTATCCTAACAAACTCTTCTTCTACTTGTATATTTATTTCCAATGGTCATGGGAGTGGATGGCAAAATTAAGCATAACAAATTTTACTTGGTTAAGATTCAAAATTACAATGTGAAAGGTGGAAATAAATTAGGATACCAATTCAAAATCATCTCTTGTACTAAGAATTG

Coding sequence (CDS)

ATGGCGATGGATGCTGGATCATCGCCCTCCCAAGAAAATCAATCATTTTCTTCCCATCTCCATGAATCTTCTCCAGGAAAACCTCAATCATTGGAAGACTTAGCTAAGCCTTGGGCTGAGTACGCAGCTCAACAGGCCCTGCTATACCAGCGGGCTATCGACCAATCCTTGGAGTCTGCCATTCAAGCCTCCAAATCTCGCCTTTCTCAGATTCGTTCCGCCTCCTATCCTCATTTCCAGAAGGCCATTGATTCCTTTTGGGAGGCAAGGTCCGAGCTTGCTGCTTATGAGAATTTATTATTTGGAAAAATTAGAGATGGTATTCTTGTTGCTGCATCACATCCGCTAATCAGTTGTGGAGTTGCAACTGGCATGGGTTTCTTAGTCTTTAAAAAGCCCAGAAATTTCTTATACTACAAAACCGTTCGACTTTTTGTGAATGAAGAGATTGACTCCAAGTCATCACTCTTGGGCTGGAAGTTTTCCTTTCCATTCAACAAGTTAGACAGAAGCAGAGGAAGTTTGTGCTCAAGTGCAACCTGGACTCAAGGACACAGTTTTACAGCCTATAGAACAGATTCTGCTCAATCCTTATTTTCCAAAGCTGATGCTAAAGTTAAAGAGTTGCGACAATCAATTGATCGGATAAAGGTTGAAAGTGAGAGGCTGGAGAAAAGAACACTTCAAGCTCAAGAGGAATTGATACGAGGGAGAACAAAACTCAGGCAAGCAGGAAAACAGATTGAAGGTGTGATTCAGTCGGCTTATAAAATTGAAAGAAAGGCAAGAGGTTTAAAAGATATTCTTGCAGATCTTCCCACAAGGGAAGCTTCACGACTTAGGACTCAGGTTTCTAACCTTGCTTCTGAGGCAAAGAAGGAAAGAATTGGCTTGAGCAAGGAGGTCTCGAAAATAAGCGACTATGGCATCTCTGTCTGA

Protein sequence

MAMDAGSSPSQENQSFSSHLHESSPGKPQSLEDLAKPWAEYAAQQALLYQRAIDQSLESAIQASKSRLSQIRSASYPHFQKAIDSFWEARSELAAYENLLFGKIRDGILVAASHPLISCGVATGMGFLVFKKPRNFLYYKTVRLFVNEEIDSKSSLLGWKFSFPFNKLDRSRGSLCSSATWTQGHSFTAYRTDSAQSLFSKADAKVKELRQSIDRIKVESERLEKRTLQAQEELIRGRTKLRQAGKQIEGVIQSAYKIERKARGLKDILADLPTREASRLRTQVSNLASEAKKERIGLSKEVSKISDYGISV
Homology
[Close]
BLAST of CaUC06G109550 vs. NCBI nr
Match: XP_008459726.1 (PREDICTED: uncharacterized protein LOC103498769 [Cucumis melo])

HSP 1 Score: 431.4 bits (1108), Expect = 6.6e-117
Identity = 246/312 (78.85%), Postives = 255/312 (81.73%), Query Frame = 0 

Query: 1   MAMDAGSSPSQENQSFSSHLHESSPGKPQSLEDLAKPWAEYAAQQALLYQRAIDQSLESA 60
           MAMDAGSS SQENQS  S+ HESS  KPQSLEDLAKPWAEYAAQQALLYQRAID SLESA
Sbjct: 1   MAMDAGSSSSQENQSSPSYHHESSSSKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA 60

Query: 61  IQASKSRLSQIRSASYPHFQKAIDSFWEARSELAAYENLLFGKIRDGILVAASHPLISCG 120
           I+ASKSRLSQIRS SYPHFQKAIDSFWEA+SELAAYENL+FGKIRDGILVAASHPLISCG
Sbjct: 61  IEASKSRLSQIRSTSYPHFQKAIDSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCG 120

Query: 121 VATGMGFLVFKKPRNFLYYKTVRLFVNEEIDSKSSLLGWKFSFPFNKLDRSRGSLCSSAT 180
           VATGMGFLVFKKPR+FLYYKTVRLF+NEE                               
Sbjct: 121 VATGMGFLVFKKPRSFLYYKTVRLFMNEE------------------------------- 180

Query: 181 WTQGHSFTAYRTDSAQSLFSKADAKVKELRQSIDRIKVESERLEKRTLQAQEELIRGRTK 240
                           SL SKADAKVKELRQSIDRIKVESERLEKRTLQA+EELIRGRTK
Sbjct: 181 ----------------SLLSKADAKVKELRQSIDRIKVESERLEKRTLQAEEELIRGRTK 240

Query: 241 LRQAGKQIEGVIQSAYKIERKARGLKDILADLPTREASRLRTQVSNLASEAKKERIGLSK 300
           LRQAGKQIEGVIQSA+KIERKARGLKDILADLPTREASR RTQVSNLASEAKKERIGLSK
Sbjct: 241 LRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNLASEAKKERIGLSK 265

Query: 301 EVSKISDYGISV 313
           EVSKIS+YGISV
Sbjct: 301 EVSKISNYGISV 265

[Close]
BLAST of CaUC06G109550 vs. NCBI nr
Match: TYK24760.1 (uncharacterized protein E5676_scaffold266G003230 [Cucumis melo var. makuwa])

HSP 1 Score: 427.9 bits (1099), Expect = 7.3e-116
Identity = 244/310 (78.71%), Postives = 253/310 (81.61%), Query Frame = 0 

Query: 3   MDAGSSPSQENQSFSSHLHESSPGKPQSLEDLAKPWAEYAAQQALLYQRAIDQSLESAIQ 62
           MDAGSS SQENQS  S+ HESS  KPQSLEDLAKPWAEYAAQQALLYQRAID SLESAI+
Sbjct: 1   MDAGSSSSQENQSSPSYHHESSSSKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESAIE 60

Query: 63  ASKSRLSQIRSASYPHFQKAIDSFWEARSELAAYENLLFGKIRDGILVAASHPLISCGVA 122
           ASKSRLSQIRS SYPHFQKAIDSFWEA+SELAAYENL+FGKIRDGILVAASHPLISCGVA
Sbjct: 61  ASKSRLSQIRSTSYPHFQKAIDSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCGVA 120

Query: 123 TGMGFLVFKKPRNFLYYKTVRLFVNEEIDSKSSLLGWKFSFPFNKLDRSRGSLCSSATWT 182
           TGMGFLVFKKPR+FLYYKTVRLF+NEE                                 
Sbjct: 121 TGMGFLVFKKPRSFLYYKTVRLFMNEE--------------------------------- 180

Query: 183 QGHSFTAYRTDSAQSLFSKADAKVKELRQSIDRIKVESERLEKRTLQAQEELIRGRTKLR 242
                         SL SKADAKVKELRQSIDRIKVESERLEKRTLQA+EELIRGRTKLR
Sbjct: 181 --------------SLLSKADAKVKELRQSIDRIKVESERLEKRTLQAEEELIRGRTKLR 240

Query: 243 QAGKQIEGVIQSAYKIERKARGLKDILADLPTREASRLRTQVSNLASEAKKERIGLSKEV 302
           QAGKQIEGVIQSA+KIERKARGLKDILADLPTREASR RTQVSNLASEAKKERIGLSKEV
Sbjct: 241 QAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNLASEAKKERIGLSKEV 263

Query: 303 SKISDYGISV 313
           SKIS+YGISV
Sbjct: 301 SKISNYGISV 263

[Close]
BLAST of CaUC06G109550 vs. NCBI nr
Match: XP_011656867.1 (RGS1-HXK1-interacting protein 1 isoform X1 [Cucumis sativus] >KGN46566.2 hypothetical protein Csa_005221 [Cucumis sativus])

HSP 1 Score: 427.6 bits (1098), Expect = 9.5e-116
Identity = 242/312 (77.56%), Postives = 254/312 (81.41%), Query Frame = 0 

Query: 1   MAMDAGSSPSQENQSFSSHLHESSPGKPQSLEDLAKPWAEYAAQQALLYQRAIDQSLESA 60
           MAMDAGSS SQENQS  S+ H+SS  KPQSLEDLAKPWAEYAAQQALLYQRAID SLESA
Sbjct: 1   MAMDAGSSSSQENQSSPSYHHQSSSPKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA 60

Query: 61  IQASKSRLSQIRSASYPHFQKAIDSFWEARSELAAYENLLFGKIRDGILVAASHPLISCG 120
           I+ SKSRLSQIRS S+PHFQKA+DSFWEA+SELAAYENL+FGKIRDGILVAASHPLISCG
Sbjct: 61  IEVSKSRLSQIRSTSFPHFQKAVDSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCG 120

Query: 121 VATGMGFLVFKKPRNFLYYKTVRLFVNEEIDSKSSLLGWKFSFPFNKLDRSRGSLCSSAT 180
           VATGMGFLVFKKPRNFLYYKT+RLFVNEE                               
Sbjct: 121 VATGMGFLVFKKPRNFLYYKTIRLFVNEE------------------------------- 180

Query: 181 WTQGHSFTAYRTDSAQSLFSKADAKVKELRQSIDRIKVESERLEKRTLQAQEELIRGRTK 240
                           SL SKADAKVKELRQSIDRIKVESERLEKRTLQA++ELIRGRTK
Sbjct: 181 ----------------SLLSKADAKVKELRQSIDRIKVESERLEKRTLQAEDELIRGRTK 240

Query: 241 LRQAGKQIEGVIQSAYKIERKARGLKDILADLPTREASRLRTQVSNLASEAKKERIGLSK 300
           LRQAGKQIEGVIQSA+KIERKARGLKDILADLPTREASR RTQVSNLASEAKKERIGLSK
Sbjct: 241 LRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNLASEAKKERIGLSK 265

Query: 301 EVSKISDYGISV 313
           EVSKIS+YGISV
Sbjct: 301 EVSKISNYGISV 265

[Close]
BLAST of CaUC06G109550 vs. NCBI nr
Match: XP_011656868.1 (RGS1-HXK1-interacting protein 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 419.5 bits (1077), Expect = 2.6e-113
Identity = 241/312 (77.24%), Postives = 252/312 (80.77%), Query Frame = 0 

Query: 1   MAMDAGSSPSQENQSFSSHLHESSPGKPQSLEDLAKPWAEYAAQQALLYQRAIDQSLESA 60
           MAMDAGSS SQENQS  S+ H+SS  KPQSLEDLAKPWAEYAAQQALLYQRAID SLESA
Sbjct: 1   MAMDAGSSSSQENQSSPSYHHQSSSPKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA 60

Query: 61  IQASKSRLSQIRSASYPHFQKAIDSFWEARSELAAYENLLFGKIRDGILVAASHPLISCG 120
           I+ SKSRLSQIRS S+PHFQK  DSFWEA+SELAAYENL+FGKIRDGILVAASHPLISCG
Sbjct: 61  IEVSKSRLSQIRSTSFPHFQK--DSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCG 120

Query: 121 VATGMGFLVFKKPRNFLYYKTVRLFVNEEIDSKSSLLGWKFSFPFNKLDRSRGSLCSSAT 180
           VATGMGFLVFKKPRNFLYYKT+RLFVNEE                               
Sbjct: 121 VATGMGFLVFKKPRNFLYYKTIRLFVNEE------------------------------- 180

Query: 181 WTQGHSFTAYRTDSAQSLFSKADAKVKELRQSIDRIKVESERLEKRTLQAQEELIRGRTK 240
                           SL SKADAKVKELRQSIDRIKVESERLEKRTLQA++ELIRGRTK
Sbjct: 181 ----------------SLLSKADAKVKELRQSIDRIKVESERLEKRTLQAEDELIRGRTK 240

Query: 241 LRQAGKQIEGVIQSAYKIERKARGLKDILADLPTREASRLRTQVSNLASEAKKERIGLSK 300
           LRQAGKQIEGVIQSA+KIERKARGLKDILADLPTREASR RTQVSNLASEAKKERIGLSK
Sbjct: 241 LRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNLASEAKKERIGLSK 263

Query: 301 EVSKISDYGISV 313
           EVSKIS+YGISV
Sbjct: 301 EVSKISNYGISV 263

[Close]
BLAST of CaUC06G109550 vs. NCBI nr
Match: XP_038875078.1 (LOW QUALITY PROTEIN: RGS1-HXK1-interacting protein 1 [Benincasa hispida])

HSP 1 Score: 418.3 bits (1074), Expect = 5.8e-113
Identity = 240/312 (76.92%), Postives = 249/312 (79.81%), Query Frame = 0 

Query: 1   MAMDAGSSPSQENQSFSSHLHESSPGKPQSLEDLAKPWAEYAAQQALLYQRAIDQSLESA 60
           +AMDAGS  SQENQS  S+ HESSPGKPQSLEDLAK  AEYAAQQALLY RAID  L+SA
Sbjct: 24  LAMDAGSPSSQENQSSPSYHHESSPGKPQSLEDLAKRLAEYAAQQALLYXRAIDHXLKSA 83

Query: 61  IQASKSRLSQIRSASYPHFQKAIDSFWEARSELAAYENLLFGKIRDGILVAASHPLISCG 120
           I+ASKSRLSQIRS SYPHFQKAID FWE +SELAAYEN+LFGKIRDGILVAASHPLISCG
Sbjct: 84  IEASKSRLSQIRSTSYPHFQKAIDFFWEGKSELAAYENVLFGKIRDGILVAASHPLISCG 143

Query: 121 VATGMGFLVFKKPRNFLYYKTVRLFVNEEIDSKSSLLGWKFSFPFNKLDRSRGSLCSSAT 180
           VATGMGFLVFKKPRNFLYY+T+RLFVNEE                               
Sbjct: 144 VATGMGFLVFKKPRNFLYYRTIRLFVNEE------------------------------- 203

Query: 181 WTQGHSFTAYRTDSAQSLFSKADAKVKELRQSIDRIKVESERLEKRTLQAQEELIRGRTK 240
                           SL SKADA VKELRQSIDRIKVESERLEKRTLQAQEELIRGRTK
Sbjct: 204 ----------------SLLSKADANVKELRQSIDRIKVESERLEKRTLQAQEELIRGRTK 263

Query: 241 LRQAGKQIEGVIQSAYKIERKARGLKDILADLPTREASRLRTQVSNLASEAKKERIGLSK 300
           LRQAGKQIEGVIQSAYKIERKARGLKDILADLPTREASR RTQVSNLASEAKKERIGLSK
Sbjct: 264 LRQAGKQIEGVIQSAYKIERKARGLKDILADLPTREASRFRTQVSNLASEAKKERIGLSK 288

Query: 301 EVSKISDYGISV 313
           EVSKIS+YGISV
Sbjct: 324 EVSKISNYGISV 288

[Close]
BLAST of CaUC06G109550 vs. ExPASy Swiss-Prot
Match: Q84K90 (RGS1-HXK1-interacting protein 1 OS=Arabidopsis thaliana OX=3702 GN=RHIP1 PE=1 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 3.5e-20
Identity = 78/306 (25.49%), Postives = 146/306 (47.71%), Query Frame = 0 

Query: 7   SSPSQENQSFSSHLHESSPGKPQSLEDLAKPWAEYAAQQALLYQRAIDQSLESAIQASKS 66
           S+P+ E ++ S  +  ++ G  +S+E   +   ++        QR + +S ++A+++++S
Sbjct: 13  SAPAIETETVSDAMEHTAIGVVESVEGAIEGAEKWVGD----LQRTVKESKDTAMRSARS 72

Query: 67  RLSQIRSASYPHFQKAIDSFWEARSELAAYENLLFGKIRDGILVAASHPLISCGVATGMG 126
               +R  S   F+   D    A ++   YEN  F K+ D ++ A  HP  + G+     
Sbjct: 73  ----LRENSTSQFRSIQDFIPHALTQYKTYENAFFSKVTDELIYAKEHPAAAIGIGVAAS 132

Query: 127 FLVFKKPRNFLYYKTVRLFVNEEIDSKSSLLGWKFSFPFNKLDRSRGSLCSSATWTQGHS 186
            ++ + PR FL+  T+  F +EE                                     
Sbjct: 133 LVLMRGPRRFLFRNTLGRFQSEE------------------------------------- 192

Query: 187 FTAYRTDSAQSLFSKADAKVKELRQSIDRIKVESERLEKRTLQAQEELIRGRTKLRQAGK 246
                     + F KA+  V+EL  S+D +K ES +L +RT  A++++ RG ++L  +G 
Sbjct: 193 ----------AQFLKAEKHVQELNMSVDLMKKESRKLLERTALAEKDMKRGLSELMNSGN 252

Query: 247 QIEGVIQSAYKIERKARGLKDILADLPTREASRLRTQVSNLASEAKKERIGLSKEVSKIS 306
            I  + +S +K E +A  L D L  +P R+A +LR +V+++ S  +++RI L+K +  +S
Sbjct: 253 DIHRLAKSVHKAECEAADLMDGLRQIPGRDAIKLRAEVASMTSLLRQKRIALNKRIMGMS 263

Query: 307 DYGISV 313
           D G+SV
Sbjct: 313 DLGVSV 263

[Close]
BLAST of CaUC06G109550 vs. ExPASy TrEMBL
Match: A0A1S3CAD0 (uncharacterized protein LOC103498769 OS=Cucumis melo OX=3656 GN=LOC103498769 PE=4 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 3.2e-117
Identity = 246/312 (78.85%), Postives = 255/312 (81.73%), Query Frame = 0 

Query: 1   MAMDAGSSPSQENQSFSSHLHESSPGKPQSLEDLAKPWAEYAAQQALLYQRAIDQSLESA 60
           MAMDAGSS SQENQS  S+ HESS  KPQSLEDLAKPWAEYAAQQALLYQRAID SLESA
Sbjct: 1   MAMDAGSSSSQENQSSPSYHHESSSSKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA 60

Query: 61  IQASKSRLSQIRSASYPHFQKAIDSFWEARSELAAYENLLFGKIRDGILVAASHPLISCG 120
           I+ASKSRLSQIRS SYPHFQKAIDSFWEA+SELAAYENL+FGKIRDGILVAASHPLISCG
Sbjct: 61  IEASKSRLSQIRSTSYPHFQKAIDSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCG 120

Query: 121 VATGMGFLVFKKPRNFLYYKTVRLFVNEEIDSKSSLLGWKFSFPFNKLDRSRGSLCSSAT 180
           VATGMGFLVFKKPR+FLYYKTVRLF+NEE                               
Sbjct: 121 VATGMGFLVFKKPRSFLYYKTVRLFMNEE------------------------------- 180

Query: 181 WTQGHSFTAYRTDSAQSLFSKADAKVKELRQSIDRIKVESERLEKRTLQAQEELIRGRTK 240
                           SL SKADAKVKELRQSIDRIKVESERLEKRTLQA+EELIRGRTK
Sbjct: 181 ----------------SLLSKADAKVKELRQSIDRIKVESERLEKRTLQAEEELIRGRTK 240

Query: 241 LRQAGKQIEGVIQSAYKIERKARGLKDILADLPTREASRLRTQVSNLASEAKKERIGLSK 300
           LRQAGKQIEGVIQSA+KIERKARGLKDILADLPTREASR RTQVSNLASEAKKERIGLSK
Sbjct: 241 LRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNLASEAKKERIGLSK 265

Query: 301 EVSKISDYGISV 313
           EVSKIS+YGISV
Sbjct: 301 EVSKISNYGISV 265

[Close]
BLAST of CaUC06G109550 vs. ExPASy TrEMBL
Match: A0A5D3DNB0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003230 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 3.5e-116
Identity = 244/310 (78.71%), Postives = 253/310 (81.61%), Query Frame = 0 

Query: 3   MDAGSSPSQENQSFSSHLHESSPGKPQSLEDLAKPWAEYAAQQALLYQRAIDQSLESAIQ 62
           MDAGSS SQENQS  S+ HESS  KPQSLEDLAKPWAEYAAQQALLYQRAID SLESAI+
Sbjct: 1   MDAGSSSSQENQSSPSYHHESSSSKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESAIE 60

Query: 63  ASKSRLSQIRSASYPHFQKAIDSFWEARSELAAYENLLFGKIRDGILVAASHPLISCGVA 122
           ASKSRLSQIRS SYPHFQKAIDSFWEA+SELAAYENL+FGKIRDGILVAASHPLISCGVA
Sbjct: 61  ASKSRLSQIRSTSYPHFQKAIDSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCGVA 120

Query: 123 TGMGFLVFKKPRNFLYYKTVRLFVNEEIDSKSSLLGWKFSFPFNKLDRSRGSLCSSATWT 182
           TGMGFLVFKKPR+FLYYKTVRLF+NEE                                 
Sbjct: 121 TGMGFLVFKKPRSFLYYKTVRLFMNEE--------------------------------- 180

Query: 183 QGHSFTAYRTDSAQSLFSKADAKVKELRQSIDRIKVESERLEKRTLQAQEELIRGRTKLR 242
                         SL SKADAKVKELRQSIDRIKVESERLEKRTLQA+EELIRGRTKLR
Sbjct: 181 --------------SLLSKADAKVKELRQSIDRIKVESERLEKRTLQAEEELIRGRTKLR 240

Query: 243 QAGKQIEGVIQSAYKIERKARGLKDILADLPTREASRLRTQVSNLASEAKKERIGLSKEV 302
           QAGKQIEGVIQSA+KIERKARGLKDILADLPTREASR RTQVSNLASEAKKERIGLSKEV
Sbjct: 241 QAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNLASEAKKERIGLSKEV 263

Query: 303 SKISDYGISV 313
           SKIS+YGISV
Sbjct: 301 SKISNYGISV 263

[Close]
BLAST of CaUC06G109550 vs. ExPASy TrEMBL
Match: A0A6J1L5I2 (uncharacterized protein LOC111499304 OS=Cucurbita maxima OX=3661 GN=LOC111499304 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 4.2e-109
Identity = 232/312 (74.36%), Postives = 247/312 (79.17%), Query Frame = 0 

Query: 1   MAMDAGSSPSQENQSFSSHLHESSPGKPQSLEDLAKPWAEYAAQQALLYQRAIDQSLESA 60
           MAMDAGSS S EN S  S+ HESSPGKPQ+LEDLAK W  YAAQQA+LYQ AI+ SLESA
Sbjct: 1   MAMDAGSSSSLENPSSLSNHHESSPGKPQALEDLAKSWVGYAAQQAMLYQLAINHSLESA 60

Query: 61  IQASKSRLSQIRSASYPHFQKAIDSFWEARSELAAYENLLFGKIRDGILVAASHPLISCG 120
           ++ASKSRLSQIRS SYPHFQKAIDSF + +SE+A +ENLLFGK+RDGILVAASHPLISCG
Sbjct: 61  VEASKSRLSQIRSTSYPHFQKAIDSFQDVKSEVADFENLLFGKVRDGILVAASHPLISCG 120

Query: 121 VATGMGFLVFKKPRNFLYYKTVRLFVNEEIDSKSSLLGWKFSFPFNKLDRSRGSLCSSAT 180
           VATGMG LVFKKPRNFLYYKTVRLFVNEE                               
Sbjct: 121 VATGMGLLVFKKPRNFLYYKTVRLFVNEE------------------------------- 180

Query: 181 WTQGHSFTAYRTDSAQSLFSKADAKVKELRQSIDRIKVESERLEKRTLQAQEELIRGRTK 240
                           +L SKADA+VKELRQSIDRIKVESERLEKRTLQAQEELIRGRTK
Sbjct: 181 ----------------ALLSKADARVKELRQSIDRIKVESERLEKRTLQAQEELIRGRTK 240

Query: 241 LRQAGKQIEGVIQSAYKIERKARGLKDILADLPTREASRLRTQVSNLASEAKKERIGLSK 300
           LRQAGKQIEGVIQSA+KIERKARGLKDILADLPTREASR RTQVSNLASEAKKERIGLSK
Sbjct: 241 LRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNLASEAKKERIGLSK 265

Query: 301 EVSKISDYGISV 313
           EVSKIS+YGISV
Sbjct: 301 EVSKISNYGISV 265

[Close]
BLAST of CaUC06G109550 vs. ExPASy TrEMBL
Match: A0A6J1H5U3 (uncharacterized protein LOC111460300 OS=Cucurbita moschata OX=3662 GN=LOC111460300 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 1.2e-108
Identity = 232/312 (74.36%), Postives = 247/312 (79.17%), Query Frame = 0 

Query: 1   MAMDAGSSPSQENQSFSSHLHESSPGKPQSLEDLAKPWAEYAAQQALLYQRAIDQSLESA 60
           MAMDAGSS S ENQS  S+ HESS GKPQ+LEDLAK WA YAAQQA+LYQ AI+ SLESA
Sbjct: 1   MAMDAGSSSSLENQSSLSNHHESSLGKPQALEDLAKSWAGYAAQQAMLYQLAINHSLESA 60

Query: 61  IQASKSRLSQIRSASYPHFQKAIDSFWEARSELAAYENLLFGKIRDGILVAASHPLISCG 120
           ++ASKSRLSQIRS SYPHFQKAIDSF + +SE+A +ENL FGK+RDGILVAASHPLISCG
Sbjct: 61  VEASKSRLSQIRSTSYPHFQKAIDSFQDVKSEVADFENLFFGKVRDGILVAASHPLISCG 120

Query: 121 VATGMGFLVFKKPRNFLYYKTVRLFVNEEIDSKSSLLGWKFSFPFNKLDRSRGSLCSSAT 180
           VATGMG LVFKKPRNFLYYKTVRLFVNEE                               
Sbjct: 121 VATGMGLLVFKKPRNFLYYKTVRLFVNEE------------------------------- 180

Query: 181 WTQGHSFTAYRTDSAQSLFSKADAKVKELRQSIDRIKVESERLEKRTLQAQEELIRGRTK 240
                           +L SKADA+VKELRQSIDRIKVESERLEKRTLQAQEELIRGRTK
Sbjct: 181 ----------------ALLSKADARVKELRQSIDRIKVESERLEKRTLQAQEELIRGRTK 240

Query: 241 LRQAGKQIEGVIQSAYKIERKARGLKDILADLPTREASRLRTQVSNLASEAKKERIGLSK 300
           LRQAGKQIEGVIQSA+KIERKARGLKDILADLPTREASR RTQVSNLASEAKKERIGLSK
Sbjct: 241 LRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNLASEAKKERIGLSK 265

Query: 301 EVSKISDYGISV 313
           EVSKIS+YGISV
Sbjct: 301 EVSKISNYGISV 265

[Close]
BLAST of CaUC06G109550 vs. ExPASy TrEMBL
Match: A0A6J1DXH1 (uncharacterized protein LOC111024998 OS=Momordica charantia OX=3673 GN=LOC111024998 PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 1.8e-104
Identity = 225/312 (72.12%), Postives = 242/312 (77.56%), Query Frame = 0 

Query: 1   MAMDAGSSPSQENQSFSSHLHESSPGKPQSLEDLAKPWAEYAAQQALLYQRAIDQSLESA 60
           MA D+GSS S+E  S SS L+ESS GKPQSL  LAKPWA+YAA QALLYQR ID SLESA
Sbjct: 1   MATDSGSSSSEEELSSSSPLNESSSGKPQSLASLAKPWADYAAHQALLYQRTIDDSLESA 60

Query: 61  IQASKSRLSQIRSASYPHFQKAIDSFWEARSELAAYENLLFGKIRDGILVAASHPLISCG 120
           IQASKSRLSQIRS S+PH QK IDSF +A+SELAAYENLLFGKIRDGILVAASHPLISCG
Sbjct: 61  IQASKSRLSQIRSTSHPHLQKTIDSFQDAKSELAAYENLLFGKIRDGILVAASHPLISCG 120

Query: 121 VATGMGFLVFKKPRNFLYYKTVRLFVNEEIDSKSSLLGWKFSFPFNKLDRSRGSLCSSAT 180
           VATG+GFLV KKPRNFLY+KT+RLF+NEE                               
Sbjct: 121 VATGLGFLVLKKPRNFLYHKTIRLFMNEE------------------------------- 180

Query: 181 WTQGHSFTAYRTDSAQSLFSKADAKVKELRQSIDRIKVESERLEKRTLQAQEELIRGRTK 240
                           SL SKADA+VKELRQSIDRIKVESERLEKRTLQA+ EL+RGRTK
Sbjct: 181 ----------------SLLSKADAQVKELRQSIDRIKVESERLEKRTLQAEGELLRGRTK 240

Query: 241 LRQAGKQIEGVIQSAYKIERKARGLKDILADLPTREASRLRTQVSNLASEAKKERIGLSK 300
           LRQAGKQIEGVIQSA+ IERKARGLKDILADLPTREAS+ RTQVSNLASEAKKERI L K
Sbjct: 241 LRQAGKQIEGVIQSAHTIERKARGLKDILADLPTREASQFRTQVSNLASEAKKERIALGK 265

Query: 301 EVSKISDYGISV 313
           EVSKIS+YGISV
Sbjct: 301 EVSKISNYGISV 265

[Close]
BLAST of CaUC06G109550 vs. TAIR 10
Match: AT2G45060.1 (Uncharacterised conserved protein UCP022280 )

HSP 1 Score: 241.1 bits (614), Expect = 1.2e-63
Identity = 150/319 (47.02%), Postives = 193/319 (60.50%), Query Frame = 0 

Query: 1   MAMDAGSSPSQENQSFSSHLHESSPGKPQSLEDL-------AKPWAEYAAQQALLYQRAI 60
           MA    SS S+ + + S  + +SSP  P   + +       A  W + A +QAL+YQ+ I
Sbjct: 1   MAALGESSSSEMDNAKSPEIQQSSPVHPPEYQKIATTTVENAASWIDDALRQALVYQKTI 60

Query: 61  DQSLESAIQASKSRLSQIRSASYPHFQKAIDSFWEARSELAAYENLLFGKIRDGILVAAS 120
            ++++S I ASK+RLSQIR  S  H  + IDS  +  SE   YE ++FGKI+DG+ VAAS
Sbjct: 61  TETVDSTIDASKARLSQIRDTSVAHTSQTIDSLRDIASEYNVYEQMVFGKIKDGVNVAAS 120

Query: 121 HPLISCGVATGMGFLVFKKPRNFLYYKTVRLFVNEEIDSKSSLLGWKFSFPFNKLDRSRG 180
           HPLIS  +A G+G    KK R F+YY TVR+FV+EE                        
Sbjct: 121 HPLISGTLAFGVGIFALKKTRRFVYYNTVRMFVSEE------------------------ 180

Query: 181 SLCSSATWTQGHSFTAYRTDSAQSLFSKADAKVKELRQSIDRIKVESERLEKRTLQAQEE 240
                                  +L S+AD KVKELRQS+DR+K ESE+LE+    A+EE
Sbjct: 181 -----------------------ALLSRADLKVKELRQSMDRLKAESEKLERVATVAEEE 240

Query: 241 LIRGRTKLRQAGKQIEGVIQSAYKIERKARGLKDILADLPTREASRLRTQVSNLASEAKK 300
            IRGR KLRQAGKQI G I SAYKIE++A GLKD+L +LPTREASR RTQ+S  ASE K+
Sbjct: 241 FIRGRMKLRQAGKQIRGAISSAYKIEKQAAGLKDVLKELPTREASRFRTQISKRASEVKQ 272

Query: 301 ERIGLSKEVSKISDYGISV 313
           ER  L+KEV+KIS+YGISV
Sbjct: 301 ERNALTKEVNKISNYGISV 272

[Close]
BLAST of CaUC06G109550 vs. TAIR 10
Match: AT4G26410.1 (Uncharacterised conserved protein UCP022280 )

HSP 1 Score: 100.5 bits (249), Expect = 2.5e-21
Identity = 78/306 (25.49%), Postives = 146/306 (47.71%), Query Frame = 0 

Query: 7   SSPSQENQSFSSHLHESSPGKPQSLEDLAKPWAEYAAQQALLYQRAIDQSLESAIQASKS 66
           S+P+ E ++ S  +  ++ G  +S+E   +   ++        QR + +S ++A+++++S
Sbjct: 13  SAPAIETETVSDAMEHTAIGVVESVEGAIEGAEKWVGD----LQRTVKESKDTAMRSARS 72

Query: 67  RLSQIRSASYPHFQKAIDSFWEARSELAAYENLLFGKIRDGILVAASHPLISCGVATGMG 126
               +R  S   F+   D    A ++   YEN  F K+ D ++ A  HP  + G+     
Sbjct: 73  ----LRENSTSQFRSIQDFIPHALTQYKTYENAFFSKVTDELIYAKEHPAAAIGIGVAAS 132

Query: 127 FLVFKKPRNFLYYKTVRLFVNEEIDSKSSLLGWKFSFPFNKLDRSRGSLCSSATWTQGHS 186
            ++ + PR FL+  T+  F +EE                                     
Sbjct: 133 LVLMRGPRRFLFRNTLGRFQSEE------------------------------------- 192

Query: 187 FTAYRTDSAQSLFSKADAKVKELRQSIDRIKVESERLEKRTLQAQEELIRGRTKLRQAGK 246
                     + F KA+  V+EL  S+D +K ES +L +RT  A++++ RG ++L  +G 
Sbjct: 193 ----------AQFLKAEKHVQELNMSVDLMKKESRKLLERTALAEKDMKRGLSELMNSGN 252

Query: 247 QIEGVIQSAYKIERKARGLKDILADLPTREASRLRTQVSNLASEAKKERIGLSKEVSKIS 306
            I  + +S +K E +A  L D L  +P R+A +LR +V+++ S  +++RI L+K +  +S
Sbjct: 253 DIHRLAKSVHKAECEAADLMDGLRQIPGRDAIKLRAEVASMTSLLRQKRIALNKRIMGMS 263

Query: 307 DYGISV 313
           D G+SV
Sbjct: 313 DLGVSV 263

The following BLAST results are available for this feature:
BLAST of CaUC06G109550 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008459726.16.6e-11778.85PREDICTED: uncharacterized protein LOC103498769 [Cucumis melo][more]
TYK24760.17.3e-11678.71uncharacterized protein E5676_scaffold266G003230 [Cucumis melo var. makuwa][more]
XP_011656867.19.5e-11677.56RGS1-HXK1-interacting protein 1 isoform X1 [Cucumis sativus] >KGN46566.2 hypothe... [more]
XP_011656868.12.6e-11377.24RGS1-HXK1-interacting protein 1 isoform X2 [Cucumis sativus][more]
XP_038875078.15.8e-11376.92LOW QUALITY PROTEIN: RGS1-HXK1-interacting protein 1 [Benincasa hispida][more]
BLAST of CaUC06G109550 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q84K903.5e-2025.49RGS1-HXK1-interacting protein 1 OS=Arabidopsis thaliana OX=3702 GN=RHIP1 PE=1 SV... [more]
BLAST of CaUC06G109550 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CAD03.2e-11778.85uncharacterized protein LOC103498769 OS=Cucumis melo OX=3656 GN=LOC103498769 PE=... [more]
A0A5D3DNB03.5e-11678.71Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1L5I24.2e-10974.36uncharacterized protein LOC111499304 OS=Cucurbita maxima OX=3661 GN=LOC111499304... [more]
A0A6J1H5U31.2e-10874.36uncharacterized protein LOC111460300 OS=Cucurbita moschata OX=3662 GN=LOC1114603... [more]
A0A6J1DXH11.8e-10472.12uncharacterized protein LOC111024998 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
BLAST of CaUC06G109550 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G45060.11.2e-6347.02Uncharacterised conserved protein UCP022280 [more]
AT4G26410.12.5e-2125.49Uncharacterised conserved protein UCP022280 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 199..233
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availablePANTHERPTHR34554:SF1ALANINE-TRNA LIGASEcoord: 194..312
NoneNo IPR availablePANTHERPTHR34554RGS1-HXK1-INTERACTING PROTEIN 1coord: 194..312
NoneNo IPR availablePANTHERPTHR34554:SF1ALANINE-TRNA LIGASEcoord: 6..149
NoneNo IPR availablePANTHERPTHR34554RGS1-HXK1-INTERACTING PROTEIN 1coord: 6..149

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC06G109550.1CaUC06G109550.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane