CaUC05G106230 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC05G106230
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	RNA-binding protein 1-like
Location	Ciama_Chr05: 36562309 .. 36563565 (-)
RNA-Seq Expression	CaUC05G106230
Synteny	CaUC05G106230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCATTAGCCCAACCCAAAAAGGCACTTATTATCTGCTTAAATACCGATTATTTGACCTATGTATCCAGCGTTGGACATGGCAACTGTCTACCTTGTGTTTTTGCTGAAAATCTCCTGATCTCTGTAATGTCGAAGCTGTAAAAAGTAAGTTCTACAATCTAACTTCTATACTTCTCTTTAATTTCTTCTGGTCGTTTCAACCATTGTAATCGTTTTGTCCAATCCCCTCCCTAGGGTTTTGCCTGCATTTCCATTTAGGGTTTTAGGGCTAATTCTCTATTGGATGAATTTCACTTTGAGCCGCTTTTATACCCATTTTTTTTGGTTCTTTATTGGTGATGGAAGGTAATTATAGAAACCCCAGTTGATAAAGTGTTGGCTTTTACTGGAAACTAATTTTTAGAATATTGCTCTTTTATTTTTCTTTTATGATTGATTTGTAATGTTTTCGTCCAGAATTGTAGGTTAAAGTGACTTACTCTACTGGTTAAAACCTGTGGAGCAAGCAACGGAACAAAGGATGAATATGAGTACTATTAGGATGGAAAATAACAATGATCAGTGTAGGGGCAGAAAGATTTTTGTTGGGGGCTTATCGGCTGAATTGACTGAGGATGAGTTTAAAACTTACTTTGAAAAGTTCGGTCAGATAACCGATGTAGTTGTGATGCATGATAGTGTAACCAACCGCCCTAGAGGATTTGGATTCATCACATTTGATTCTGTAGAATCTGTTGACTCTGTTCTGCAGAATAACTTTCATGAGCTGAATGGTAGGCGTGTGGAGGTGAAGAGAGCTATCCCAAAAAAGGGAAACTACAATGCTGGTCATATTCCCAATGCTAGAACACTGGGAGGAAAAAGCCCTCTTCCTAATAGGGATGTTCCTTTCCCTTACCCATATTATGGTACTGGTTATACAATTTATCCTGGTTTTACACCTTTTCCGCATTTTGGAGGACCAGGAGTTGATTTGTATGGTTCAAACTTCTATGGGAATTGGTTTCCCCCTAGCTTTGGTAACATGGCTTCCGACGGCGCATGGTACAGTCCAAATTTTTTTGGTGTTGGGATGTTTCCTCCACCTTACAGAAATTCTCTAATTTCTCCATCATTCTCAAGCAAGGGGCTCTCAGATACAGGGACTGGAAATGGAATGGCAACAAGAAACGGGGAGATAAAGCAGAAAACTTCTGGAAAACGAAGTATGTCAGCGGATGCAGTGCCATTTCAGATCAAAGACAAAACTTGA

mRNA sequence

ATGGCAACGGAACAAAGGATGAATATGAGTACTATTAGGATGGAAAATAACAATGATCAGTGTAGGGGCAGAAAGATTTTTGTTGGGGGCTTATCGGCTGAATTGACTGAGGATGAGTTTAAAACTTACTTTGAAAAGTTCGGTCAGATAACCGATGTAGTTGTGATGCATGATAGTGTAACCAACCGCCCTAGAGGATTTGGATTCATCACATTTGATTCTGTAGAATCTGTTGACTCTGTTCTGCAGAATAACTTTCATGAGCTGAATGGTAGGCGTGTGGAGGTGAAGAGAGCTATCCCAAAAAAGGGAAACTACAATGCTGGTCATATTCCCAATGCTAGAACACTGGGAGGAAAAAGCCCTCTTCCTAATAGGGATGTTCCTTTCCCTTACCCATATTATGGTACTGGTTATACAATTTATCCTGGTTTTACACCTTTTCCGCATTTTGGAGGACCAGGAGTTGATTTGTATGGTTCAAACTTCTATGGGAATTGGTTTCCCCCTAGCTTTGGTAACATGGCTTCCGACGGCGCATGGTACAGTCCAAATTTTTTTGGTGTTGGGATGTTTCCTCCACCTTACAGAAATTCTCTAATTTCTCCATCATTCTCAAGCAAGGGGCTCTCAGATACAGGGACTGGAAATGGAATGGCAACAAGAAACGGGGAGATAAAGCAGAAAACTTCTGGAAAACGAAGTATGTCAGCGGATGCAGTGCCATTTCAGATCAAAGACAAAACTTGA

Coding sequence (CDS)

ATGGCAACGGAACAAAGGATGAATATGAGTACTATTAGGATGGAAAATAACAATGATCAGTGTAGGGGCAGAAAGATTTTTGTTGGGGGCTTATCGGCTGAATTGACTGAGGATGAGTTTAAAACTTACTTTGAAAAGTTCGGTCAGATAACCGATGTAGTTGTGATGCATGATAGTGTAACCAACCGCCCTAGAGGATTTGGATTCATCACATTTGATTCTGTAGAATCTGTTGACTCTGTTCTGCAGAATAACTTTCATGAGCTGAATGGTAGGCGTGTGGAGGTGAAGAGAGCTATCCCAAAAAAGGGAAACTACAATGCTGGTCATATTCCCAATGCTAGAACACTGGGAGGAAAAAGCCCTCTTCCTAATAGGGATGTTCCTTTCCCTTACCCATATTATGGTACTGGTTATACAATTTATCCTGGTTTTACACCTTTTCCGCATTTTGGAGGACCAGGAGTTGATTTGTATGGTTCAAACTTCTATGGGAATTGGTTTCCCCCTAGCTTTGGTAACATGGCTTCCGACGGCGCATGGTACAGTCCAAATTTTTTTGGTGTTGGGATGTTTCCTCCACCTTACAGAAATTCTCTAATTTCTCCATCATTCTCAAGCAAGGGGCTCTCAGATACAGGGACTGGAAATGGAATGGCAACAAGAAACGGGGAGATAAAGCAGAAAACTTCTGGAAAACGAAGTATGTCAGCGGATGCAGTGCCATTTCAGATCAAAGACAAAACTTGA

Protein sequence

MATEQRMNMSTIRMENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNAGHIPNARTLGGKSPLPNRDVPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGNMASDGAWYSPNFFGVGMFPPPYRNSLISPSFSSKGLSDTGTGNGMATRNGEIKQKTSGKRSMSADAVPFQIKDKT

Homology

[Close]

BLAST of CaUC05G106230 vs. NCBI nr
Match: XP_038898856.1 (RNA-binding protein 1-like [Benincasa hispida])

HSP 1 Score: 442.6 bits (1137), Expect = 2.3e-120
Identity = 214/247 (86.64%), Postives = 227/247 (91.90%), Query Frame = 0


Query: 7   MNMSTIRMENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRG 66
           M MST RMENNNDQCRGRKIFVGGLSAELTEDEFK YFEKFG+ITDVVVMHDSVTNRPRG
Sbjct: 1   MIMSTTRMENNNDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRG 60

Query: 67  FGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNAGHIPNARTLGGKSPLP-- 126
           FGFITF+SVESVDSVLQ+NFHELNGRRVEVKRAIPKKGNYN GHIPNART GGKSPLP  
Sbjct: 61  FGFITFESVESVDSVLQSNFHELNGRRVEVKRAIPKKGNYNGGHIPNARTQGGKSPLPNS 120

Query: 127 NRDVPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGNMASDGAWYSP 186
           NR+VPFPYPYYG+ Y +YPGFTPFPH+GGPGVDLYGS+ YGNWFPPSFGNMAS+G WY P
Sbjct: 121 NRNVPFPYPYYGSSYPVYPGFTPFPHYGGPGVDLYGSHLYGNWFPPSFGNMASEGTWYGP 180

Query: 187 NFFGVGMFPPPYRNSLISPSFSSKGLSDTGTGNGM--ATRNGEIKQKTSGKRSMSADAVP 246
           NFFGVG+FPPPYRNSLI P +SSKGLSDTGTGNGM    RNGEIKQ T+GKR MSADAVP
Sbjct: 181 NFFGVGIFPPPYRNSLIPPIYSSKGLSDTGTGNGMVDTRRNGEIKQNTTGKRIMSADAVP 240

Query: 247 FQIKDKT 250
           FQIKD+T
Sbjct: 241 FQIKDRT 247

[Close]

BLAST of CaUC05G106230 vs. NCBI nr
Match: KAE8649895.1 (hypothetical protein Csa_012205 [Cucumis sativus])

HSP 1 Score: 369.0 bits (946), Expect = 3.2e-98
Identity = 190/247 (76.92%), Postives = 208/247 (84.21%), Query Frame = 0


Query: 6   RMNMSTIRMENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPR 65
           R+NMST RM+NNNDQCRGRKIFVGGLSAELTE+EF++YFE FGQITDVVVMHDSVTNRPR
Sbjct: 50  RLNMSTTRMDNNNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPR 109

Query: 66  GFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNAGHIPNARTLGGKSPL-- 125
           GFGF+TF+S+ESVDSVLQ NFHELNGRRVEVKRAIPKKGNYN  HIPNAR    KSPL  
Sbjct: 110 GFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNGVHIPNAR--AAKSPLLN 169

Query: 126 PNRDVPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGNMASDGAWYS 185
            NR+VPFPYPYYG+GY IYPGFT FPH+G   VD YGSNFYGNWFPP   N+ASDG W+ 
Sbjct: 170 GNRNVPFPYPYYGSGYPIYPGFTHFPHYGA-AVDSYGSNFYGNWFPPGSANIASDGWWHG 229

Query: 186 PNFFGVGMFPPPYRNSLISPSFSSKGLSDTGTGNGMA-TRNGEIKQKTSGKRSMSADAVP 245
           PNFF VGM PP  RNSL+ P   SKG+   G+ NGMA TRNGEIKQ T+GKR MSADA P
Sbjct: 230 PNFFSVGMLPPLCRNSLMHP---SKGIY-IGSRNGMANTRNGEIKQNTAGKRIMSADAAP 289

Query: 246 FQIKDKT 250
           FQIKD+T
Sbjct: 290 FQIKDRT 289

[Close]

BLAST of CaUC05G106230 vs. NCBI nr
Match: XP_004141412.1 (RNA-binding protein 1 [Cucumis sativus])

HSP 1 Score: 364.8 bits (935), Expect = 6.0e-97
Identity = 188/244 (77.05%), Postives = 205/244 (84.02%), Query Frame = 0


Query: 9   MSTIRMENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFG 68
           MST RM+NNNDQCRGRKIFVGGLSAELTE+EF++YFE FGQITDVVVMHDSVTNRPRGFG
Sbjct: 1   MSTTRMDNNNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFG 60

Query: 69  FITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNAGHIPNARTLGGKSPL--PNR 128
           F+TF+S+ESVDSVLQ NFHELNGRRVEVKRAIPKKGNYN  HIPNAR    KSPL   NR
Sbjct: 61  FVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNGVHIPNAR--AAKSPLLNGNR 120

Query: 129 DVPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGNMASDGAWYSPNF 188
           +VPFPYPYYG+GY IYPGFT FPH+G   VD YGSNFYGNWFPP   N+ASDG W+ PNF
Sbjct: 121 NVPFPYPYYGSGYPIYPGFTHFPHYGA-AVDSYGSNFYGNWFPPGSANIASDGWWHGPNF 180

Query: 189 FGVGMFPPPYRNSLISPSFSSKGLSDTGTGNGMA-TRNGEIKQKTSGKRSMSADAVPFQI 248
           F VGM PP  RNSL+ P   SKG+   G+ NGMA TRNGEIKQ T+GKR MSADA PFQI
Sbjct: 181 FSVGMLPPLCRNSLMHP---SKGIY-IGSRNGMANTRNGEIKQNTAGKRIMSADAAPFQI 237

Query: 249 KDKT 250
           KD+T
Sbjct: 241 KDRT 237

[Close]

BLAST of CaUC05G106230 vs. NCBI nr
Match: KAG7037746.1 (RNA-binding protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 314.7 bits (805), Expect = 7.2e-82
Identity = 167/248 (67.34%), Postives = 190/248 (76.61%), Query Frame = 0


Query: 1   MATEQRMNMSTIRMENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSV 60
           +A EQRM+  T RME   DQ RGRKIFVGGLSAELTED+FK+YFEKFG++TDVVVM DSV
Sbjct: 14  LAREQRMSNGT-RME---DQFRGRKIFVGGLSAELTEDDFKSYFEKFGRVTDVVVMRDSV 73

Query: 61  TNRPRGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNAGHIPNARTLGGK 120
           T RPRGFGFITFDSV+SVDSVLQNNFHELNGRRVEVKRAIPKKGNYN GHI        K
Sbjct: 74  TKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHI-------SK 133

Query: 121 SPLPNRDVPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGNMASDGA 180
           SPL   +V   YPYY  GYT+YPGFTPFP + GPG  LYGS+ YGNWF PSFG MAS  A
Sbjct: 134 SPLSESNVLPSYPYYSCGYTVYPGFTPFPPY-GPGFGLYGSDPYGNWFSPSFGPMASPAA 193

Query: 181 WYSPNFFGVGMFPPPYRNSLISPSFSSKGLSDTGTGNGMATRNGEIKQKTSGKRSMSADA 240
           WY+PNFF  GMFPPP+++SL+ P++SS GLS    G   A    ++   T  +++MSADA
Sbjct: 194 WYAPNFF--GMFPPPHKDSLVYPTYSSNGLSTPVAGYETADARRKVDPPTRAQKNMSADA 247

Query: 241 VPFQIKDK 249
           VPF  KDK
Sbjct: 254 VPFHAKDK 247

[Close]

BLAST of CaUC05G106230 vs. NCBI nr
Match: XP_022940975.1 (RNA-binding protein 1-like [Cucurbita moschata])

HSP 1 Score: 310.5 bits (794), Expect = 1.4e-80
Identity = 159/230 (69.13%), Postives = 178/230 (77.39%), Query Frame = 0


Query: 19  DQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESV 78
           DQ RGRKIFVGGLSAELTED+FK YFEKFG++TDVVVM DSVT RPRGFGFITFDSV+SV
Sbjct: 9   DQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSV 68

Query: 79  DSVLQNNFHELNGRRVEVKRAIPKKGNYNAGHIPNARTLGGKSPLPNRDVPFPYPYYGTG 138
           DSVLQNNFHELNGRRVEVKRAIPKKGNYN GHI        KSPL   +V   YPYY  G
Sbjct: 69  DSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHI-------SKSPLSESNVLPSYPYYSCG 128

Query: 139 YTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGNMASDGAWYSPNFFGVGMFPPPYRN 198
           YT+YPGFTPFP + GPG  LYGS+ YGNWF PSFG MAS  AWY+PNFF  GMFPPP++N
Sbjct: 129 YTVYPGFTPFPPY-GPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFF--GMFPPPHKN 188

Query: 199 SLISPSFSSKGLSDTGTGNGMATRNGEIKQKTSGKRSMSADAVPFQIKDK 249
           SL+ P++SS GLS    G   A    ++   T  +++MSADAVPF  KDK
Sbjct: 189 SLVYPTYSSNGLSTPVAGYETADARRKVDPPTRAQKNMSADAVPFHAKDK 228

[Close]

BLAST of CaUC05G106230 vs. ExPASy Swiss-Prot
Match: Q9C652 (RNA-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBP1 PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.1e-31
Identity = 91/207 (43.96%), Postives = 117/207 (56.52%), Query Frame = 0


Query: 5   QRMNMSTIRMENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRP 64
           Q+MN     M +N    R +KIFVGGLS+  TE+EFK+YFE+FG+ TDVVVMHD VTNRP
Sbjct: 101 QQMNGGLREMSSNGVTSRTKKIFVGGLSSNTTEEEFKSYFERFGRTTDVVVMHDGVTNRP 160

Query: 65  RGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKG----NYNAGHIPNARTLGGK 124
           RGFGF+T+DS +SV+ V+Q+NFHEL+ +RVEVKRAIPK+G    N NA +IP        
Sbjct: 161 RGFGFVTYDSEDSVEVVMQSNFHELSDKRVEVKRAIPKEGIQSNNGNAVNIP-------- 220

Query: 125 SPLPNRDVPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFP--PSFGNMASD 184
            P  +     PY     GY +   F P P FG      Y  N     +P    F    ++
Sbjct: 221 -PSYSSFQATPYVPEQNGYGMVLQFPP-PVFG------YHHNVQAVQYPYGYQFTAQVAN 280

Query: 185 GAWYSPNFFGVGMF-------PPPYRN 199
            +W +P     G +       PPP  N
Sbjct: 281 VSWNNPIMQPTGFYCAPPHPTPPPTNN 291

[Close]

BLAST of CaUC05G106230 vs. ExPASy Swiss-Prot
Match: Q8W034 (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.4e-27
Identity = 76/180 (42.22%), Postives = 104/180 (57.78%), Query Frame = 0


Query: 8   NMSTIRMENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGF 67
           N++T R    +   + +KIFVGGL   LT++EF+ YFE +G +TDV +M+D  TNRPRGF
Sbjct: 94  NLNTSRSSGGDAYNKTKKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGF 153

Query: 68  GFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNAGHIPNARTLGGKSPLPNRD 127
           GF++FDS ++VDSVL   FH+L+G++VEVKRA+PK  N   G     R++GG        
Sbjct: 154 GFVSFDSEDAVDSVLHKTFHDLSGKQVEVKRALPKDANPGGG----GRSMGGGG------ 213

Query: 128 VPFPYPYYGTGYTIYPGFTPFPHF-----GGPGVDLYGSNFYGNWFPPSFGNMASDGAWY 183
               Y  YG   + Y G      F      G G+  YGS+ YG      +GN  S+GA Y
Sbjct: 214 -SGGYQGYGGNESSYDGRMDSNRFLQHQSVGNGLPSYGSSGYG----AGYGN-GSNGAGY 257

[Close]

BLAST of CaUC05G106230 vs. ExPASy Swiss-Prot
Match: Q9VVE5 (RNA-binding protein Musashi homolog Rbp6 OS=Drosophila melanogaster OX=7227 GN=Rbp6 PE=2 SV=3)

HSP 1 Score: 100.5 bits (249), Expect = 2.8e-20
Identity = 60/139 (43.17%), Postives = 78/139 (56.12%), Query Frame = 0


Query: 22  RGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSV 81
           R +KIFVGGLSA  T ++ K+YFE+FG I D ++M D  TNR RGFGF+TF S + VD V
Sbjct: 116 RTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKV 175

Query: 82  LQNNFHELNGRRVEVKRAIPKK--------GNYNAGHIPNARTLGGKSPLPNRDVPFPYP 141
            + +FHE+N + VE K+A PK+            AG       + G   LP       Y 
Sbjct: 176 CEIHFHEINNKMVECKKAQPKEVMLPANLAKTRAAGRSAYDNIMWGLGTLPEGFPAAAYA 235

Query: 142 YY--GTGYTIYPGF-TPFP 150
            Y  G GY+ YP F  P+P
Sbjct: 236 AYAAGRGYSGYPSFGLPYP 254

[Close]

BLAST of CaUC05G106230 vs. ExPASy Swiss-Prot
Match: Q9JII5 (DAZ-associated protein 1 OS=Mus musculus OX=10090 GN=Dazap1 PE=1 SV=2)

HSP 1 Score: 96.7 bits (239), Expect = 4.0e-19
Identity = 60/185 (32.43%), Postives = 90/185 (48.65%), Query Frame = 0


Query: 18  NDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVES 77
           +D  +  KIFVGG+     E E + YF+KFG +T+VV+++D+   RPRGFGFITF+  +S
Sbjct: 107 SDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQS 166

Query: 78  VDSVLQNNFHELNGRRVEVKRAIPKKGNYNAGHIPNARTLGGKSPLPNRDVPFPYPYYGT 137
           VD  +  +FH++ G++VEVKRA P+     A   P A   G +            P    
Sbjct: 167 VDQAVNMHFHDIMGKKVEVKRAEPRDSKNQAPGQPGASQWGSRVA----------PSAAN 226

Query: 138 GYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGNMASDGAWYSPNFFGVGMFPPPYR 197
           G+   P  T    +G  G+ +      G + PP  G              G    PPP+ 
Sbjct: 227 GWAGQPPPTWQQGYGPQGMWVPAGQAIGGYGPPPAGR-------------GAPPPPPPFT 268

Query: 198 NSLIS 203
           + ++S
Sbjct: 287 SYIVS 268

[Close]

BLAST of CaUC05G106230 vs. ExPASy Swiss-Prot
Match: Q96EP5 (DAZ-associated protein 1 OS=Homo sapiens OX=9606 GN=DAZAP1 PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 6.9e-19
Identity = 60/185 (32.43%), Postives = 90/185 (48.65%), Query Frame = 0


Query: 18  NDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVES 77
           +D  +  KIFVGG+     E E + YF+KFG +T+VV+++D+   RPRGFGFITF+  +S
Sbjct: 107 SDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQS 166

Query: 78  VDSVLQNNFHELNGRRVEVKRAIPKKGNYNAGHIPNARTLGGKSPLPNRDVPFPYPYYGT 137
           VD  +  +FH++ G++VEVKRA P+     A   P A   G +            P    
Sbjct: 167 VDQAVNMHFHDIMGKKVEVKRAEPRDSKSQAPGQPGASQWGSR----------VVPNAAN 226

Query: 138 GYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGNMASDGAWYSPNFFGVGMFPPPYR 197
           G+   P  T    +G  G+ +      G + PP  G              G    PPP+ 
Sbjct: 227 GWAGQPPPTWQQGYGPQGMWVPAGQAIGGYGPPPAGR-------------GAPPPPPPFT 268

Query: 198 NSLIS 203
           + ++S
Sbjct: 287 SYIVS 268

[Close]

BLAST of CaUC05G106230 vs. ExPASy TrEMBL
Match: A0A0A0L563 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G644730 PE=4 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 2.9e-97
Identity = 188/244 (77.05%), Postives = 205/244 (84.02%), Query Frame = 0


Query: 9   MSTIRMENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFG 68
           MST RM+NNNDQCRGRKIFVGGLSAELTE+EF++YFE FGQITDVVVMHDSVTNRPRGFG
Sbjct: 1   MSTTRMDNNNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFG 60

Query: 69  FITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNAGHIPNARTLGGKSPL--PNR 128
           F+TF+S+ESVDSVLQ NFHELNGRRVEVKRAIPKKGNYN  HIPNAR    KSPL   NR
Sbjct: 61  FVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNGVHIPNAR--AAKSPLLNGNR 120

Query: 129 DVPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGNMASDGAWYSPNF 188
           +VPFPYPYYG+GY IYPGFT FPH+G   VD YGSNFYGNWFPP   N+ASDG W+ PNF
Sbjct: 121 NVPFPYPYYGSGYPIYPGFTHFPHYGA-AVDSYGSNFYGNWFPPGSANIASDGWWHGPNF 180

Query: 189 FGVGMFPPPYRNSLISPSFSSKGLSDTGTGNGMA-TRNGEIKQKTSGKRSMSADAVPFQI 248
           F VGM PP  RNSL+ P   SKG+   G+ NGMA TRNGEIKQ T+GKR MSADA PFQI
Sbjct: 181 FSVGMLPPLCRNSLMHP---SKGIY-IGSRNGMANTRNGEIKQNTAGKRIMSADAAPFQI 237

Query: 249 KDKT 250
           KD+T
Sbjct: 241 KDRT 237

[Close]

BLAST of CaUC05G106230 vs. ExPASy TrEMBL
Match: A0A6J1FS87 (RNA-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111446397 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 6.5e-81
Identity = 159/230 (69.13%), Postives = 178/230 (77.39%), Query Frame = 0


Query: 19  DQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESV 78
           DQ RGRKIFVGGLSAELTED+FK YFEKFG++TDVVVM DSVT RPRGFGFITFDSV+SV
Sbjct: 9   DQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSV 68

Query: 79  DSVLQNNFHELNGRRVEVKRAIPKKGNYNAGHIPNARTLGGKSPLPNRDVPFPYPYYGTG 138
           DSVLQNNFHELNGRRVEVKRAIPKKGNYN GHI        KSPL   +V   YPYY  G
Sbjct: 69  DSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHI-------SKSPLSESNVLPSYPYYSCG 128

Query: 139 YTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGNMASDGAWYSPNFFGVGMFPPPYRN 198
           YT+YPGFTPFP + GPG  LYGS+ YGNWF PSFG MAS  AWY+PNFF  GMFPPP++N
Sbjct: 129 YTVYPGFTPFPPY-GPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFF--GMFPPPHKN 188

Query: 199 SLISPSFSSKGLSDTGTGNGMATRNGEIKQKTSGKRSMSADAVPFQIKDK 249
           SL+ P++SS GLS    G   A    ++   T  +++MSADAVPF  KDK
Sbjct: 189 SLVYPTYSSNGLSTPVAGYETADARRKVDPPTRAQKNMSADAVPFHAKDK 228

[Close]

BLAST of CaUC05G106230 vs. ExPASy TrEMBL
Match: A0A6J1J2K5 (RNA-binding protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481242 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 1.1e-80
Identity = 161/236 (68.22%), Postives = 181/236 (76.69%), Query Frame = 0


Query: 13  RMENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITF 72
           RME   DQ RGRKIFVGGLSAELTED+FK YFEKFG++TDVVVM DSVT RPRGFGFITF
Sbjct: 6   RME---DQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITF 65

Query: 73  DSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNAGHIPNARTLGGKSPLPNRDVPFPY 132
           DSV+SVDSVLQNNFHELNGRRVEVKRAIPKKGNYN GHI        KSPL   +V   Y
Sbjct: 66  DSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHI-------SKSPLSESNVLPSY 125

Query: 133 PYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGNMASDGAWYSPNFFGVGMF 192
           PYY  GYT+YPGFTPFP + GPG  LYGS+ YGNWF PSFG MAS  AWY PNFF  GMF
Sbjct: 126 PYYSCGYTVYPGFTPFPPY-GPGFGLYGSDPYGNWFSPSFGPMASPAAWYGPNFF--GMF 185

Query: 193 PPPYRNSLISPSFSSKGLSDTGTGNGMATRNGEIKQKTSGKRSMSADAVPFQIKDK 249
           PPP++NSL+ P++SS GLS    G   A    +++  T  +++MSADAVPF  KD+
Sbjct: 186 PPPHKNSLVYPTYSSNGLSTPVAGYETADARRKVEPPTRAQKNMSADAVPFHAKDR 228

[Close]

BLAST of CaUC05G106230 vs. ExPASy TrEMBL
Match: A0A6J1C724 (RNA-binding protein 1-like OS=Momordica charantia OX=3673 GN=LOC111008498 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.9e-64
Identity = 145/251 (57.77%), Postives = 175/251 (69.72%), Query Frame = 0


Query: 7   MNMSTIRMENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRG 66
           MN S+ RME+NNDQ RG+KIFVGGL ++LTE+EFK+YFEKFGQITDVVVM DSVTNRPRG
Sbjct: 1   MNKSSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRG 60

Query: 67  FGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNAGHIPNARTLGGKSPLPNR 126
           FGFITFDSVESV+ VLQNNFHELNGRRVEVKRA+PK  N N+ +        GKSPL + 
Sbjct: 61  FGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNSSNPQR-----GKSPL-SP 120

Query: 127 DVPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNW-FPPSFGN------MASDG 186
            VP  YP++ +G  +YPG+ PFPH+       YGS+ YG+W +   +G       +    
Sbjct: 121 HVPLYYPHFSSGPVVYPGYAPFPHY-------YGSSLYGSWHYNGLYGTGHEAPPLPLGS 180

Query: 187 AWYSPNFFGVGMFPPPYRNSLISPSFSSKG--LSDTGTGNGMATRNGEIKQKTSGKRSMS 246
           AWY+PN FG GMFP PY NS+I P +SSKG  L D   GNG   RNG          +MS
Sbjct: 181 AWYAPNVFGDGMFPSPYINSVIHPVYSSKGGRLLDPMAGNG--RRNG----------NMS 226

Query: 247 ADAVPFQIKDK 249
           ADAVPFQ+ ++
Sbjct: 241 ADAVPFQLNNR 226

[Close]

BLAST of CaUC05G106230 vs. ExPASy TrEMBL
Match: A0A5N6R9D7 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_013735 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.1e-46
Identity = 104/212 (49.06%), Postives = 133/212 (62.74%), Query Frame = 0


Query: 15  ENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDS 74
           +N ++Q R +KIFVGGLSA LTE+EFK YF++FG++TDVVVMHDS T+RPRGFGFITFDS
Sbjct: 108 DNGDNQFRTKKIFVGGLSASLTEEEFKNYFKRFGRVTDVVVMHDSTTHRPRGFGFITFDS 167

Query: 75  VESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNAGHIPNARTLGGKSPLPNRDVPFPYPY 134
            ESV++V+QN+FHELNGR VEVKRA+PK+ N  +    N R  GG      R  P  +P 
Sbjct: 168 EESVENVMQNSFHELNGRLVEVKRAVPKEVNNGSDSGFNTRIEGG------RGSPGSFPP 227

Query: 135 YGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPS--------FGNMASDGAWYSPNF 194
           Y   Y I PG+ PFP F G G  LYG++ Y  W+P             +A    WY P  
Sbjct: 228 YSLRYWILPGYVPFPGFSGGGGSLYGASMYSGWYPSGGSGGVGSVVAPLAPRNPWYGPRV 287

Query: 195 FGVGMFPPPYRNSLISPSFSSKGLSDTGTGNG 219
            G G FP P  ++ I P++ + G+   G   G
Sbjct: 288 IGAGAFPLPPGSASIYPAYFTGGVGGIGMSAG 313

[Close]

BLAST of CaUC05G106230 vs. TAIR 10
Match: AT1G58470.1 (RNA-binding protein 1 )

HSP 1 Score: 137.5 bits (345), Expect = 1.5e-32
Identity = 91/207 (43.96%), Postives = 117/207 (56.52%), Query Frame = 0


Query: 5   QRMNMSTIRMENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRP 64
           Q+MN     M +N    R +KIFVGGLS+  TE+EFK+YFE+FG+ TDVVVMHD VTNRP
Sbjct: 101 QQMNGGLREMSSNGVTSRTKKIFVGGLSSNTTEEEFKSYFERFGRTTDVVVMHDGVTNRP 160

Query: 65  RGFGFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKG----NYNAGHIPNARTLGGK 124
           RGFGF+T+DS +SV+ V+Q+NFHEL+ +RVEVKRAIPK+G    N NA +IP        
Sbjct: 161 RGFGFVTYDSEDSVEVVMQSNFHELSDKRVEVKRAIPKEGIQSNNGNAVNIP-------- 220

Query: 125 SPLPNRDVPFPYPYYGTGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFP--PSFGNMASD 184
            P  +     PY     GY +   F P P FG      Y  N     +P    F    ++
Sbjct: 221 -PSYSSFQATPYVPEQNGYGMVLQFPP-PVFG------YHHNVQAVQYPYGYQFTAQVAN 280

Query: 185 GAWYSPNFFGVGMF-------PPPYRN 199
            +W +P     G +       PPP  N
Sbjct: 281 VSWNNPIMQPTGFYCAPPHPTPPPTNN 291

[Close]

BLAST of CaUC05G106230 vs. TAIR 10
Match: AT4G26650.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 124.8 bits (312), Expect = 9.8e-29
Identity = 74/158 (46.84%), Postives = 88/158 (55.70%), Query Frame = 0


Query: 17  NNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVE 76
           N    R +KIFVGGL + +TE EFK YF++FG I DVVVM+D  T RPRGFGFITFDS E
Sbjct: 115 NGGGARTKKIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEE 174

Query: 77  SVDSVLQNNFHELNGRRVEVKRAIPKKGNYNAGHIPNARTLGGKSPLPNRDVPFPYPYYG 136
           SVD VL   FHELNG+ VEVKRA+PK+ +               S  PNR    P   YG
Sbjct: 175 SVDMVLHKTFHELNGKMVEVKRAVPKELS---------------STTPNRS---PLIGYG 234

Query: 137 TGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGN 175
             Y + P  +              +N Y N FPP + N
Sbjct: 235 NNYGVVPNRS-------------SANSYFNSFPPGYNN 241

[Close]

BLAST of CaUC05G106230 vs. TAIR 10
Match: AT4G14300.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 124.8 bits (312), Expect = 9.8e-29
Identity = 76/180 (42.22%), Postives = 104/180 (57.78%), Query Frame = 0


Query: 8   NMSTIRMENNNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGF 67
           N++T R    +   + +KIFVGGL   LT++EF+ YFE +G +TDV +M+D  TNRPRGF
Sbjct: 94  NLNTSRSSGGDAYNKTKKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGF 153

Query: 68  GFITFDSVESVDSVLQNNFHELNGRRVEVKRAIPKKGNYNAGHIPNARTLGGKSPLPNRD 127
           GF++FDS ++VDSVL   FH+L+G++VEVKRA+PK  N   G     R++GG        
Sbjct: 154 GFVSFDSEDAVDSVLHKTFHDLSGKQVEVKRALPKDANPGGG----GRSMGGGG------ 213

Query: 128 VPFPYPYYGTGYTIYPGFTPFPHF-----GGPGVDLYGSNFYGNWFPPSFGNMASDGAWY 183
               Y  YG   + Y G      F      G G+  YGS+ YG      +GN  S+GA Y
Sbjct: 214 -SGGYQGYGGNESSYDGRMDSNRFLQHQSVGNGLPSYGSSGYG----AGYGN-GSNGAGY 257

[Close]

BLAST of CaUC05G106230 vs. TAIR 10
Match: AT4G26650.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 124.8 bits (312), Expect = 9.8e-29
Identity = 74/158 (46.84%), Postives = 88/158 (55.70%), Query Frame = 0


Query: 17  NNDQCRGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVE 76
           N    R +KIFVGGL + +TE EFK YF++FG I DVVVM+D  T RPRGFGFITFDS E
Sbjct: 112 NGGGARTKKIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEE 171

Query: 77  SVDSVLQNNFHELNGRRVEVKRAIPKKGNYNAGHIPNARTLGGKSPLPNRDVPFPYPYYG 136
           SVD VL   FHELNG+ VEVKRA+PK+ +               S  PNR    P   YG
Sbjct: 172 SVDMVLHKTFHELNGKMVEVKRAVPKELS---------------STTPNRS---PLIGYG 231

Query: 137 TGYTIYPGFTPFPHFGGPGVDLYGSNFYGNWFPPSFGN 175
             Y + P  +              +N Y N FPP + N
Sbjct: 232 NNYGVVPNRS-------------SANSYFNSFPPGYNN 238

[Close]

BLAST of CaUC05G106230 vs. TAIR 10
Match: AT3G07810.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 119.8 bits (299), Expect = 3.2e-27
Identity = 56/82 (68.29%), Postives = 67/82 (81.71%), Query Frame = 0


Query: 22  RGRKIFVGGLSAELTEDEFKTYFEKFGQITDVVVMHDSVTNRPRGFGFITFDSVESVDSV 81
           R RKIFVGGL + +TE +FKTYFE+FG  TDVVVM+D  T RPRGFGFIT+DS E+V+ V
Sbjct: 106 RTRKIFVGGLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKV 165

Query: 82  LQNNFHELNGRRVEVKRAIPKK 104
           L   FHELNG+ VEVKRA+PK+
Sbjct: 166 LLKTFHELNGKMVEVKRAVPKE 187

The following BLAST results are available for this feature:

BLAST of CaUC05G106230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898856.1	2.3e-120	86.64	RNA-binding protein 1-like [Benincasa hispida]	[more]
KAE8649895.1	3.2e-98	76.92	hypothetical protein Csa_012205 [Cucumis sativus]	[more]
XP_004141412.1	6.0e-97	77.05	RNA-binding protein 1 [Cucumis sativus]	[more]
KAG7037746.1	7.2e-82	67.34	RNA-binding protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022940975.1	1.4e-80	69.13	RNA-binding protein 1-like [Cucurbita moschata]	[more]

BLAST of CaUC05G106230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C652	2.1e-31	43.96	RNA-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBP1 PE=2 SV=1	[more]
Q8W034	1.4e-27	42.22	Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP...	[more]
Q9VVE5	2.8e-20	43.17	RNA-binding protein Musashi homolog Rbp6 OS=Drosophila melanogaster OX=7227 GN=R...	[more]
Q9JII5	4.0e-19	32.43	DAZ-associated protein 1 OS=Mus musculus OX=10090 GN=Dazap1 PE=1 SV=2	[more]
Q96EP5	6.9e-19	32.43	DAZ-associated protein 1 OS=Homo sapiens OX=9606 GN=DAZAP1 PE=1 SV=1	[more]

BLAST of CaUC05G106230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L563	2.9e-97	77.05	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G644730 PE=4 SV...	[more]
A0A6J1FS87	6.5e-81	69.13	RNA-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111446397 PE=4 SV...	[more]
A0A6J1J2K5	1.1e-80	68.22	RNA-binding protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481242 PE=4 SV=1	[more]
A0A6J1C724	1.9e-64	57.77	RNA-binding protein 1-like OS=Momordica charantia OX=3673 GN=LOC111008498 PE=4 S...	[more]
A0A5N6R9D7	1.1e-46	49.06	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_013735 PE=4 SV=1	[more]

BLAST of CaUC05G106230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G58470.1	1.5e-32	43.96	RNA-binding protein 1	[more]
AT4G26650.1	9.8e-29	46.84	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G14300.1	9.8e-29	42.22	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G26650.2	9.8e-29	46.84	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G07810.1	3.2e-27	68.29	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 25..97 e-value: 2.5E-25 score: 100.2
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 26..94 e-value: 1.4E-17 score: 63.2
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 24..101 score: 18.751446
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 21..110 e-value: 2.3E-27 score: 97.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..249
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..237
None	No IPR available	PANTHER	PTHR48032	RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6	coord: 6..240
None	No IPR available	PANTHER	PTHR48032:SF12	NUCLEOTIDE-BINDING ALPHA-BETA PLAIT DOMAIN-CONTAINING PROTEIN-RELATED	coord: 6..240
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 22..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC05G106230.1	CaUC05G106230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding