CaUC05G105090 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC05G105090
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	axial regulator YABBY 4
Location	Ciama_Chr05: 35552853 .. 35554230 (-)
RNA-Seq Expression	CaUC05G105090
Synteny	CaUC05G105090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCTACATGTTTCTTGTTTTGGTCTTTACTTTCGTCCCGAAATGCAGGTCAGTGTGCCGTGCGGCAGCTTATCGATGGCGGTGACTGTGACGTGTGGCCACTGCTCGAGCCTCCTTTCTGTTAACATGATGAAAGCCACTCTGGTTCCTCTTCATTTTCTGTCTTCTTTATCTCGCAATGTGGTATTTGGAGATTTTTTTTTCCACTTTCTCTTCATGAATTCTGATTTAATAATACTCATTATTTCATGTGTTGTTAAAGTTAATTTTTTCCCCTTCTTGTCTAATGTCATTTCAGCCCAAAGAAGCTTGTAGAGAAATGAATTCAGGGAAGTTCTTTGACAGTTTCAAAAGACCAAACTTGAAATTTTCTGAGTATGAAGTTGAAGAAGGCTTGATTCCTGCCACACCTCCTTTTGTAAACAAACGTAAGATCAACATTGGCAAACAATTATACTTGCAACAATAAAATGAACAAATCTGAAAATTTCTATCTTAGTAATATCTTTTCCATTGAATGATCATTTGAAGCTCCTGAGAAGAGACAACGTGCCCCATCAGCATACAACTGTTTCATCAAGTAAGATATCAACGTTTCATACTTTTTGCTAATCTTATCATGAGTTTGGGATGACTTTTTATAAGAATAGTACTTTTGAATGAAAGTACTTCAAGAAGCACTTTTAAGATTGTAGAGAAACATTTTTCAATCTAATATGTTTGTGTTTGGGACAGGGATGAAATCAGAAGGCTCAAAGCTCACAATCCGGAAATGACTCACAAGGAGGCCTTTAGAACAGCTGCAAAGAATGTAAGCAACAGTCTCCAGTCAACTTAATTATGATCAGATTAGGAGCAATTATGTTTTCGTAATCCAAAACCGATTTTGATTTGTTTCAGTGGGCAAATTTCCCTCCAATACAAGAAAAAGAAGACACAGAGAACTGTAATCAGATTGAGGTAAAAATACGAACTTTGGCATAAAAAATTATGATATTCAATTAACACTTCAAACCAAGTTGCATGAATCTTTATCAGTAATTGTTCATAACAATATTTGAGAAAATGGTCCTTTTCATTGAACAACCCCAAGACAAATTTATGAGACTGCCATTAATGGGGCAGGAGCATTGAGTGCAAAGCTTATAACAATTTTTATGGCAATTTTAAGCAACTGACTTAGTGACACATTATGATGAGTTTGTGTTTTGAAAAAAATTTCAGGTTCACAAGGATGGAAAGTGTTTCCCAAGGCATTCATTTTTGACATAACTCACCATTTCAGTGAAGCCATAAGGGGTGCAATGCTTTCAGTTTCTGCTTTGTTACTTCATTTAGGAAAAAAGGCTTAAAATTCCAATGTCTTAAAAAGGAT

mRNA sequence

ATGATTCTACATGTTTCTTGTTTTGGTCTTTACTTTCGTCCCGAAATGCAGGTCAGTGTGCCGTGCGGCAGCTTATCGATGGCGGTGACTGTGACGTGTGGCCACTGCTCGAGCCTCCTTTCTGTTAACATGATGAAAGCCACTCTGGTTCCTCTTCATTTTCTGTCTTCTTTATCTCGCAATGTGCCCAAAGAAGCTTGTAGAGAAATGAATTCAGGGAAGTTCTTTGACAGTTTCAAAAGACCAAACTTGAAATTTTCTGAGTATGAAGTTGAAGAAGGCTTGATTCCTGCCACACCTCCTTTTGTAAACAAACCTCCTGAGAAGAGACAACGTGCCCCATCAGCATACAACTGTTTCATCAAGGATGAAATCAGAAGGCTCAAAGCTCACAATCCGGAAATGACTCACAAGGAGGCCTTTAGAACAGCTGCAAAGAATTGGGCAAATTTCCCTCCAATACAAGAAAAAGAAGACACAGAGAACTGTTCACAAGGATGGAAAGTGTTTCCCAAGGCATTCATTTTTGACATAACTCACCATTTCAGTGAAGCCATAAGGGGTGCAATGCTTTCAGTTTCTGCTTTGTTACTTCATTTAGGAAAAAAGGCTTAAAATTCCAATGTCTTAAAAAGGAT

Coding sequence (CDS)

ATGATTCTACATGTTTCTTGTTTTGGTCTTTACTTTCGTCCCGAAATGCAGGTCAGTGTGCCGTGCGGCAGCTTATCGATGGCGGTGACTGTGACGTGTGGCCACTGCTCGAGCCTCCTTTCTGTTAACATGATGAAAGCCACTCTGGTTCCTCTTCATTTTCTGTCTTCTTTATCTCGCAATGTGCCCAAAGAAGCTTGTAGAGAAATGAATTCAGGGAAGTTCTTTGACAGTTTCAAAAGACCAAACTTGAAATTTTCTGAGTATGAAGTTGAAGAAGGCTTGATTCCTGCCACACCTCCTTTTGTAAACAAACCTCCTGAGAAGAGACAACGTGCCCCATCAGCATACAACTGTTTCATCAAGGATGAAATCAGAAGGCTCAAAGCTCACAATCCGGAAATGACTCACAAGGAGGCCTTTAGAACAGCTGCAAAGAATTGGGCAAATTTCCCTCCAATACAAGAAAAAGAAGACACAGAGAACTGTTCACAAGGATGGAAAGTGTTTCCCAAGGCATTCATTTTTGACATAACTCACCATTTCAGTGAAGCCATAAGGGGTGCAATGCTTTCAGTTTCTGCTTTGTTACTTCATTTAGGAAAAAAGGCTTAA

Protein sequence

MILHVSCFGLYFRPEMQVSVPCGSLSMAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSRNVPKEACREMNSGKFFDSFKRPNLKFSEYEVEEGLIPATPPFVNKPPEKRQRAPSAYNCFIKDEIRRLKAHNPEMTHKEAFRTAAKNWANFPPIQEKEDTENCSQGWKVFPKAFIFDITHHFSEAIRGAMLSVSALLLHLGKKA

Homology

[Close]

BLAST of CaUC05G105090 vs. NCBI nr
Match: XP_038893210.1 (axial regulator YABBY 4 isoform X2 [Benincasa hispida])

HSP 1 Score: 276.2 bits (705), Expect = 2.3e-70
Identity = 135/148 (91.22%), Postives = 137/148 (92.57%), Query Frame = 0


Query: 18  VSVPCGSLSMAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSRNVPKEACREMNSGKFFD 77
           VSVPC SLS AVTVTCGHCSSLLSVNMMKA LVPLHFLSSLS NVPKEACREMNSGKFFD
Sbjct: 25  VSVPCSSLSTAVTVTCGHCSSLLSVNMMKANLVPLHFLSSLSCNVPKEACREMNSGKFFD 84

Query: 78  SFKRPNLKFSEYEVEEGLIPATPPFVNKPPEKRQRAPSAYNCFIKDEIRRLKAHNPEMTH 137
           SFKR  LKFSEYEVEEGLIP TPPFVNKPPEKRQRAPSAYNCFIKDEIRRLKA NPEMTH
Sbjct: 85  SFKRSKLKFSEYEVEEGLIPVTPPFVNKPPEKRQRAPSAYNCFIKDEIRRLKAQNPEMTH 144

Query: 138 KEAFRTAAKNWANFPPIQEKEDTENCSQ 166
           KEAFRTAAKNWANFPPI EKEDT  C++
Sbjct: 145 KEAFRTAAKNWANFPPIHEKEDTMGCNE 172

[Close]

BLAST of CaUC05G105090 vs. NCBI nr
Match: XP_038893208.1 (axial regulator YABBY 4 isoform X1 [Benincasa hispida] >XP_038893209.1 axial regulator YABBY 4 isoform X1 [Benincasa hispida])

HSP 1 Score: 276.2 bits (705), Expect = 2.3e-70
Identity = 135/148 (91.22%), Postives = 137/148 (92.57%), Query Frame = 0


Query: 18  VSVPCGSLSMAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSRNVPKEACREMNSGKFFD 77
           VSVPC SLS AVTVTCGHCSSLLSVNMMKA LVPLHFLSSLS NVPKEACREMNSGKFFD
Sbjct: 34  VSVPCSSLSTAVTVTCGHCSSLLSVNMMKANLVPLHFLSSLSCNVPKEACREMNSGKFFD 93

Query: 78  SFKRPNLKFSEYEVEEGLIPATPPFVNKPPEKRQRAPSAYNCFIKDEIRRLKAHNPEMTH 137
           SFKR  LKFSEYEVEEGLIP TPPFVNKPPEKRQRAPSAYNCFIKDEIRRLKA NPEMTH
Sbjct: 94  SFKRSKLKFSEYEVEEGLIPVTPPFVNKPPEKRQRAPSAYNCFIKDEIRRLKAQNPEMTH 153

Query: 138 KEAFRTAAKNWANFPPIQEKEDTENCSQ 166
           KEAFRTAAKNWANFPPI EKEDT  C++
Sbjct: 154 KEAFRTAAKNWANFPPIHEKEDTMGCNE 181

[Close]

BLAST of CaUC05G105090 vs. NCBI nr
Match: XP_008446193.1 (PREDICTED: axial regulator YABBY 4 [Cucumis melo])

HSP 1 Score: 272.3 bits (695), Expect = 3.3e-69
Identity = 134/148 (90.54%), Postives = 136/148 (91.89%), Query Frame = 0


Query: 18  VSVPCGSLSMAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSRNVPKEACREMNSGKFFD 77
           VSVPC SLSMAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLS NVPKE  REMNSGKFFD
Sbjct: 25  VSVPCSSLSMAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSHNVPKETYREMNSGKFFD 84

Query: 78  SFKRPNLKFSEYEVEEGLIPATPPFVNKPPEKRQRAPSAYNCFIKDEIRRLKAHNPEMTH 137
           SFKR  LKFSEYEVEE LIPAT PFVNKPPEKRQRAPSAYNCFIKDEIRRLK  NPEMTH
Sbjct: 85  SFKRSKLKFSEYEVEEDLIPATTPFVNKPPEKRQRAPSAYNCFIKDEIRRLKTQNPEMTH 144

Query: 138 KEAFRTAAKNWANFPPIQEKEDTENCSQ 166
           KEAFRTAAKNWANFPPIQEK+D E C+Q
Sbjct: 145 KEAFRTAAKNWANFPPIQEKDDKEKCNQ 172

[Close]

BLAST of CaUC05G105090 vs. NCBI nr
Match: KAE8648718.1 (hypothetical protein Csa_008048, partial [Cucumis sativus])

HSP 1 Score: 270.8 bits (691), Expect = 9.7e-69
Identity = 132/148 (89.19%), Postives = 136/148 (91.89%), Query Frame = 0


Query: 18  VSVPCGSLSMAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSRNVPKEACREMNSGKFFD 77
           VSVPC SLSMAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLS NVPKE  REMNSGKFFD
Sbjct: 44  VSVPCSSLSMAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSHNVPKETYREMNSGKFFD 103

Query: 78  SFKRPNLKFSEYEVEEGLIPATPPFVNKPPEKRQRAPSAYNCFIKDEIRRLKAHNPEMTH 137
           SFKR NLKFSEYEVE+ LIP T PFVNKPPE+RQRAPSAYNCFIKDEIRRLK  NPEMTH
Sbjct: 104 SFKRSNLKFSEYEVEDDLIPVTTPFVNKPPERRQRAPSAYNCFIKDEIRRLKTQNPEMTH 163

Query: 138 KEAFRTAAKNWANFPPIQEKEDTENCSQ 166
           KEAFRTAAKNWANFPPIQEK+D E C+Q
Sbjct: 164 KEAFRTAAKNWANFPPIQEKDDKEKCNQ 191

[Close]

BLAST of CaUC05G105090 vs. NCBI nr
Match: XP_004135480.2 (axial regulator YABBY 4 [Cucumis sativus])

HSP 1 Score: 270.8 bits (691), Expect = 9.7e-69
Identity = 132/148 (89.19%), Postives = 136/148 (91.89%), Query Frame = 0


Query: 18  VSVPCGSLSMAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSRNVPKEACREMNSGKFFD 77
           VSVPC SLSMAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLS NVPKE  REMNSGKFFD
Sbjct: 66  VSVPCSSLSMAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSHNVPKETYREMNSGKFFD 125

Query: 78  SFKRPNLKFSEYEVEEGLIPATPPFVNKPPEKRQRAPSAYNCFIKDEIRRLKAHNPEMTH 137
           SFKR NLKFSEYEVE+ LIP T PFVNKPPE+RQRAPSAYNCFIKDEIRRLK  NPEMTH
Sbjct: 126 SFKRSNLKFSEYEVEDDLIPVTTPFVNKPPERRQRAPSAYNCFIKDEIRRLKTQNPEMTH 185

Query: 138 KEAFRTAAKNWANFPPIQEKEDTENCSQ 166
           KEAFRTAAKNWANFPPIQEK+D E C+Q
Sbjct: 186 KEAFRTAAKNWANFPPIQEKDDKEKCNQ 213

[Close]

BLAST of CaUC05G105090 vs. ExPASy Swiss-Prot
Match: Q9LDT3 (Axial regulator YABBY 4 OS=Arabidopsis thaliana OX=3702 GN=YAB4 PE=1 SV=2)

HSP 1 Score: 146.7 bits (369), Expect = 2.8e-34
Identity = 88/169 (52.07%), Postives = 103/169 (60.95%), Query Frame = 0


Query: 2   ILHVSCFGLYFRPEMQVSVPCGSLSMAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSR- 61
           I HV C   +    + VSVP  SLSM VTV CGHC+SLLSVN+MKA+ +PLH L+SLS  
Sbjct: 21  ICHVQCG--FCTTILLVSVPFTSLSMVVTVRCGHCTSLLSVNLMKASFIPLHLLASLSHL 80

Query: 62  ------------NVPKEACREMNSGKFFDSFKRPNLKFSEYEVEEGLIPATPPFVNKPPE 121
                        V +EA + +N  K       P    S  + E+  +      VNKPPE
Sbjct: 81  DETGKEEVAATDGVEEEAWK-VNQEK----ENSPTTLVSSSDNEDEDVSRVYQVVNKPPE 140

Query: 122 KRQRAPSAYNCFIKDEIRRLKAHNPEMTHKEAFRTAAKNWANFPPIQEK 158
           KRQRAPSAYNCFIK+EIRRLKA NP M HKEAF  AAKNWA+FPP   K
Sbjct: 141 KRQRAPSAYNCFIKEEIRRLKAQNPSMAHKEAFSLAAKNWAHFPPAHNK 182

[Close]

BLAST of CaUC05G105090 vs. ExPASy Swiss-Prot
Match: A2PZN8 (Protein YABBY 7 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB7 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.0e-24
Identity = 61/146 (41.78%), Postives = 87/146 (59.59%), Query Frame = 0


Query: 18  VSVPCGSLSMAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSRNVPKEACREMNSGKFFD 77
           VSVPC S+   V V CGHCS +LS     A  +P   +S+     P+E       G++ D
Sbjct: 30  VSVPCSSVLRVVAVQCGHCSGILS-----AVNLPPSPVSASIELTPQELDAGPPPGEYSD 89

Query: 78  SFKRPNLKFSEYEVEEGLIPATPPFVNKPPEKRQRAPSAYNCFIKDEIRRLKAHNPEMTH 137
                + +  + E ++   PA     NKPP ++QR PSAYNCF+K+EI+R+K+  P +TH
Sbjct: 90  ESSGDDREGRDAE-DDAPAPAAAAVANKPPGRKQRTPSAYNCFVKEEIKRIKSMEPNITH 149

Query: 138 KEAFRTAAKNWANFPPIQEKEDTENC 164
           K+AF TAAKNWA+ P IQ+K   ++C
Sbjct: 150 KQAFSTAAKNWAHLPRIQQKRGRDSC 169

[Close]

BLAST of CaUC05G105090 vs. ExPASy Swiss-Prot
Match: Q8GW46 (Axial regulator YABBY 5 OS=Arabidopsis thaliana OX=3702 GN=YAB5 PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.7e-23
Identity = 68/140 (48.57%), Postives = 85/140 (60.71%), Query Frame = 0


Query: 16  MQVSVPCGSLSMAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSR-NVPKEACREMNSGK 75
           + V+VPC SL   VTV CGHC++L SVNM  A       L SLSR N           G 
Sbjct: 23  LAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAA-------LQSLSRPNFQATNYAVPEYGS 82

Query: 76  FFDSFKRPNLKFSEYEVEEGLIPATPPFVNKPPEKRQRAPSAYNCFIKDEIRRLKAHNPE 135
              S  +   + S   + E  I      VN+PPEKRQR PSAYN FIK+EI+R+KA+NP+
Sbjct: 83  SSRSHTKIPSRISTRTITEQRI------VNRPPEKRQRVPSAYNQFIKEEIQRIKANNPD 142

Query: 136 MTHKEAFRTAAKNWANFPPI 155
           ++H+EAF TAAKNWA+FP I
Sbjct: 143 ISHREAFSTAAKNWAHFPHI 149

[Close]

BLAST of CaUC05G105090 vs. ExPASy Swiss-Prot
Match: Q9XFB1 (Axial regulator YABBY 3 OS=Arabidopsis thaliana OX=3702 GN=YAB3 PE=1 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.8e-23
Identity = 72/161 (44.72%), Postives = 91/161 (56.52%), Query Frame = 0


Query: 16  MQVSVPCGSLSMAVTVTCGHCSSLLSVNM-MKATLVPL------HFLSSLSRNVPKEACR 75
           + VSVP  SL   VTV CGHCS+LLSV + M+A L+P        FL       P     
Sbjct: 37  LAVSVPPSSLFKTVTVRCGHCSNLLSVTVSMRALLLPSVSNLGHSFLPPPPPPPPPNLLE 96

Query: 76  EMNS-GKFFDSFKRPNLKFSEYEVEEGLIPAT--------------PPFVNKPPEKRQRA 135
           EM S G+  +     +   S +   E L+ AT              PP  N+PPEKRQR 
Sbjct: 97  EMRSGGQNINMNMMMSHHASAHHPNEHLVMATRNGRSVDHLQEMPRPPPANRPPEKRQRV 156

Query: 136 PSAYNCFIKDEIRRLKAHNPEMTHKEAFRTAAKNWANFPPI 155
           PSAYN FIK+EI+R+KA NP+++H+EAF  AAKNWA+FP I
Sbjct: 157 PSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHI 197

[Close]

BLAST of CaUC05G105090 vs. ExPASy Swiss-Prot
Match: Q10FZ7 (Protein YABBY 2 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB2 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.2e-21
Identity = 67/142 (47.18%), Postives = 90/142 (63.38%), Query Frame = 0


Query: 18  VSVPCGSLSMAVTVTCGHCSSLLSVN---MMKATLVPLHFLSSLSRNVPKEACREMNSGK 77
           VSVP  S+   VTV CGHC+SLLSVN   +++A     H   +L  +    + RE N  +
Sbjct: 26  VSVPSNSMLNIVTVRCGHCTSLLSVNLRGLVQALPAEDHLQDNLKMH--NMSFRE-NYSE 85

Query: 78  FFDS--FKRPNLKFSEYEVEEGLIPATPPFVNKPPEKRQRAPSAYNCFIKDEIRRLKAHN 137
           +  S  + R  + FS+ + E  L         +PPEKRQR PSAYN FIK+EIRR+KA+N
Sbjct: 86  YGSSSRYGRVPMMFSKNDTEHMLHV-------RPPEKRQRVPSAYNRFIKEEIRRIKANN 145

Query: 138 PEMTHKEAFRTAAKNWANFPPI 155
           P+++H+EAF TAAKNWA+FP I
Sbjct: 146 PDISHREAFSTAAKNWAHFPNI 157

[Close]

BLAST of CaUC05G105090 vs. ExPASy TrEMBL
Match: A0A1S3BDZ8 (axial regulator YABBY 4 OS=Cucumis melo OX=3656 GN=LOC103488996 PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.6e-69
Identity = 134/148 (90.54%), Postives = 136/148 (91.89%), Query Frame = 0


Query: 18  VSVPCGSLSMAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSRNVPKEACREMNSGKFFD 77
           VSVPC SLSMAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLS NVPKE  REMNSGKFFD
Sbjct: 25  VSVPCSSLSMAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSHNVPKETYREMNSGKFFD 84

Query: 78  SFKRPNLKFSEYEVEEGLIPATPPFVNKPPEKRQRAPSAYNCFIKDEIRRLKAHNPEMTH 137
           SFKR  LKFSEYEVEE LIPAT PFVNKPPEKRQRAPSAYNCFIKDEIRRLK  NPEMTH
Sbjct: 85  SFKRSKLKFSEYEVEEDLIPATTPFVNKPPEKRQRAPSAYNCFIKDEIRRLKTQNPEMTH 144

Query: 138 KEAFRTAAKNWANFPPIQEKEDTENCSQ 166
           KEAFRTAAKNWANFPPIQEK+D E C+Q
Sbjct: 145 KEAFRTAAKNWANFPPIQEKDDKEKCNQ 172

[Close]

BLAST of CaUC05G105090 vs. ExPASy TrEMBL
Match: A0A0A0KTN4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G600930 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 4.7e-69
Identity = 132/148 (89.19%), Postives = 136/148 (91.89%), Query Frame = 0


Query: 18  VSVPCGSLSMAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSRNVPKEACREMNSGKFFD 77
           VSVPC SLSMAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLS NVPKE  REMNSGKFFD
Sbjct: 25  VSVPCSSLSMAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSHNVPKETYREMNSGKFFD 84

Query: 78  SFKRPNLKFSEYEVEEGLIPATPPFVNKPPEKRQRAPSAYNCFIKDEIRRLKAHNPEMTH 137
           SFKR NLKFSEYEVE+ LIP T PFVNKPPE+RQRAPSAYNCFIKDEIRRLK  NPEMTH
Sbjct: 85  SFKRSNLKFSEYEVEDDLIPVTTPFVNKPPERRQRAPSAYNCFIKDEIRRLKTQNPEMTH 144

Query: 138 KEAFRTAAKNWANFPPIQEKEDTENCSQ 166
           KEAFRTAAKNWANFPPIQEK+D E C+Q
Sbjct: 145 KEAFRTAAKNWANFPPIQEKDDKEKCNQ 172

[Close]

BLAST of CaUC05G105090 vs. ExPASy TrEMBL
Match: A0A6J1JEX5 (axial regulator YABBY 4 isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111483786 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.1e-65
Identity = 130/161 (80.75%), Postives = 139/161 (86.34%), Query Frame = 0


Query: 18  VSVPCGSLSMAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSRNVPKEACREMNSGKFFD 77
           VSVPC SLSM VTVTCGHCSSLLSVNM++ATLVPLHFLSSLSRN+PKE CREM+SGK FD
Sbjct: 25  VSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLHFLSSLSRNLPKETCREMSSGKLFD 84

Query: 78  SFKRPNLKFSEYEVEEGLIPATPPFVNKPPEKRQRAPSAYNCFIKDEIRRLKAHNPEMTH 137
           SF R NLKFSEYEVEEGLIP TPP VNKPPEKRQR PSAYNCFIKDEIRRLKA NP+MTH
Sbjct: 85  SFIRSNLKFSEYEVEEGLIPVTPPSVNKPPEKRQRVPSAYNCFIKDEIRRLKAENPQMTH 144

Query: 138 KEAFRTAAKNWANFPP-IQEKEDTEN-----CSQGWKVFPK 173
           KEAFRTAAKNWANFPP IQ+KED +N       +  K FP+
Sbjct: 145 KEAFRTAAKNWANFPPTIQQKEDPQNTQIPEVEKNGKCFPR 185

[Close]

BLAST of CaUC05G105090 vs. ExPASy TrEMBL
Match: A0A6J1H0F2 (axial regulator YABBY 4-like isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111458453 PE=3 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.4e-65
Identity = 130/161 (80.75%), Postives = 140/161 (86.96%), Query Frame = 0


Query: 18  VSVPCGSLSMAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSRNVPKEACREMNSGKFFD 77
           VSVPC SLSM VTVTCGHCSSLLSVNM++ATLVPLHFLSSLSRN+PKEACREM+SGK FD
Sbjct: 25  VSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLHFLSSLSRNLPKEACREMSSGKLFD 84

Query: 78  SFKRPNLKFSEYEVEEGLIPATPPFVNKPPEKRQRAPSAYNCFIKDEIRRLKAHNPEMTH 137
           SF R NLKFSEYEVEEGLIP TPP V+KPPEKRQR PSAYNCFIKDEIRRLKA NP+MTH
Sbjct: 85  SFIRSNLKFSEYEVEEGLIPVTPPSVHKPPEKRQRVPSAYNCFIKDEIRRLKAENPQMTH 144

Query: 138 KEAFRTAAKNWANFPP-IQEKEDTEN-----CSQGWKVFPK 173
           KEAFRTAAKNWANFPP IQ+KED +N       +  K FP+
Sbjct: 145 KEAFRTAAKNWANFPPTIQQKEDPQNTQIPEVEKNGKCFPR 185

[Close]

BLAST of CaUC05G105090 vs. ExPASy TrEMBL
Match: A0A6J1JCH4 (axial regulator YABBY 4 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111483786 PE=3 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 2.4e-65
Identity = 127/146 (86.99%), Postives = 134/146 (91.78%), Query Frame = 0


Query: 18  VSVPCGSLSMAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSRNVPKEACREMNSGKFFD 77
           VSVPC SLSM VTVTCGHCSSLLSVNM++ATLVPLHFLSSLSRN+PKE CREM+SGK FD
Sbjct: 25  VSVPCSSLSMEVTVTCGHCSSLLSVNMLRATLVPLHFLSSLSRNLPKETCREMSSGKLFD 84

Query: 78  SFKRPNLKFSEYEVEEGLIPATPPFVNKPPEKRQRAPSAYNCFIKDEIRRLKAHNPEMTH 137
           SF R NLKFSEYEVEEGLIP TPP VNKPPEKRQR PSAYNCFIKDEIRRLKA NP+MTH
Sbjct: 85  SFIRSNLKFSEYEVEEGLIPVTPPSVNKPPEKRQRVPSAYNCFIKDEIRRLKAENPQMTH 144

Query: 138 KEAFRTAAKNWANFPP-IQEKEDTEN 163
           KEAFRTAAKNWANFPP IQ+KED +N
Sbjct: 145 KEAFRTAAKNWANFPPTIQQKEDPQN 170

[Close]

BLAST of CaUC05G105090 vs. TAIR 10
Match: AT1G23420.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 146.7 bits (369), Expect = 2.0e-35
Identity = 88/169 (52.07%), Postives = 103/169 (60.95%), Query Frame = 0


Query: 2   ILHVSCFGLYFRPEMQVSVPCGSLSMAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSR- 61
           I HV C   +    + VSVP  SLSM VTV CGHC+SLLSVN+MKA+ +PLH L+SLS  
Sbjct: 21  ICHVQCG--FCTTILLVSVPFTSLSMVVTVRCGHCTSLLSVNLMKASFIPLHLLASLSHL 80

Query: 62  ------------NVPKEACREMNSGKFFDSFKRPNLKFSEYEVEEGLIPATPPFVNKPPE 121
                        V +EA + +N  K       P    S  + E+  +      VNKPPE
Sbjct: 81  DETGKEEVAATDGVEEEAWK-VNQEK----ENSPTTLVSSSDNEDEDVSRVYQVVNKPPE 140

Query: 122 KRQRAPSAYNCFIKDEIRRLKAHNPEMTHKEAFRTAAKNWANFPPIQEK 158
           KRQRAPSAYNCFIK+EIRRLKA NP M HKEAF  AAKNWA+FPP   K
Sbjct: 141 KRQRAPSAYNCFIKEEIRRLKAQNPSMAHKEAFSLAAKNWAHFPPAHNK 182

[Close]

BLAST of CaUC05G105090 vs. TAIR 10
Match: AT4G00180.2 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 111.3 bits (277), Expect = 9.2e-25
Identity = 73/160 (45.62%), Postives = 91/160 (56.88%), Query Frame = 0


Query: 17  QVSVPCGSLSMAVTVTCGHCSSLLSVNM-MKATLVPL------HFLSSLSRNVPKEACRE 76
           QVSVP  SL   VTV CGHCS+LLSV + M+A L+P        FL       P     E
Sbjct: 7   QVSVPPSSLFKTVTVRCGHCSNLLSVTVSMRALLLPSVSNLGHSFLPPPPPPPPPNLLEE 66

Query: 77  MNS-GKFFDSFKRPNLKFSEYEVEEGLIPAT--------------PPFVNKPPEKRQRAP 136
           M S G+  +     +   S +   E L+ AT              PP  N+PPEKRQR P
Sbjct: 67  MRSGGQNINMNMMMSHHASAHHPNEHLVMATRNGRSVDHLQEMPRPPPANRPPEKRQRVP 126

Query: 137 SAYNCFIKDEIRRLKAHNPEMTHKEAFRTAAKNWANFPPI 155
           SAYN FIK+EI+R+KA NP+++H+EAF  AAKNWA+FP I
Sbjct: 127 SAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHI 166

[Close]

BLAST of CaUC05G105090 vs. TAIR 10
Match: AT2G26580.1 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 110.9 bits (276), Expect = 1.2e-24
Identity = 68/140 (48.57%), Postives = 85/140 (60.71%), Query Frame = 0


Query: 16  MQVSVPCGSLSMAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSR-NVPKEACREMNSGK 75
           + V+VPC SL   VTV CGHC++L SVNM  A       L SLSR N           G 
Sbjct: 23  LAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAA-------LQSLSRPNFQATNYAVPEYGS 82

Query: 76  FFDSFKRPNLKFSEYEVEEGLIPATPPFVNKPPEKRQRAPSAYNCFIKDEIRRLKAHNPE 135
              S  +   + S   + E  I      VN+PPEKRQR PSAYN FIK+EI+R+KA+NP+
Sbjct: 83  SSRSHTKIPSRISTRTITEQRI------VNRPPEKRQRVPSAYNQFIKEEIQRIKANNPD 142

Query: 136 MTHKEAFRTAAKNWANFPPI 155
           ++H+EAF TAAKNWA+FP I
Sbjct: 143 ISHREAFSTAAKNWAHFPHI 149

[Close]

BLAST of CaUC05G105090 vs. TAIR 10
Match: AT2G26580.2 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 110.9 bits (276), Expect = 1.2e-24
Identity = 68/140 (48.57%), Postives = 85/140 (60.71%), Query Frame = 0


Query: 16  MQVSVPCGSLSMAVTVTCGHCSSLLSVNMMKATLVPLHFLSSLSR-NVPKEACREMNSGK 75
           + V+VPC SL   VTV CGHC++L SVNM  A       L SLSR N           G 
Sbjct: 23  LAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAA-------LQSLSRPNFQATNYAVPEYGS 82

Query: 76  FFDSFKRPNLKFSEYEVEEGLIPATPPFVNKPPEKRQRAPSAYNCFIKDEIRRLKAHNPE 135
              S  +   + S   + E  I      VN+PPEKRQR PSAYN FIK+EI+R+KA+NP+
Sbjct: 83  SSRSHTKIPSRISTRTITEQRI------VNRPPEKRQRVPSAYNQFIKEEIQRIKANNPD 142

Query: 136 MTHKEAFRTAAKNWANFPPI 155
           ++H+EAF TAAKNWA+FP I
Sbjct: 143 ISHREAFSTAAKNWAHFPHI 149

[Close]

BLAST of CaUC05G105090 vs. TAIR 10
Match: AT4G00180.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 109.8 bits (273), Expect = 2.7e-24
Identity = 72/161 (44.72%), Postives = 91/161 (56.52%), Query Frame = 0


Query: 16  MQVSVPCGSLSMAVTVTCGHCSSLLSVNM-MKATLVPL------HFLSSLSRNVPKEACR 75
           + VSVP  SL   VTV CGHCS+LLSV + M+A L+P        FL       P     
Sbjct: 37  LAVSVPPSSLFKTVTVRCGHCSNLLSVTVSMRALLLPSVSNLGHSFLPPPPPPPPPNLLE 96

Query: 76  EMNS-GKFFDSFKRPNLKFSEYEVEEGLIPAT--------------PPFVNKPPEKRQRA 135
           EM S G+  +     +   S +   E L+ AT              PP  N+PPEKRQR 
Sbjct: 97  EMRSGGQNINMNMMMSHHASAHHPNEHLVMATRNGRSVDHLQEMPRPPPANRPPEKRQRV 156

Query: 136 PSAYNCFIKDEIRRLKAHNPEMTHKEAFRTAAKNWANFPPI 155
           PSAYN FIK+EI+R+KA NP+++H+EAF  AAKNWA+FP I
Sbjct: 157 PSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHI 197

The following BLAST results are available for this feature:

BLAST of CaUC05G105090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893210.1	2.3e-70	91.22	axial regulator YABBY 4 isoform X2 [Benincasa hispida]	[more]
XP_038893208.1	2.3e-70	91.22	axial regulator YABBY 4 isoform X1 [Benincasa hispida] >XP_038893209.1 axial reg...	[more]
XP_008446193.1	3.3e-69	90.54	PREDICTED: axial regulator YABBY 4 [Cucumis melo]	[more]
KAE8648718.1	9.7e-69	89.19	hypothetical protein Csa_008048, partial [Cucumis sativus]	[more]
XP_004135480.2	9.7e-69	89.19	axial regulator YABBY 4 [Cucumis sativus]	[more]

BLAST of CaUC05G105090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LDT3	2.8e-34	52.07	Axial regulator YABBY 4 OS=Arabidopsis thaliana OX=3702 GN=YAB4 PE=1 SV=2	[more]
A2PZN8	2.0e-24	41.78	Protein YABBY 7 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB7 PE=2 SV=1	[more]
Q8GW46	1.7e-23	48.57	Axial regulator YABBY 5 OS=Arabidopsis thaliana OX=3702 GN=YAB5 PE=1 SV=1	[more]
Q9XFB1	3.8e-23	44.72	Axial regulator YABBY 3 OS=Arabidopsis thaliana OX=3702 GN=YAB3 PE=1 SV=1	[more]
Q10FZ7	1.2e-21	47.18	Protein YABBY 2 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB2 PE=2 SV=1	[more]

BLAST of CaUC05G105090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BDZ8	1.6e-69	90.54	axial regulator YABBY 4 OS=Cucumis melo OX=3656 GN=LOC103488996 PE=3 SV=1	[more]
A0A0A0KTN4	4.7e-69	89.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G600930 PE=3 SV=1	[more]
A0A6J1JEX5	1.1e-65	80.75	axial regulator YABBY 4 isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111483786 P...	[more]
A0A6J1H0F2	1.4e-65	80.75	axial regulator YABBY 4-like isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1JCH4	2.4e-65	86.99	axial regulator YABBY 4 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111483786 P...	[more]

BLAST of CaUC05G105090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23420.1	2.0e-35	52.07	Plant-specific transcription factor YABBY family protein	[more]
AT4G00180.2	9.2e-25	45.63	Plant-specific transcription factor YABBY family protein	[more]
AT2G26580.1	1.2e-24	48.57	plant-specific transcription factor YABBY family protein	[more]
AT2G26580.2	1.2e-24	48.57	plant-specific transcription factor YABBY family protein	[more]
AT4G00180.1	2.7e-24	44.72	Plant-specific transcription factor YABBY family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006780	YABBY protein	PFAM	PF04690	YABBY	coord: 16..155 e-value: 1.3E-46 score: 159.2
IPR006780	YABBY protein	PANTHER	PTHR31675	PROTEIN YABBY 6-RELATED	coord: 18..165
IPR036910	High mobility group box domain superfamily	GENE3D	1.10.30.10	High mobility group box domain	coord: 103..169 e-value: 3.4E-8 score: 35.8
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 97..153
None	No IPR available	PANTHER	PTHR31675:SF8	AXIAL REGULATOR YABBY 4	coord: 18..165

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC05G105090.1	CaUC05G105090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007275	multicellular organism development