
CaUC05G103580 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGTTCTCTGTAATCGTACGGTCAGAATATTTACACCAAAACATTTATTTTCGATTTTCTTTTTTGAAACCCTAGGATTCTCGCTCCCCTCTTTTGGTTACCTTTGTTCTTCGTTTTTCTCGTGTATATAAATTCGCTTCTTTTCTTCAACCCACTCCGTCGCAATTCTCTGAGCCTGTTTAGTTTTCCGTCATCACCCTCTCTTTGAACTCTCTTTCCCTACAGAACCATGTCGGACGAGGAGCACCACTTCGAATCCAAGGCCGACGCCGGAGCTTCCAAGACTTATCCCCAGCAGGCTGGAACCATCCGCAAGAATGGTTACATTGTCATCAAGGGCAGACCTTGCAAGGTTCTTATCGTTTTCATTCTGATGTCTCAATTCACCCACATCGCCCATTTATCCGCATGATTCTTGTTTAATATGATACCTATGCGTTCAGTACTCTACTTCAATTTTTCCTATTCTTATTGCGTGAAGTTTGTAGTTTTTTCAAGGGCTTTCGTTTCCTTTGATCCCATCTTGTTCTCTGGTTTGTGTTAATTGTGTTTCTGTTCTGCCTTTTATTTAGGTTTGTCTTCTGATTTATGTTGTCGTCCATGTAATTTATGGCATGTTTGGGAGTTATGTTAAATTCACTTTTGTTATTTTCAAAATCATTAAAAAAAAACGCTTTCTATCATTTAATCGATTTTAATAGCATAAAAAATGCATTTAAAAGTGTAAAACTAAAGACTGAACTGATTTTGACTGATCAAAAGTGTGTTTTGAAGGGATTTTAAATATGACAATATGCATTTTTCTTGATCAAATTTCTGCTTGGATAAAGTTGAATTGATGGACAATCTAGTAAGCTAAAGTGAAAGTACCGAGTTGCTTGAAGCTATATCATATTTCATTTTGTTGCTTTATAGGGTTTTCACCTTTTGTGGTTTCAGTATAATTTTACTGCGTTCTATATTGGTTTTCCAATTGACAATCTTGACCTCAGGCTTTTGCATTATCGTTTGTAGGTTGTTGAGGTTTCAACCTCAAAGACTGGAAAGCACGGACATGCTAAATGTCACTTTGTCGGCATTGACATTTTCACTGCTAAAAAGCTTGAAGATATTGTCCCCTCTTCACACAACTGTGACGTATGAATTCTTTTCCCCCCTTCTAATTCATACTTTTCTTAGCAAGTTGTAGGTTTGTTTATGATTTCTGATTCGTGCATTCATGAAACACAGGTTCCTCATGTCAGTCGCACTGATTACCAGCTCATTGATATCTCTGAGGATGGATTTGTATGATAAATTCTCTTTGTTTACATCTTATATCAGTTTCCCCTAGTTGTTCTTGTATAGTACTGTGGCTAACCTTAATTTCAATGACAATTTATCAGATTAGCCTGCTGACAGACAGTGGTAACACCAAGGATGACCTGAGGCTTCCAACTGATGAGAGTCTGCTGTCCCAGGTAATATTTTCTTATTGGCTGCTGATATTTCTCTGTTCTGTTGTGTTCTATTGGCCTTGATTGCTTGGCAGAGCTCATTGTTTGTTACAATCGAACTATTTTTTCCTCCACTCCTTGAAGTATACTAGAGTAGAGTTCAATACTGATTCTGGGATTATTAGGACTTAAGAGTGATGGTTTTCTGTTTTTTTTTTTTAATTGGGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTATTATTTTTTATTTATTTATAATTTCTCCCTTCCTCTATTATGCGTATGTTTTTTATGAATATGGGTTTGAATTTCTTGCAAAATGTGGACATGTGGTTTATTTAATTGGGTTGTACCCTTAATTATATAAGTGTCTATTTCATGTGCACAAGAGACTAATCCACAGGCCTTTTAAATAGTTAGTTGACAAATAATGATATATTGGTCTACAAGTTCCTCCCTCTCTTGCAGCGTGGGGCCTTATTGTGCGATCATTAGCTTTAGCAGATATTGCTTCCATATTTTTGGTTGCTTTCTATTTGGCTGGCAATCTATAAATCTTTTCCATGCGAGGCTATGAGTGGCGTAGTTCTTAAGATTGATCGTCTTGTTCGATGTGTTGCTTGCAGATTAAGGATGGATTTGCTGAGGGAAAGGATCTGATTGTGACTGTCATGTCTTCAATGGGAGAGGAGCAAATCTGCGCTCTCAAGGACATCGGCCCAAAATAGTTTTCCTTTGATAAAAATACACATGCAGCAAAATTTTAGAACGATATCCAGATCATAGTCTATAGTCATTTGACATGTTCGAGAAGCTTGGTCATCATCGACTGGAATATTCTCGATTAGTGCTTTCTTTCTCTCTGAGACTCTACTATTAATATTTATTTTTCTCCTGCTATTGCTGTTTGAATTAAGAGTTGTTTCTTGGCTAGTGTCACTTCAGTCATCAAATTATGTAAACTTTTTATAGCTGCTATGGTTGTTTTAAGAGCTGTAGGATAGAATCATGGTTTCTGAGGAAGTATAATATTTATTTACCAGAAGGTGTTTCTTTCTTAGTTCTATTGGCTCCTTGTTCAACTTTCTTTCTTCTAAAGCTTGGTTTCATGTTTTCTTGGTTTTAGTTAATATAGCCCATGTGTGTTATATTTGATTTGCCACTGTTTGTTTATAGCTTATACCAATAAATAAATGAGAGATTTGCCA CGTTCTCTGTAATCGTACGGTCAGAATATTTACACCAAAACATTTATTTTCGATTTTCTTTTTTGAAACCCTAGGATTCTCGCTCCCCTCTTTTGGTTACCTTTGTTCTTCGTTTTTCTCGTGTATATAAATTCGCTTCTTTTCTTCAACCCACTCCGTCGCAATTCTCTGAGCCTGTTTAGTTTTCCGTCATCACCCTCTCTTTGAACTCTCTTTCCCTACAGAACCATGTCGGACGAGGAGCACCACTTCGAATCCAAGGCCGACGCCGGAGCTTCCAAGACTTATCCCCAGCAGGCTGGAACCATCCGCAAGAATGGTTACATTGTCATCAAGGGCAGACCTTGCAAGGTTGTTGAGGTTTCAACCTCAAAGACTGGAAAGCACGGACATGCTAAATGTCACTTTGTCGGCATTGACATTTTCACTGCTAAAAAGCTTGAAGATATTGTCCCCTCTTCACACAACTGTGACGTTCCTCATGTCAGTCGCACTGATTACCAGCTCATTGATATCTCTGAGGATGGATTTATTAGCCTGCTGACAGACAGTGGTAACACCAAGGATGACCTGAGGCTTCCAACTGATGAGAGTCTGCTGTCCCAGATTAAGGATGGATTTGCTGAGGGAAAGGATCTGATTGTGACTGTCATGTCTTCAATGGGAGAGGAGCAAATCTGCGCTCTCAAGGACATCGGCCCAAAATAGTTTTCCTTTGATAAAAATACACATGCAGCAAAATTTTAGAACGATATCCAGATCATAGTCTATAGTCATTTGACATGTTCGAGAAGCTTGGTCATCATCGACTGGAATATTCTCGATTAGTGCTTTCTTTCTCTCTGAGACTCTACTATTAATATTTATTTTTCTCCTGCTATTGCTGTTTGAATTAAGAGTTGTTTCTTGGCTAGTGTCACTTCAGTCATCAAATTATGTAAACTTTTTATAGCTGCTATGGTTGTTTTAAGAGCTGTAGGATAGAATCATGGTTTCTGAGGAAGTATAATATTTATTTACCAGAAGGTGTTTCTTTCTTAGTTCTATTGGCTCCTTGTTCAACTTTCTTTCTTCTAAAGCTTGGTTTCATGTTTTCTTGGTTTTAGTTAATATAGCCCATGTGTGTTATATTTGATTTGCCACTGTTTGTTTATAGCTTATACCAATAAATAAATGAGAGATTTGCCA ATGTCGGACGAGGAGCACCACTTCGAATCCAAGGCCGACGCCGGAGCTTCCAAGACTTATCCCCAGCAGGCTGGAACCATCCGCAAGAATGGTTACATTGTCATCAAGGGCAGACCTTGCAAGGTTGTTGAGGTTTCAACCTCAAAGACTGGAAAGCACGGACATGCTAAATGTCACTTTGTCGGCATTGACATTTTCACTGCTAAAAAGCTTGAAGATATTGTCCCCTCTTCACACAACTGTGACGTTCCTCATGTCAGTCGCACTGATTACCAGCTCATTGATATCTCTGAGGATGGATTTATTAGCCTGCTGACAGACAGTGGTAACACCAAGGATGACCTGAGGCTTCCAACTGATGAGAGTCTGCTGTCCCAGATTAAGGATGGATTTGCTGAGGGAAAGGATCTGATTGTGACTGTCATGTCTTCAATGGGAGAGGAGCAAATCTGCGCTCTCAAGGACATCGGCCCAAAATAG MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTDESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK Homology
BLAST of CaUC05G103580 vs. NCBI nr
Match: XP_038893432.1 (eukaryotic translation initiation factor 5A-4 [Benincasa hispida]) HSP 1 Score: 325.1 bits (832), Expect = 3.4e-85 Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0
BLAST of CaUC05G103580 vs. NCBI nr
Match: XP_008446407.1 (PREDICTED: eukaryotic translation initiation factor 5A-2 [Cucumis melo] >KAA0034452.1 eukaryotic translation initiation factor 5A-2 [Cucumis melo var. makuwa] >TYK17682.1 eukaryotic translation initiation factor 5A-2 [Cucumis melo var. makuwa]) HSP 1 Score: 320.9 bits (821), Expect = 6.4e-84 Identity = 156/159 (98.11%), Postives = 159/159 (100.00%), Query Frame = 0
BLAST of CaUC05G103580 vs. NCBI nr
Match: XP_022151244.1 (eukaryotic translation initiation factor 5A-4-like [Momordica charantia]) HSP 1 Score: 319.3 bits (817), Expect = 1.9e-83 Identity = 156/159 (98.11%), Postives = 157/159 (98.74%), Query Frame = 0
BLAST of CaUC05G103580 vs. NCBI nr
Match: XP_004135157.1 (eukaryotic translation initiation factor 5A-2 [Cucumis sativus] >KGN51957.1 hypothetical protein Csa_009020 [Cucumis sativus]) HSP 1 Score: 319.3 bits (817), Expect = 1.9e-83 Identity = 155/159 (97.48%), Postives = 157/159 (98.74%), Query Frame = 0
BLAST of CaUC05G103580 vs. NCBI nr
Match: XP_022944889.1 (eukaryotic translation initiation factor 5A-4-like [Cucurbita moschata] >XP_022967964.1 eukaryotic translation initiation factor 5A-4-like [Cucurbita maxima] >KAG6574057.1 Eukaryotic translation initiation factor 5A-4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 318.5 bits (815), Expect = 3.2e-83 Identity = 155/159 (97.48%), Postives = 158/159 (99.37%), Query Frame = 0
BLAST of CaUC05G103580 vs. ExPASy Swiss-Prot
Match: P24922 (Eukaryotic translation initiation factor 5A-2 OS=Nicotiana plumbaginifolia OX=4092 GN=EIF-5A2 PE=2 SV=1) HSP 1 Score: 305.4 bits (781), Expect = 3.6e-82 Identity = 145/159 (91.19%), Postives = 156/159 (98.11%), Query Frame = 0
BLAST of CaUC05G103580 vs. ExPASy Swiss-Prot
Match: Q9AXJ4 (Eukaryotic translation initiation factor 5A OS=Manihot esculenta OX=3983 PE=2 SV=2) HSP 1 Score: 305.4 bits (781), Expect = 3.6e-82 Identity = 144/159 (90.57%), Postives = 156/159 (98.11%), Query Frame = 0
BLAST of CaUC05G103580 vs. ExPASy Swiss-Prot
Match: P56336 (Eukaryotic translation initiation factor 5A-4 OS=Solanum tuberosum OX=4113 GN=EIF5A4 PE=2 SV=1) HSP 1 Score: 304.7 bits (779), Expect = 6.2e-82 Identity = 147/159 (92.45%), Postives = 155/159 (97.48%), Query Frame = 0
BLAST of CaUC05G103580 vs. ExPASy Swiss-Prot
Match: Q9AXQ4 (Eukaryotic translation initiation factor 5A-3 OS=Solanum lycopersicum OX=4081 PE=2 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 1.1e-81 Identity = 147/159 (92.45%), Postives = 154/159 (96.86%), Query Frame = 0
BLAST of CaUC05G103580 vs. ExPASy Swiss-Prot
Match: P56335 (Eukaryotic translation initiation factor 5A-3 OS=Solanum tuberosum OX=4113 GN=EIF5A3 PE=2 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 9.0e-81 Identity = 144/159 (90.57%), Postives = 152/159 (95.60%), Query Frame = 0
BLAST of CaUC05G103580 vs. ExPASy TrEMBL
Match: A0A5D3D1G5 (Eukaryotic translation initiation factor 5A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00070 PE=3 SV=1) HSP 1 Score: 320.9 bits (821), Expect = 3.1e-84 Identity = 156/159 (98.11%), Postives = 159/159 (100.00%), Query Frame = 0
BLAST of CaUC05G103580 vs. ExPASy TrEMBL
Match: A0A1S3BFT8 (Eukaryotic translation initiation factor 5A OS=Cucumis melo OX=3656 GN=LOC103489162 PE=3 SV=1) HSP 1 Score: 320.9 bits (821), Expect = 3.1e-84 Identity = 156/159 (98.11%), Postives = 159/159 (100.00%), Query Frame = 0
BLAST of CaUC05G103580 vs. ExPASy TrEMBL
Match: A0A0A0KU59 (Eukaryotic translation initiation factor 5A OS=Cucumis sativus OX=3659 GN=Csa_5G606480 PE=3 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 9.0e-84 Identity = 155/159 (97.48%), Postives = 157/159 (98.74%), Query Frame = 0
BLAST of CaUC05G103580 vs. ExPASy TrEMBL
Match: A0A6J1DCF3 (Eukaryotic translation initiation factor 5A OS=Momordica charantia OX=3673 GN=LOC111019214 PE=3 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 9.0e-84 Identity = 156/159 (98.11%), Postives = 157/159 (98.74%), Query Frame = 0
BLAST of CaUC05G103580 vs. ExPASy TrEMBL
Match: A0A6J1HY83 (Eukaryotic translation initiation factor 5A OS=Cucurbita maxima OX=3661 GN=LOC111467343 PE=3 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 1.5e-83 Identity = 155/159 (97.48%), Postives = 158/159 (99.37%), Query Frame = 0
BLAST of CaUC05G103580 vs. TAIR 10
Match: AT1G13950.1 (eukaryotic elongation factor 5A-1 ) HSP 1 Score: 285.4 bits (729), Expect = 2.8e-77 Identity = 137/159 (86.16%), Postives = 151/159 (94.97%), Query Frame = 0
BLAST of CaUC05G103580 vs. TAIR 10
Match: AT1G69410.1 (eukaryotic elongation factor 5A-3 ) HSP 1 Score: 285.0 bits (728), Expect = 3.6e-77 Identity = 133/159 (83.65%), Postives = 153/159 (96.23%), Query Frame = 0
BLAST of CaUC05G103580 vs. TAIR 10
Match: AT1G26630.1 (Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein ) HSP 1 Score: 266.9 bits (681), Expect = 1.0e-71 Identity = 125/157 (79.62%), Postives = 145/157 (92.36%), Query Frame = 0
BLAST of CaUC05G103580 vs. TAIR 10
Match: AT1G26630.2 (Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein ) HSP 1 Score: 221.5 bits (563), Expect = 4.9e-58 Identity = 104/127 (81.89%), Postives = 117/127 (92.13%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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