CaUC05G102930 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC05G102930
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionProtein of unknown function (DUF1262)
LocationCiama_Chr05: 33772572 .. 33773405 (-)
RNA-Seq ExpressionCaUC05G102930
SyntenyCaUC05G102930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGATGTATAAAATTAGATGAAATTAAAGCATTAAAATGAATAAATAAAGTATAGATGAGATGTATGTGACGAGGCCTCTCTCTGTGTATAGGGACTCCTCTTCGCCTGAGGCGGAGGGTCCAAATACAGGGGTTTTGGTGATGGAAGATGAAGCTTCAGAGTCGAAATGGTTTTTTGGATTGCTTAAGGATACGTGTGTGAAGGTACCGCCATTTCCTCAAAACAAGCTACTGGAGCTTCGATATTTGAAAGGTACTGCTGCAGATAGACGAAGGCACTACCATCGCACCGATTACTTTTACGCAATGTTAATTCCAGTTCTGAATCAGCCTTCCGATTCCAACCAATATTACGTCATCAATTCCCGTGGCAAAACTAAAGGGTATTCCTTTTATTCCTTTTTCATCTCCATTCTCCCCTTGCCTAACCCCAAATTTGGCTCAACTTTTCACTTATTCCTTCTATTTTACGCCTCTCAAATTTCTAATTTTTTATTTCATCATTGGGTCCATATTTACATCCTAAATTATTATAAATTAAAAAATATATCAAATTTACCGTCTATGATACAAAGTCTATCATATTTATTATTTAAATTTTTTATATTTTGTAAATAGTTTAATTTTATTTTGCCATATTTGAAAATAACTCTATTTAGAATTAATTCAATTGTAATTATTATATTTTCATTAAATCTAAAATCTTATCTCTAATGCTATTTGATTTTTTTTTTTTTAATATTATGATTTGTTTTCAAATATTGCAACATGAGTCAAAATATTTATCAATATAAAAAAAAATTGTTGTCTATTAGTCATAGATCGCTATAG

mRNA sequence

ATGTTGATTATAGATGAGATGTATGTGACGAGGCCTCTCTCTGTGTATAGGGACTCCTCTTCGCCTGAGGCGGAGGGTCCAAATACAGGGGTTTTGGTGATGGAAGATGAAGCTTCAGAGTCGAAATGGTTTTTTGGATTGCTTAAGGATACGTGTGTGAAGGTACCGCCATTTCCTCAAAACAAGCTACTGGAGCTTCGATATTTGAAAGGTACTGCTGCAGATAGACGAAGGCACTACCATCGCACCGATTACTTTTACGCAATGTTAATTCCAGTTCTGAATCAGCCTTCCGATTCCAACCAATATTACGTCATCAATTCCCGTGGCAAAACTAAAGGATCGCTATAG

Coding sequence (CDS)

ATGTTGATTATAGATGAGATGTATGTGACGAGGCCTCTCTCTGTGTATAGGGACTCCTCTTCGCCTGAGGCGGAGGGTCCAAATACAGGGGTTTTGGTGATGGAAGATGAAGCTTCAGAGTCGAAATGGTTTTTTGGATTGCTTAAGGATACGTGTGTGAAGGTACCGCCATTTCCTCAAAACAAGCTACTGGAGCTTCGATATTTGAAAGGTACTGCTGCAGATAGACGAAGGCACTACCATCGCACCGATTACTTTTACGCAATGTTAATTCCAGTTCTGAATCAGCCTTCCGATTCCAACCAATATTACGTCATCAATTCCCGTGGCAAAACTAAAGGATCGCTATAG

Protein sequence

MLIIDEMYVTRPLSVYRDSSSPEAEGPNTGVLVMEDEASESKWFFGLLKDTCVKVPPFPQNKLLELRYLKGTAADRRRHYHRTDYFYAMLIPVLNQPSDSNQYYVINSRGKTKGSL
Homology
BLAST of CaUC05G102930 vs. NCBI nr
Match: XP_038893050.1 (uncharacterized protein LOC120081938 [Benincasa hispida])

HSP 1 Score: 178.7 bits (452), Expect = 2.9e-41
Identity = 89/115 (77.39%), Postives = 97/115 (84.35%), Query Frame = 0

Query: 7   MYVTRPLSVYRDSSSP------EAEGPNTGVLVMEDEASESKWFFGLLKDTCVKVPPFPQ 66
           MYVTRPLS+YRD+SS       E EGPNTGVLV+EDEASE +WFFGLLKDT V VPPFPQ
Sbjct: 1   MYVTRPLSLYRDTSSSSSSSALEPEGPNTGVLVIEDEASELRWFFGLLKDTSVAVPPFPQ 60

Query: 67  NKLLELRYLKGTAADRRRHYHR-TDYFYAMLIPVLNQPSDSNQYYVINSRGKTKG 115
           NKLLELRYLK +AA  RRH+H  TDYFYA LIPVLNQP +SNQYY+INSRGKTKG
Sbjct: 61  NKLLELRYLKHSAAHNRRHWHHLTDYFYAWLIPVLNQPPNSNQYYIINSRGKTKG 115

BLAST of CaUC05G102930 vs. NCBI nr
Match: XP_011655745.2 (uncharacterized protein LOC105435580 [Cucumis sativus])

HSP 1 Score: 157.1 bits (396), Expect = 8.9e-35
Identity = 78/115 (67.83%), Postives = 88/115 (76.52%), Query Frame = 0

Query: 7   MYVTRPLSVYRD-------SSSPEAEGPNTGVLVMEDEASESKWFFGLLKDTCVKVPPFP 66
           MYVTRPLS+YR        S+S   EGPNTGVLV+EDE SE +WFFGL+KD  V+ PPFP
Sbjct: 24  MYVTRPLSLYRSDQCSASASASVLVEGPNTGVLVIEDEGSERRWFFGLVKDESVEEPPFP 83

Query: 67  QNKLLELRYLKGTAADRRRHYHRTDYFYAMLIPVLNQPSDSNQYYVINSRGKTKG 115
           QNKLLELRY K  A  R R +  TDYFY MLIPVLNQP +SNQYYVI+SRGK+KG
Sbjct: 84  QNKLLELRYKKTAARQRHRRHPYTDYFYVMLIPVLNQPPNSNQYYVIDSRGKSKG 138

BLAST of CaUC05G102930 vs. NCBI nr
Match: KGN52021.1 (hypothetical protein Csa_009154 [Cucumis sativus])

HSP 1 Score: 157.1 bits (396), Expect = 8.9e-35
Identity = 78/115 (67.83%), Postives = 88/115 (76.52%), Query Frame = 0

Query: 7   MYVTRPLSVYRD-------SSSPEAEGPNTGVLVMEDEASESKWFFGLLKDTCVKVPPFP 66
           MYVTRPLS+YR        S+S   EGPNTGVLV+EDE SE +WFFGL+KD  V+ PPFP
Sbjct: 1   MYVTRPLSLYRSDQCSASASASVLVEGPNTGVLVIEDEGSERRWFFGLVKDESVEEPPFP 60

Query: 67  QNKLLELRYLKGTAADRRRHYHRTDYFYAMLIPVLNQPSDSNQYYVINSRGKTKG 115
           QNKLLELRY K  A  R R +  TDYFY MLIPVLNQP +SNQYYVI+SRGK+KG
Sbjct: 61  QNKLLELRYKKTAARQRHRRHPYTDYFYVMLIPVLNQPPNSNQYYVIDSRGKSKG 115

BLAST of CaUC05G102930 vs. NCBI nr
Match: KAA0034506.1 (hypothetical protein E6C27_scaffold65G005210 [Cucumis melo var. makuwa] >TYK09060.1 hypothetical protein E5676_scaffold475G00490 [Cucumis melo var. makuwa])

HSP 1 Score: 152.9 bits (385), Expect = 1.7e-33
Identity = 80/112 (71.43%), Postives = 87/112 (77.68%), Query Frame = 0

Query: 7   MYVTRPLSVYRDSSSPEAEGPNTGVLVMEDEASESKWFFGLLKDTCVKVPPFPQNKLLEL 66
           MYVTRPLS    S+S   EGPNTGVL +EDE SE +WFFGLLKD  V+ PPFPQNKLLEL
Sbjct: 1   MYVTRPLSA---SASVPVEGPNTGVLAIEDEGSERRWFFGLLKDERVEEPPFPQNKLLEL 60

Query: 67  RYLKGTAA--DRRRHYHR--TDYFYAMLIPVLNQPSDSNQYYVINSRGKTKG 115
           RY K T A   R+RH     TDYFYAMLIPVLNQP +SNQYYVINSRGK+KG
Sbjct: 61  RYTKPTGARVQRQRHLRHLYTDYFYAMLIPVLNQPPNSNQYYVINSRGKSKG 109

BLAST of CaUC05G102930 vs. NCBI nr
Match: XP_008446517.1 (PREDICTED: uncharacterized protein LOC103489225 [Cucumis melo])

HSP 1 Score: 152.9 bits (385), Expect = 1.7e-33
Identity = 80/112 (71.43%), Postives = 87/112 (77.68%), Query Frame = 0

Query: 7   MYVTRPLSVYRDSSSPEAEGPNTGVLVMEDEASESKWFFGLLKDTCVKVPPFPQNKLLEL 66
           MYVTRPLS    S+S   EGPNTGVL +EDE SE +WFFGLLKD  V+ PPFPQNKLLEL
Sbjct: 1   MYVTRPLSA---SASVPVEGPNTGVLAIEDEGSERRWFFGLLKDERVEEPPFPQNKLLEL 60

Query: 67  RYLKGTAA--DRRRHYHR--TDYFYAMLIPVLNQPSDSNQYYVINSRGKTKG 115
           RY K T A   R+RH     TDYFYAMLIPVLNQP +SNQYYVINSRGK+KG
Sbjct: 61  RYTKPTGARVQRQRHLRHLYTDYFYAMLIPVLNQPPNSNQYYVINSRGKSKG 109

BLAST of CaUC05G102930 vs. ExPASy TrEMBL
Match: A0A0A0KWB8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608090 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 4.3e-35
Identity = 78/115 (67.83%), Postives = 88/115 (76.52%), Query Frame = 0

Query: 7   MYVTRPLSVYRD-------SSSPEAEGPNTGVLVMEDEASESKWFFGLLKDTCVKVPPFP 66
           MYVTRPLS+YR        S+S   EGPNTGVLV+EDE SE +WFFGL+KD  V+ PPFP
Sbjct: 1   MYVTRPLSLYRSDQCSASASASVLVEGPNTGVLVIEDEGSERRWFFGLVKDESVEEPPFP 60

Query: 67  QNKLLELRYLKGTAADRRRHYHRTDYFYAMLIPVLNQPSDSNQYYVINSRGKTKG 115
           QNKLLELRY K  A  R R +  TDYFY MLIPVLNQP +SNQYYVI+SRGK+KG
Sbjct: 61  QNKLLELRYKKTAARQRHRRHPYTDYFYVMLIPVLNQPPNSNQYYVIDSRGKSKG 115

BLAST of CaUC05G102930 vs. ExPASy TrEMBL
Match: A0A5D3CCK6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00490 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 8.1e-34
Identity = 80/112 (71.43%), Postives = 87/112 (77.68%), Query Frame = 0

Query: 7   MYVTRPLSVYRDSSSPEAEGPNTGVLVMEDEASESKWFFGLLKDTCVKVPPFPQNKLLEL 66
           MYVTRPLS    S+S   EGPNTGVL +EDE SE +WFFGLLKD  V+ PPFPQNKLLEL
Sbjct: 1   MYVTRPLSA---SASVPVEGPNTGVLAIEDEGSERRWFFGLLKDERVEEPPFPQNKLLEL 60

Query: 67  RYLKGTAA--DRRRHYHR--TDYFYAMLIPVLNQPSDSNQYYVINSRGKTKG 115
           RY K T A   R+RH     TDYFYAMLIPVLNQP +SNQYYVINSRGK+KG
Sbjct: 61  RYTKPTGARVQRQRHLRHLYTDYFYAMLIPVLNQPPNSNQYYVINSRGKSKG 109

BLAST of CaUC05G102930 vs. ExPASy TrEMBL
Match: A0A1S3BF83 (uncharacterized protein LOC103489225 OS=Cucumis melo OX=3656 GN=LOC103489225 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 8.1e-34
Identity = 80/112 (71.43%), Postives = 87/112 (77.68%), Query Frame = 0

Query: 7   MYVTRPLSVYRDSSSPEAEGPNTGVLVMEDEASESKWFFGLLKDTCVKVPPFPQNKLLEL 66
           MYVTRPLS    S+S   EGPNTGVL +EDE SE +WFFGLLKD  V+ PPFPQNKLLEL
Sbjct: 1   MYVTRPLSA---SASVPVEGPNTGVLAIEDEGSERRWFFGLLKDERVEEPPFPQNKLLEL 60

Query: 67  RYLKGTAA--DRRRHYHR--TDYFYAMLIPVLNQPSDSNQYYVINSRGKTKG 115
           RY K T A   R+RH     TDYFYAMLIPVLNQP +SNQYYVINSRGK+KG
Sbjct: 61  RYTKPTGARVQRQRHLRHLYTDYFYAMLIPVLNQPPNSNQYYVINSRGKSKG 109

BLAST of CaUC05G102930 vs. ExPASy TrEMBL
Match: A0A6J1D7B1 (uncharacterized protein LOC111017584 OS=Momordica charantia OX=3673 GN=LOC111017584 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.4e-30
Identity = 72/116 (62.07%), Postives = 85/116 (73.28%), Query Frame = 0

Query: 7   MYVTRPLSVYRDSSSPEA--------EGPNTGVLVMEDEASESKWFFGLLKDTCVKVPPF 66
           MYVTRPLS+YR+  +  A        EGPNTGVLV+EDEA+ES+W FGLLK   VK PPF
Sbjct: 1   MYVTRPLSMYRNEGATSAAPVPAALVEGPNTGVLVIEDEAAESRWLFGLLKRKSVKAPPF 60

Query: 67  PQNKLLELRYLKGTAADRRRHYHRTDYFYAMLIPVLNQPSDSNQYYVINSRGKTKG 115
           PQNK++ELRY      +   H H TDYFYA+LIPV+N+P  SN+YYVI SRGKTKG
Sbjct: 61  PQNKIMELRY----TINSGEHQH-TDYFYALLIPVINRPLSSNKYYVIKSRGKTKG 111

BLAST of CaUC05G102930 vs. ExPASy TrEMBL
Match: A0A0A0KUD7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608100 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 4.6e-29
Identity = 74/114 (64.91%), Postives = 82/114 (71.93%), Query Frame = 0

Query: 7   MYVTRPLSVYRDSSSPEA------EGPNTGVLVMEDEASESKWFFGLLKDTCVKVPPFPQ 66
           MYVTRPLS+YRDSSS          GPNTGVLV+EDE SE +WFFGLLK   VKVPPFPQ
Sbjct: 1   MYVTRPLSLYRDSSSGSGSDSGLPSGPNTGVLVIEDEGSERRWFFGLLKAKSVKVPPFPQ 60

Query: 67  NKLLELRYLKGTAADRRRHYHRTDYFYAMLIPVLNQPSDSNQYYVINSRGKTKG 115
           NKL++L Y KG  +D       TD F AMLIPVLNQPS+SNQYYVI+S    KG
Sbjct: 61  NKLMKLWYSKGIHSD-------TDDFEAMLIPVLNQPSNSNQYYVISSDVIEKG 107

BLAST of CaUC05G102930 vs. TAIR 10
Match: AT1G13520.1 (Protein of unknown function (DUF1262) )

HSP 1 Score: 90.1 bits (222), Expect = 1.2e-18
Identity = 53/112 (47.32%), Postives = 67/112 (59.82%), Query Frame = 0

Query: 7   MYVTRPLSVYRDSSSPEA----EGPNTGVLVMEDEASESKWFFGLLKDTCVKVPPFPQNK 66
           MYVTR LS Y+ +SS       EGPN+GVLV++DE S+    FG   D  +K  PFPQN 
Sbjct: 1   MYVTRHLSEYQRNSSDLTRSLPEGPNSGVLVIQDEESKPTCCFGNCYDGELKGLPFPQNA 60

Query: 67  LLELRYLKGTAADRRRHYHRTDYFYAMLIPVLNQPSDSNQYYVINSRGKTKG 115
            L + Y  GT  DRR ++ +      + IPVL+QP  SN+YYVI  RGK  G
Sbjct: 61  KLTVTYRTGTGNDRRSYHDQ-----VLFIPVLDQPYYSNRYYVIKRRGKQSG 107

BLAST of CaUC05G102930 vs. TAIR 10
Match: AT1G13480.1 (Protein of unknown function (DUF1262) )

HSP 1 Score: 76.6 bits (187), Expect = 1.4e-14
Identity = 45/112 (40.18%), Postives = 59/112 (52.68%), Query Frame = 0

Query: 7   MYVTRPLSVYRDSSSP----EAEGPNTGVLVMEDEASESKWFFGLLKDTCVKVPPFPQNK 66
           MYVTR LS Y+   S       EGPN+G++V++DE S++   FG   +  +K  PFPQN 
Sbjct: 1   MYVTRRLSEYQKKPSELKLLPPEGPNSGIMVIQDEESQATCCFGSCYEGRLKGLPFPQNV 60

Query: 67  LLELRYLKGTAADRRRHYHRTDYFYAMLIPVLNQPSDSNQYYVINSRGKTKG 115
            L   Y  G    +  H         + IPVL+QP  SN YYV+  RGK  G
Sbjct: 61  KLNAAYTSGGGEHQTTHLTP-----VVFIPVLDQPLSSNLYYVLQRRGKHTG 107

BLAST of CaUC05G102930 vs. TAIR 10
Match: AT1G61600.1 (Protein of unknown function (DUF1262) )

HSP 1 Score: 72.8 bits (177), Expect = 2.1e-13
Identity = 43/116 (37.07%), Postives = 66/116 (56.90%), Query Frame = 0

Query: 7   MYVTRPLSVYR----DSSSPEAEGPNTGVLVMEDEASESK--WFFGLLKDTCVKVPPFPQ 66
           MYVTR LS +R      S    EGP +GVLV+ DE +E++  + FG+   T ++  P PQ
Sbjct: 1   MYVTRTLSQFRKYQKTLSEESPEGPFSGVLVITDEEAETEDTFCFGMCTRTKIEKLPLPQ 60

Query: 67  NKLLELRYLKGTAADRRRHYHRTDYFYAMLIPVLNQPSDSNQYYVINSRGKTKGSL 117
           +K+L + +L  +          T     + IP L+QP  SN+YYV+++RG+ KG +
Sbjct: 61  DKILSVVHLDSSG------NRETSVKKVLFIPALDQPLSSNRYYVVHARGRHKGKV 110

BLAST of CaUC05G102930 vs. TAIR 10
Match: AT1G13550.1 (Protein of unknown function (DUF1262) )

HSP 1 Score: 72.8 bits (177), Expect = 2.1e-13
Identity = 46/108 (42.59%), Postives = 58/108 (53.70%), Query Frame = 0

Query: 7   MYVTRPLSVYRDSSS----PEAEGPNTGVLVMEDEASESKWFFGLLKDTCVKVPPFPQNK 66
           MYVTR LS YR + S    P  EGPN+GVLV++DE S +   FGL  +  ++  PFPQN 
Sbjct: 1   MYVTRRLSEYRKNPSELKKPPPEGPNSGVLVIQDEESLTTCCFGLCNEIFLRGLPFPQNA 60

Query: 67  LLELRYLKGTAADRRRHYHRTDYFYAMLIPVLNQPSDSNQYYVINSRG 111
            L +R   G    +    HR      + IPVL QP  SN+YY     G
Sbjct: 61  ALTVRRDDG---GQNNTVHRDP---VVFIPVLGQPLSSNRYYTYERCG 102

BLAST of CaUC05G102930 vs. TAIR 10
Match: AT1G13530.1 (Protein of unknown function (DUF1262) )

HSP 1 Score: 72.0 bits (175), Expect = 3.5e-13
Identity = 46/112 (41.07%), Postives = 59/112 (52.68%), Query Frame = 0

Query: 7   MYVTRPLSVYRDSSSP----EAEGPNTGVLVMEDEASESKWFFGLLKDTCVKVPPFPQNK 66
           MYVT+ LS Y+ + S       EGPN+GVLV++DE S+    FG      +   PFPQN 
Sbjct: 1   MYVTKRLSEYQRNPSELTFLPTEGPNSGVLVIQDEESQPTCCFGKCFGCDLNGLPFPQNT 60

Query: 67  LLELRYLKGTAADRRRHYHRTDYFYAMLIPVLNQPSDSNQYYVINSRGKTKG 115
            + ++Y  G   DR        +     IPVL+QP  SN YYVI  RGK  G
Sbjct: 61  RVTVKYQIGHGDDRIVLLDSVAF-----IPVLHQPPSSNLYYVIRRRGKHAG 107

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038893050.12.9e-4177.39uncharacterized protein LOC120081938 [Benincasa hispida][more]
XP_011655745.28.9e-3567.83uncharacterized protein LOC105435580 [Cucumis sativus][more]
KGN52021.18.9e-3567.83hypothetical protein Csa_009154 [Cucumis sativus][more]
KAA0034506.11.7e-3371.43hypothetical protein E6C27_scaffold65G005210 [Cucumis melo var. makuwa] >TYK0906... [more]
XP_008446517.11.7e-3371.43PREDICTED: uncharacterized protein LOC103489225 [Cucumis melo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KWB84.3e-3567.83Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608090 PE=4 SV=1[more]
A0A5D3CCK68.1e-3471.43Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3BF838.1e-3471.43uncharacterized protein LOC103489225 OS=Cucumis melo OX=3656 GN=LOC103489225 PE=... [more]
A0A6J1D7B11.4e-3062.07uncharacterized protein LOC111017584 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A0A0KUD74.6e-2964.91Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608100 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G13520.11.2e-1847.32Protein of unknown function (DUF1262) [more]
AT1G13480.11.4e-1440.18Protein of unknown function (DUF1262) [more]
AT1G61600.12.1e-1337.07Protein of unknown function (DUF1262) [more]
AT1G13550.12.1e-1342.59Protein of unknown function (DUF1262) [more]
AT1G13530.13.5e-1341.07Protein of unknown function (DUF1262) [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010683Protein of unknown function DUF1262PFAMPF06880DUF1262coord: 25..115
e-value: 4.1E-22
score: 78.4
NoneNo IPR availablePANTHERPTHR31050OS08G0413200 PROTEINcoord: 7..115
NoneNo IPR availablePANTHERPTHR31050:SF3OS08G0413200 PROTEINcoord: 7..115

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC05G102930.1CaUC05G102930.1mRNA