Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGTCTAAAACCCCACCCATCCTCCAAAAGCTTTCAAATTTCCTCAAACTTTCCATCTTTATCGCCAAAATGAAAACACCCATCATTTCAAACCTCCTTTTCTTCAAGAAATCATTCAGGTCAAACAACTTCCAGCTCCTTCCGCACTATAATCATGGGTTTCTTCCAGACTTCCAATTCTCCCCTTCCACCACTCCTCTGTTTCGTTTTTACAAAGGCCGCCGCCGCCTCCGCCTCCGCCTCCGCCGCCACGATGTCTATTCGGTGCTTTTTCCTTGCAGATGTATTGGTAGTTCTGGAGCTGAAAACGAAGAAGATGGAGATTACGTCGAAGCTTTTCCGGCCATTGAAGGGCGGTTTCCGGACTCGTTGGATTGGAGCGATGATGATGATTCAATTGATCGGAGGGCTGAACTTTTCATTCAGAAATTCTACGCGGATATGAAAATGGAGAGGCTAGCATCGATTTGA
mRNA sequence
ATGCAGTCTAAAACCCCACCCATCCTCCAAAAGCTTTCAAATTTCCTCAAACTTTCCATCTTTATCGCCAAAATGAAAACACCCATCATTTCAAACCTCCTTTTCTTCAAGAAATCATTCAGGTCAAACAACTTCCAGCTCCTTCCGCACTATAATCATGGGTTTCTTCCAGACTTCCAATTCTCCCCTTCCACCACTCCTCTGTTTCGTTTTTACAAAGGCCGCCGCCGCCTCCGCCTCCGCCTCCGCCGCCACGATGTCTATTCGGTGCTTTTTCCTTGCAGATGTATTGGTAGTTCTGGAGCTGAAAACGAAGAAGATGGAGATTACGTCGAAGCTTTTCCGGCCATTGAAGGGCGGTTTCCGGACTCGTTGGATTGGAGCGATGATGATGATTCAATTGATCGGAGGGCTGAACTTTTCATTCAGAAATTCTACGCGGATATGAAAATGGAGAGGCTAGCATCGATTTGA
Coding sequence (CDS)
ATGCAGTCTAAAACCCCACCCATCCTCCAAAAGCTTTCAAATTTCCTCAAACTTTCCATCTTTATCGCCAAAATGAAAACACCCATCATTTCAAACCTCCTTTTCTTCAAGAAATCATTCAGGTCAAACAACTTCCAGCTCCTTCCGCACTATAATCATGGGTTTCTTCCAGACTTCCAATTCTCCCCTTCCACCACTCCTCTGTTTCGTTTTTACAAAGGCCGCCGCCGCCTCCGCCTCCGCCTCCGCCGCCACGATGTCTATTCGGTGCTTTTTCCTTGCAGATGTATTGGTAGTTCTGGAGCTGAAAACGAAGAAGATGGAGATTACGTCGAAGCTTTTCCGGCCATTGAAGGGCGGTTTCCGGACTCGTTGGATTGGAGCGATGATGATGATTCAATTGATCGGAGGGCTGAACTTTTCATTCAGAAATTCTACGCGGATATGAAAATGGAGAGGCTAGCATCGATTTGA
Protein sequence
MQSKTPPILQKLSNFLKLSIFIAKMKTPIISNLLFFKKSFRSNNFQLLPHYNHGFLPDFQFSPSTTPLFRFYKGRRRLRLRLRRHDVYSVLFPCRCIGSSGAENEEDGDYVEAFPAIEGRFPDSLDWSDDDDSIDRRAELFIQKFYADMKMERLASI
Homology
BLAST of CaUC05G102220 vs. NCBI nr
Match:
XP_038893176.1 (uncharacterized protein LOC120082033 [Benincasa hispida])
HSP 1 Score: 221.5 bits (563), Expect = 5.2e-54
Identity = 117/156 (75.00%), Postives = 128/156 (82.05%), Query Frame = 0
Query: 1 MQSKTPPILQKLSNFLKLSIFIAKMKTPIISNLLFFKKSFRSNNFQLLPHYNHGFLPDFQ 60
MQSK PPI QKLS+FLK+SIFIAKMK PII LLF KKS R N+F+L HYN+GF+ DFQ
Sbjct: 1 MQSKRPPIFQKLSDFLKVSIFIAKMKRPIIPKLLFLKKSSRRNSFELHHHYNYGFVRDFQ 60
Query: 61 FSPSTTPLFRFYKGRRRLRLRLRRHDVYSVLFPCRCIG-SSGAENEEDGDYVEAFPAIEG 120
FSPSTTPLFRFY+GRR L R DVYSVLFPCRCIG SSGAE EEDGDY ++E
Sbjct: 61 FSPSTTPLFRFYRGRR----GLCRRDVYSVLFPCRCIGSSSGAEKEEDGDY-----SVEE 120
Query: 121 RFPDSLDWSDDDDSIDRRAELFIQKFYADMKMERLA 156
P+SLDWSDDDDSIDRRAE+FIQKFYADMKMERLA
Sbjct: 121 ALPESLDWSDDDDSIDRRAEIFIQKFYADMKMERLA 147
BLAST of CaUC05G102220 vs. NCBI nr
Match:
XP_004135396.1 (uncharacterized protein LOC101211232 [Cucumis sativus])
HSP 1 Score: 206.1 bits (523), Expect = 2.3e-49
Identity = 110/159 (69.18%), Postives = 123/159 (77.36%), Query Frame = 0
Query: 1 MQSKTPPILQKLSNFLKLSIFIAKMKTPIISNLLFFKKSFRSNNFQLLPHYNHGFLPDFQ 60
MQSK PPI QKLSNFL++SIF+AKMK PII LLF KKS R +F+LL HYN+GF+ DF+
Sbjct: 1 MQSKRPPIFQKLSNFLRVSIFMAKMKRPIIPKLLFLKKSSRMKSFELLHHYNYGFVRDFE 60
Query: 61 FSPSTTPLFRFYKGRRRLRLRLRRHDVYSVLFPCRCI--GSSGAENEEDGDYVEAFPAIE 120
FSPSTTPLFRF R R LRR+DV SVLFPCRCI GS G + E DGDY +E
Sbjct: 61 FSPSTTPLFRF--NNRGGRRGLRRYDVCSVLFPCRCIVGGSGGEKKEGDGDY-----GVE 120
Query: 121 GRFPDSLDWSDDDDSIDRRAELFIQKFYADMKMERLASI 158
FP+SLDWSDDDDSIDRRAE+FIQKFY DMKMERL SI
Sbjct: 121 EAFPESLDWSDDDDSIDRRAEIFIQKFYEDMKMERLTSI 152
BLAST of CaUC05G102220 vs. NCBI nr
Match:
KAA0034569.1 (uncharacterized protein E6C27_scaffold65G005850 [Cucumis melo var. makuwa] >TYK09121.1 uncharacterized protein E5676_scaffold475G001120 [Cucumis melo var. makuwa])
HSP 1 Score: 200.7 bits (509), Expect = 9.5e-48
Identity = 114/161 (70.81%), Postives = 127/161 (78.88%), Query Frame = 0
Query: 1 MQSKTPPILQKLSNFLKLSIFIAKMKTPIISNLLFFKKSFRSNNFQLLPHYNHG-FLPDF 60
MQSK PPI QKLS+FLK+SIFIAKMK P+I LLF KKS + NF+LL HYN+G F+ DF
Sbjct: 1 MQSKRPPIFQKLSSFLKVSIFIAKMKRPLIPKLLFLKKSSGTKNFELLQHYNYGSFVRDF 60
Query: 61 QFSPSTTPLFRFYKGRRRLRLRLRRHDVYSVLFPCRC-IGSSGAE-NEEDGDYVEAFPAI 120
QFSPSTTPLFRF R R LRR+DV SVLFPCRC IG+SG E E+DGDY +
Sbjct: 61 QFSPSTTPLFRF--NNRGSRRGLRRYDVCSVLFPCRCIIGASGGEKKEKDGDY-----DV 120
Query: 121 EGRFPDSLDWSD-DDDSIDRRAELFIQKFYADMKMERLASI 158
E FP+SLDWSD DDDSIDRRAE+FIQKFYADMKMERLASI
Sbjct: 121 EEAFPESLDWSDNDDDSIDRRAEIFIQKFYADMKMERLASI 154
BLAST of CaUC05G102220 vs. NCBI nr
Match:
KAE8648793.1 (hypothetical protein Csa_009258 [Cucumis sativus])
HSP 1 Score: 179.1 bits (453), Expect = 3.0e-41
Identity = 96/142 (67.61%), Postives = 108/142 (76.06%), Query Frame = 0
Query: 18 LSIFIAKMKTPIISNLLFFKKSFRSNNFQLLPHYNHGFLPDFQFSPSTTPLFRFYKGRRR 77
+SIF+AKMK PII LLF KKS R +F+LL HYN+GF+ DF+FSPSTTPLFRF R
Sbjct: 16 VSIFMAKMKRPIIPKLLFLKKSSRMKSFELLHHYNYGFVRDFEFSPSTTPLFRF--NNRG 75
Query: 78 LRLRLRRHDVYSVLFPCRCI--GSSGAENEEDGDYVEAFPAIEGRFPDSLDWSDDDDSID 137
R LRR+DV SVLFPCRCI GS G + E DGDY +E FP+SLDWSDDDDSID
Sbjct: 76 GRRGLRRYDVCSVLFPCRCIVGGSGGEKKEGDGDY-----GVEEAFPESLDWSDDDDSID 135
Query: 138 RRAELFIQKFYADMKMERLASI 158
RRAE+FIQKFY DMKMERL SI
Sbjct: 136 RRAEIFIQKFYEDMKMERLTSI 150
BLAST of CaUC05G102220 vs. NCBI nr
Match:
XP_023542510.1 (uncharacterized protein LOC111802395 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 175.3 bits (443), Expect = 4.3e-40
Identity = 102/160 (63.75%), Postives = 116/160 (72.50%), Query Frame = 0
Query: 1 MQSKTPPILQKLSNFLKLSIFIAKMKTPIISNLLFFKKSFRSNNFQLLPHYNHGFLPDFQ 60
MQ K PI +KL NFLK+SIF+AKMK PI LLF KKS + F+LL FQ
Sbjct: 1 MQPKRQPISKKLLNFLKVSIFLAKMKKPIFPKLLFLKKSSPAEKFELL---------QFQ 60
Query: 61 FSPSTTPLFRFYKGRRRLRLRLRRHDVYSVLFPCRCIGSSGAENEEDGDYVEAFPAIEGR 120
FSPSTTPLFR Y+GRRR RLRR VYSVLFPCRCI S G EN DG+ FPAIEGR
Sbjct: 61 FSPSTTPLFRCYRGRRR---RLRRGGVYSVLFPCRCIDSFGGEN--DGEV--GFPAIEGR 120
Query: 121 FPDSLDW---SDDDDSIDRRAELFIQKFYADMKMERLASI 158
++LDW SD+++SIDRRAELFIQKFYADM+MERLA+I
Sbjct: 121 GSEALDWSELSDEEESIDRRAELFIQKFYADMEMERLAAI 144
BLAST of CaUC05G102220 vs. ExPASy TrEMBL
Match:
A0A5A7SZQ9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001120 PE=4 SV=1)
HSP 1 Score: 200.7 bits (509), Expect = 4.6e-48
Identity = 114/161 (70.81%), Postives = 127/161 (78.88%), Query Frame = 0
Query: 1 MQSKTPPILQKLSNFLKLSIFIAKMKTPIISNLLFFKKSFRSNNFQLLPHYNHG-FLPDF 60
MQSK PPI QKLS+FLK+SIFIAKMK P+I LLF KKS + NF+LL HYN+G F+ DF
Sbjct: 1 MQSKRPPIFQKLSSFLKVSIFIAKMKRPLIPKLLFLKKSSGTKNFELLQHYNYGSFVRDF 60
Query: 61 QFSPSTTPLFRFYKGRRRLRLRLRRHDVYSVLFPCRC-IGSSGAE-NEEDGDYVEAFPAI 120
QFSPSTTPLFRF R R LRR+DV SVLFPCRC IG+SG E E+DGDY +
Sbjct: 61 QFSPSTTPLFRF--NNRGSRRGLRRYDVCSVLFPCRCIIGASGGEKKEKDGDY-----DV 120
Query: 121 EGRFPDSLDWSD-DDDSIDRRAELFIQKFYADMKMERLASI 158
E FP+SLDWSD DDDSIDRRAE+FIQKFYADMKMERLASI
Sbjct: 121 EEAFPESLDWSDNDDDSIDRRAEIFIQKFYADMKMERLASI 154
BLAST of CaUC05G102220 vs. ExPASy TrEMBL
Match:
A0A6J1HX57 (uncharacterized protein LOC111467464 OS=Cucurbita maxima OX=3661 GN=LOC111467464 PE=4 SV=1)
HSP 1 Score: 173.3 bits (438), Expect = 7.9e-40
Identity = 101/160 (63.12%), Postives = 114/160 (71.25%), Query Frame = 0
Query: 1 MQSKTPPILQKLSNFLKLSIFIAKMKTPIISNLLFFKKSFRSNNFQLLPHYNHGFLPDFQ 60
MQ K PI QKL NFLK SIF+AKMK PI LLF KKS + F+LL FQ
Sbjct: 1 MQPKRQPISQKLLNFLKASIFLAKMKKPIFPKLLFLKKSSPAKKFELL---------QFQ 60
Query: 61 FSPSTTPLFRFYKGRRRLRLRLRRHDVYSVLFPCRCIGSSGAENEEDGDYVEAFPAIEGR 120
FSPSTTPLFR Y+GRRR RLRR VYSVLFPCRCIG+ G E E + E FPAIEGR
Sbjct: 61 FSPSTTPLFRCYRGRRR---RLRRGGVYSVLFPCRCIGNFGGEIEGE----EGFPAIEGR 120
Query: 121 FPDSLD---WSDDDDSIDRRAELFIQKFYADMKMERLASI 158
++LD SD++DSIDRRAELFI+KFYADM+MERLA+I
Sbjct: 121 VSEALDCSELSDEEDSIDRRAELFIEKFYADMEMERLAAI 144
BLAST of CaUC05G102220 vs. ExPASy TrEMBL
Match:
A0A6J1G0E9 (uncharacterized protein LOC111449533 OS=Cucurbita moschata OX=3662 GN=LOC111449533 PE=4 SV=1)
HSP 1 Score: 170.6 bits (431), Expect = 5.1e-39
Identity = 103/160 (64.38%), Postives = 115/160 (71.88%), Query Frame = 0
Query: 1 MQSKTPPILQKLSNFLKLSIFIAKMKTPIISNLLFFKKSFRSNNFQLLPHYNHGFLPDFQ 60
MQ K PI QKL NFLK+SIF+AKMK PI LLF KKS + F+LL FQ
Sbjct: 1 MQPKRQPISQKLFNFLKVSIFLAKMKKPIFPKLLFLKKSSPAEKFELL---------QFQ 60
Query: 61 FSPSTTPLFRFYKGRRRLRLRLRRHDVYSVLFPCRCIGSSGAENEEDGDYVEAFPAIEGR 120
FSPSTTPLFR Y+GRRR RLRR VYSVLFP RCIGS G EN DG+ FPAIEGR
Sbjct: 61 FSPSTTPLFRCYRGRRR---RLRRGGVYSVLFP-RCIGSFGGEN--DGEV--GFPAIEGR 120
Query: 121 FPDSLDW---SDDDDSIDRRAELFIQKFYADMKMERLASI 158
++ DW SD++DSIDRRAELFIQKFYADM+MERLA+I
Sbjct: 121 GSEAWDWSELSDEEDSIDRRAELFIQKFYADMEMERLAAI 143
BLAST of CaUC05G102220 vs. ExPASy TrEMBL
Match:
A0A5N6RE49 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_015866 PE=4 SV=1)
HSP 1 Score: 146.0 bits (367), Expect = 1.3e-31
Identity = 77/161 (47.83%), Postives = 108/161 (67.08%), Query Frame = 0
Query: 1 MQSKTPPILQKLSNFLKLSIFIAKMKTPIISNLLFFKKSFRSNNFQLLPHYNHGFLPDFQ 60
M K P LQKLSN LK+SI +AKM+ P+I L+F KK+ R F+LL HYN+GFL ++Q
Sbjct: 1 MPRKRLPFLQKLSNLLKVSILVAKMRKPVIPKLIFLKKARRLKKFKLLKHYNYGFLEEYQ 60
Query: 61 FSPSTTPLFRFYKGRRRLRLRLRRHDVYSVLFPCRCIGSSGAENEEDGDY----VEAFPA 120
FS S+TPL ++K + R R D+YS+ F C C+GS AE + D DY + A PA
Sbjct: 61 FSASSTPLIHYHKNHFKSR---RLRDIYSMFFLCACLGSLRAE-KGDADYRLESLPALPA 120
Query: 121 IEGRFPDSLDWSDDDDSIDRRAELFIQKFYADMKMERLASI 158
I G+F + D D++DS+D+RAE FI++FY +M+M+R S+
Sbjct: 121 IAGQFLEPFDSGDEEDSVDQRAERFIRRFYEEMRMQRQESL 157
BLAST of CaUC05G102220 vs. ExPASy TrEMBL
Match:
A0A6J1DC42 (uncharacterized protein LOC111018726 OS=Momordica charantia OX=3673 GN=LOC111018726 PE=4 SV=1)
HSP 1 Score: 137.1 bits (344), Expect = 6.3e-29
Identity = 86/153 (56.21%), Postives = 107/153 (69.93%), Query Frame = 0
Query: 6 PPILQKLSNFLKLSIFIAKMKTPIISNLLFFKKSFRSNNFQLLPHYNHGFLPDFQFSPST 65
P + QKLSNFLK+SIFI ++ PII LLFFKKS + + P+ +GF+ +QFSPST
Sbjct: 2 PLVFQKLSNFLKVSIFITRIGKPIIPKLLFFKKSATARH----PNSYYGFVHHYQFSPST 61
Query: 66 -TPLFRFYKGRRRLRLRLRRHDVYSVLFPCRCIGSSGAENEEDGDY-VEAFPAIEGRFPD 125
TPL +++ RR R RRH VYS+LFPCR SSG + DG+Y VE G+F +
Sbjct: 62 ATPLIHYHRSGRRSR---RRH-VYSLLFPCRSCLSSG--SFRDGNYRVEEAEEEAGQFLE 121
Query: 126 SLDWS-DDDDSIDRRAELFIQKFYADMKMERLA 156
+L+WS D+DDSID RAELFIQKFYADMKME LA
Sbjct: 122 ALEWSEDEDDSIDHRAELFIQKFYADMKMEALA 144
BLAST of CaUC05G102220 vs. TAIR 10
Match:
AT1G68350.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; Has 20 Blast hits to 20 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 77.4 bits (189), Expect = 1.1e-14
Identity = 62/168 (36.90%), Postives = 88/168 (52.38%), Query Frame = 0
Query: 1 MQSKTPPILQKLSNFLKLSIFIAKMKTPIISNL-LFFKKSFRSNNFQLLPHYNHGFLPDF 60
M + PI Q++S LK+SI ++ PII L L K RS +LL +N+ FL ++
Sbjct: 1 MSQRRRPIFQRVSKLLKISI----LRRPIIPRLKLIPIKQRRSKRVKLLQQHNYKFLQEY 60
Query: 61 QFSPSTTPLFRFY-KGRRRLRLRLRRHDVYSVLFPCRCIGSSGAENEEDGDYVE------ 120
QFSPS+T + Y K + R L+R +Y +LF +CI G NE D +
Sbjct: 61 QFSPSSTSFIKCYGKSIQISRSGLKR--IYGLLFLSQCI---GRYNENDDTITQSWMEME 120
Query: 121 --------AFPAIEGRFPDSLDWSDDDDSIDRRAELFIQKFYADMKME 153
A PA E P D+ +DDSID +AE FI+KFY +M+M+
Sbjct: 121 PFHYALGVASPAREHLQP--FDYFSEDDSIDLKAERFIEKFYDEMRMQ 157
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038893176.1 | 5.2e-54 | 75.00 | uncharacterized protein LOC120082033 [Benincasa hispida] | [more] |
XP_004135396.1 | 2.3e-49 | 69.18 | uncharacterized protein LOC101211232 [Cucumis sativus] | [more] |
KAA0034569.1 | 9.5e-48 | 70.81 | uncharacterized protein E6C27_scaffold65G005850 [Cucumis melo var. makuwa] >TYK0... | [more] |
KAE8648793.1 | 3.0e-41 | 67.61 | hypothetical protein Csa_009258 [Cucumis sativus] | [more] |
XP_023542510.1 | 4.3e-40 | 63.75 | uncharacterized protein LOC111802395 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7SZQ9 | 4.6e-48 | 70.81 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A6J1HX57 | 7.9e-40 | 63.13 | uncharacterized protein LOC111467464 OS=Cucurbita maxima OX=3661 GN=LOC111467464... | [more] |
A0A6J1G0E9 | 5.1e-39 | 64.38 | uncharacterized protein LOC111449533 OS=Cucurbita moschata OX=3662 GN=LOC1114495... | [more] |
A0A5N6RE49 | 1.3e-31 | 47.83 | Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_015866 PE=4 SV=1 | [more] |
A0A6J1DC42 | 6.3e-29 | 56.21 | uncharacterized protein LOC111018726 OS=Momordica charantia OX=3673 GN=LOC111018... | [more] |
Match Name | E-value | Identity | Description | |
AT1G68350.1 | 1.1e-14 | 36.90 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |