CaUC05G101480 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC05G101480
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Glyceraldehyde-3-phosphate dehydrogenase A
Location	Ciama_Chr05: 32402235 .. 32405480 (-)
RNA-Seq Expression	CaUC05G101480
Synteny	CaUC05G101480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAATGATTCTCAAAGGAGGACGAGGAATTGGAGTTTCAACTGCTACTTACTTTCCTCACAATTCTAAACCTTCCCCAGTTTTCTCCGTTCACACGGTGCGATTCCTCCTTTTGTTCTCATACCGATTCCGATTCCGATTCCGATTCCATGTTGTTCTTGTCAATTTATTCTTGTTTTGGTTCTCTTATGAATAGACCTACAATTTTAGTTATACCTTTTTCGGGTTTCGTATTATTGTTTTGGTTGATTTTACTTGGTTTTGTTCTTCCGGTTGTAACTAGCTGTGAGGTGCTCGAGTAATAGAAGAAGAAAAGAGGAAATTGAAGCTTAAAGTTTCTCCATAGAATCGTGTCATGTTAGGTAGTTTTGGTTTGCAAAACTATAATATTACATGATTTGGAATTGTAATGCCAAAATAAAGCAGTTAGCAGAAGCTTAAACTGTACTTGAACTATTTCAGGGATTGAATTTGTTATATCATTACTGAACACCAAAGCTTAAACTGATTGGGTTATGATAAATTTAATTATTAATTTATTATTCTTAATATGAAAATTAGCACAATAAGTAACGGATAGTTATCAATATTAGCTGTAGAGGAAACGACTTCATACGGGTTTGAACTTAGGATATATTGCTAACCCAAAAATTAAAGTTGAGGGATTATGGAAAATAAATTAAATTATCAGTAATTCTTGACAGTGTTGAATTATTTCTTTATCTTCTCTCCTGTTTCGATTGGGGGTAGAGTCATGGTTTATACTTTATATGTATATAGATTATGATTACATTATAAATATAGAAAAGAGGATTTAAACCTAAGATATGAGGCACGTATAAGTTCATAACGACTTTGCTTAAGTCGGTGATACGATAGTAGTTGTGGCAAAGGACATCAGAATGGTTGAGCCATAATTTCTGCCTTAGGTATCTTTTTCTTTGAATTGTTTCTAGAAATATAAGTTTTTCTTCCATTCATGATCTTGTTGTATTCCTGCAATACCAGAAAGAACGCATGAGTTCAATCACTTAAAGAAAACGAAAAGGCATAGTCAGTATTTGTCAGTATACCAAAATCTACTAAAACAGTGGAGTGATAGTATCATATCACCTAGCTTTTATGATTATAGTTGGAATCTGTTGTCTCTATTCGTCTCTACGGATACATCCTGCTCTTCATTTTATAATTTTAGCTAACAAAAAGAGTAGATATAACTTAAGTTGACTTGTGCAGGTGGTACATAAGCTTGCAGCTGAACGCAGAGTCATATGCTGCTCTACTTTGCAGGAATCATCTACTCCAACAGGTTAGTTGCTGGCCAGTTTTTCCAAGTACCTCTGAAAGATTGACGGAAGGAAATTCAACGACTATAACTTTATACTTTTATATGCCAGAAAAATGACTTTGATATATTTCTCAAATTTTTTTTTGTCCTATATTATTAGGTGTTTGTTTAGACTTCACGAGTTTTTAACATGTTTAACAAATGTTGGACTTGCATTTAATTTGTGTATTGTGCTAACAAGTATCTACATATCCAACAAGTACCATGAGTGTCCAAGCATCTAACATGTGTCAGACAACGATACACCAACCAAACTAAAGTGTCTGTGCTTCTTAGGTGATCCCTATAACTTTTGTTTATCTTTTTTCTCTTCCAAATGAAAAGGGTCAGGCTTTGGTTCATTTGTTTCTTTCTGCTGTGTTTATTAATACTCAATTTATGGCATCTGCTGAAATGGAAGTCTTTTCTATCAGTTTCTGCTGAGCCAAAGGAGATAAAGACAGTTCCGAAGGAAGCCCCAGCAAAGGCCAGACCACCAGCAAAAGCGCCAGCGAAGCCACTGCCTGAGTTGATGGAGGAAGATGTCATACCTTCGCTGAAAGCCATTCTTGAAGCACAAGCCGATGTCTCCAATATTGAATTATCGTTCCAAGACGACAGAGTTAGTTTCTACTATCCTCATTTCTCTTTCACTAATCAACTCTTAACTTGGGCTCATTGAATTTGGATTGACAATGGCAGTTGGATGGTTCATTCTTGAAAAATGGAGTTCCCTACTCATTTTGGGCTTTCTTCCCCAATGGCCTCACAGGTACTTAAATTCTTGGATAATGTAAATTACAGTACCCTGAGCTTTAAATTACTCATATTATTTTAAAATATGTCACGCTGCCATTGACCTTTCATAAATATTTTAAAACTACTTTTGGAATAAAAATCCATTAGAATGTTAGACGAAAATTGGGGCCTAGAACATTGTAGCGAGCGATGACCTTGAATAGAAATTAGGACTTGAACACCATGCCTATTCTAGGTTCTGATTCCCATATAAAATTCTAGCCGATATCTATTCTAAATGGTAGTTTTGCAACATTTGTTAGGATACCTCCTAACAAGACACACTCAAGAACAATCAAATATGAAAATATATGTAAATATGTTATAATATCATAAGAAAAGTAACAAGATAACCTAGTCGAGAGGCTAGTCTCTTCCAAATTCCCCAAAGGTAGTCCCACCCAAAATTCTTCACTCTCACCTACTATTTATAACCCAAAAGATCTAACAAACTTAACGTCTAATTACTAGAATACCCCTTACTACTACACTAATCATATTAATATTCCTACTATGACCAAAACAAACTAAGGGTCTTACACATTTATGAAAGGTCAAAGGTAATATTGCAATTTTTAAAATAAAATAGGTATTGTTGAAAAACGGAAAAAACATCTAAGCTTGATGTTTGAGACTCTTCAATGGTTAAATCACGAACAGGTCCAAAAGGGTTTTCACTGTCTTCGTATGGCAATGGAGGAAGCTCCGTTGAACCCTTTCTTGTCGATGAGAAGAAAGTTACAGCAAAGCTTGTAGTTTTCTGGATTGAGAAGCGTTTGGCCGCACAAGGAATTATACCAGTCTGGAGAGACTAATCAACAAAATTATTCTTTTTTATTTTCACTTTTTTTACCCTTTTTTTGGGTGGGGGCTTCTTTGCAAATGGTGTATAGCATAATTCTCCATTCTATTGCAATTTGCTCCTTCAACAATGTTAGCTGATCCTATGAAATGTATCAACCTTTTAGTCTCAGAAGATCATTTTCTCCCTTTTCTACTATCAAGGACTAAGGAGCTTAATGTGATCCTTACCTAATAGAATGTAAATTCCATAAAATTCTCAATTACCATTGCACCGCTGGTTAATACCAATTTGACCCATTGGTTATGTTAAATTAA

mRNA sequence

ATGGCAATGATTCTCAAAGGAGGACGAGGAATTGGAGTTTCAACTGCTACTTACTTTCCTCACAATTCTAAACCTTCCCCAGTTTTCTCCGTTCACACGGTGCGATTCCTCCTTTTGTTCTCATACCGATTCCGATTCCGATTCCGATTCCATGTTGTTCTTGTCAATTTATTCTTGTTTTGGCTTTGGTTCATTTGTTTCTTTCTGCTGTGTTTATTAATACTCAATTTATGGCATCTGCTGAAATGGAAGTCTTTTCTATCAGTTTCTGCTGAGCCAAAGGAGATAAAGACAGTTCCGAAGGAAGCCCCAGCAAAGGCCAGACCACCAGCAAAAGCGCCAGCGAAGCCACTGCCTGAGTTGATGGAGGAAGATGTCATACCTTCGCTGAAAGCCATTCTTGAAGCACAAGCCGATGTCTCCAATATTGAATTATCGTTCCAAGACGACAGATTGGATGGTTCATTCTTGAAAAATGGAGTTCCCTACTCATTTTGGGCTTTCTTCCCCAATGGCCTCACAGGTCCAAAAGGGTTTTCACTGTCTTCGTATGGCAATGGAGGAAGCTCCGTTGAACCCTTTCTTGTCGATGAGAAGAAAGTTACAGCAAAGCTTGTAGTTTTCTGGATTGAGAAGCGTTTGGCCGCACAAGGAATTATACCAGTCTGGAGAGACTAATCAACAAAATTATTCTTTTTTATTTTCACTTTTTTTACCCTTTTTTTGGGTGGGGGCTTCTTTGCAAATGGTGTATAGCATAATTCTCCATTCTATTGCAATTTGCTCCTTCAACAATGTTAGCTGATCCTATGAAATGTATCAACCTTTTAGTCTCAGAAGATCATTTTCTCCCTTTTCTACTATCAAGGACTAAGGAGCTTAATGTGATCCTTACCTAATAGAATGTAAATTCCATAAAATTCTCAATTACCATTGCACCGCTGGTTAATACCAATTTGACCCATTGGTTATGTTAAATTAA

Coding sequence (CDS)

ATGGCAATGATTCTCAAAGGAGGACGAGGAATTGGAGTTTCAACTGCTACTTACTTTCCTCACAATTCTAAACCTTCCCCAGTTTTCTCCGTTCACACGGTGCGATTCCTCCTTTTGTTCTCATACCGATTCCGATTCCGATTCCGATTCCATGTTGTTCTTGTCAATTTATTCTTGTTTTGGCTTTGGTTCATTTGTTTCTTTCTGCTGTGTTTATTAATACTCAATTTATGGCATCTGCTGAAATGGAAGTCTTTTCTATCAGTTTCTGCTGAGCCAAAGGAGATAAAGACAGTTCCGAAGGAAGCCCCAGCAAAGGCCAGACCACCAGCAAAAGCGCCAGCGAAGCCACTGCCTGAGTTGATGGAGGAAGATGTCATACCTTCGCTGAAAGCCATTCTTGAAGCACAAGCCGATGTCTCCAATATTGAATTATCGTTCCAAGACGACAGATTGGATGGTTCATTCTTGAAAAATGGAGTTCCCTACTCATTTTGGGCTTTCTTCCCCAATGGCCTCACAGGTCCAAAAGGGTTTTCACTGTCTTCGTATGGCAATGGAGGAAGCTCCGTTGAACCCTTTCTTGTCGATGAGAAGAAAGTTACAGCAAAGCTTGTAGTTTTCTGGATTGAGAAGCGTTTGGCCGCACAAGGAATTATACCAGTCTGGAGAGACTAA

Protein sequence

MAMILKGGRGIGVSTATYFPHNSKPSPVFSVHTVRFLLLFSYRFRFRFRFHVVLVNLFLFWLWFICFFLLCLLILNLWHLLKWKSFLSVSAEPKEIKTVPKEAPAKARPPAKAPAKPLPELMEEDVIPSLKAILEAQADVSNIELSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLVVFWIEKRLAAQGIIPVWRD

Homology

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BLAST of CaUC05G101480 vs. NCBI nr
Match: XP_038891519.1 (uncharacterized protein LOC120080914 isoform X1 [Benincasa hispida])

HSP 1 Score: 301.2 bits (770), Expect = 7.4e-78
Identity = 163/225 (72.44%), Postives = 178/225 (79.11%), Query Frame = 0


Query: 1   MAMILKGGRGIGVSTATYFPHNSKPSPVFSVHTVRFLLLFSYRFRFRFRFHVVLVNLFLF 60
           MAMILKGGRGIGVSTATYFPHNSKPSPVFS+HT+   L    +                 
Sbjct: 1   MAMILKGGRGIGVSTATYFPHNSKPSPVFSLHTMVHKLAAERK----------------- 60

Query: 61  WLWFICFFLLCLLILNLWHLLKWKSFLSVSAEPKEIKTVPKEAPAKARPPAKAPAKPLPE 120
                   ++C         L+  S  +V+AEPKEIKTVPKEAPAKA+PPAKAP KPLPE
Sbjct: 61  --------VVCC------STLQESSTPTVAAEPKEIKTVPKEAPAKAKPPAKAPVKPLPE 120

Query: 121 LMEEDVIPSLKAILEAQADVSNIELSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGFS 180
           LMEEDVIPSLKAILEAQADVS+I LSFQD+RLDGSFLKNGVPY+FWAFFPNGLTGPKGFS
Sbjct: 121 LMEEDVIPSLKAILEAQADVSDIGLSFQDNRLDGSFLKNGVPYTFWAFFPNGLTGPKGFS 180

Query: 181 LSSYGNGGSSVEPFLVDEKKVTAKLVVFWIEKRLAAQGIIPVWRD 226
           LSSYGNGGSSVEPFLVDEKKVTAKL+VFWIEKRLAAQGIIPVW++
Sbjct: 181 LSSYGNGGSSVEPFLVDEKKVTAKLIVFWIEKRLAAQGIIPVWKN 194

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BLAST of CaUC05G101480 vs. NCBI nr
Match: XP_004135038.1 (uncharacterized protein LOC101205552 [Cucumis sativus] >KGN52187.1 hypothetical protein Csa_009193 [Cucumis sativus])

HSP 1 Score: 295.4 bits (755), Expect = 4.1e-76
Identity = 158/225 (70.22%), Postives = 175/225 (77.78%), Query Frame = 0


Query: 1   MAMILKGGRGIGVSTATYFPHNSKPSPVFSVHTVRFLLLFSYRFRFRFRFHVVLVNLFLF 60
           MAMILKGGRGIGVSTATYFPHN KPSP+FS+H +   L    +                 
Sbjct: 1   MAMILKGGRGIGVSTATYFPHNPKPSPLFSLHMMVHKLAAERK----------------- 60

Query: 61  WLWFICFFLLCLLILNLWHLLKWKSFLSVSAEPKEIKTVPKEAPAKARPPAKAPAKPLPE 120
                   ++C         L+  S  +V+AEPKEIKTVPKEAPAKA+PPAKAP KPLPE
Sbjct: 61  --------VICC------STLQESSTPTVAAEPKEIKTVPKEAPAKAKPPAKAPVKPLPE 120

Query: 121 LMEEDVIPSLKAILEAQADVSNIELSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGFS 180
           LM+E+VIPSLKAILEAQADVS++ LSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGFS
Sbjct: 121 LMDEEVIPSLKAILEAQADVSDVALSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGFS 180

Query: 181 LSSYGNGGSSVEPFLVDEKKVTAKLVVFWIEKRLAAQGIIPVWRD 226
           LSSYGNGGSSVEPFLVDEKKV+ KL+VFWIEKRLAAQGIIPVW+D
Sbjct: 181 LSSYGNGGSSVEPFLVDEKKVSGKLIVFWIEKRLAAQGIIPVWKD 194

[Close]

BLAST of CaUC05G101480 vs. NCBI nr
Match: XP_022986445.1 (uncharacterized protein LOC111484155 [Cucurbita maxima] >XP_022986526.1 uncharacterized protein LOC111484155 [Cucurbita maxima])

HSP 1 Score: 294.7 bits (753), Expect = 6.9e-76
Identity = 162/225 (72.00%), Postives = 173/225 (76.89%), Query Frame = 0


Query: 1   MAMILKGGRGIGVSTATYFPHNSKPSPVFSVHTVRFLLLFSYRFRFRFRFHVVLVNLFLF 60
           MAMILKGG GIGVSTATYFP NSKPSPVFSVHTV  LL                      
Sbjct: 1   MAMILKGGGGIGVSTATYFPQNSKPSPVFSVHTVHKLLAERR------------------ 60

Query: 61  WLWFICFFLLCLLILNLWHLLKWKSFLSVSAEPKEIKTVPKEAPAKARPPAKAPAKPLPE 120
                   ++C         L+  S  +VSAEPKEIK V KEAPAK +PPAKAP KPLP+
Sbjct: 61  --------VICC------STLQESSTPTVSAEPKEIKAVQKEAPAKPKPPAKAPVKPLPQ 120

Query: 121 LMEEDVIPSLKAILEAQADVSNIELSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGFS 180
           +MEEDVIPSLKAILEAQADV++IELSFQDDRLDGSF KNGVPYSFWAFFPNGLTGPKGFS
Sbjct: 121 MMEEDVIPSLKAILEAQADVADIELSFQDDRLDGSFSKNGVPYSFWAFFPNGLTGPKGFS 180

Query: 181 LSSYGNGGSSVEPFLVDEKKVTAKLVVFWIEKRLAAQGIIPVWRD 226
           LSSYGNGGSSVEPFLVDEKKVTAKL+VFWIEKRLAAQGIIPVW+D
Sbjct: 181 LSSYGNGGSSVEPFLVDEKKVTAKLLVFWIEKRLAAQGIIPVWKD 193

[Close]

BLAST of CaUC05G101480 vs. NCBI nr
Match: XP_022956513.1 (uncharacterized protein LOC111458230 [Cucurbita moschata] >XP_023539763.1 uncharacterized protein LOC111800345 [Cucurbita pepo subsp. pepo] >KAG7032019.1 hypothetical protein SDJN02_06061 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 291.6 bits (745), Expect = 5.9e-75
Identity = 161/225 (71.56%), Postives = 174/225 (77.33%), Query Frame = 0


Query: 1   MAMILKGGRGIGVSTATYFPHNSKPSPVFSVHTVRFLLLFSYRFRFRFRFHVVLVNLFLF 60
           MAMILKGG GIGVSTATYFP NSKPSPVFSVHTV       ++     R           
Sbjct: 1   MAMILKGGGGIGVSTATYFPQNSKPSPVFSVHTV-------HKLPAERR----------- 60

Query: 61  WLWFICFFLLCLLILNLWHLLKWKSFLSVSAEPKEIKTVPKEAPAKARPPAKAPAKPLPE 120
                   ++C         L+  S  +VSAEPKEIK V KEAPAK +PPAKAP KPLP+
Sbjct: 61  --------VICC------STLQESSTPTVSAEPKEIKAVQKEAPAKPKPPAKAPVKPLPQ 120

Query: 121 LMEEDVIPSLKAILEAQADVSNIELSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGFS 180
           +MEEDVIPSLKAILEAQADV++IELSFQDDRLDGSF KNGVPYSFWAFFPNGLTGPKGFS
Sbjct: 121 MMEEDVIPSLKAILEAQADVADIELSFQDDRLDGSFSKNGVPYSFWAFFPNGLTGPKGFS 180

Query: 181 LSSYGNGGSSVEPFLVDEKKVTAKLVVFWIEKRLAAQGIIPVWRD 226
           LSSYGNGGSSVEPFLVDEKKVTAKL+VFWIEKRLAAQGIIPVW+D
Sbjct: 181 LSSYGNGGSSVEPFLVDEKKVTAKLLVFWIEKRLAAQGIIPVWKD 193

[Close]

BLAST of CaUC05G101480 vs. NCBI nr
Match: XP_008446754.1 (PREDICTED: uncharacterized protein LOC103489386 [Cucumis melo] >KAA0034651.1 DUF2996 family protein [Cucumis melo var. makuwa] >TYK09202.1 DUF2996 family protein [Cucumis melo var. makuwa])

HSP 1 Score: 288.1 bits (736), Expect = 6.5e-74
Identity = 158/226 (69.91%), Postives = 175/226 (77.43%), Query Frame = 0


Query: 1   MAMILKGGRGIGVSTATYFP-HNSKPSPVFSVHTVRFLLLFSYRFRFRFRFHVVLVNLFL 60
           MAMILKGGRG+GVSTATYFP HN KPSP+FS+H +   L    +                
Sbjct: 1   MAMILKGGRGLGVSTATYFPAHNPKPSPLFSLHMMVHKLAAERK---------------- 60

Query: 61  FWLWFICFFLLCLLILNLWHLLKWKSFLSVSAEPKEIKTVPKEAPAKARPPAKAPAKPLP 120
                    ++C         L+  S  +V+AEPKEIKTVPKEAPAKA+PPAKA  KPLP
Sbjct: 61  ---------VICC------STLQESSTPTVAAEPKEIKTVPKEAPAKAKPPAKAAVKPLP 120

Query: 121 ELMEEDVIPSLKAILEAQADVSNIELSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGF 180
           ELMEE+VIPSLKAILEAQADV +IELSFQDDRLDGSFLK+GVPYSFWAFFPNGLTGPKGF
Sbjct: 121 ELMEEEVIPSLKAILEAQADVYDIELSFQDDRLDGSFLKDGVPYSFWAFFPNGLTGPKGF 180

Query: 181 SLSSYGNGGSSVEPFLVDEKKVTAKLVVFWIEKRLAAQGIIPVWRD 226
           SLSSYGNGGSSVEPFLVDEKKV+AKL+VFWIEKRLAAQGIIPVW+D
Sbjct: 181 SLSSYGNGGSSVEPFLVDEKKVSAKLIVFWIEKRLAAQGIIPVWKD 195

[Close]

BLAST of CaUC05G101480 vs. ExPASy TrEMBL
Match: A0A0A0KUS0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G614630 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 2.0e-76
Identity = 158/225 (70.22%), Postives = 175/225 (77.78%), Query Frame = 0


Query: 1   MAMILKGGRGIGVSTATYFPHNSKPSPVFSVHTVRFLLLFSYRFRFRFRFHVVLVNLFLF 60
           MAMILKGGRGIGVSTATYFPHN KPSP+FS+H +   L    +                 
Sbjct: 1   MAMILKGGRGIGVSTATYFPHNPKPSPLFSLHMMVHKLAAERK----------------- 60

Query: 61  WLWFICFFLLCLLILNLWHLLKWKSFLSVSAEPKEIKTVPKEAPAKARPPAKAPAKPLPE 120
                   ++C         L+  S  +V+AEPKEIKTVPKEAPAKA+PPAKAP KPLPE
Sbjct: 61  --------VICC------STLQESSTPTVAAEPKEIKTVPKEAPAKAKPPAKAPVKPLPE 120

Query: 121 LMEEDVIPSLKAILEAQADVSNIELSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGFS 180
           LM+E+VIPSLKAILEAQADVS++ LSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGFS
Sbjct: 121 LMDEEVIPSLKAILEAQADVSDVALSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGFS 180

Query: 181 LSSYGNGGSSVEPFLVDEKKVTAKLVVFWIEKRLAAQGIIPVWRD 226
           LSSYGNGGSSVEPFLVDEKKV+ KL+VFWIEKRLAAQGIIPVW+D
Sbjct: 181 LSSYGNGGSSVEPFLVDEKKVSGKLIVFWIEKRLAAQGIIPVWKD 194

[Close]

BLAST of CaUC05G101480 vs. ExPASy TrEMBL
Match: A0A6J1JE31 (uncharacterized protein LOC111484155 OS=Cucurbita maxima OX=3661 GN=LOC111484155 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 3.4e-76
Identity = 162/225 (72.00%), Postives = 173/225 (76.89%), Query Frame = 0


Query: 1   MAMILKGGRGIGVSTATYFPHNSKPSPVFSVHTVRFLLLFSYRFRFRFRFHVVLVNLFLF 60
           MAMILKGG GIGVSTATYFP NSKPSPVFSVHTV  LL                      
Sbjct: 1   MAMILKGGGGIGVSTATYFPQNSKPSPVFSVHTVHKLLAERR------------------ 60

Query: 61  WLWFICFFLLCLLILNLWHLLKWKSFLSVSAEPKEIKTVPKEAPAKARPPAKAPAKPLPE 120
                   ++C         L+  S  +VSAEPKEIK V KEAPAK +PPAKAP KPLP+
Sbjct: 61  --------VICC------STLQESSTPTVSAEPKEIKAVQKEAPAKPKPPAKAPVKPLPQ 120

Query: 121 LMEEDVIPSLKAILEAQADVSNIELSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGFS 180
           +MEEDVIPSLKAILEAQADV++IELSFQDDRLDGSF KNGVPYSFWAFFPNGLTGPKGFS
Sbjct: 121 MMEEDVIPSLKAILEAQADVADIELSFQDDRLDGSFSKNGVPYSFWAFFPNGLTGPKGFS 180

Query: 181 LSSYGNGGSSVEPFLVDEKKVTAKLVVFWIEKRLAAQGIIPVWRD 226
           LSSYGNGGSSVEPFLVDEKKVTAKL+VFWIEKRLAAQGIIPVW+D
Sbjct: 181 LSSYGNGGSSVEPFLVDEKKVTAKLLVFWIEKRLAAQGIIPVWKD 193

[Close]

BLAST of CaUC05G101480 vs. ExPASy TrEMBL
Match: A0A6J1GX25 (uncharacterized protein LOC111458230 OS=Cucurbita moschata OX=3662 GN=LOC111458230 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.8e-75
Identity = 161/225 (71.56%), Postives = 174/225 (77.33%), Query Frame = 0


Query: 1   MAMILKGGRGIGVSTATYFPHNSKPSPVFSVHTVRFLLLFSYRFRFRFRFHVVLVNLFLF 60
           MAMILKGG GIGVSTATYFP NSKPSPVFSVHTV       ++     R           
Sbjct: 1   MAMILKGGGGIGVSTATYFPQNSKPSPVFSVHTV-------HKLPAERR----------- 60

Query: 61  WLWFICFFLLCLLILNLWHLLKWKSFLSVSAEPKEIKTVPKEAPAKARPPAKAPAKPLPE 120
                   ++C         L+  S  +VSAEPKEIK V KEAPAK +PPAKAP KPLP+
Sbjct: 61  --------VICC------STLQESSTPTVSAEPKEIKAVQKEAPAKPKPPAKAPVKPLPQ 120

Query: 121 LMEEDVIPSLKAILEAQADVSNIELSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGFS 180
           +MEEDVIPSLKAILEAQADV++IELSFQDDRLDGSF KNGVPYSFWAFFPNGLTGPKGFS
Sbjct: 121 MMEEDVIPSLKAILEAQADVADIELSFQDDRLDGSFSKNGVPYSFWAFFPNGLTGPKGFS 180

Query: 181 LSSYGNGGSSVEPFLVDEKKVTAKLVVFWIEKRLAAQGIIPVWRD 226
           LSSYGNGGSSVEPFLVDEKKVTAKL+VFWIEKRLAAQGIIPVW+D
Sbjct: 181 LSSYGNGGSSVEPFLVDEKKVTAKLLVFWIEKRLAAQGIIPVWKD 193

[Close]

BLAST of CaUC05G101480 vs. ExPASy TrEMBL
Match: A0A5A7SZ21 (DUF2996 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001950 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 3.1e-74
Identity = 158/226 (69.91%), Postives = 175/226 (77.43%), Query Frame = 0


Query: 1   MAMILKGGRGIGVSTATYFP-HNSKPSPVFSVHTVRFLLLFSYRFRFRFRFHVVLVNLFL 60
           MAMILKGGRG+GVSTATYFP HN KPSP+FS+H +   L    +                
Sbjct: 1   MAMILKGGRGLGVSTATYFPAHNPKPSPLFSLHMMVHKLAAERK---------------- 60

Query: 61  FWLWFICFFLLCLLILNLWHLLKWKSFLSVSAEPKEIKTVPKEAPAKARPPAKAPAKPLP 120
                    ++C         L+  S  +V+AEPKEIKTVPKEAPAKA+PPAKA  KPLP
Sbjct: 61  ---------VICC------STLQESSTPTVAAEPKEIKTVPKEAPAKAKPPAKAAVKPLP 120

Query: 121 ELMEEDVIPSLKAILEAQADVSNIELSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGF 180
           ELMEE+VIPSLKAILEAQADV +IELSFQDDRLDGSFLK+GVPYSFWAFFPNGLTGPKGF
Sbjct: 121 ELMEEEVIPSLKAILEAQADVYDIELSFQDDRLDGSFLKDGVPYSFWAFFPNGLTGPKGF 180

Query: 181 SLSSYGNGGSSVEPFLVDEKKVTAKLVVFWIEKRLAAQGIIPVWRD 226
           SLSSYGNGGSSVEPFLVDEKKV+AKL+VFWIEKRLAAQGIIPVW+D
Sbjct: 181 SLSSYGNGGSSVEPFLVDEKKVSAKLIVFWIEKRLAAQGIIPVWKD 195

[Close]

BLAST of CaUC05G101480 vs. ExPASy TrEMBL
Match: A0A1S3BGH0 (uncharacterized protein LOC103489386 OS=Cucumis melo OX=3656 GN=LOC103489386 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 3.1e-74
Identity = 158/226 (69.91%), Postives = 175/226 (77.43%), Query Frame = 0


Query: 1   MAMILKGGRGIGVSTATYFP-HNSKPSPVFSVHTVRFLLLFSYRFRFRFRFHVVLVNLFL 60
           MAMILKGGRG+GVSTATYFP HN KPSP+FS+H +   L    +                
Sbjct: 1   MAMILKGGRGLGVSTATYFPAHNPKPSPLFSLHMMVHKLAAERK---------------- 60

Query: 61  FWLWFICFFLLCLLILNLWHLLKWKSFLSVSAEPKEIKTVPKEAPAKARPPAKAPAKPLP 120
                    ++C         L+  S  +V+AEPKEIKTVPKEAPAKA+PPAKA  KPLP
Sbjct: 61  ---------VICC------STLQESSTPTVAAEPKEIKTVPKEAPAKAKPPAKAAVKPLP 120

Query: 121 ELMEEDVIPSLKAILEAQADVSNIELSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGF 180
           ELMEE+VIPSLKAILEAQADV +IELSFQDDRLDGSFLK+GVPYSFWAFFPNGLTGPKGF
Sbjct: 121 ELMEEEVIPSLKAILEAQADVYDIELSFQDDRLDGSFLKDGVPYSFWAFFPNGLTGPKGF 180

Query: 181 SLSSYGNGGSSVEPFLVDEKKVTAKLVVFWIEKRLAAQGIIPVWRD 226
           SLSSYGNGGSSVEPFLVDEKKV+AKL+VFWIEKRLAAQGIIPVW+D
Sbjct: 181 SLSSYGNGGSSVEPFLVDEKKVSAKLIVFWIEKRLAAQGIIPVWKD 195

[Close]

BLAST of CaUC05G101480 vs. TAIR 10
Match: AT2G04039.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2996 (InterPro:IPR021374); Has 157 Blast hits to 157 proteins in 52 species: Archae - 0; Bacteria - 76; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). )

HSP 1 Score: 167.9 bits (424), Expect = 9.1e-42
Identity = 87/126 (69.05%), Postives = 104/126 (82.54%), Query Frame = 0


Query: 99  VPKEAPAKARPPAKAPAKPLPELMEEDVIPSLKAILEAQADVSNIELSFQDDRLDGSFLK 158
           VP + P K    A A AKPL ++MEEDVIP L+AILE+Q D+S+I+LSFQDD+L+G FLK
Sbjct: 39  VPAKKP-KPAAKAAAVAKPLRQMMEEDVIPPLQAILESQDDISDIDLSFQDDKLEGFFLK 98

Query: 159 NGVPYSFWAFFPNG-LTGPKGFSLSSYGNGGSSVEPFLVDEKKVTAKLVVFWIEKRLAAQ 218
             +PYSFWAFFP G LTG KGFS+SS+G+G S+VEPFLVDE+K TA  VVFW+EKRLAAQ
Sbjct: 99  KSIPYSFWAFFPTGNLTGAKGFSISSHGSGPSTVEPFLVDERKPTANHVVFWVEKRLAAQ 158

Query: 219 GIIPVW 224
           GIIPVW
Sbjct: 159 GIIPVW 163

[Close]

BLAST of CaUC05G101480 vs. TAIR 10
Match: AT2G04039.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2996 (InterPro:IPR021374); Has 159 Blast hits to 159 proteins in 52 species: Archae - 0; Bacteria - 76; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). )

HSP 1 Score: 167.2 bits (422), Expect = 1.6e-41
Identity = 95/156 (60.90%), Postives = 115/156 (73.72%), Query Frame = 0


Query: 76  NLWHLLKWKSFLSVSAEPKEIKTVPKEA----PAKARPP---AKAPAKPLPELMEEDVIP 135
           NL      +S  S  A  K+ K   +E+    PAK   P   A A AKPL ++MEEDVIP
Sbjct: 42  NLLRCALQESSTSAVATEKKNKEEGEESTVAVPAKKPKPAAKAAAVAKPLRQMMEEDVIP 101

Query: 136 SLKAILEAQADVSNIELSFQDDRLDGSFLKNGVPYSFWAFFPNG-LTGPKGFSLSSYGNG 195
            L+AILE+Q D+S+I+LSFQDD+L+G FLK  +PYSFWAFFP G LTG KGFS+SS+G+G
Sbjct: 102 PLQAILESQDDISDIDLSFQDDKLEGFFLKKSIPYSFWAFFPTGNLTGAKGFSISSHGSG 161

Query: 196 GSSVEPFLVDEKKVTAKLVVFWIEKRLAAQGIIPVW 224
            S+VEPFLVDE+K TA  VVFW+EKRLAAQGIIPVW
Sbjct: 162 PSTVEPFLVDERKPTANHVVFWVEKRLAAQGIIPVW 197

[Close]

BLAST of CaUC05G101480 vs. TAIR 10
Match: AT2G04039.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2996 (InterPro:IPR021374); Has 38 Blast hits to 38 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 91.3 bits (225), Expect = 1.1e-18
Identity = 58/108 (53.70%), Postives = 72/108 (66.67%), Query Frame = 0


Query: 76  NLWHLLKWKSFLSVSAEPKEIKTVPKEA----PAKARPP---AKAPAKPLPELMEEDVIP 135
           NL      +S  S  A  K+ K   +E+    PAK   P   A A AKPL ++MEEDVIP
Sbjct: 42  NLLRCALQESSTSAVATEKKNKEEGEESTVAVPAKKPKPAAKAAAVAKPLRQMMEEDVIP 101

Query: 136 SLKAILEAQADVSNIELSFQDDRLDGSFLKNGVPYSFWAFFPNG-LTG 176
            L+AILE+Q D+S+I+LSFQDD+L+G FLK  +PYSFWAFFP G LTG
Sbjct: 102 PLQAILESQDDISDIDLSFQDDKLEGFFLKKSIPYSFWAFFPTGNLTG 149

The following BLAST results are available for this feature:

BLAST of CaUC05G101480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891519.1	7.4e-78	72.44	uncharacterized protein LOC120080914 isoform X1 [Benincasa hispida]	[more]
XP_004135038.1	4.1e-76	70.22	uncharacterized protein LOC101205552 [Cucumis sativus] >KGN52187.1 hypothetical ...	[more]
XP_022986445.1	6.9e-76	72.00	uncharacterized protein LOC111484155 [Cucurbita maxima] >XP_022986526.1 uncharac...	[more]
XP_022956513.1	5.9e-75	71.56	uncharacterized protein LOC111458230 [Cucurbita moschata] >XP_023539763.1 unchar...	[more]
XP_008446754.1	6.5e-74	69.91	PREDICTED: uncharacterized protein LOC103489386 [Cucumis melo] >KAA0034651.1 DUF...	[more]

BLAST of CaUC05G101480 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC05G101480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUS0	2.0e-76	70.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G614630 PE=4 SV=1	[more]
A0A6J1JE31	3.4e-76	72.00	uncharacterized protein LOC111484155 OS=Cucurbita maxima OX=3661 GN=LOC111484155...	[more]
A0A6J1GX25	2.8e-75	71.56	uncharacterized protein LOC111458230 OS=Cucurbita moschata OX=3662 GN=LOC1114582...	[more]
A0A5A7SZ21	3.1e-74	69.91	DUF2996 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4...	[more]
A0A1S3BGH0	3.1e-74	69.91	uncharacterized protein LOC103489386 OS=Cucumis melo OX=3656 GN=LOC103489386 PE=...	[more]

BLAST of CaUC05G101480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G04039.2	9.1e-42	69.05	unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloropla...	[more]
AT2G04039.1	1.6e-41	60.90	unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloropla...	[more]
AT2G04039.3	1.1e-18	53.70	unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloropla...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021374	Protein of unknown function DUF2996	PFAM	PF11210	DUF2996	coord: 115..217 e-value: 7.1E-13 score: 49.1
IPR021374	Protein of unknown function DUF2996	PANTHER	PTHR36341	DUF2996 FAMILY PROTEIN	coord: 87..224

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC05G101480.1	CaUC05G101480.1	mRNA