CaUC05G100310 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC05G100310
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	LIM domain-containing protein WLIM1
Location	Ciama_Chr05: 31189922 .. 31191461 (+)
RNA-Seq Expression	CaUC05G100310
Synteny	CaUC05G100310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCAGACAAATTAATTACCAATTATACCCTCCACCTTTAGATTTGTCTATTTGAACCTCTACACACACCCATATCTTTTGCATCCATTGCCAATTCCTATCTCTTTTCCCCCTTCCTTATCTCCTTCACATTGTCTTCTTCTTCCTCCTCCTTCCCCTTAAACACCGATCGACTTAAATTTCAACACAGAAAAACTGACATTTTTCTTTTACATCCGAGTTTCTTAAAAAGAAAAAGAAAAAGAAACTCTTTTTGCAACAGCCATGGCTTTTGCAGGAACCACCCAGAAATGCATGGCCTGCGACAAAACTGTCTATTTAGTCGACAAGCTCACTGCTGACAATCGTGTCTACCACAAAGCTTGCTTCCGCTGTCACCACTGCAATGGAACCCTTAAGGTAATCAGTATCCCTTTATATCAAACTCTGATCTGTCGTTTCATTGAAATCAGATTTCAGATCGCTAACTGGAAAGCTTAATTTTGGTGGGTTATGGTTAAATTAAACGATTCACTGATTACAGATCTGATTTGCAGCTAAGCAATTACAATTCGTTTGAAGGGGTGCTTTATTGTCGGCCACACTTCGATCAGCTCTTTAAAAGAACTGGAAGCTTAGACAAAAGCTTCGAAGGTATTCAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAATCGCTTTAAATCATTCACTCTCATCAGCTCGAGCCAACATTCTTTTGTTTTTTGATTTTAGGAACACCAAAGATTGGGAAACCGGAGAAACCGGCTGATTCTGAGGTAGCTAATTGATTATATTATTCTCTGTTTTGTGTTAATTTCAACTCAAAAGGGATTACTCAAATGCATTTGACAGAAACCAACAGCGACTAAGGTTGCAAGCATGTTCATCGGTACTAAAGACAAGTGCCTTGGCTGTAAGAACACTGTTTATCCAACTGAGAAGGTAAATTTGAGCTGAAATGGAAGAAGCACTGTTCTGAAGTGGGTAGTTGAAATAATTGTAAACTTTAAGACCATTTATGTATGTTTTTCTCAGGTTTCAGTGAATGGAACTTCGTACCATAAGAGCTGCTTCAAGTGCTGCCATGGCGGATGTACAATCAGCCCATCAAATTACATTGCACATGAAGGTCGACTTTACTGCAAACATCACCATACCCAACTCATCAAAGAAAAAGGAAACTTGAGCCAGCTGGAAGGAAGCCATTAAAGGACCTTACACTCGTAGGCCCTTTTTTTATGTTCTCAATCAAATATTCTCAGCTTTCTTCCTTATTTTAGTCCTGTTTTTACGCTGTTCTCTTTTGAACTTTAGCAGCACGCTGTTTGAAATTTGAACGTTATTGTAAAACAAGAGAAGTTAATATCGTGTGGGTCTTCTTTGGTTTTTCCCTCTGATTTCTATTTTCCACTTTGGTTGGTGAATTCAAATAATATTTTATAATTAAAGCCAACGTATTAAATATTAATCATCCGTTATTAAATAACATCAACATGCTCCAAAATAGGCCGTTTGTTA

mRNA sequence

TTCAGACAAATTAATTACCAATTATACCCTCCACCTTTAGATTTGTCTATTTGAACCTCTACACACACCCATATCTTTTGCATCCATTGCCAATTCCTATCTCTTTTCCCCCTTCCTTATCTCCTTCACATTGTCTTCTTCTTCCTCCTCCTTCCCCTTAAACACCGATCGACTTAAATTTCAACACAGAAAAACTGACATTTTTCTTTTACATCCGAGTTTCTTAAAAAGAAAAAGAAAAAGAAACTCTTTTTGCAACAGCCATGGCTTTTGCAGGAACCACCCAGAAATGCATGGCCTGCGACAAAACTGTCTATTTAGTCGACAAGCTCACTGCTGACAATCGTGTCTACCACAAAGCTTGCTTCCGCTGTCACCACTGCAATGGAACCCTTAAGCTAAGCAATTACAATTCGTTTGAAGGGGTGCTTTATTGTCGGCCACACTTCGATCAGCTCTTTAAAAGAACTGGAAGCTTAGACAAAAGCTTCGAAGGTATTCAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAATCGCTTTAAATCATTCACTCTCATCAGCTCGAGCCAACATTCTTTTGAACACCAAAGATTGGGAAACCGGAGAAACCGGCTGATTCTGAGGGATTACTCAAATGCATTTGACAGAAACCAACAGCGACTAAGGTTGCAAGCATGTTCATCGGTACTAAAGACAAGTGCCTTGGCTGTAAGAACACTGTTTATCCAACTGAGAAGAAGCACTGTTCTGAAGTGGGTAGTTGAAATAATTGTAAACTTTAAGACCATTTATGTTTCAGTGAATGGAACTTCGTACCATAAGAGCTGCTTCAAGTGCTGCCATGGCGGATGTACAATCAGCCCATCAAATTACATTGCACATGAAGGTCGACTTTACTGCAAACATCACCATACCCAACTCATCAAAGAAAAAGGAAACTTGAGCCAGCTGGAAGGAAGCCATTAAAGGACCTTACACTCGTAGGCCCTTTTTTTATGTTCTCAATCAAATATTCTCAGCTTTCTTCCTTATTTTAGTCCTGTTTTTACGCTGTTCTCTTTTGAACTTTAGCAGCACGCTGTTTGAAATTTGAACGTTATTGTAAAACAAGAGAAGTTAATATCGTGTGGGTCTTCTTTGGTTTTTCCCTCTGATTTCTATTTTCCACTTTGGTTGGTGAATTCAAATAATATTTTATAATTAAAGCCAACGTATTAAATATTAATCATCCGTTATTAAATAACATCAACATGCTCCAAAATAGGCCGTTTGTTA

Coding sequence (CDS)

ATGGCTTTTGCAGGAACCACCCAGAAATGCATGGCCTGCGACAAAACTGTCTATTTAGTCGACAAGCTCACTGCTGACAATCGTGTCTACCACAAAGCTTGCTTCCGCTGTCACCACTGCAATGGAACCCTTAAGCTAAGCAATTACAATTCGTTTGAAGGGGTGCTTTATTGTCGGCCACACTTCGATCAGCTCTTTAAAAGAACTGGAAGCTTAGACAAAAGCTTCGAAGGTATTCAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAATCGCTTTAAATCATTCACTCTCATCAGCTCGAGCCAACATTCTTTTGAACACCAAAGATTGGGAAACCGGAGAAACCGGCTGATTCTGAGGGATTACTCAAATGCATTTGACAGAAACCAACAGCGACTAAGGTTGCAAGCATGTTCATCGGTACTAAAGACAAGTGCCTTGGCTGTAAGAACACTGTTTATCCAACTGAGAAGAAGCACTGTTCTGAAGTGGGTAGTTGAAATAATTGTAAACTTTAAGACCATTTATGTTTCAGTGAATGGAACTTCGTACCATAAGAGCTGCTTCAAGTGCTGCCATGGCGGATGTACAATCAGCCCATCAAATTACATTGCACATGAAGGTCGACTTTACTGCAAACATCACCATACCCAACTCATCAAAGAAAAAGGAAACTTGAGCCAGCTGGAAGGAAGCCATTAA

Protein sequence

MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGIQKRERERERERERERERENRFKSFTLISSSQHSFEHQRLGNRRNRLILRDYSNAFDRNQQRLRLQACSSVLKTSALAVRTLFIQLRRSTVLKWVVEIIVNFKTIYVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGSH

Homology

[Close]

BLAST of CaUC05G100310 vs. NCBI nr
Match: TYK20140.1 (LIM domain-containing protein WLIM1 [Cucumis melo var. makuwa])

HSP 1 Score: 267.7 bits (683), Expect = 9.7e-68
Identity = 144/241 (59.75%), Postives = 156/241 (64.73%), Query Frame = 0


Query: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQLFKRTGSLDKSFEGIQKRERERERERERERERENRFKSFTLISSSQHSFEHQRLGN 120
           HFDQLFKRTGSLDKSFEG  K E+        E+  ++   + T ++S     + + LG 
Sbjct: 61  HFDQLFKRTGSLDKSFEGTPKIEKP-------EKPGDSEKPTATKVASMFIGTKDKCLG- 120

Query: 121 RRNRLILRDYSNAFDRNQQRLRLQACSSVLKTSALAVRTLFIQLRRSTVLKWVVEIIVNF 180
                                    C+  +                             +
Sbjct: 121 -------------------------CNKTV-----------------------------Y 179

Query: 181 KTIYVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGS 240
            T  VSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGS
Sbjct: 181 PTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGS 179

Query: 241 H 242
           H
Sbjct: 241 H 179

[Close]

BLAST of CaUC05G100310 vs. NCBI nr
Match: XP_038900157.1 (LIM domain-containing protein WLIM1 [Benincasa hispida])

HSP 1 Score: 265.0 bits (676), Expect = 6.3e-67
Identity = 143/241 (59.34%), Postives = 155/241 (64.32%), Query Frame = 0


Query: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQLFKRTGSLDKSFEGIQKRERERERERERERERENRFKSFTLISSSQHSFEHQRLGN 120
           HFDQLFKRTGSLDKSFEG  K  +        E+  ++   + T ++S     + + LG 
Sbjct: 61  HFDQLFKRTGSLDKSFEGTPKIGKP-------EKPADSEKPAATKLASMFVGTKDKCLG- 120

Query: 121 RRNRLILRDYSNAFDRNQQRLRLQACSSVLKTSALAVRTLFIQLRRSTVLKWVVEIIVNF 180
                                    C + +                             +
Sbjct: 121 -------------------------CKNTV-----------------------------Y 179

Query: 181 KTIYVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGS 240
            T  VSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGS
Sbjct: 181 PTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGS 179

Query: 241 H 242
           H
Sbjct: 241 H 179

[Close]

BLAST of CaUC05G100310 vs. NCBI nr
Match: XP_004141291.1 (LIM domain-containing protein WLIM1 [Cucumis sativus] >KGN55277.1 hypothetical protein Csa_012962 [Cucumis sativus])

HSP 1 Score: 265.0 bits (676), Expect = 6.3e-67
Identity = 143/241 (59.34%), Postives = 155/241 (64.32%), Query Frame = 0


Query: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQLFKRTGSLDKSFEGIQKRERERERERERERERENRFKSFTLISSSQHSFEHQRLGN 120
           HFDQLFKRTGSLDKSFEG  K  +        E+  ++   + T ++S     + + LG 
Sbjct: 61  HFDQLFKRTGSLDKSFEGTPKIGKP-------EKPGDSEKPTATKVASMFVGTKDKCLG- 120

Query: 121 RRNRLILRDYSNAFDRNQQRLRLQACSSVLKTSALAVRTLFIQLRRSTVLKWVVEIIVNF 180
                                    C+  +                             +
Sbjct: 121 -------------------------CNKTV-----------------------------Y 179

Query: 181 KTIYVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGS 240
            T  VSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGS
Sbjct: 181 PTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGS 179

Query: 241 H 242
           H
Sbjct: 241 H 179

[Close]

BLAST of CaUC05G100310 vs. NCBI nr
Match: XP_008452649.1 (PREDICTED: LIM domain-containing protein WLIM1 [Cucumis melo] >KAA0064449.1 LIM domain-containing protein WLIM1 [Cucumis melo var. makuwa])

HSP 1 Score: 265.0 bits (676), Expect = 6.3e-67
Identity = 143/241 (59.34%), Postives = 155/241 (64.32%), Query Frame = 0


Query: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQLFKRTGSLDKSFEGIQKRERERERERERERERENRFKSFTLISSSQHSFEHQRLGN 120
           HFDQLFKRTGSLDKSFEG  K  +        E+  ++   + T ++S     + + LG 
Sbjct: 61  HFDQLFKRTGSLDKSFEGTPKIGKP-------EKPGDSEKPTATKVASMFIGTKDKCLG- 120

Query: 121 RRNRLILRDYSNAFDRNQQRLRLQACSSVLKTSALAVRTLFIQLRRSTVLKWVVEIIVNF 180
                                    C+  +                             +
Sbjct: 121 -------------------------CNKTV-----------------------------Y 179

Query: 181 KTIYVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGS 240
            T  VSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGS
Sbjct: 181 PTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGS 179

Query: 241 H 242
           H
Sbjct: 241 H 179

[Close]

BLAST of CaUC05G100310 vs. NCBI nr
Match: KAG6591426.1 (LIM domain-containing protein WLIM1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 261.5 bits (667), Expect = 7.0e-66
Identity = 141/241 (58.51%), Postives = 152/241 (63.07%), Query Frame = 0


Query: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHC GTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQLFKRTGSLDKSFEGIQKRERERERERERERERENRFKSFTLISSSQHSFEHQRLGN 120
           HFDQLFKRTGSLDKSFEG  K  +    E+  + ER    K  ++   ++          
Sbjct: 61  HFDQLFKRTGSLDKSFEGTPKIGKP---EKPADSERPTATKVASMFVGTKD--------- 120

Query: 121 RRNRLILRDYSNAFDRNQQRLRLQACSSVLKTSALAVRTLFIQLRRSTVLKWVVEIIVNF 180
                                +   C + +                             +
Sbjct: 121 ---------------------KCLGCKNTV-----------------------------Y 179

Query: 181 KTIYVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGS 240
            T  VSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGS
Sbjct: 181 PTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGS 179

Query: 241 H 242
           H
Sbjct: 241 H 179

[Close]

BLAST of CaUC05G100310 vs. ExPASy Swiss-Prot
Match: Q94JX5 (LIM domain-containing protein WLIM1 OS=Arabidopsis thaliana OX=3702 GN=WLIM1 PE=1 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.2e-63
Identity = 140/246 (56.91%), Postives = 147/246 (59.76%), Query Frame = 0


Query: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHC GTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQLFKRTGSLDKSFEG---IQKRERERERERERERERENRFKSFTLISSSQHSFEHQR 120
           HFDQ FKRTGSL+KSFEG   I K +R  E ER    +  N F                 
Sbjct: 61  HFDQNFKRTGSLEKSFEGTPKIGKPDRPLEGERPAGTKVSNMF----------------- 120

Query: 121 LGNRRNRLILRDYSNAFDRNQQRLRLQACSSVLKTSALAVRTLFIQLRRSTVLKWVVEII 180
            G  R + +  D                                                
Sbjct: 121 -GGTREKCVGCD------------------------------------------------ 177

Query: 181 VNFKTIY----VSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGN 240
              KT+Y    VSVNGT YHKSCFKC HGGCTISPSNYIAHEG+LYCKHHH QLIKEKGN
Sbjct: 181 ---KTVYPIEKVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGN 177

[Close]

BLAST of CaUC05G100310 vs. ExPASy Swiss-Prot
Match: P29675 (Pollen-specific protein SF3 OS=Helianthus annuus OX=4232 GN=SF3 PE=2 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.8e-56
Identity = 122/237 (51.48%), Postives = 142/237 (59.92%), Query Frame = 0


Query: 2   AFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPH 61
           +F GTTQKC  C+KTVYLVDKL A+ RVYHKACFRCHHCN TLKLSN+NSF+GV+YCR H
Sbjct: 3   SFTGTTQKCTVCEKTVYLVDKLVANQRVYHKACFRCHHCNSTLKLSNFNSFDGVVYCRHH 62

Query: 62  FDQLFKRTGSLDKSFEGIQKRERERERERERERERENRFKSFTLISSSQHSFEHQRLGNR 121
           FDQLFKRTGSL+KSF+G  K   + ER   +E +  NR  SF         FE       
Sbjct: 63  FDQLFKRTGSLEKSFDGTPK--FKPERTFSQETQSANRLSSF---------FEG------ 122

Query: 122 RNRLILRDYSNAFDRNQQRLRLQACSSVLKTSALAVRTLFIQLRRSTVLKWVVEIIVNFK 181
                 RD  N            AC+ ++                             + 
Sbjct: 123 -----TRDKCN------------ACAKIV-----------------------------YP 176

Query: 182 TIYVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLE 239
              V V+GT+YH++CFKCCHGGCTISPSNYIAHEGRLYCKHHH QL K+KGN SQLE
Sbjct: 183 IERVKVDGTAYHRACFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLFKKKGNYSQLE 176

[Close]

BLAST of CaUC05G100310 vs. ExPASy Swiss-Prot
Match: O04193 (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.1e-37
Identity = 94/237 (39.66%), Postives = 117/237 (49.37%), Query Frame = 0


Query: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
           M+F GT QKC AC+KTVY V+ L+AD   YHKACF+C HC   L+LSNY+S EGV+YCRP
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFDQLFKRTGSLDKSFEGIQKRERERERERERERERENRFKSFTLISSSQHSFEHQRLGN 120
           HF+QLFK +GS  K+F+   K   ++                               L  
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPLTDKPT---------------------------PELNR 120

Query: 121 RRNRLILRDYSNAFDRNQQRLRLQACSSVLKTSALAVRTLFIQLRRSTVLKWVVEIIVNF 180
             +RL     +  F   Q +     C++  KT                           +
Sbjct: 121 TPSRL-----AGMFSGTQDK-----CATCTKTV--------------------------Y 174

Query: 181 KTIYVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQL 238
               V+V    YHKSCFKC HGGC ISPSNY A EG LYCKHH  QL KEKG+ + L
Sbjct: 181 PIEKVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHL 174

[Close]

BLAST of CaUC05G100310 vs. ExPASy Swiss-Prot
Match: Q9M047 (LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B PE=1 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 5.4e-37
Identity = 92/237 (38.82%), Postives = 118/237 (49.79%), Query Frame = 0


Query: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
           M+F GT QKC AC+KTVY V+ L+AD   YHK+CF+C HC   L+LS+Y+S EGVLYC+P
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFDQLFKRTGSLDKSFEGIQKRERERERERERERERENRFKSFTLISSSQHSFEHQRLGN 120
           HF+QLFK +GS +K+F+   K   +   E  R   R                        
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSR------------------------ 120

Query: 121 RRNRLILRDYSNAFDRNQQRLRLQACSSVLKTSALAVRTLFIQLRRSTVLKWVVEIIVNF 180
                     +  F   Q++     C++  KT                           +
Sbjct: 121 ---------VAGRFSGTQEK-----CATCSKTV--------------------------Y 173

Query: 181 KTIYVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQL 238
               V+V   +YHKSCFKC HGGC ISPSNY A EG LYCKHH  QL KEKG+ + L
Sbjct: 181 PIEKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHL 173

[Close]

BLAST of CaUC05G100310 vs. ExPASy Swiss-Prot
Match: Q500W4 (LIM domain-containing protein PLIM2c OS=Arabidopsis thaliana OX=3702 GN=PLIM2C PE=1 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 4.3e-34
Identity = 83/236 (35.17%), Postives = 117/236 (49.58%), Query Frame = 0


Query: 2   AFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRPH 61
           AF GTT KC ACDKTVY++D +T +   YHK+CFRC HCNGTL + NY+S +GVLYC+ H
Sbjct: 3   AFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLYCKTH 62

Query: 62  FDQLFKRTGSLDKSFEGIQKRERERERERERERERENRFKSFTLISSSQHSFEHQRLGNR 121
           F+QLFK +G+  K+F+   K E+  +  +       NR  SF                  
Sbjct: 63  FEQLFKESGNFSKNFQTAGKTEKSNDATK-----APNRLSSF------------------ 122

Query: 122 RNRLILRDYSNAFDRNQQRLRLQACSSVLKTSALAVRTLFIQLRRSTVLKWVVEIIVNFK 181
                   +S   D+         C++  KT                           + 
Sbjct: 123 --------FSGTQDK---------CAACKKTV--------------------------YP 172

Query: 182 TIYVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQL 238
              +++ G SYHK+CF+C H GC ++ S+Y A +G LYCK H +QL  EKGN + +
Sbjct: 183 LEKMTMEGESYHKTCFRCAHSGCPLTHSSYAALDGVLYCKVHFSQLFLEKGNYNHV 172

[Close]

BLAST of CaUC05G100310 vs. ExPASy TrEMBL
Match: A0A5D3D9H2 (LIM domain-containing protein WLIM1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002660 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 4.7e-68
Identity = 144/241 (59.75%), Postives = 156/241 (64.73%), Query Frame = 0


Query: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQLFKRTGSLDKSFEGIQKRERERERERERERERENRFKSFTLISSSQHSFEHQRLGN 120
           HFDQLFKRTGSLDKSFEG  K E+        E+  ++   + T ++S     + + LG 
Sbjct: 61  HFDQLFKRTGSLDKSFEGTPKIEKP-------EKPGDSEKPTATKVASMFIGTKDKCLG- 120

Query: 121 RRNRLILRDYSNAFDRNQQRLRLQACSSVLKTSALAVRTLFIQLRRSTVLKWVVEIIVNF 180
                                    C+  +                             +
Sbjct: 121 -------------------------CNKTV-----------------------------Y 179

Query: 181 KTIYVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGS 240
            T  VSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGS
Sbjct: 181 PTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGS 179

Query: 241 H 242
           H
Sbjct: 241 H 179

[Close]

BLAST of CaUC05G100310 vs. ExPASy TrEMBL
Match: A0A5A7VG01 (LIM domain-containing protein WLIM1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G001620 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 3.1e-67
Identity = 143/241 (59.34%), Postives = 155/241 (64.32%), Query Frame = 0


Query: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQLFKRTGSLDKSFEGIQKRERERERERERERERENRFKSFTLISSSQHSFEHQRLGN 120
           HFDQLFKRTGSLDKSFEG  K  +        E+  ++   + T ++S     + + LG 
Sbjct: 61  HFDQLFKRTGSLDKSFEGTPKIGKP-------EKPGDSEKPTATKVASMFIGTKDKCLG- 120

Query: 121 RRNRLILRDYSNAFDRNQQRLRLQACSSVLKTSALAVRTLFIQLRRSTVLKWVVEIIVNF 180
                                    C+  +                             +
Sbjct: 121 -------------------------CNKTV-----------------------------Y 179

Query: 181 KTIYVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGS 240
            T  VSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGS
Sbjct: 181 PTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGS 179

Query: 241 H 242
           H
Sbjct: 241 H 179

[Close]

BLAST of CaUC05G100310 vs. ExPASy TrEMBL
Match: A0A0A0L3T9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G643070 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 3.1e-67
Identity = 143/241 (59.34%), Postives = 155/241 (64.32%), Query Frame = 0


Query: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQLFKRTGSLDKSFEGIQKRERERERERERERERENRFKSFTLISSSQHSFEHQRLGN 120
           HFDQLFKRTGSLDKSFEG  K  +        E+  ++   + T ++S     + + LG 
Sbjct: 61  HFDQLFKRTGSLDKSFEGTPKIGKP-------EKPGDSEKPTATKVASMFVGTKDKCLG- 120

Query: 121 RRNRLILRDYSNAFDRNQQRLRLQACSSVLKTSALAVRTLFIQLRRSTVLKWVVEIIVNF 180
                                    C+  +                             +
Sbjct: 121 -------------------------CNKTV-----------------------------Y 179

Query: 181 KTIYVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGS 240
            T  VSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGS
Sbjct: 181 PTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGS 179

Query: 241 H 242
           H
Sbjct: 241 H 179

[Close]

BLAST of CaUC05G100310 vs. ExPASy TrEMBL
Match: A0A1S3BUC8 (LIM domain-containing protein WLIM1 OS=Cucumis melo OX=3656 GN=LOC103493607 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 3.1e-67
Identity = 143/241 (59.34%), Postives = 155/241 (64.32%), Query Frame = 0


Query: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQLFKRTGSLDKSFEGIQKRERERERERERERERENRFKSFTLISSSQHSFEHQRLGN 120
           HFDQLFKRTGSLDKSFEG  K  +        E+  ++   + T ++S     + + LG 
Sbjct: 61  HFDQLFKRTGSLDKSFEGTPKIGKP-------EKPGDSEKPTATKVASMFIGTKDKCLG- 120

Query: 121 RRNRLILRDYSNAFDRNQQRLRLQACSSVLKTSALAVRTLFIQLRRSTVLKWVVEIIVNF 180
                                    C+  +                             +
Sbjct: 121 -------------------------CNKTV-----------------------------Y 179

Query: 181 KTIYVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGS 240
            T  VSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGS
Sbjct: 181 PTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEGS 179

Query: 241 H 242
           H
Sbjct: 241 H 179

[Close]

BLAST of CaUC05G100310 vs. ExPASy TrEMBL
Match: A0A6J1CLL5 (LIM domain-containing protein WLIM1 OS=Momordica charantia OX=3673 GN=LOC111012728 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 3.4e-66
Identity = 142/242 (58.68%), Postives = 155/242 (64.05%), Query Frame = 0


Query: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHC GTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQLFKRTGSLDKSFEGIQKRERERERERERERERENRFKS-FTLISSSQHSFEHQRLG 120
           HFDQ+FKRTGSLDKSFEG  K  +        E+  ++  KS  T ++S     + + LG
Sbjct: 61  HFDQIFKRTGSLDKSFEGTPKIGKP-------EKPADSEMKSAATKVASMFAGTKDKCLG 120

Query: 121 NRRNRLILRDYSNAFDRNQQRLRLQACSSVLKTSALAVRTLFIQLRRSTVLKWVVEIIVN 180
                                     C + +                             
Sbjct: 121 --------------------------CKNTV----------------------------- 180

Query: 181 FKTIYVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEG 240
           + T  VSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEG
Sbjct: 181 YPTEKVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQLEG 180

Query: 241 SH 242
           +H
Sbjct: 241 TH 180

[Close]

BLAST of CaUC05G100310 vs. TAIR 10
Match: AT1G10200.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 244.6 bits (623), Expect = 8.2e-65
Identity = 140/246 (56.91%), Postives = 147/246 (59.76%), Query Frame = 0


Query: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHC GTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQLFKRTGSLDKSFEG---IQKRERERERERERERERENRFKSFTLISSSQHSFEHQR 120
           HFDQ FKRTGSL+KSFEG   I K +R  E ER    +  N F                 
Sbjct: 61  HFDQNFKRTGSLEKSFEGTPKIGKPDRPLEGERPAGTKVSNMF----------------- 120

Query: 121 LGNRRNRLILRDYSNAFDRNQQRLRLQACSSVLKTSALAVRTLFIQLRRSTVLKWVVEII 180
            G  R + +  D                                                
Sbjct: 121 -GGTREKCVGCD------------------------------------------------ 177

Query: 181 VNFKTIY----VSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGN 240
              KT+Y    VSVNGT YHKSCFKC HGGCTISPSNYIAHEG+LYCKHHH QLIKEKGN
Sbjct: 181 ---KTVYPIEKVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGN 177

[Close]

BLAST of CaUC05G100310 vs. TAIR 10
Match: AT3G55770.7 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 161.4 bits (407), Expect = 9.1e-40
Identity = 99/248 (39.92%), Postives = 132/248 (53.23%), Query Frame = 0


Query: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
           M+F GT QKC AC+KTVY V+ L+AD   YHK+CF+C HC   L+LS+Y+S EGVLYC+P
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFDQLFKRTGSLDKSFEGIQKRERERERERERERERENRFKSFTLISSSQHSFEHQRLGN 120
           HF+QLFK +GS +K+F+   K   +   E  R   R                        
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSR------------------------ 120

Query: 121 RRNRLILRDYSNAFDRNQQRLRLQACSSVLKT--------SALAVRTLFIQLRRSTVLKW 180
                     +  F   Q++     C++  KT        + L+ R L    R+  VL  
Sbjct: 121 ---------VAGRFSGTQEK-----CATCSKTVYPIEKIHNPLSYREL---ARKPNVLHR 180

Query: 181 VV---EIIVNFKTIYVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIK 238
            +   +I   +  ++V+V   +YHKSCFKC HGGC ISPSNY A EG LYCKHH  QL K
Sbjct: 181 CIDPGDIGSCYFNLHVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFK 207

[Close]

BLAST of CaUC05G100310 vs. TAIR 10
Match: AT2G39900.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 158.3 bits (399), Expect = 7.7e-39
Identity = 94/237 (39.66%), Postives = 117/237 (49.37%), Query Frame = 0


Query: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
           M+F GT QKC AC+KTVY V+ L+AD   YHKACF+C HC   L+LSNY+S EGV+YCRP
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFDQLFKRTGSLDKSFEGIQKRERERERERERERERENRFKSFTLISSSQHSFEHQRLGN 120
           HF+QLFK +GS  K+F+   K   ++                               L  
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPLTDKPT---------------------------PELNR 120

Query: 121 RRNRLILRDYSNAFDRNQQRLRLQACSSVLKTSALAVRTLFIQLRRSTVLKWVVEIIVNF 180
             +RL     +  F   Q +     C++  KT                           +
Sbjct: 121 TPSRL-----AGMFSGTQDK-----CATCTKTV--------------------------Y 174

Query: 181 KTIYVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQL 238
               V+V    YHKSCFKC HGGC ISPSNY A EG LYCKHH  QL KEKG+ + L
Sbjct: 181 PIEKVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHL 174

[Close]

BLAST of CaUC05G100310 vs. TAIR 10
Match: AT3G55770.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 156.0 bits (393), Expect = 3.8e-38
Identity = 92/237 (38.82%), Postives = 118/237 (49.79%), Query Frame = 0


Query: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
           M+F GT QKC AC+KTVY V+ L+AD   YHK+CF+C HC   L+LS+Y+S EGVLYC+P
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFDQLFKRTGSLDKSFEGIQKRERERERERERERERENRFKSFTLISSSQHSFEHQRLGN 120
           HF+QLFK +GS +K+F+   K   +   E  R   R                        
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSR------------------------ 120

Query: 121 RRNRLILRDYSNAFDRNQQRLRLQACSSVLKTSALAVRTLFIQLRRSTVLKWVVEIIVNF 180
                     +  F   Q++     C++  KT                           +
Sbjct: 121 ---------VAGRFSGTQEK-----CATCSKTV--------------------------Y 173

Query: 181 KTIYVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQL 238
               V+V   +YHKSCFKC HGGC ISPSNY A EG LYCKHH  QL KEKG+ + L
Sbjct: 181 PIEKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHL 173

[Close]

BLAST of CaUC05G100310 vs. TAIR 10
Match: AT3G55770.2 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 156.0 bits (393), Expect = 3.8e-38
Identity = 92/237 (38.82%), Postives = 118/237 (49.79%), Query Frame = 0


Query: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCNGTLKLSNYNSFEGVLYCRP 60
           M+F GT QKC AC+KTVY V+ L+AD   YHK+CF+C HC   L+LS+Y+S EGVLYC+P
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFDQLFKRTGSLDKSFEGIQKRERERERERERERERENRFKSFTLISSSQHSFEHQRLGN 120
           HF+QLFK +GS +K+F+   K   +   E  R   R                        
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSR------------------------ 120

Query: 121 RRNRLILRDYSNAFDRNQQRLRLQACSSVLKTSALAVRTLFIQLRRSTVLKWVVEIIVNF 180
                     +  F   Q++     C++  KT                           +
Sbjct: 121 ---------VAGRFSGTQEK-----CATCSKTV--------------------------Y 173

Query: 181 KTIYVSVNGTSYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHTQLIKEKGNLSQL 238
               V+V   +YHKSCFKC HGGC ISPSNY A EG LYCKHH  QL KEKG+ + L
Sbjct: 181 PIEKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHL 173

The following BLAST results are available for this feature:

BLAST of CaUC05G100310 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK20140.1	9.7e-68	59.75	LIM domain-containing protein WLIM1 [Cucumis melo var. makuwa]	[more]
XP_038900157.1	6.3e-67	59.34	LIM domain-containing protein WLIM1 [Benincasa hispida]	[more]
XP_004141291.1	6.3e-67	59.34	LIM domain-containing protein WLIM1 [Cucumis sativus] >KGN55277.1 hypothetical p...	[more]
XP_008452649.1	6.3e-67	59.34	PREDICTED: LIM domain-containing protein WLIM1 [Cucumis melo] >KAA0064449.1 LIM ...	[more]
KAG6591426.1	7.0e-66	58.51	LIM domain-containing protein WLIM1, partial [Cucurbita argyrosperma subsp. soro...	[more]

BLAST of CaUC05G100310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94JX5	1.2e-63	56.91	LIM domain-containing protein WLIM1 OS=Arabidopsis thaliana OX=3702 GN=WLIM1 PE=...	[more]
P29675	1.8e-56	51.48	Pollen-specific protein SF3 OS=Helianthus annuus OX=4232 GN=SF3 PE=2 SV=1	[more]
O04193	1.1e-37	39.66	LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A P...	[more]
Q9M047	5.4e-37	38.82	LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B P...	[more]
Q500W4	4.3e-34	35.17	LIM domain-containing protein PLIM2c OS=Arabidopsis thaliana OX=3702 GN=PLIM2C P...	[more]

BLAST of CaUC05G100310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D9H2	4.7e-68	59.75	LIM domain-containing protein WLIM1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A5A7VG01	3.1e-67	59.34	LIM domain-containing protein WLIM1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A0A0L3T9	3.1e-67	59.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G643070 PE=4 SV=1	[more]
A0A1S3BUC8	3.1e-67	59.34	LIM domain-containing protein WLIM1 OS=Cucumis melo OX=3656 GN=LOC103493607 PE=4...	[more]
A0A6J1CLL5	3.4e-66	58.68	LIM domain-containing protein WLIM1 OS=Momordica charantia OX=3673 GN=LOC1110127...	[more]

BLAST of CaUC05G100310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10200.1	8.2e-65	56.91	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.7	9.1e-40	39.92	GATA type zinc finger transcription factor family protein	[more]
AT2G39900.1	7.7e-39	39.66	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.1	3.8e-38	38.82	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.2	3.8e-38	38.82	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 79..99
None	No IPR available	GENE3D	2.10.110.10	Cysteine Rich Protein	coord: 4..74 e-value: 1.9E-19 score: 71.6 coord: 177..236 e-value: 1.5E-12 score: 49.5
None	No IPR available	PANTHER	PTHR24206:SF92	GATA TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 180..241
None	No IPR available	PANTHER	PTHR24206	OS06G0237300 PROTEIN	coord: 180..241
None	No IPR available	PANTHER	PTHR24206:SF92	GATA TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 1..101
None	No IPR available	PANTHER	PTHR24206	OS06G0237300 PROTEIN	coord: 1..101
None	No IPR available	CDD	cd09440	LIM1_SF3	coord: 6..68 e-value: 4.376E-41 score: 133.359
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 198..237
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 36..76
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 3..35
IPR001781	Zinc finger, LIM-type	SMART	SM00132	lim_4	coord: 9..61 e-value: 3.2E-11 score: 53.3 coord: 175..223 e-value: 1.2E-5 score: 34.8
IPR001781	Zinc finger, LIM-type	PFAM	PF00412	LIM	coord: 182..226 e-value: 5.6E-9 score: 36.1 coord: 10..64 e-value: 3.5E-10 score: 39.9
IPR001781	Zinc finger, LIM-type	PROSITE	PS00478	LIM_DOMAIN_1	coord: 10..44
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 8..68 score: 13.305699
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 141..230 score: 8.9497

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC05G100310.1	CaUC05G100310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0005488	binding