CaUC05G099080 (gene) Watermelon (USVL246-FR2) v1
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Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGATCTTTATCGATGCATGAATCTAGACATAAATCCATATCAAGCTCATACCAAGATGACTCATCCATTTTCAACGTCTTCTGGGAGAGGTCTATGCCAAGGTGATAGGTTATTTTATCGAGTCAACTTATTCGAGGTTGAGAGAGGTTTTGATCTAGGTGGTGGGTTTTGTTGCTGAGTCGACGTGTCCAAACTAAGCCAACTTGCAAGGGAGAAATTCTCACCAATGTAGAATTTTTCCATCACACACTTAGATGCATAAGTGAGTATTAGATTAGATTATGAGTTGAACTAGGTGAAATTGTTTTATACATAACTGTAGTTTGATTAATATAGTATTATTATTAAAACTTACCGCAACACTACCAACTAGAAGTAGTTTGTAATAGCCAATTTGTGTAATCATTACTTAGTTTTAATTACAATATACTTTTATTAAAAAAGAAAAAATATATATATATATAAATATATTTTGTGCGAAGTGTTTGGGACTGATGAGCGAATATCAGGGGGAGGCCTTCGCCGGATCGCGCTGAACTTTTGGAGAGCAAAGCAACAGCGGAAGAGAGCAACGATGACGGTGTTTCATTTCTTCAACTGTGCGATTCTCACTTTCGGTCCTCATGCTGTCTACTACTCTGCAACGCCCTTGTAAATGGATGATCTTTATCGATGCATGAATCTAGACATAAATCCATATCAAGCTCATACCAAGATGACTCATCCATTTTCAACGTCTTCTGGGAGAGGTCTATGCCAAGGGGGAGGCCTTCGCCGGATCGCGCTGAACTTTTGGAGAGCAAAGCAACAGCGGAAGAGAGCAACGATGACGGTGTTTCATTTCTTCAACTGTGCGATTCTCACTTTCGGTCCTCATGCTGTCTACTACTCTGCAACGCCCTTGTAA ATGGATGATCTTTATCGATGCATGAATCTAGACATAAATCCATATCAAGCTCATACCAAGATGACTCATCCATTTTCAACGTCTTCTGGGAGAGGTCTATGCCAAGGGGGAGGCCTTCGCCGGATCGCGCTGAACTTTTGGAGAGCAAAGCAACAGCGGAAGAGAGCAACGATGACGGTGTTTCATTTCTTCAACTGTGCGATTCTCACTTTCGGTCCTCATGCTGTCTACTACTCTGCAACGCCCTTGTAA MDDLYRCMNLDINPYQAHTKMTHPFSTSSGRGLCQGGGLRRIALNFWRAKQQRKRATMTVFHFFNCAILTFGPHAVYYSATPL Homology
BLAST of CaUC05G099080 vs. NCBI nr
Match: XP_018846615.1 (transmembrane protein 147-like [Juglans regia] >KAF5468346.1 hypothetical protein F2P56_012504 [Juglans regia]) HSP 1 Score: 67.8 bits (164), Expect = 5.1e-08 Identity = 29/42 (69.05%), Postives = 35/42 (83.33%), Query Frame = 0
BLAST of CaUC05G099080 vs. NCBI nr
Match: RYR41456.1 (hypothetical protein Ahy_A08g037851 isoform A [Arachis hypogaea]) HSP 1 Score: 66.2 bits (160), Expect = 1.5e-07 Identity = 28/36 (77.78%), Postives = 33/36 (91.67%), Query Frame = 0
BLAST of CaUC05G099080 vs. NCBI nr
Match: RYR41454.1 (hypothetical protein Ahy_A08g037851 isoform C [Arachis hypogaea]) HSP 1 Score: 66.2 bits (160), Expect = 1.5e-07 Identity = 28/36 (77.78%), Postives = 33/36 (91.67%), Query Frame = 0
BLAST of CaUC05G099080 vs. NCBI nr
Match: PNY07985.1 (transmembrane protein 147-like protein, partial [Trifolium pratense]) HSP 1 Score: 64.7 bits (156), Expect = 4.3e-07 Identity = 29/31 (93.55%), Postives = 29/31 (93.55%), Query Frame = 0
BLAST of CaUC05G099080 vs. NCBI nr
Match: KAA3488848.1 (transmembrane protein 147-like protein [Gossypium australe]) HSP 1 Score: 64.3 bits (155), Expect = 5.6e-07 Identity = 31/43 (72.09%), Postives = 34/43 (79.07%), Query Frame = 0
BLAST of CaUC05G099080 vs. ExPASy TrEMBL
Match: A0A2I4GRU0 (Transmembrane protein 147 OS=Juglans regia OX=51240 GN=LOC109010292 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 2.5e-08 Identity = 29/42 (69.05%), Postives = 35/42 (83.33%), Query Frame = 0
BLAST of CaUC05G099080 vs. ExPASy TrEMBL
Match: A0A445BS37 (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase OS=Arachis hypogaea OX=3818 GN=Ahy_A08g037851 PE=3 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 7.2e-08 Identity = 28/36 (77.78%), Postives = 33/36 (91.67%), Query Frame = 0
BLAST of CaUC05G099080 vs. ExPASy TrEMBL
Match: A0A445BRZ0 (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase OS=Arachis hypogaea OX=3818 GN=Ahy_A08g037851 PE=3 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 7.2e-08 Identity = 28/36 (77.78%), Postives = 33/36 (91.67%), Query Frame = 0
BLAST of CaUC05G099080 vs. ExPASy TrEMBL
Match: A0A2K3NY70 (Transmembrane protein 147 (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g004494 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 2.1e-07 Identity = 29/31 (93.55%), Postives = 29/31 (93.55%), Query Frame = 0
BLAST of CaUC05G099080 vs. ExPASy TrEMBL
Match: A0A5B6X4R7 (Transmembrane protein 147 OS=Gossypium australe OX=47621 GN=EPI10_032553 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 2.7e-07 Identity = 31/43 (72.09%), Postives = 34/43 (79.07%), Query Frame = 0
BLAST of CaUC05G099080 vs. TAIR 10
Match: AT1G47640.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2053, membrane (InterPro:IPR019164); Has 204 Blast hits to 204 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 127; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). ) HSP 1 Score: 58.9 bits (141), Expect = 2.2e-09 Identity = 25/26 (96.15%), Postives = 26/26 (100.00%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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