CaUC05G096540 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC05G096540
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionHistone deacetylase-like protein
LocationCiama_Chr05: 27750562 .. 27755348 (-)
RNA-Seq ExpressionCaUC05G096540
SyntenyCaUC05G096540
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTTAAGAATCAACTGTTCATCTTCTTCAGTTTTTCTCCTTCCTCAAGCTCCCGATTCAAATTCCTTCGATTCTACAAAAACCGCTCAATTATCTGTGTAAGTCTCGATCAATTCAACTTCATCTTTATCGATTTTACGTTCAATGACGAAGCGATCTGTTTTTACTGTTTTTTCCACTTCATCTTTATGGATTCAACGTTCAGTGACAAATTGATCTGTTTTGACTGTTTTTTCCACTTCATCTTTATCGATTCTACGTTCAATGAAGAATCGATCTGTTTTACTGTTTTTTCCACTTCATCTCTATCGATTTTACGTCCAATGACGAATCGATCTATTTGACTGTTTTTTCAACTTCGGTTTCTCGATTAACTGCAGGAAGGAAGATGAAGGATCATGGAGAAGCCGAAGCGTATGCGCTTTAGGTTTAGCGAGCTTGATTTTCGCAATCGAACTCGGCGATGTCTTCGTGGCTAGTGAATCTCTGGCTCTGGAATCGCCGCCGCAACTTGTGGATTATTCGAGGAGGCGTGTGAAGATCTCGAGATGGAGCGATACAAGAAAATGCGCTCCATGGCGAGCCAATTCATTCGAGATCATCGTACCTGAGAACCTTCCCAGGCCGTCGCATCGCCGGAATTGGGAGGCAGTTGCATTTACATTCATGGATGTGAAGAACGCTCCGGGAATTCAAGTAACTTCTTCTAAAACTAGCTCCCATTACTGTTTCTCTTTGTAAATATCTATGGCTTTTGTTTTGTAAGTCGTGTTATCAATCACATCAATGGCGATCCAATCCAACGTAAATAATTTTGGTTATAGGCAAAATTGAACAAAAGAAAAGATCTAGTTGAATTGAGATGTAATGCAGTAGTACAGATTGGCATTATTCAGGTTGAAGAGGCATTGTATGTAGTACATGCAGTACAGGCTATGTGTATTAGAAAAGTTTGGTGATCTTTCATTTTCATGGTTTGTACTCGCAATACATTCAGGCATGGGCGGCCCAATAATGTTTGGGCCGCTGCTCTAAATTACAATATTTGCTATTTCATCCCATTTCCCATTAAAATATCCTATTTGTCCCTTAGACTATGATATTTTGCTATTATTTGATATCTATTATTTTTTTTATAAAAAAAAAATTGCGGTTTACTTTTTAAAAAACTAAGTCAAATTTTGGAACCTAAAAAATAGTTTTAATAAACATTTTTGTTTTTAGAATTATGTTAAGAATTCAAGTATTTATTTATGAAAAAATTGAAAACATGATTGAAAATATGTGAGAAAATAAGTACTTACATGAAAAATCTCCTTGGGCCATATATTTCATAGATGTCTATAAAGATAGATATATACAAATATTCTATTGTATATTTGATATATATGTAGAGGAAACCGATTGAATATACAATATATATACATGATATCACACTTATCTGTATTATACCCAGATCATTTGAAATATATTCTTAACGTAATCAAAACCACTAGGACATATTCAACTATATTTAAACAACAATATATATTTAAGCAACTGTAGTAGATAGTATTGCAGCAACTGCCACTAGTTTTTTTTTTGCTCTTTCGACAACGATTTCAATTGAAGAAATAGACTGAGGTTGAAGAATATTTTTTTGAGACTTTTGAAAGAGAAACTATTGAAGAATAAGAGATATGAGATTTGAAGGGCAAGAAGAAGATGATGAAAGAGATACCATGAAGATTCAAGGGATGAGTTTCCACTTTTGGCCTCGCATGTGGAACTCCTCACCAGATCTCACTGGAGTTGATGTCGGGGAATCGAATATTTTGTAACAAAGTTTTCAGCAGTGGTGCCATTGCAACAACAACCATCATTGCCCATTTGGAAGTTGAAGAAGATTCCTAAAGAAAAATGAGGATGCTCATACGGAAGAAGAAGGGAGAATTTTTCAGTGGGATTTGGATTAGGAATTGGGAATTTGGAGAGGGGGTGAGCGAGAAAAATGGAGGATTCAAATGGTTCTTCAGTTTTTAAAAAAGGAATATTAATGAGTGCATGAATACGTGAAACCCTATACTACGCATGGATGGGGAAGATATACAAAACCCTAGGCTAATTTTTTCAAAATAAATGGAGTATGGAAGACGTTAGGGTAATATGGGTCTCCAATTGAGACATTCTACGTAAAAAAAACTCATCTCAAAAACCACAATCCAAGTTGGATGATCGTAGTCGAACTCATTTTCTTTAAATTTTTGTTAATATATTTTTTCATGAGTACAATAGAGGTAGGGAGATTTGATCACTAACACGTTTAGATACTAGTTGAGCTATGCTCACTTTTTATTGATCAAAAGGTCAATCAATAGTGAATGAATACATTAATTAATATCTCAAAAGTTGATGGTTCAACTCTCACCCTTTAGTAATCATTCAATTTTTTAAAAAAAAAAAAAATGATCGAAGTTACCCTGGCAGATCATTCAAAAAAAAAAAAATTCCCCAAAAAAGTTTCTTACATCACTTTCAAAACATGATGTTTCATATGTTCTTTAAGTTTGAAGTACTTTTTGTCATTAAAGACAAAATTACTTTTCATAATGCTCTCTAATCTATTTATCTAAAAATACATCGAAGAACTCTTTCGGAATGCGTCTTTTGAAGCTCAAGTGATGATTATATTTATCTTTTTCACTTTATAGTGTTTTAGCCCATATGGAGAGTAAGATAAGCTCAATTACTATATCTTAGTCTAATTGAATTGTTAATGTTAATATAGGTTTCTCAAAACATAATTTTAAGTACTAGTTGTTAATGTTAATGAGACATGGTGGAATCGAAGATGCACTTTCTATCTCAAATCACACAGTAATCTTGTTTCTTCTATCTCGCAAATTCTTAATTTGTTTTAAATGAAGAATTTCTTCTCTTTTTGAGGTAAAGATGATGTTAGAATTTTCATTATTTTTACATGGTTGATGAGAAAAAGTATAGATGATCTAATTTGCAAGCACATGCCATAACATTGTCATGTAACATATACATATACCACCAATATTTTCAATCCTCTTAGAATATTTTACACTATTTCAACCCAACAATAAGAGGTAACAATATTAATTGAGGGACTTTTTTTTCTTCTAAACCTTCCAATCTGATTCTGAGAATATTCTGCAAAATTTTGATAATTCTCATGCTATGAAATTTAAAATAAAATGGAAAATTTGTTGCAAATAAATGTATTTTTGGCATCATTATTTGCTCAATTGATTATTATAATGATTCTATTGAGTTTATTAATAGATCTGTTATAGGCTAATTCGACAAAGCAACCAATGGCTTCTCCTCCATAAGACCATACATAGTGATATTATTTCCTATTCACAGTTTCGGGTATATATGTCATGTCCTGCAACTCAATCTATAACTTGATAGCCTTGTGAAGAATGAATAGACATAGCATAGGTTACAAAGTAAAAGGAAGAATGTTGCCAATTATTCAATACGGAATTCCCAACAAATCCCAAATCAAGAGGCAAAACAGACATTTAAAGTATGAAATACTAAGGATAGGGTCAAAAGGAAGGATGGCAAGAGTCAAAGAAGGTCAAAGGAGAAAACGATCCATACCACACTACTCGGCCTCAACCCAAGTGAGGGCTGAGCCTAAAGAAACTCAAAGGGGAAAGGGGAACGAGCATGAGAGCATTAGAGAAGGTAACTTAAGGTTCTGACTTCTCTTCTAATCTATAGTTCTCAATTTTCATATTGATTTAGGCATAGAGCCAATTTCTTTTGTTTTGCAAAAGAAATAAGTTAGATATGTTCACCCATGTCCTCTCTTTATTGAATTACAAATTCATAATTGTCACATGGAGGTTAAACATTAGACATGTTTGCCCCTACAACAAAATCAATTTCTAATTTTTCTACAAGAGTGAAGAGTTTTAGATCGATCCATGCTATGGTGATCAGAATAATAAACAAATTTAAAACTTAGCAATTGAAATACAGAGGGACAGGTTAAGATAGTTATTGTATTCTTAGCTAAACTTAATATTTTTATTTAAAAACTCTTTATTATACTCTTATTTTTATGTTTTTCATATATGTATTTTATTATTATTATTGTCATTTAATTCTAAAACCCAAATAGTCATTTTCATTCACAAGACGCTTTTAAATTGATAAGACTAATGCTTTAACTATAGATATTATCTTGGACAATTACGAGAACGTGACTATCCAAAAACAAATAAAGAAAAAAGAAAGTCAATTTTAAGAAGAATATTCTTTATAAATATTAATTTGGATAATTCATAAAAAATTACCGTGTTAACTAATCAAAGTATTAATTTACCAATGTGGCATATAGGGATAAAACAACCATTTTAACCTCAATATCAAAATGACCAAACTACCCTTGGAAGAAATAACCTATGCATGATATGACATTGTATCTTATTAGGGGCAAGAAAAGTATAGCCTAATTTTCCACTACTCTTTCACAATAGATAATATGGAAAATTTTATAGCAAGCTTTGAAAGCAACCAACTTCTTTTCTGCATCATCAAACAAATATAAGCCAAGCCCATCCCTTAAGCAAGCACTTGTATTTGCTATAAAGAAAATAATGACAAATGCTGATGAAACTGGACTTAACAACAACACTTTCTACCATAAATTCTCTTTACCCTTCAGTGTTGGCCAACGACCTCTTGCTGCGAACAAAAGGCACAAGAACGGCAAGGGCGGGATGGGGACGGAAAGAAAGCCATCATCGTTGTTGCCTTAA

mRNA sequence

ATGGCTTTAAGAATCAACTGTTCATCTTCTTCAGTTTTTCTCCTTCCTCAAGCTCCCGATTCAAATTCCTTCGATTCTACAAAAACCGCTCAATTATCTGTGAAGGAAGATGAAGGATCATGGAGAAGCCGAAGCGTATGCGCTTTAGGTTTAGCGAGCTTGATTTTCGCAATCGAACTCGGCGATGTCTTCGTGGCTAGTGAATCTCTGGCTCTGGAATCGCCGCCGCAACTTGTGGATTATTCGAGGAGGCGTGTGAAGATCTCGAGATGGAGCGATACAAGAAAATGCGCTCCATGGCGAGCCAATTCATTCGAGATCATCGTACCTGAGAACCTTCCCAGGCCGTCGCATCGCCGGAATTGGGAGGCAGTTGCATTTACATTCATGGATGTGAAGAACGCTCCGGGAATTCAAGCAAAATTGAACAAAAGAAAAGATCTAGTTGAATTGAGATGTAATGCAGTAGTACAGATTGGCATTATTCAGCAAGCTTTGAAAGCAACCAACTTCTTTTCTGCATCATCAAACAAATATAAGCCAAGCCCATCCCTTAAGCAAGCACTTGTATTTGCTATAAAGAAAATAATGACAAATGCTGATGAAACTGGACTTAACAACAACACTTTCTACCATAAATTCTCTTTACCCTTCAGTGTTGGCCAACGACCTCTTGCTGCGAACAAAAGGCACAAGAACGGCAAGGGCGGGATGGGGACGGAAAGAAAGCCATCATCGTTGTTGCCTTAA

Coding sequence (CDS)

ATGGCTTTAAGAATCAACTGTTCATCTTCTTCAGTTTTTCTCCTTCCTCAAGCTCCCGATTCAAATTCCTTCGATTCTACAAAAACCGCTCAATTATCTGTGAAGGAAGATGAAGGATCATGGAGAAGCCGAAGCGTATGCGCTTTAGGTTTAGCGAGCTTGATTTTCGCAATCGAACTCGGCGATGTCTTCGTGGCTAGTGAATCTCTGGCTCTGGAATCGCCGCCGCAACTTGTGGATTATTCGAGGAGGCGTGTGAAGATCTCGAGATGGAGCGATACAAGAAAATGCGCTCCATGGCGAGCCAATTCATTCGAGATCATCGTACCTGAGAACCTTCCCAGGCCGTCGCATCGCCGGAATTGGGAGGCAGTTGCATTTACATTCATGGATGTGAAGAACGCTCCGGGAATTCAAGCAAAATTGAACAAAAGAAAAGATCTAGTTGAATTGAGATGTAATGCAGTAGTACAGATTGGCATTATTCAGCAAGCTTTGAAAGCAACCAACTTCTTTTCTGCATCATCAAACAAATATAAGCCAAGCCCATCCCTTAAGCAAGCACTTGTATTTGCTATAAAGAAAATAATGACAAATGCTGATGAAACTGGACTTAACAACAACACTTTCTACCATAAATTCTCTTTACCCTTCAGTGTTGGCCAACGACCTCTTGCTGCGAACAAAAGGCACAAGAACGGCAAGGGCGGGATGGGGACGGAAAGAAAGCCATCATCGTTGTTGCCTTAA

Protein sequence

MALRINCSSSSVFLLPQAPDSNSFDSTKTAQLSVKEDEGSWRSRSVCALGLASLIFAIELGDVFVASESLALESPPQLVDYSRRRVKISRWSDTRKCAPWRANSFEIIVPENLPRPSHRRNWEAVAFTFMDVKNAPGIQAKLNKRKDLVELRCNAVVQIGIIQQALKATNFFSASSNKYKPSPSLKQALVFAIKKIMTNADETGLNNNTFYHKFSLPFSVGQRPLAANKRHKNGKGGMGTERKPSSLLP
Homology
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BLAST of CaUC05G096540 vs. NCBI nr
Match: XP_038899075.1 (uncharacterized protein LOC120086473 [Benincasa hispida])

HSP 1 Score: 253.8 bits (647), Expect = 1.5e-63
Identity = 124/144 (86.11%), Postives = 133/144 (92.36%), Query Frame = 0 

Query: 1   MALRINCSSSSVFLLPQAPDSNSFDSTKTAQLSVKEDEGSWRSRSVCALGLASLIFAIEL 60
           MALRI+CSSSSVFLLPQAPDSNSFDSTKTA+LSVKEDEGSWRSRSVC LGLASLIFAIE+
Sbjct: 1   MALRISCSSSSVFLLPQAPDSNSFDSTKTARLSVKEDEGSWRSRSVCVLGLASLIFAIEV 60

Query: 61  GDVFVASESLALESPPQLVDYSRRRVKISRWSDTRKCAPWRANSFEIIVPENLPRPSHRR 120
            D+FVASESLALESPPQLVDYSR+RVKISRWSD RKCAPWRANS E IVPENLPRPSHRR
Sbjct: 61  SDIFVASESLALESPPQLVDYSRKRVKISRWSDKRKCAPWRANSLEFIVPENLPRPSHRR 120

Query: 121 NWEAVAFTFMDVKNAPGIQAKLNK 145
            WEA+A+  MDVKNAPGI+   +K
Sbjct: 121 KWEAIAYESMDVKNAPGIRVISSK 144

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BLAST of CaUC05G096540 vs. NCBI nr
Match: KAA0038795.1 (uncharacterized protein E6C27_scaffold92G003500 [Cucumis melo var. makuwa] >TYK31416.1 uncharacterized protein E5676_scaffold455G007250 [Cucumis melo var. makuwa])

HSP 1 Score: 213.8 bits (543), Expect = 1.7e-51
Identity = 114/143 (79.72%), Postives = 124/143 (86.71%), Query Frame = 0 

Query: 1   MALRINCSSSSVFLLPQAPDSNSFDSTKTAQLSVKEDEGSWRSRSVCALGLASLIFAIEL 60
           MAL INCSSSSVFLLPQ P  NSFDSTKTA+L +KED GSWRSRSVCALGLASLIFAIE+
Sbjct: 1   MALTINCSSSSVFLLPQPPHLNSFDSTKTAKLPLKEDGGSWRSRSVCALGLASLIFAIEI 60

Query: 61  GDVFVASESLALESPPQLVD-YSRRRV-KISRWSD-TRKCAPWRANSFEIIVPENLPRPS 120
           GDVF+ASESLALES PQLVD YSRRR+ KI RWSD  RKCAPWRA S EIIVPENLPRPS
Sbjct: 61  GDVFIASESLALESSPQLVDYYSRRRMKKIPRWSDEIRKCAPWRAKSLEIIVPENLPRPS 120

Query: 121 HRRNWEAVAFTFMDV-KNAPGIQ 140
            RR  EA+A+ F+D+ KNAPG+Q
Sbjct: 121 QRRKCEAIAYEFIDMKKNAPGVQ 143

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BLAST of CaUC05G096540 vs. NCBI nr
Match: XP_004136339.1 (uncharacterized protein LOC101204764 [Cucumis sativus] >KGN60120.1 hypothetical protein Csa_001027 [Cucumis sativus])

HSP 1 Score: 199.1 bits (505), Expect = 4.4e-47
Identity = 111/153 (72.55%), Postives = 124/153 (81.05%), Query Frame = 0 

Query: 1   MALRINCSSSSVFLLPQAPDSNSFDSTKTAQLSVKEDEGSWRS-RSVCALGLASLIFAIE 60
           MALRINCSSSS+ LLPQAP SNSF STK+++LS+KEDE SWRS RSVCALGLASLIFAIE
Sbjct: 1   MALRINCSSSSLLLLPQAPHSNSFHSTKSSKLSLKEDERSWRSRRSVCALGLASLIFAIE 60

Query: 61  LGDVFVASESLALESPPQ-LVDY---SRRRVKISRWSD-TRKCAPWRANSFEIIVPENLP 120
           + DVF+ASESLA+ESPPQ LVDY    RR  KISRWSD  RKCAPWRANS EIIVPENLP
Sbjct: 61  ISDVFIASESLAVESPPQVLVDYYSRIRRMKKISRWSDKIRKCAPWRANSLEIIVPENLP 120

Query: 121 RPSHRRNWEAVAFT-FMDVKN--APGIQAKLNK 145
           R S RR WE +A+  F+DVK    PGIQ   ++
Sbjct: 121 RASQRRKWEGIAYNEFIDVKKNAPPGIQVSASE 153

[Close]
BLAST of CaUC05G096540 vs. NCBI nr
Match: XP_023524416.1 (uncharacterized protein LOC111788320 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 198.4 bits (503), Expect = 7.5e-47
Identity = 105/144 (72.92%), Postives = 117/144 (81.25%), Query Frame = 0 

Query: 1   MALRINCSSSSVFLLPQAPDSNSFDSTKTAQLSVKEDEGSWRSRSVCALGLASLIFAIEL 60
           M L INC SSSV LLP+APDSNSFDS+K A+LS K+D+G+WR RS CALGLASLI AIE 
Sbjct: 1   MGLGINC-SSSVVLLPRAPDSNSFDSSKVARLSAKDDKGTWRIRSRCALGLASLILAIEF 60

Query: 61  GDVFVASESLALESPPQLVDYSRRRVKISRWSDTRKCAPWRANSFEIIVPENLPRPSHRR 120
           GDV VA E+ ALESPPQ+VD   RRVKISRWSD RKCA WRANS EIIVPENLPRPS RR
Sbjct: 61  GDVSVAVETQALESPPQVVD--SRRVKISRWSDKRKCAQWRANSLEIIVPENLPRPSQRR 120

Query: 121 NWEAVAFTFMDVKNAPGIQAKLNK 145
            WEA+AFT  DV+NAP +Q   +K
Sbjct: 121 KWEAIAFT--DVENAPAVQVISSK 139

[Close]
BLAST of CaUC05G096540 vs. NCBI nr
Match: XP_022981718.1 (uncharacterized protein LOC111480783 [Cucurbita maxima])

HSP 1 Score: 196.4 bits (498), Expect = 2.8e-46
Identity = 105/154 (68.18%), Postives = 121/154 (78.57%), Query Frame = 0 

Query: 1   MALRINCSSSSVFLLPQAPDSNSFDSTKTAQLSVKEDEGSWRSRSVCALGLASLIFAIEL 60
           M L INC SSSV LLP+APDSNSFDS+K A+LS K+D G+WR RS CALGLASLI AIE 
Sbjct: 1   MGLGINC-SSSVVLLPRAPDSNSFDSSKVARLSAKDDRGTWRIRSRCALGLASLILAIEF 60

Query: 61  GDVFVASESLALESPPQLVDYSRRRVKISRWSDTRKCAPWRANSFEIIVPENLPRPSHRR 120
           GD+ VA E+ ALESPPQ+VD   RRVKISRWSD RKCA WRANS EIIVPENLPRPS RR
Sbjct: 61  GDISVAVETQALESPPQVVD--SRRVKISRWSDKRKCAQWRANSLEIIVPENLPRPSQRR 120

Query: 121 NWEAVAFTFMDVKNAPGIQAKLNKRKDLVELRCN 155
            WE +AFT  DV+NAP +Q  L+   D++ + C+
Sbjct: 121 KWETIAFT--DVENAPAVQFWLH---DVMIITCS 146

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BLAST of CaUC05G096540 vs. ExPASy TrEMBL
Match: A0A5A7TBN7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007250 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 8.3e-52
Identity = 114/143 (79.72%), Postives = 124/143 (86.71%), Query Frame = 0 

Query: 1   MALRINCSSSSVFLLPQAPDSNSFDSTKTAQLSVKEDEGSWRSRSVCALGLASLIFAIEL 60
           MAL INCSSSSVFLLPQ P  NSFDSTKTA+L +KED GSWRSRSVCALGLASLIFAIE+
Sbjct: 1   MALTINCSSSSVFLLPQPPHLNSFDSTKTAKLPLKEDGGSWRSRSVCALGLASLIFAIEI 60

Query: 61  GDVFVASESLALESPPQLVD-YSRRRV-KISRWSD-TRKCAPWRANSFEIIVPENLPRPS 120
           GDVF+ASESLALES PQLVD YSRRR+ KI RWSD  RKCAPWRA S EIIVPENLPRPS
Sbjct: 61  GDVFIASESLALESSPQLVDYYSRRRMKKIPRWSDEIRKCAPWRAKSLEIIVPENLPRPS 120

Query: 121 HRRNWEAVAFTFMDV-KNAPGIQ 140
            RR  EA+A+ F+D+ KNAPG+Q
Sbjct: 121 QRRKCEAIAYEFIDMKKNAPGVQ 143

[Close]
BLAST of CaUC05G096540 vs. ExPASy TrEMBL
Match: A0A0A0LDQ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G878890 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 2.1e-47
Identity = 111/153 (72.55%), Postives = 124/153 (81.05%), Query Frame = 0 

Query: 1   MALRINCSSSSVFLLPQAPDSNSFDSTKTAQLSVKEDEGSWRS-RSVCALGLASLIFAIE 60
           MALRINCSSSS+ LLPQAP SNSF STK+++LS+KEDE SWRS RSVCALGLASLIFAIE
Sbjct: 1   MALRINCSSSSLLLLPQAPHSNSFHSTKSSKLSLKEDERSWRSRRSVCALGLASLIFAIE 60

Query: 61  LGDVFVASESLALESPPQ-LVDY---SRRRVKISRWSD-TRKCAPWRANSFEIIVPENLP 120
           + DVF+ASESLA+ESPPQ LVDY    RR  KISRWSD  RKCAPWRANS EIIVPENLP
Sbjct: 61  ISDVFIASESLAVESPPQVLVDYYSRIRRMKKISRWSDKIRKCAPWRANSLEIIVPENLP 120

Query: 121 RPSHRRNWEAVAFT-FMDVKN--APGIQAKLNK 145
           R S RR WE +A+  F+DVK    PGIQ   ++
Sbjct: 121 RASQRRKWEGIAYNEFIDVKKNAPPGIQVSASE 153

[Close]
BLAST of CaUC05G096540 vs. ExPASy TrEMBL
Match: A0A6J1J2V8 (uncharacterized protein LOC111480783 OS=Cucurbita maxima OX=3661 GN=LOC111480783 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 1.4e-46
Identity = 105/154 (68.18%), Postives = 121/154 (78.57%), Query Frame = 0 

Query: 1   MALRINCSSSSVFLLPQAPDSNSFDSTKTAQLSVKEDEGSWRSRSVCALGLASLIFAIEL 60
           M L INC SSSV LLP+APDSNSFDS+K A+LS K+D G+WR RS CALGLASLI AIE 
Sbjct: 1   MGLGINC-SSSVVLLPRAPDSNSFDSSKVARLSAKDDRGTWRIRSRCALGLASLILAIEF 60

Query: 61  GDVFVASESLALESPPQLVDYSRRRVKISRWSDTRKCAPWRANSFEIIVPENLPRPSHRR 120
           GD+ VA E+ ALESPPQ+VD   RRVKISRWSD RKCA WRANS EIIVPENLPRPS RR
Sbjct: 61  GDISVAVETQALESPPQVVD--SRRVKISRWSDKRKCAQWRANSLEIIVPENLPRPSQRR 120

Query: 121 NWEAVAFTFMDVKNAPGIQAKLNKRKDLVELRCN 155
            WE +AFT  DV+NAP +Q  L+   D++ + C+
Sbjct: 121 KWETIAFT--DVENAPAVQFWLH---DVMIITCS 146

[Close]
BLAST of CaUC05G096540 vs. ExPASy TrEMBL
Match: A0A6J1CAH3 (uncharacterized protein LOC111009442 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111009442 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 9.9e-45
Identity = 103/143 (72.03%), Postives = 113/143 (79.02%), Query Frame = 0 

Query: 1   MALRINCSSSSVFLLPQAPDSNSFDSTKTAQLSVKEDEGSWRSRSVCALGLASLIFAIEL 60
           MALR+NC S+SVFLLP+APDSNSFD++K A+LS+KE EGSWRSR  CALGLASLI AIE 
Sbjct: 1   MALRVNC-SASVFLLPRAPDSNSFDTSKAARLSLKEGEGSWRSR--CALGLASLILAIEF 60

Query: 61  GDVFVASESLALES--PPQLVDYSRRRVKISRWSDTRKCAPWRANSFEIIVPENLPRPSH 120
           G+ FVA E  ALES  PPQLVD   RR+KISRWSD RKCAPWRANS E IVPENLPRPS 
Sbjct: 61  GNAFVAGEIQALESPPPPQLVD--SRRMKISRWSDKRKCAPWRANSLENIVPENLPRPSQ 120

Query: 121 RRNWEAVAFTFMDVKNAPGIQAK 142
           RR WE V FT     NAP IQ +
Sbjct: 121 RRKWETVTFTVDVETNAPAIQGQ 138

[Close]
BLAST of CaUC05G096540 vs. ExPASy TrEMBL
Match: A0A6J1CAG3 (uncharacterized protein LOC111009442 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009442 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.3e-44
Identity = 103/141 (73.05%), Postives = 112/141 (79.43%), Query Frame = 0 

Query: 1   MALRINCSSSSVFLLPQAPDSNSFDSTKTAQLSVKEDEGSWRSRSVCALGLASLIFAIEL 60
           MALR+NC S+SVFLLP+APDSNSFD++K A+LS+KE EGSWRSR  CALGLASLI AIE 
Sbjct: 1   MALRVNC-SASVFLLPRAPDSNSFDTSKAARLSLKEGEGSWRSR--CALGLASLILAIEF 60

Query: 61  GDVFVASESLALES--PPQLVDYSRRRVKISRWSDTRKCAPWRANSFEIIVPENLPRPSH 120
           G+ FVA E  ALES  PPQLVD   RR+KISRWSD RKCAPWRANS E IVPENLPRPS 
Sbjct: 61  GNAFVAGEIQALESPPPPQLVD--SRRMKISRWSDKRKCAPWRANSLENIVPENLPRPSQ 120

Query: 121 RRNWEAVAFTFMDVKNAPGIQ 140
           RR WE V FT     NAP IQ
Sbjct: 121 RRKWETVTFTVDVETNAPAIQ 136

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BLAST of CaUC05G096540 vs. TAIR 10
Match: AT2G25625.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; Has 24 Blast hits to 24 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 63.2 bits (152), Expect = 3.5e-10
Identity = 51/153 (33.33%), Postives = 78/153 (50.98%), Query Frame = 0 

Query: 1   MALRINCSSSSVFLLPQAPDSNSFDS-----TKTAQLSVKEDEGSWRSRSVCA--LGLAS 60
           MA RI+C  +    LP   DSNS  S       T+++S + +  +   ++ C+  LG+A+
Sbjct: 1   MAGRISCCLN----LPPL-DSNSAQSLASLLKTTSKISWRTENETEPRKNKCSFVLGVAA 60

Query: 61  --LIFAIELGDVFVASESLALESPPQLVDYSRRRVKISRWSDTRKCAPWRANSFEIIVPE 120
             +I  I++ DV  + E+  ++SP +  + +   V   RWSD R C PW  NS E IVPE
Sbjct: 61  TVVIGGIQINDV-ASVEAAVVKSPVE--EMAAGVVPPRRWSDKRTCPPWLENSLETIVPE 120

Query: 121 NLPRPSHRRNWEAVAFTFMDVKNAPGIQAKLNK 145
           NLPRPS  R  E       D      +  ++N+
Sbjct: 121 NLPRPSAHRRLELAGLAKGDAPPVGVVMTRVNR 145

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BLAST of CaUC05G096540 vs. TAIR 10
Match: AT2G25625.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; Has 24 Blast hits to 24 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 63.2 bits (152), Expect = 3.5e-10
Identity = 53/154 (34.42%), Postives = 77/154 (50.00%), Query Frame = 0 

Query: 1   MALRINCSSSSVFLLPQAPDSNSFDS-----TKTAQLSVKEDEGSWRSR-SVCA--LGLA 60
           MA RI+C  +    LP   DSNS  S       T+++S +  E     R + C+  LG+A
Sbjct: 1   MAGRISCCLN----LPPL-DSNSAQSLASLLKTTSKISCRRTENETEPRKNKCSFVLGVA 60

Query: 61  S--LIFAIELGDVFVASESLALESPPQLVDYSRRRVKISRWSDTRKCAPWRANSFEIIVP 120
           +  +I  I++ DV  + E+  ++SP +  + +   V   RWSD R C PW  NS E IVP
Sbjct: 61  ATVVIGGIQINDV-ASVEAAVVKSPVE--EMAAGVVPPRRWSDKRTCPPWLENSLETIVP 120

Query: 121 ENLPRPSHRRNWEAVAFTFMDVKNAPGIQAKLNK 145
           ENLPRPS  R  E       D      +  ++N+
Sbjct: 121 ENLPRPSAHRRLELAGLAKGDAPPVGVVMTRVNR 146

The following BLAST results are available for this feature:
BLAST of CaUC05G096540 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038899075.11.5e-6386.11uncharacterized protein LOC120086473 [Benincasa hispida][more]
KAA0038795.11.7e-5179.72uncharacterized protein E6C27_scaffold92G003500 [Cucumis melo var. makuwa] >TYK3... [more]
XP_004136339.14.4e-4772.55uncharacterized protein LOC101204764 [Cucumis sativus] >KGN60120.1 hypothetical ... [more]
XP_023524416.17.5e-4772.92uncharacterized protein LOC111788320 [Cucurbita pepo subsp. pepo][more]
XP_022981718.12.8e-4668.18uncharacterized protein LOC111480783 [Cucurbita maxima][more]
BLAST of CaUC05G096540 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CaUC05G096540 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TBN78.3e-5279.72Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LDQ82.1e-4772.55Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G878890 PE=4 SV=1[more]
A0A6J1J2V81.4e-4668.18uncharacterized protein LOC111480783 OS=Cucurbita maxima OX=3661 GN=LOC111480783... [more]
A0A6J1CAH39.9e-4572.03uncharacterized protein LOC111009442 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A6J1CAG31.3e-4473.05uncharacterized protein LOC111009442 isoform X1 OS=Momordica charantia OX=3673 G... [more]
BLAST of CaUC05G096540 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G25625.23.5e-1033.33unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G25625.13.5e-1034.42unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 228..249
NoneNo IPR availablePANTHERPTHR37210:SF2EXPRESSED PROTEINcoord: 1..145
NoneNo IPR availablePANTHERPTHR37210EXPRESSED PROTEINcoord: 1..145

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC05G096540.1CaUC05G096540.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0050896 response to stimulus
cellular_component GO:0043231 intracellular membrane-bounded organelle