CaUC05G095850 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGACACATGTAAAGTGATGATTCGTTCAAACTAAGTATTCTTACGTGGCACCCAAACCACGCCGAAACCCCAAATTCACTTTAATTTCCGAGACTTCACAAAAAATAAAAAAGAGAAAAAAAAAAGGATTAATTATTTAAATCCCAATTCATTCTTAGTTTCACCGATCGTACCCAAAATCGGAATCGCATAATTCTTTCATTTTTCTTTTGGACGTCGTCGGTTTTGGCGAGATCTTCCGATCAACCGTGGCTTCTTCAGCGTCTTCAGGTCTGTCTCGGAGAAAACCTTCGGCTTCAGCTTCTCCTCCGCCGTCAGCGCCGACGAGGATCGTCTACAGGGAGAGAGTTCCGCCGTCGCATTCCGATTTGCCTTTCTGGCAGCGTAACTGGTTCATCGCCTTGCTTTTCGTTATGGCCATCGGTTTCTTCGCTCTTGCGCTCTTTCTCTTCCTCGGTCTCGATCTTGACCATGGCTCCCCGTCGTCTGCCTCTGCTGCGTCCTCCGAAGGCGTCGAGGTTTGAATCACTTAACCCTGTTTATGTGCTTTGTGTTCGCATTGATTCGTTCGCGCTGGATTCACTCTGATTAGAAATTCAGGTTATTATTTTACTATGTAGATGATTGGTGAAGAAACGATCAGATTCGAATGAATTAGGGAATGGTTGATTCGACAATGTTGATTCGATTTGAACTTAGGAGCATGGAAGTTTTAATAAACTCACTTACTTCATTGAAAATCAATCGAACCTTTAAACGTCGTTGTTTTCCCCCTAAAAAACGCACGTGAAGCCATCTCTTAAGAAAATTTGGGTTTTCTTTCTGGAGATTCCCTGCTTGGTTTAGAACTGATCAAATGAGGTGACTGAGGGAAGATATAATGATTAATGAGTGAGGAAAATGGCAATGTGGATTCGAATCGAACTTATAAGCATGAAGCTGAAGGAATCTGCTCAAACGCAGATAGACGATTCGTTGGAGATCGCATTATTGGTTTAACCTTGTATTTTATTTACTGAAAAATTGCACATGCATCCATCTCTTAAGCAGATTTTGTTTTGCTTTCCTGTAATTTCATAATCTTACAGCGATTAATAAACAGAGCTCAAATTAAGTAACTGAATCCTACAATTGGAGCCATTTTGTTGATTGGTATCCTTGTTGAACAGATTACTTATGGGACAGTTCTAAAGCTGATGCACGAGAAAACTAAATTCCGTTTGCATTCCCATGACGTGCCCTATGGTTCTGGCAGTGGGCAACAGTCGGTCACCGGATTTCCAAATGTTGATGATTCCAATAGCTACTGGGTAAATCTCTCCCCTTTTCCTCCTTATTCTTTCCAACAAAAAATTGTTATCTGATTCTCCCCAAGAATGTTGGTGTTGGTTTGCAATTGTAACGAGTTTCTCATTGGCAGATAGTAAGACCTCAGCCTGGGACATCTGCGAAACAGGGAGACACAATTAAAAGTGGGACAATTATCAGATTGCAACACATGAGGACAAGGAAATGGCTGCACAGCCACTTGCATGCGTCCCCAATATCGGGAAATCTAGAGGTTATTGAATTGTAACGTTCATGTTTAACAATTTTTTTGACTGGTTGATCTCTTTATAATATGTCCATACCTCTTTGTGTTATCTGCTTGCTGCTTTGATGTTCCTCTCGTATTGAATTTTGTTGGTTGCTTGTGTTGATTTCTTGATGACTGAATTCATAAAGAAAGCTCATCAGTGCCCTAATTTAAGGGCATTTATTGAACCCAATTTTGTTGTTTGTGTATAGTGGAGCAAGAAAGTTATTGATCTGTTTGCATACTTGTTGAACGTAGGATTATATTCCTGAGAATTCAGTTATTAGCGTTACCAAAGGAAACCATAGTGTTGGACCGTACGTGCTTGATATTGTAGAACTACTATGAGCTTCTCATTCATCTTTTACTTGCACGAACTTTTCTAGTATATGGATTTGCCTTCAGAATATTCCGTTGATTTAGATGTACGTGTACTAAATTTCTGGCATTTCACAAATTCCAAAGATTGTTTGTTGAGTATTTTATTCTGCTATTAAAAATGTTTGTCCTGCGACAGATTCTGTTGTTATTAAATTTACCGAAGAAACCAAGTTCAAGGTCGCCAAATATTTTAGACAACAATTGTAATTTATAGTATGACATTATTATCGTTGACATCCCTCTTCCTACGTTTTTATAACCATTTCCTTTCTTCTACTTACAAAACGTCCATTCATGCAGTGATTTTCCACTTATAATTACTACATCACCATTTCTGTTTTGATTGGTATCTAAGCTTTCCCTAGCCGTTGTGATTTGTGGTTTCACTGTTTGACTTGTTTTGGCAACTGGCTTTTTTGATATGCATACCTCACTGTATGAGAATTTTGGTTCCAAATTCTGTTCATGGTTTCCAACTTTCCATGCTGGCTAATGGATATACTTTAGAATATAGTTAAGCCTATAGGACGTGAGAATATTGATTTCAAAATCTAATTATGGTTCCTATGCTTGCTAATGGTTCTAGACTCCTTGGTGCAGGTTAGTTGCTTTGGTGGAGATTCTGACTCCGACACGGGTGATTACTGGAGGTGAGATAATTATTTTCTTTAAAAACATGTATAGTTACACATACGTGTTAGTGGTTCCTCACCTACAAAGTTGTACAGGCTTATGATCGAAGGGAGTGGAAAGACATGGAAGCAAGAACAGAGAGTTCGGCTTCAGCATATCGATACCGGTGGCTACTTACACAGTCATGACAAGAAATACAGCCGTATTGCCGGAGGGCAGCAGGAGGTGAGACCCTGAGATGAGAACAACAAAATATCATCTCAATAAATCAGTAAATGTAAACATGGTCTGCTAGTCATTTGGAAGTAACAATTGGTAACCATTTTGTTTGCCTTTCGCAGGTCTGTGGAGTCCGGGAGAAGCGAGCTGACAATGTATGGCTGGCCGCAGAAGGGGTTTATCTTCCAATTACGGAGACGAAGTAGAAACATTTTGGTGAGGTAACCATGTATTTAACTTTCAAAATTAGGTTACTAGGTTTTTGAAATATTGAGAGATTGTTACCTGCTTTACATGAAGTTGAGCTGATTACTTAAAATATCGGTGGATGAAGGCATGACATTACTTGGACAGGATCTATTGTGTAGGTTGTATAATTGTGTCTTTGAGTTCTAAAGGACGTGTTGATGAAGTCCGTAGAGATTGATGCTATTCATTGATAATATATTAGGAGTACTCGGGGATACTGAAAATTAATGAAAATGATGAGCTTCCATTTTCAAACGCCTTCTACTGCTGCTGGCTTGGATTTCTGTTTCAGCCTCAATGATAGATGGTCCCTTTTTTATGCA ATGACACATTTTCACCGATCGTACCCAAAATCGGAATCGCATAATTCTTTCATTTTTCTTTTGGACGTCGTCGGTTTTGGCGAGATCTTCCGATCAACCGTGGCTTCTTCAGCGTCTTCAGGTCTGTCTCGGAGAAAACCTTCGGCTTCAGCTTCTCCTCCGCCGTCAGCGCCGACGAGGATCGTCTACAGGGAGAGAGTTCCGCCGTCGCATTCCGATTTGCCTTTCTGGCAGCGTAACTGGTTCATCGCCTTGCTTTTCGTTATGGCCATCGGTTTCTTCGCTCTTGCGCTCTTTCTCTTCCTCGGTCTCGATCTTGACCATGGCTCCCCGTCGTCTGCCTCTGCTGCGTCCTCCGAAGGCGTCGAGATTACTTATGGGACAGTTCTAAAGCTGATGCACGAGAAAACTAAATTCCGTTTGCATTCCCATGACGTGCCCTATGGTTCTGGCAGTGGGCAACAGTCGGTCACCGGATTTCCAAATGTTGATGATTCCAATAGCTACTGGATAGTAAGACCTCAGCCTGGGACATCTGCGAAACAGGGAGACACAATTAAAAGTGGGACAATTATCAGATTGCAACACATGAGGACAAGGAAATGGCTGCACAGCCACTTGCATGCGTCCCCAATATCGGGAAATCTAGAGGTTAGTTGCTTTGGTGGAGATTCTGACTCCGACACGGGTGATTACTGGAGGCTTATGATCGAAGGGAGTGGAAAGACATGGAAGCAAGAACAGAGAGTTCGGCTTCAGCATATCGATACCGGTGGCTACTTACACAGTCATGACAAGAAATACAGCCGTATTGCCGGAGGGCAGCAGGAGGTCTGTGGAGTCCGGGAGAAGCGAGCTGACAATGTATGGCTGGCCGCAGAAGGGGTTTATCTTCCAATTACGGAGACGAAGTAGAAACATTTTGGTGAGGTAACCATGTATTTAACTTTCAAAATTAGGTTACTAGGTTTTTGAAATATTGAGAGATTGTTACCTGCTTTACATGAAGTTGAGCTGATTACTTAAAATATCGGTGGATGAAGGCATGACATTACTTGGACAGGATCTATTGTGTAGGTTGTATAATTGTGTCTTTGAGTTCTAAAGGACGTGTTGATGAAGTCCGTAGAGATTGATGCTATTCATTGATAATATATTAGGAGTACTCGGGGATACTGAAAATTAATGAAAATGATGAGCTTCCATTTTCAAACGCCTTCTACTGCTGCTGGCTTGGATTTCTGTTTCAGCCTCAATGATAGATGGTCCCTTTTTTATGCA ATGACACATTTTCACCGATCGTACCCAAAATCGGAATCGCATAATTCTTTCATTTTTCTTTTGGACGTCGTCGGTTTTGGCGAGATCTTCCGATCAACCGTGGCTTCTTCAGCGTCTTCAGGTCTGTCTCGGAGAAAACCTTCGGCTTCAGCTTCTCCTCCGCCGTCAGCGCCGACGAGGATCGTCTACAGGGAGAGAGTTCCGCCGTCGCATTCCGATTTGCCTTTCTGGCAGCGTAACTGGTTCATCGCCTTGCTTTTCGTTATGGCCATCGGTTTCTTCGCTCTTGCGCTCTTTCTCTTCCTCGGTCTCGATCTTGACCATGGCTCCCCGTCGTCTGCCTCTGCTGCGTCCTCCGAAGGCGTCGAGATTACTTATGGGACAGTTCTAAAGCTGATGCACGAGAAAACTAAATTCCGTTTGCATTCCCATGACGTGCCCTATGGTTCTGGCAGTGGGCAACAGTCGGTCACCGGATTTCCAAATGTTGATGATTCCAATAGCTACTGGATAGTAAGACCTCAGCCTGGGACATCTGCGAAACAGGGAGACACAATTAAAAGTGGGACAATTATCAGATTGCAACACATGAGGACAAGGAAATGGCTGCACAGCCACTTGCATGCGTCCCCAATATCGGGAAATCTAGAGGTTAGTTGCTTTGGTGGAGATTCTGACTCCGACACGGGTGATTACTGGAGGCTTATGATCGAAGGGAGTGGAAAGACATGGAAGCAAGAACAGAGAGTTCGGCTTCAGCATATCGATACCGGTGGCTACTTACACAGTCATGACAAGAAATACAGCCGTATTGCCGGAGGGCAGCAGGAGGTCTGTGGAGTCCGGGAGAAGCGAGCTGACAATGTATGGCTGGCCGCAGAAGGGGTTTATCTTCCAATTACGGAGACGAAGTAG MTHFHRSYPKSESHNSFIFLLDVVGFGEIFRSTVASSASSGLSRRKPSASASPPPSAPTRIVYRERVPPSHSDLPFWQRNWFIALLFVMAIGFFALALFLFLGLDLDHGSPSSASAASSEGVEITYGTVLKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCFGGDSDSDTGDYWRLMIEGSGKTWKQEQRVRLQHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLPITETK Homology
BLAST of CaUC05G095850 vs. NCBI nr
Match: KAG7037641.1 (Stromal cell-derived factor 2-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 572.4 bits (1474), Expect = 2.3e-159 Identity = 285/305 (93.44%), Postives = 290/305 (95.08%), Query Frame = 0
BLAST of CaUC05G095850 vs. NCBI nr
Match: KAG6608288.1 (Stromal cell-derived factor 2-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 526.9 bits (1356), Expect = 1.1e-145 Identity = 259/267 (97.00%), Postives = 262/267 (98.13%), Query Frame = 0
BLAST of CaUC05G095850 vs. NCBI nr
Match: KAG6591542.1 (Stromal cell-derived factor 2-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 516.2 bits (1328), Expect = 2.0e-142 Identity = 252/279 (90.32%), Postives = 263/279 (94.27%), Query Frame = 0
BLAST of CaUC05G095850 vs. NCBI nr
Match: KAA0064593.1 (stromal cell-derived factor 2-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 513.5 bits (1321), Expect = 1.3e-141 Identity = 255/270 (94.44%), Postives = 260/270 (96.30%), Query Frame = 0
BLAST of CaUC05G095850 vs. NCBI nr
Match: KAG7024427.1 (Stromal cell-derived factor 2-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 503.1 bits (1294), Expect = 1.7e-138 Identity = 253/307 (82.41%), Postives = 264/307 (85.99%), Query Frame = 0
BLAST of CaUC05G095850 vs. ExPASy Swiss-Prot
Match: Q93ZE8 (Stromal cell-derived factor 2-like protein OS=Arabidopsis thaliana OX=3702 GN=SDF2 PE=1 SV=1) HSP 1 Score: 372.1 bits (954), Expect = 6.1e-102 Identity = 173/216 (80.09%), Postives = 196/216 (90.74%), Query Frame = 0
BLAST of CaUC05G095850 vs. ExPASy Swiss-Prot
Match: Q54P23 (Stromal cell-derived factor 2-like protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0284847 PE=3 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 7.0e-42 Identity = 88/179 (49.16%), Postives = 111/179 (62.01%), Query Frame = 0
BLAST of CaUC05G095850 vs. ExPASy Swiss-Prot
Match: Q99470 (Stromal cell-derived factor 2 OS=Homo sapiens OX=9606 GN=SDF2 PE=1 SV=2) HSP 1 Score: 162.5 bits (410), Expect = 7.3e-39 Identity = 87/190 (45.79%), Postives = 119/190 (62.63%), Query Frame = 0
BLAST of CaUC05G095850 vs. ExPASy Swiss-Prot
Match: Q9DCT5 (Stromal cell-derived factor 2 OS=Mus musculus OX=10090 GN=Sdf2 PE=1 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 4.7e-38 Identity = 85/190 (44.74%), Postives = 118/190 (62.11%), Query Frame = 0
BLAST of CaUC05G095850 vs. ExPASy Swiss-Prot
Match: Q3SZ45 (Stromal cell-derived factor 2 OS=Bos taurus OX=9913 GN=SDF2 PE=2 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 1.4e-37 Identity = 81/189 (42.86%), Postives = 116/189 (61.38%), Query Frame = 0
BLAST of CaUC05G095850 vs. ExPASy TrEMBL
Match: A0A5A7V8Z2 (Stromal cell-derived factor 2-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G003150 PE=4 SV=1) HSP 1 Score: 513.5 bits (1321), Expect = 6.2e-142 Identity = 255/270 (94.44%), Postives = 260/270 (96.30%), Query Frame = 0
BLAST of CaUC05G095850 vs. ExPASy TrEMBL
Match: A0A5D3D8V4 (Stromal cell-derived factor 2-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G001120 PE=4 SV=1) HSP 1 Score: 473.4 bits (1217), Expect = 7.1e-130 Identity = 272/423 (64.30%), Postives = 280/423 (66.19%), Query Frame = 0
BLAST of CaUC05G095850 vs. ExPASy TrEMBL
Match: A0A445KWC9 (Stromal cell-derived factor 2-like protein OS=Glycine soja OX=3848 GN=D0Y65_008927 PE=4 SV=1) HSP 1 Score: 465.7 bits (1197), Expect = 1.5e-127 Identity = 235/281 (83.63%), Postives = 250/281 (88.97%), Query Frame = 0
BLAST of CaUC05G095850 vs. ExPASy TrEMBL
Match: A0A371FQ99 (Stromal cell-derived factor 2-like protein (Fragment) OS=Mucuna pruriens OX=157652 GN=SDF2 PE=4 SV=1) HSP 1 Score: 464.2 bits (1193), Expect = 4.3e-127 Identity = 233/283 (82.33%), Postives = 250/283 (88.34%), Query Frame = 0
BLAST of CaUC05G095850 vs. ExPASy TrEMBL
Match: A0A6A1UWA3 (Stromal cell-derived factor 2-like protein OS=Morella rubra OX=262757 GN=CJ030_MR8G012761 PE=4 SV=1) HSP 1 Score: 461.8 bits (1187), Expect = 2.1e-126 Identity = 224/267 (83.90%), Postives = 245/267 (91.76%), Query Frame = 0
BLAST of CaUC05G095850 vs. TAIR 10
Match: AT2G25110.1 (stromal cell-derived factor 2-like protein precursor ) HSP 1 Score: 372.1 bits (954), Expect = 4.3e-103 Identity = 173/216 (80.09%), Postives = 196/216 (90.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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