CaUC05G095540 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC05G095540
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	ER membrane protein complex subunit 4
Location	Ciama_Chr05: 26574202 .. 26578299 (+)
RNA-Seq Expression	CaUC05G095540
Synteny	CaUC05G095540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTATTTAGTAAAAAAGTCGAGGTTAATATTAAATGTGTAAATATTGAAACATAGGAATTAAATAAAATAAATTTTAAACTGGAACGGTAAAAATAAAAATAAACATAAATTAAAATCAAACCTAAAAAATTTTAGTTGCTAAAGGTGAAACATTTTGAAAATTAGGACTGAAAATGGAAATTACTAAGTTAGAAAATATTCCAAGCGGTTTGATTAGCATTTCCCTTTTATCATTGGTTTTGGAAAATTAGAAAGATATTAATCTGGTTGAAATCTCCGGACCGTAAGCCTTCAAAAGGATCTGAATCTTAAAAACCTTTAGCGACTAAGAGCGAATTAACTCCAACTCCACCGTCGGAGAATCAGAAACAGTATTCTGAATGGAAAAGGGTAAAGGTTTGATGGTGGACGGCCGGCGATGGGCCGTCGATTTCTCCGACAATTCTTCATCGAATTCGACTCGCGATATTACTGATCCGCCCGGTTTCACTCGTGCTTCTCAAGATCAAGACGATTCCACTCTCAGCCGCCAAAAGAAGGATGCCGAATCCAATTGGAAGGCACAGGTGTTACTCGAAATTCTATTATTTTGGTCGATTAGGGTTTTCTTTTCCCCTTCTACTTGGATGTTAATTTTGAGATTGTTGTCCTTAATTTCTCATGTATCTCGCTGGGTTGTAGTTCTTAGACTGAGTCCGGGAGTCTTATAGCTTAGAAATAATCGATTGTCTTTTTAGGGGAGGAGTGGATGAGATTGCTTAATGGTGGATGCTTTGCGCTTTTCATTTTGTGTTCCTGCTGGGCTTTTATTTATTTATTTATTTATTTGTTTTTACCACGGCGACAAGAATTTTATTGTCAATTGTTGTAAAATCTAACCTTACAATGTATGAGCAGAAAGCTTGGGAAGTGGCACAGGCGCCTTTGAAGAATTTGTTCATGATGGGCTTCATGATGTGGATGGCTGGAAGCACTGTTCATTTATTTAGCATTGGTATCACATTTTCAGCTCTTTGGCAACCCATAAGCGCACTGCAAGGCGTTGGAAAGGGTAGGATTAGTATCCATTCTCTTTGCTAACTTATTCTTCCTCTTCTTCTTTGTGTGTGTGTATAGTTTGTCTAGTCTTTATTATTCTCCCTATAAGCATACTTTACCTACAGTACACACCACGCATTCGATTGTTTTGTTCATCTTTATAATTGACTATTGTACTTCTTCTGCTCTGATTTGCTATTAAGCTGGCTTGTAATCTCTGAATGAGCCAGCTTCATCCTCCCCACTTGATACTATGCAAAGAGGCTCATTAGGAGCATAGTCATATTCCTTGATTTGTTTTTTGGTGGTCTCTTTAGTTGGGTTGGGCCTTTTTTTAAGCAATACTTTCATTCTTCTTTGGTGTGAATGATGTTATTTATTGGAAAAAAATAATAATAATAAAAAAGAAAAAAGAACTAGGGGTAACTGAAGGACACAAACATATCTTGTTCGAGTAAGGTCGTAACTAGGTAGTGTTCTTTTAATATCTTCCTTTTCTATGTAGAACTAAATTCTGATTGTTCTGTTTGTAGAATGGCTATATAAGATATGCATTTTTTTTTTTTTTGGGATAAGAATATAAGATATGCATTTTTGAAATATGTTAGGAAGAATTGTTGGATGTTTGTGATTTGATTTTAGTAGTTATATCATTTTGTTGTCTGTTGGCATTGATATTTCTGTTCCCTGCAGTCTTTGAGCCTTATAAGGACAGTAAAGTAGATCTTCTTGGACCTAAGTTGCTGTTTATTGCCCTTAATCTTGGAGGATTAGCATTAGGTGTTTGGAAGGTGAGTTTTTAAAAATTATTATTGCTATTAATTTTAATTTTAATCTCTTAATCCCTAACAAGTTTTGAGCATCTCTTTAGTATTTGCTGATCACTGCTTAATTTTCTTGCGATCCAAATGTGGTTCTTGCAGCTTAACACTTTGGGGCTTTTGCCAACTCATGTATCGGACTGGGTTTCGTCTCTACCACCTGCTCAGGTAAGAGTCTTACTCCTATGTTAACATGATTACATTTTTACTTAGGCATGTGCTGTCTTGTGCATGTCACCTGATTTCTTAAATGATATGTGGAATTTTTTTTCTTGTTGTCCAATGATTCAAATAGCTTAATACCATGGCAACTCATGGGCTCCATGTTTCAATAACTTTTTTTAGATAAATAAACATTTCATTGATAAATGAAATAAGGGGAAAACCCCAAATTACCTAAAGGTGATTACAAGAGAGATCGCCAATTGATAGCTAAAAAGGATAAGTTGTAACGTTTGAAGGGGTGGTTAGTTTTGTACCAAGAAAAAGTAGTATAAAGAACAAAATCTAAAAACCGATCAAAGGAGGAAAAAGAGTCACGAAAAAGGTGCCCTTTTCTTTTGCCCCATAGTAACCAAATTATGTGTTTAACCACTAGAAGCTAGTCATGGTACAAATATGGTGTTAGGGTGCAAGTTCCCAATGCTTTCATTTCTGTTATAGGATGCAAGTTCTATTGTTAATAATCAAGAAGAAATATTTTCTCTAATGGTTTGGTTGATAAGATTTCTCGGCCATCTATTTGGTATACTCTTTCAAGTAGAGTTGAATCATTTCTAGGCCATATATATGATTATTAATGATCGGCTGCGGAAAGGAAAGGTTAGTTGTAGTTAGCTAGATTACAGGCTATTATTTATGGCATGTTTGGGAGTGTTTCAAAAATGGTTAGAACCAAGGTTGGCAAAAAAACCCGCAGGGCAAGTCGGGGAATCCTCGGTTTGACCCCCCGGGCTCCCGTTCGGGGTCGAGGTAGGGATGGGGAGGGTATCTTCGCCCCGGCCTCAGCACCAACCCCGCCCTGATATATCCCCGACCGCCCCCATATATGTGTGTATATATATATATATATATCGCTCTGTCTCGCTCTCTCTTTGTCTCGCTCTACTTATTGGTAGTAATTTGGTCCTGCATTTGAACTCGCAGTCTCGCTCTCTCTCACAGTCTCTCTCAATTTCGCTCTCTCTCAGTCTCGCTATCTCGTTCGCTATCACCGTCCCACTGTCTTGCTCTCGCTCTATCTCGGGGAACGGGGACCCGTTTCCCTGATGGGGAATCCCCGCCCTCGTCCCTACCTACAAATGGCGGGGATGGGGGTAAATTCCCCCCACGGGGGTGGGGACAGGGAACCCCCACCCACCCTCGTTGCCAACCCTAGTCAGAACCACGTTTTTGTTATTTTTAAAATCACTTTGAAAATGCTTTTAATCATTTTAATAGTATGAAAATTATGTTTAAAAGTGTAAAATTAAATATTGAGTTGATTTTGATTGATTAAAGGTGTGTTTTAGAGTGATTTTGAACATGACAAAATTAAATTAGTTAAGTTGGTGGGAACTAGGAATGGAGAAAATAGAAGGGGGAAGAATACGATATGAGTGAAGCAAATCACAACTGGTCAATGCATTATCACCCCAATTAAAAGGTCAAAGGTTCGAACCCTACCCCTTGTGAGGAAGAATTATACTTTTGTGTACCCTCTCTATCCTATGATTATGATAACTATAATCTTCAAATACGGATTTGAAGGCACCTAACACATTTTATAGGATCTAACAAATCAATCTCACAGGTTTAATTTTGTTTAAACATTGTTTCAATTGGATCAGAGATCTTCCCTGTTGTCACTTATAGTTATTCAGATTGTTTATCAAACTTTAACATGCAATAAATTGTAACTGAACGCATAAGCTGAAGAAACATGGACACAATTGAGATGTGTGCTAACAAAAGAATAGTAAATTGTAATGCCTTTTCTTTCATTGAACTCTTGGTTTGTGCCAGTACCTTGATCTTATTCTCTGTGATATTAGTCCTTCAATCCCCTGTACAATTGCTAAAGATTCGTCCGTCTTCTTTCTCAGGAGGTCGAATTTTCCGGTGGTGGGATTTCTCTTTGCTAGGATGCACAACACCACGTCGTCTGCTAATGACCGTGAAACCAACAGAGGAAATCATGGAGCTGGCTTGTTGATGATCAAATTTCACGGGTGGATTGCTCGTGTTGTGCATGAA

mRNA sequence

ATGAGTTTGATGGTGGACGGCCGGCGATGGGCCGTCGATTTCTCCGACAATTCTTCATCGAATTCGACTCGCGATATTACTGATCCGCCCGGTTTCACTCGTGCTTCTCAAGATCAAGACGATTCCACTCTCAGCCGCCAAAAGAAGGATGCCGAATCCAATTGGAAGGCACAGGTGTTACTCGAAATTCTATTATTTTGGTCGATTAGGGTTTTCTTTTCCCCTTCTACTTGGATGTTAATTTTGAGATTGTTGTCCTTAATTTCTCATGTATCTCGCTGGGTTGTAGTTCTTAGACTGAGTCCGGGAAAAGCTTGGGAAGTGGCACAGGCGCCTTTGAAGAATTTGTTCATGATGGGCTTCATGATGTGGATGGCTGGAAGCACTGTTCATTTATTTAGCATTGGTATCACATTTTCAGCTCTTTGGCAACCCATAAGCGCACTGCAAGGCGTTGGAAAGGTCTTTGAGCCTTATAAGGACAGTAAAGTAGATCTTCTTGGACCTAAGTTGCTGTTTATTGCCCTTAATCTTGGAGGATTAGCATTAGGTGTTTGGAAGCTTAACACTTTGGGGCTTTTGCCAACTCATGTATCGGACTGGGTTTCGTCTCTACCACCTGCTCAGTACCTTGATCTTATTCTCTGTGATATTAGTCCTTCAATCCCCTGTACAATTGCTAAAGATTCGTCCGTCTTCTTTCTCAGGAGGTCGAATTTTCCGGTGGTGGGATTTCTCTTTGCTAGGATGCACAACACCACGTCGTCTGCTAATGACCGTGAAACCAACAGAGGAAATCATGGAGCTGGCTTGTTGATGATCAAATTTCACGGGTGGATTGCTCGTGTTGTGCATGAA

Coding sequence (CDS)

ATGAGTTTGATGGTGGACGGCCGGCGATGGGCCGTCGATTTCTCCGACAATTCTTCATCGAATTCGACTCGCGATATTACTGATCCGCCCGGTTTCACTCGTGCTTCTCAAGATCAAGACGATTCCACTCTCAGCCGCCAAAAGAAGGATGCCGAATCCAATTGGAAGGCACAGGTGTTACTCGAAATTCTATTATTTTGGTCGATTAGGGTTTTCTTTTCCCCTTCTACTTGGATGTTAATTTTGAGATTGTTGTCCTTAATTTCTCATGTATCTCGCTGGGTTGTAGTTCTTAGACTGAGTCCGGGAAAAGCTTGGGAAGTGGCACAGGCGCCTTTGAAGAATTTGTTCATGATGGGCTTCATGATGTGGATGGCTGGAAGCACTGTTCATTTATTTAGCATTGGTATCACATTTTCAGCTCTTTGGCAACCCATAAGCGCACTGCAAGGCGTTGGAAAGGTCTTTGAGCCTTATAAGGACAGTAAAGTAGATCTTCTTGGACCTAAGTTGCTGTTTATTGCCCTTAATCTTGGAGGATTAGCATTAGGTGTTTGGAAGCTTAACACTTTGGGGCTTTTGCCAACTCATGTATCGGACTGGGTTTCGTCTCTACCACCTGCTCAGTACCTTGATCTTATTCTCTGTGATATTAGTCCTTCAATCCCCTGTACAATTGCTAAAGATTCGTCCGTCTTCTTTCTCAGGAGGTCGAATTTTCCGGTGGTGGGATTTCTCTTTGCTAGGATGCACAACACCACGTCGTCTGCTAATGACCGTGAAACCAACAGAGGAAATCATGGAGCTGGCTTGTTGATGATCAAATTTCACGGGTGGATTGCTCGTGTTGTGCATGAA

Protein sequence

MSLMVDGRRWAVDFSDNSSSNSTRDITDPPGFTRASQDQDDSTLSRQKKDAESNWKAQVLLEILLFWSIRVFFSPSTWMLILRLLSLISHVSRWVVVLRLSPGKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQYLDLILCDISPSIPCTIAKDSSVFFLRRSNFPVVGFLFARMHNTTSSANDRETNRGNHGAGLLMIKFHGWIARVVHE

Homology

[Close]

BLAST of CaUC05G095540 vs. NCBI nr
Match: XP_022935895.1 (ER membrane protein complex subunit 4-like [Cucurbita moschata] >XP_023535009.1 ER membrane protein complex subunit 4-like [Cucurbita pepo subsp. pepo] >KAG6591518.1 ER membrane protein complex subunit 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024405.1 ER membrane protein complex subunit 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 305.4 bits (781), Expect = 5.0e-79
Identity = 161/210 (76.67%), Postives = 163/210 (77.62%), Query Frame = 0


Query: 3   LMVDGRRWAVDFSDNSSSNSTRDITDPPGFTRASQDQDDSTLSRQKKDAESNWKAQVLLE 62
           LMVDGRRWAVDFSDNSSSNSTRDI DPPGFTRASQDQDDSTLSRQKKDAESNWKAQ    
Sbjct: 7   LMVDGRRWAVDFSDNSSSNSTRDIVDPPGFTRASQDQDDSTLSRQKKDAESNWKAQ---- 66

Query: 63  ILLFWSIRVFFSPSTWMLILRLLSLISHVSRWVVVLRLSPGKAWEVAQAPLKNLFMMGFM 122
                                                    KAWEVAQAPLKNLFMMGFM
Sbjct: 67  -----------------------------------------KAWEVAQAPLKNLFMMGFM 126

Query: 123 MWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLA 182
           MWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLA
Sbjct: 127 MWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLA 171

Query: 183 LGVWKLNTLGLLPTHVSDWVSSLPPAQYLD 213
           LGVWKLNTLGLLPTHVSDWVSSLPPAQ ++
Sbjct: 187 LGVWKLNTLGLLPTHVSDWVSSLPPAQEVE 171

[Close]

BLAST of CaUC05G095540 vs. NCBI nr
Match: XP_008452824.1 (PREDICTED: ER membrane protein complex subunit 4 [Cucumis melo])

HSP 1 Score: 305.1 bits (780), Expect = 6.5e-79
Identity = 161/210 (76.67%), Postives = 163/210 (77.62%), Query Frame = 0


Query: 3   LMVDGRRWAVDFSDNSSSNSTRDITDPPGFTRASQDQDDSTLSRQKKDAESNWKAQVLLE 62
           LMVDGRRWAVDFSDNSSSNSTRDI DPPGFTRASQDQDDSTLSRQKKDAESNWKAQ    
Sbjct: 7   LMVDGRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWKAQ---- 66

Query: 63  ILLFWSIRVFFSPSTWMLILRLLSLISHVSRWVVVLRLSPGKAWEVAQAPLKNLFMMGFM 122
                                                    KAWEVAQAPLKNLFMMGFM
Sbjct: 67  -----------------------------------------KAWEVAQAPLKNLFMMGFM 126

Query: 123 MWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLA 182
           MWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLA
Sbjct: 127 MWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLA 171

Query: 183 LGVWKLNTLGLLPTHVSDWVSSLPPAQYLD 213
           LGVWKLNTLGLLPTHVSDWVSSLPPAQ ++
Sbjct: 187 LGVWKLNTLGLLPTHVSDWVSSLPPAQEVE 171

[Close]

BLAST of CaUC05G095540 vs. NCBI nr
Match: TYK20021.1 (ER membrane protein complex subunit 4 [Cucumis melo var. makuwa])

HSP 1 Score: 304.7 bits (779), Expect = 8.5e-79
Identity = 161/207 (77.78%), Postives = 161/207 (77.78%), Query Frame = 0


Query: 3   LMVDGRRWAVDFSDNSSSNSTRDITDPPGFTRASQDQDDSTLSRQKKDAESNWKAQVLLE 62
           LMVDGRRWAVDFSDNSSSNSTRDI DPPGFTRASQDQDDSTLSRQKKDAESNWKAQ    
Sbjct: 7   LMVDGRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWKAQ---- 66

Query: 63  ILLFWSIRVFFSPSTWMLILRLLSLISHVSRWVVVLRLSPGKAWEVAQAPLKNLFMMGFM 122
                                                    KAWEVAQAPLKNLFMMGFM
Sbjct: 67  -----------------------------------------KAWEVAQAPLKNLFMMGFM 126

Query: 123 MWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLA 182
           MWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLA
Sbjct: 127 MWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLA 168

Query: 183 LGVWKLNTLGLLPTHVSDWVSSLPPAQ 210
           LGVWKLNTLGLLPTHVSDWVSSLPPAQ
Sbjct: 187 LGVWKLNTLGLLPTHVSDWVSSLPPAQ 168

[Close]

BLAST of CaUC05G095540 vs. NCBI nr
Match: KAA0064569.1 (ER membrane protein complex subunit 4 [Cucumis melo var. makuwa])

HSP 1 Score: 304.7 bits (779), Expect = 8.5e-79
Identity = 161/207 (77.78%), Postives = 161/207 (77.78%), Query Frame = 0


Query: 3   LMVDGRRWAVDFSDNSSSNSTRDITDPPGFTRASQDQDDSTLSRQKKDAESNWKAQVLLE 62
           LMVDGRRWAVDFSDNSSSNSTRDI DPPGFTRASQDQDDSTLSRQKKDAESNWKAQ    
Sbjct: 7   LMVDGRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWKAQ---- 66

Query: 63  ILLFWSIRVFFSPSTWMLILRLLSLISHVSRWVVVLRLSPGKAWEVAQAPLKNLFMMGFM 122
                                                    KAWEVAQAPLKNLFMMGFM
Sbjct: 67  ----------------------------------------QKAWEVAQAPLKNLFMMGFM 126

Query: 123 MWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLA 182
           MWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLA
Sbjct: 127 MWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLA 169

Query: 183 LGVWKLNTLGLLPTHVSDWVSSLPPAQ 210
           LGVWKLNTLGLLPTHVSDWVSSLPPAQ
Sbjct: 187 LGVWKLNTLGLLPTHVSDWVSSLPPAQ 169

[Close]

BLAST of CaUC05G095540 vs. NCBI nr
Match: KAG6608314.1 (ER membrane protein complex subunit 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 303.9 bits (777), Expect = 1.5e-78
Identity = 163/219 (74.43%), Postives = 166/219 (75.80%), Query Frame = 0


Query: 3   LMVDGRRWAVDFSDNSSSNSTRDITDPPGFTRASQDQDDSTLSRQKKDAESNWKAQVLLE 62
           LMVDGRRWAVDF+DNSSSNSTRDI DPPGF RASQDQDDSTLSRQKKDAESNWKAQ    
Sbjct: 7   LMVDGRRWAVDFTDNSSSNSTRDIPDPPGFNRASQDQDDSTLSRQKKDAESNWKAQ---- 66

Query: 63  ILLFWSIRVFFSPSTWMLILRLLSLISHVSRWVVVLRLSPGKAWEVAQAPLKNLFMMGFM 122
                                                    KAWEVAQAPLKNLFMMGFM
Sbjct: 67  -----------------------------------------KAWEVAQAPLKNLFMMGFM 126

Query: 123 MWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLA 182
           MWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLA
Sbjct: 127 MWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLA 180

Query: 183 LGVWKLNTLGLLPTHVSDWVSSLPPAQ---YLDLILCDI 219
           LGVWKLNTLGLLPTH+SDWVSSLPPAQ   +LD IL  I
Sbjct: 187 LGVWKLNTLGLLPTHISDWVSSLPPAQALAFLDQILAGI 180

[Close]

BLAST of CaUC05G095540 vs. ExPASy Swiss-Prot
Match: Q3T0K8 (ER membrane protein complex subunit 4 OS=Bos taurus OX=9913 GN=EMC4 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 4.0e-15
Identity = 40/109 (36.70%), Postives = 66/109 (60.55%), Query Frame = 0


Query: 104 KAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSK 163
           + W++A  PLK + M  F+M+MAG+T+ +F   +     W+PI AL  +   F+  + S 
Sbjct: 68  RCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKMLESSS 127

Query: 164 VDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQYLD 213
              L   L+++  NL GLAL V+K  ++GLLPTH SDW++ + P + ++
Sbjct: 128 QKFL-QGLVYLIGNLMGLALAVYKCQSMGLLPTHASDWLAFIEPPERME 175

[Close]

BLAST of CaUC05G095540 vs. ExPASy Swiss-Prot
Match: Q5J8M3 (ER membrane protein complex subunit 4 OS=Homo sapiens OX=9606 GN=EMC4 PE=1 SV=2)

HSP 1 Score: 83.6 bits (205), Expect = 4.0e-15
Identity = 40/109 (36.70%), Postives = 66/109 (60.55%), Query Frame = 0


Query: 104 KAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSK 163
           + W++A  PLK + M  F+M+MAG+T+ +F   +     W+PI AL  +   F+  + S 
Sbjct: 68  RCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKMLESSS 127

Query: 164 VDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQYLD 213
              L   L+++  NL GLAL V+K  ++GLLPTH SDW++ + P + ++
Sbjct: 128 QKFL-QGLVYLIGNLMGLALAVYKCQSMGLLPTHASDWLAFIEPPERME 175

[Close]

BLAST of CaUC05G095540 vs. ExPASy Swiss-Prot
Match: Q9CZX9 (ER membrane protein complex subunit 4 OS=Mus musculus OX=10090 GN=Emc4 PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 4.0e-15
Identity = 40/109 (36.70%), Postives = 66/109 (60.55%), Query Frame = 0


Query: 104 KAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSK 163
           + W++A  PLK + M  F+M+MAG+T+ +F   +     W+PI AL  +   F+  + S 
Sbjct: 68  RCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKMLESSS 127

Query: 164 VDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQYLD 213
              L   L+++  NL GLAL V+K  ++GLLPTH SDW++ + P + ++
Sbjct: 128 QKFL-QGLVYLIGNLMGLALAVYKCQSMGLLPTHASDWLAFIEPPERME 175

[Close]

BLAST of CaUC05G095540 vs. ExPASy Swiss-Prot
Match: Q5RC35 (ER membrane protein complex subunit 4 OS=Pongo abelii OX=9601 GN=EMC4 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 4.0e-15
Identity = 40/109 (36.70%), Postives = 66/109 (60.55%), Query Frame = 0


Query: 104 KAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSK 163
           + W++A  PLK + M  F+M+MAG+T+ +F   +     W+PI AL  +   F+  + S 
Sbjct: 68  RCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKMLESSS 127

Query: 164 VDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQYLD 213
              L   L+++  NL GLAL V+K  ++GLLPTH SDW++ + P + ++
Sbjct: 128 QKFL-QGLVYLIGNLMGLALAVYKCQSMGLLPTHASDWLAFIEPPERME 175

[Close]

BLAST of CaUC05G095540 vs. ExPASy Swiss-Prot
Match: Q6GR43 (ER membrane protein complex subunit 4 OS=Xenopus laevis OX=8355 GN=emc4 PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 5.3e-15
Identity = 42/109 (38.53%), Postives = 67/109 (61.47%), Query Frame = 0


Query: 104 KAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSK 163
           + W++A  PLK + M  F+M+MAG+T+ +F I +     W+PI AL      F+  + S 
Sbjct: 65  RCWDIALGPLKQIPMNLFIMYMAGNTISIFPIMMVCMMAWRPIQALLATPATFKLLESSG 124

Query: 164 VDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQYLD 213
              L   L+++  NL GLALGV+K  ++GLLPTH SDW++ + P + ++
Sbjct: 125 QRFL-QGLVYLIGNLLGLALGVYKCQSMGLLPTHASDWLAFIEPPERME 172

[Close]

BLAST of CaUC05G095540 vs. ExPASy TrEMBL
Match: A0A6J1FBZ1 (ER membrane protein complex subunit 4 OS=Cucurbita moschata OX=3662 GN=LOC111442661 PE=3 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 2.4e-79
Identity = 161/210 (76.67%), Postives = 163/210 (77.62%), Query Frame = 0


Query: 3   LMVDGRRWAVDFSDNSSSNSTRDITDPPGFTRASQDQDDSTLSRQKKDAESNWKAQVLLE 62
           LMVDGRRWAVDFSDNSSSNSTRDI DPPGFTRASQDQDDSTLSRQKKDAESNWKAQ    
Sbjct: 7   LMVDGRRWAVDFSDNSSSNSTRDIVDPPGFTRASQDQDDSTLSRQKKDAESNWKAQ---- 66

Query: 63  ILLFWSIRVFFSPSTWMLILRLLSLISHVSRWVVVLRLSPGKAWEVAQAPLKNLFMMGFM 122
                                                    KAWEVAQAPLKNLFMMGFM
Sbjct: 67  -----------------------------------------KAWEVAQAPLKNLFMMGFM 126

Query: 123 MWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLA 182
           MWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLA
Sbjct: 127 MWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLA 171

Query: 183 LGVWKLNTLGLLPTHVSDWVSSLPPAQYLD 213
           LGVWKLNTLGLLPTHVSDWVSSLPPAQ ++
Sbjct: 187 LGVWKLNTLGLLPTHVSDWVSSLPPAQEVE 171

[Close]

BLAST of CaUC05G095540 vs. ExPASy TrEMBL
Match: A0A1S3BUR2 (ER membrane protein complex subunit 4 OS=Cucumis melo OX=3656 GN=LOC103493734 PE=3 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 3.2e-79
Identity = 161/210 (76.67%), Postives = 163/210 (77.62%), Query Frame = 0


Query: 3   LMVDGRRWAVDFSDNSSSNSTRDITDPPGFTRASQDQDDSTLSRQKKDAESNWKAQVLLE 62
           LMVDGRRWAVDFSDNSSSNSTRDI DPPGFTRASQDQDDSTLSRQKKDAESNWKAQ    
Sbjct: 7   LMVDGRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWKAQ---- 66

Query: 63  ILLFWSIRVFFSPSTWMLILRLLSLISHVSRWVVVLRLSPGKAWEVAQAPLKNLFMMGFM 122
                                                    KAWEVAQAPLKNLFMMGFM
Sbjct: 67  -----------------------------------------KAWEVAQAPLKNLFMMGFM 126

Query: 123 MWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLA 182
           MWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLA
Sbjct: 127 MWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLA 171

Query: 183 LGVWKLNTLGLLPTHVSDWVSSLPPAQYLD 213
           LGVWKLNTLGLLPTHVSDWVSSLPPAQ ++
Sbjct: 187 LGVWKLNTLGLLPTHVSDWVSSLPPAQEVE 171

[Close]

BLAST of CaUC05G095540 vs. ExPASy TrEMBL
Match: A0A5D3D8X6 (ER membrane protein complex subunit 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G001390 PE=3 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 4.1e-79
Identity = 161/207 (77.78%), Postives = 161/207 (77.78%), Query Frame = 0


Query: 3   LMVDGRRWAVDFSDNSSSNSTRDITDPPGFTRASQDQDDSTLSRQKKDAESNWKAQVLLE 62
           LMVDGRRWAVDFSDNSSSNSTRDI DPPGFTRASQDQDDSTLSRQKKDAESNWKAQ    
Sbjct: 7   LMVDGRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWKAQ---- 66

Query: 63  ILLFWSIRVFFSPSTWMLILRLLSLISHVSRWVVVLRLSPGKAWEVAQAPLKNLFMMGFM 122
                                                    KAWEVAQAPLKNLFMMGFM
Sbjct: 67  -----------------------------------------KAWEVAQAPLKNLFMMGFM 126

Query: 123 MWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLA 182
           MWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLA
Sbjct: 127 MWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLA 168

Query: 183 LGVWKLNTLGLLPTHVSDWVSSLPPAQ 210
           LGVWKLNTLGLLPTHVSDWVSSLPPAQ
Sbjct: 187 LGVWKLNTLGLLPTHVSDWVSSLPPAQ 168

[Close]

BLAST of CaUC05G095540 vs. ExPASy TrEMBL
Match: A0A5A7VGD1 (ER membrane protein complex subunit 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G002900 PE=3 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 4.1e-79
Identity = 161/207 (77.78%), Postives = 161/207 (77.78%), Query Frame = 0


Query: 3   LMVDGRRWAVDFSDNSSSNSTRDITDPPGFTRASQDQDDSTLSRQKKDAESNWKAQVLLE 62
           LMVDGRRWAVDFSDNSSSNSTRDI DPPGFTRASQDQDDSTLSRQKKDAESNWKAQ    
Sbjct: 7   LMVDGRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWKAQ---- 66

Query: 63  ILLFWSIRVFFSPSTWMLILRLLSLISHVSRWVVVLRLSPGKAWEVAQAPLKNLFMMGFM 122
                                                    KAWEVAQAPLKNLFMMGFM
Sbjct: 67  ----------------------------------------QKAWEVAQAPLKNLFMMGFM 126

Query: 123 MWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLA 182
           MWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLA
Sbjct: 127 MWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLA 169

Query: 183 LGVWKLNTLGLLPTHVSDWVSSLPPAQ 210
           LGVWKLNTLGLLPTHVSDWVSSLPPAQ
Sbjct: 187 LGVWKLNTLGLLPTHVSDWVSSLPPAQ 169

[Close]

BLAST of CaUC05G095540 vs. ExPASy TrEMBL
Match: A0A6J1IP31 (ER membrane protein complex subunit 4 OS=Cucurbita maxima OX=3661 GN=LOC111477281 PE=3 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 1.2e-78
Identity = 160/207 (77.29%), Postives = 160/207 (77.29%), Query Frame = 0


Query: 3   LMVDGRRWAVDFSDNSSSNSTRDITDPPGFTRASQDQDDSTLSRQKKDAESNWKAQVLLE 62
           LMVDGRRWAVDFSDNSSSNSTRDI DPPGFTRASQDQDDSTLSRQKKDAESNWKAQ    
Sbjct: 7   LMVDGRRWAVDFSDNSSSNSTRDIVDPPGFTRASQDQDDSTLSRQKKDAESNWKAQ---- 66

Query: 63  ILLFWSIRVFFSPSTWMLILRLLSLISHVSRWVVVLRLSPGKAWEVAQAPLKNLFMMGFM 122
                                                    KAWEVAQAPLKNLFMMGFM
Sbjct: 67  -----------------------------------------KAWEVAQAPLKNLFMMGFM 126

Query: 123 MWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLA 182
           MWMAG TVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLA
Sbjct: 127 MWMAGRTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLA 168

Query: 183 LGVWKLNTLGLLPTHVSDWVSSLPPAQ 210
           LGVWKLNTLGLLPTHVSDWVSSLPPAQ
Sbjct: 187 LGVWKLNTLGLLPTHVSDWVSSLPPAQ 168

[Close]

BLAST of CaUC05G095540 vs. TAIR 10
Match: AT5G10780.1 (CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP017207, transmembrane protein 85 (InterPro:IPR016687), Protein of unknown function DUF1077 (InterPro:IPR009445); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 251.9 bits (642), Expect = 6.1e-67
Identity = 131/211 (62.09%), Postives = 149/211 (70.62%), Query Frame = 0


Query: 2   SLMVDGRRWAVDFSDNSSSNSTRDITDPPGFTRASQDQDDSTLSRQKKDAESNWKAQVLL 61
           ++M  GRRWAV+FSD S+  S+RDI DPPGF+RASQ+QDDS  SRQKKDAE+ WK Q   
Sbjct: 6   AVMGTGRRWAVEFSDQSTVPSSRDILDPPGFSRASQEQDDSANSRQKKDAEATWKLQ--- 65

Query: 62  EILLFWSIRVFFSPSTWMLILRLLSLISHVSRWVVVLRLSPGKAWEVAQAPLKNLFMMGF 121
                                                     KAWEVAQ+P KNL MMGF
Sbjct: 66  ------------------------------------------KAWEVAQSPFKNLMMMGF 125

Query: 122 MMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGL 181
           MMWMAG+TVHLFSIGITFSALWQPISALQ VGK+FEP+KD+KV+LL PKL+F+ALNLGGL
Sbjct: 126 MMWMAGNTVHLFSIGITFSALWQPISALQSVGKIFEPFKDNKVELLMPKLVFLALNLGGL 171

Query: 182 ALGVWKLNTLGLLPTHVSDWVSSLPPAQYLD 213
           ALGVWKLNTLGLLPTH SDWVSSLPP Q ++
Sbjct: 186 ALGVWKLNTLGLLPTHASDWVSSLPPPQEVE 171

[Close]

BLAST of CaUC05G095540 vs. TAIR 10
Match: AT5G10780.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP017207, transmembrane protein 85 (InterPro:IPR016687), Protein of unknown function DUF1077 (InterPro:IPR009445); Has 395 Blast hits to 395 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 122; Plants - 51; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). )

HSP 1 Score: 251.1 bits (640), Expect = 1.0e-66
Identity = 131/208 (62.98%), Postives = 147/208 (70.67%), Query Frame = 0


Query: 2   SLMVDGRRWAVDFSDNSSSNSTRDITDPPGFTRASQDQDDSTLSRQKKDAESNWKAQVLL 61
           ++M  GRRWAV+FSD S+  S+RDI DPPGF+RASQ+QDDS  SRQKKDAE+ WK Q   
Sbjct: 6   AVMGTGRRWAVEFSDQSTVPSSRDILDPPGFSRASQEQDDSANSRQKKDAEATWKLQ--- 65

Query: 62  EILLFWSIRVFFSPSTWMLILRLLSLISHVSRWVVVLRLSPGKAWEVAQAPLKNLFMMGF 121
                                                     KAWEVAQ+P KNL MMGF
Sbjct: 66  ------------------------------------------KAWEVAQSPFKNLMMMGF 125

Query: 122 MMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGL 181
           MMWMAG+TVHLFSIGITFSALWQPISALQ VGK+FEP+KD+KV+LL PKL+F+ALNLGGL
Sbjct: 126 MMWMAGNTVHLFSIGITFSALWQPISALQSVGKIFEPFKDNKVELLMPKLVFLALNLGGL 168

Query: 182 ALGVWKLNTLGLLPTHVSDWVSSLPPAQ 210
           ALGVWKLNTLGLLPTH SDWVSSLPP Q
Sbjct: 186 ALGVWKLNTLGLLPTHASDWVSSLPPPQ 168

The following BLAST results are available for this feature:

BLAST of CaUC05G095540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022935895.1	5.0e-79	76.67	ER membrane protein complex subunit 4-like [Cucurbita moschata] >XP_023535009.1 ...	[more]
XP_008452824.1	6.5e-79	76.67	PREDICTED: ER membrane protein complex subunit 4 [Cucumis melo]	[more]
TYK20021.1	8.5e-79	77.78	ER membrane protein complex subunit 4 [Cucumis melo var. makuwa]	[more]
KAA0064569.1	8.5e-79	77.78	ER membrane protein complex subunit 4 [Cucumis melo var. makuwa]	[more]
KAG6608314.1	1.5e-78	74.43	ER membrane protein complex subunit 4, partial [Cucurbita argyrosperma subsp. so...	[more]

BLAST of CaUC05G095540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3T0K8	4.0e-15	36.70	ER membrane protein complex subunit 4 OS=Bos taurus OX=9913 GN=EMC4 PE=2 SV=1	[more]
Q5J8M3	4.0e-15	36.70	ER membrane protein complex subunit 4 OS=Homo sapiens OX=9606 GN=EMC4 PE=1 SV=2	[more]
Q9CZX9	4.0e-15	36.70	ER membrane protein complex subunit 4 OS=Mus musculus OX=10090 GN=Emc4 PE=1 SV=1	[more]
Q5RC35	4.0e-15	36.70	ER membrane protein complex subunit 4 OS=Pongo abelii OX=9601 GN=EMC4 PE=2 SV=1	[more]
Q6GR43	5.3e-15	38.53	ER membrane protein complex subunit 4 OS=Xenopus laevis OX=8355 GN=emc4 PE=2 SV=...	[more]

BLAST of CaUC05G095540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FBZ1	2.4e-79	76.67	ER membrane protein complex subunit 4 OS=Cucurbita moschata OX=3662 GN=LOC111442...	[more]
A0A1S3BUR2	3.2e-79	76.67	ER membrane protein complex subunit 4 OS=Cucumis melo OX=3656 GN=LOC103493734 PE...	[more]
A0A5D3D8X6	4.1e-79	77.78	ER membrane protein complex subunit 4 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5A7VGD1	4.1e-79	77.78	ER membrane protein complex subunit 4 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A6J1IP31	1.2e-78	77.29	ER membrane protein complex subunit 4 OS=Cucurbita maxima OX=3661 GN=LOC11147728...	[more]

BLAST of CaUC05G095540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10780.1	6.1e-67	62.09	CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP017207, transme...	[more]
AT5G10780.2	1.0e-66	62.98	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009445	TMEM85/ER membrane protein complex subunit 4	PFAM	PF06417	DUF1077	coord: 103..205 e-value: 1.3E-35 score: 122.0
IPR009445	TMEM85/ER membrane protein complex subunit 4	PANTHER	PTHR19315	ER MEMBRANE PROTEIN COMPLEX SUBUNIT 4	coord: 4..63 coord: 104..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..49

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC05G095540.1	CaUC05G095540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0072546	EMC complex