CaUC05G093160 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTTGATTCTTAACGACCTCTTCGATCCGTTTCTTTCTATGATCAACCAATGTCCTGTTTTGAATACTCCCATTGACTGGAAAGAGACTCCGGCCGCTCACGTCTTCATTGCCGATCTGCCCGGGTTGAAGAAGGAGCAGGTAAGACGATATAGGCAACTCACACCATCAGCACCTCAAATTATACCAAATATCTCTAAATTTTAATCTTTTGAGTAGGTTTAAACTTTTAACGTTATGGTATTCATGTTTATGTTTTAAGTTGAAAATTTTAAAAATTTAGATCTATTTAGTAACTAATTCCTTTCCTGTTTTTGAGTTTTTGAGAATTATGTTTATAATTTTTTTAGAACAATTTGCATATTTATTAAATAAAATAGTTTAATTTTTAGTCAAATTCTAAAAATAGAAATAAGTTTCTAAAAATTAGTTTTTTTTTTTAGTTTCCAAAAGTTGGCTCGCTTTTAGACTTGAAAAGTAAAAATTTAAAATAAAAAAAATATATATATATATATATATATACATGAAATTGGAGGGAAAATGGGTGTTTGTAGGGTTACATTTTCAAAAACTAAAAACCAAATGGTTACGAATTAAACTTTTGTTTAATGTTTTGGAAAATTAAGCCCATAAACACATTTCTACCTCTATATTTACTGTTTTGTTATCTACCTTTTATCAATGTTTTATAAAAATTAAATCTAAGTTTTGAAAATAAAAAAGTAGGTTTTTAAAAAATTAAGAATATGGCTAAGAAGTCAACTCTTTTACTTAAAAAATGCAAACAATTGAAAGAAATTGATAGAAAACATACTTGATTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAAAAAAAAAAAAAAAAAAAAAAAAGAAACTATATAATTACCAAATAAGGTTATAGTTTTCAAATTATGATTTTTTATAATTAAGTCTCTAAACTTTTAGAAATATAGCTATATTATCTATTTTAGTTTTCGAAATTTTAAATTTTTTAAAATCTGCAACAATTTTGATGCTTATTTTATTTTATGTTTTAAATAAATTAACGATGCAGCTCGAGTGTGTTAACATAGTGCTAATGGGCTTGTTTCAATCCTGCTCGAGTAGGTGAAGGTGGAGGTGATGGAGGACGGCGATGGACGACTGCTGCAGATAAGTGGAGACAGGGGAGACGCTACTACCGCCAACGACGAGAATGACGAGAGTAGCGGTCATAAATGGCGGCGCGTGGAGCGTTGTCGGGGGAAATTCTGCAGGAGGTTTCGGCTGCCGGAGAATGTGAAGGCGGGCGAGGTGAGGGCGGCGATGGAGAACGGAGTTCTGACAGTGACCGTGCCAAAAGAGGAAATGATGAAGCCAGGGAAGAAAGTGATTGAGATTGAAACAGTTTAG ATGTCTTTGATTCTTAACGACCTCTTCGATCCGTTTCTTTCTATGATCAACCAATGTCCTGTTTTGAATACTCCCATTGACTGGAAAGAGACTCCGGCCGCTCACGTCTTCATTGCCGATCTGCCCGGGTTGAAGAAGGAGCAGGTGAAGGTGGAGGTGATGGAGGACGGCGATGGACGACTGCTGCAGATAAGTGGAGACAGGGGAGACGCTACTACCGCCAACGACGAGAATGACGAGAGTAGCGGTCATAAATGGCGGCGCGTGGAGCGTTGTCGGGGGAAATTCTGCAGGAGGTTTCGGCTGCCGGAGAATGTGAAGGCGGGCGAGGTGAGGGCGGCGATGGAGAACGGAGTTCTGACAGTGACCGTGCCAAAAGAGGAAATGATGAAGCCAGGGAAGAAAGTGATTGAGATTGAAACAGTTTAG ATGTCTTTGATTCTTAACGACCTCTTCGATCCGTTTCTTTCTATGATCAACCAATGTCCTGTTTTGAATACTCCCATTGACTGGAAAGAGACTCCGGCCGCTCACGTCTTCATTGCCGATCTGCCCGGGTTGAAGAAGGAGCAGGTGAAGGTGGAGGTGATGGAGGACGGCGATGGACGACTGCTGCAGATAAGTGGAGACAGGGGAGACGCTACTACCGCCAACGACGAGAATGACGAGAGTAGCGGTCATAAATGGCGGCGCGTGGAGCGTTGTCGGGGGAAATTCTGCAGGAGGTTTCGGCTGCCGGAGAATGTGAAGGCGGGCGAGGTGAGGGCGGCGATGGAGAACGGAGTTCTGACAGTGACCGTGCCAAAAGAGGAAATGATGAAGCCAGGGAAGAAAGTGATTGAGATTGAAACAGTTTAG MSLILNDLFDPFLSMINQCPVLNTPIDWKETPAAHVFIADLPGLKKEQVKVEVMEDGDGRLLQISGDRGDATTANDENDESSGHKWRRVERCRGKFCRRFRLPENVKAGEVRAAMENGVLTVTVPKEEMMKPGKKVIEIETV Homology
BLAST of CaUC05G093160 vs. NCBI nr
Match: XP_038875560.1 (class I heat shock protein-like [Benincasa hispida]) HSP 1 Score: 260.0 bits (663), Expect = 1.2e-65 Identity = 130/142 (91.55%), Postives = 137/142 (96.48%), Query Frame = 0
BLAST of CaUC05G093160 vs. NCBI nr
Match: XP_008450042.1 (PREDICTED: class I heat shock protein-like [Cucumis melo]) HSP 1 Score: 252.7 bits (644), Expect = 1.9e-63 Identity = 127/141 (90.07%), Postives = 132/141 (93.62%), Query Frame = 0
BLAST of CaUC05G093160 vs. NCBI nr
Match: KAA0066962.1 (class I heat shock protein-like [Cucumis melo var. makuwa] >TYK30241.1 class I heat shock protein-like [Cucumis melo var. makuwa]) HSP 1 Score: 250.0 bits (637), Expect = 1.2e-62 Identity = 126/141 (89.36%), Postives = 131/141 (92.91%), Query Frame = 0
BLAST of CaUC05G093160 vs. NCBI nr
Match: XP_004145723.1 (class I heat shock protein [Cucumis sativus] >KGN58218.1 hypothetical protein Csa_017596 [Cucumis sativus]) HSP 1 Score: 248.4 bits (633), Expect = 3.6e-62 Identity = 126/144 (87.50%), Postives = 134/144 (93.06%), Query Frame = 0
BLAST of CaUC05G093160 vs. NCBI nr
Match: XP_022154167.1 (18.1 kDa class I heat shock protein-like [Momordica charantia]) HSP 1 Score: 187.2 bits (474), Expect = 9.8e-44 Identity = 100/156 (64.10%), Postives = 114/156 (73.08%), Query Frame = 0
BLAST of CaUC05G093160 vs. ExPASy Swiss-Prot
Match: O82011 (17.7 kDa class I heat shock protein OS=Solanum peruvianum OX=4082 PE=2 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 4.8e-33 Identity = 84/140 (60.00%), Postives = 94/140 (67.14%), Query Frame = 0
BLAST of CaUC05G093160 vs. ExPASy Swiss-Prot
Match: P30221 (17.8 kDa class I heat shock protein OS=Solanum lycopersicum OX=4081 PE=2 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 5.3e-32 Identity = 81/140 (57.86%), Postives = 92/140 (65.71%), Query Frame = 0
BLAST of CaUC05G093160 vs. ExPASy Swiss-Prot
Match: O82012 (17.6 kDa class I heat shock protein OS=Solanum peruvianum OX=4082 PE=2 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 5.3e-32 Identity = 82/140 (58.57%), Postives = 92/140 (65.71%), Query Frame = 0
BLAST of CaUC05G093160 vs. ExPASy Swiss-Prot
Match: P27879 (18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa OX=3879 GN=HSP18.1 PE=2 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 6.9e-32 Identity = 76/120 (63.33%), Postives = 89/120 (74.17%), Query Frame = 0
BLAST of CaUC05G093160 vs. ExPASy Swiss-Prot
Match: P04794 (17.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-E PE=3 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 1.2e-31 Identity = 77/141 (54.61%), Postives = 93/141 (65.96%), Query Frame = 0
BLAST of CaUC05G093160 vs. ExPASy TrEMBL
Match: A0A1S3BNE8 (class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103491749 PE=3 SV=1) HSP 1 Score: 252.7 bits (644), Expect = 9.2e-64 Identity = 127/141 (90.07%), Postives = 132/141 (93.62%), Query Frame = 0
BLAST of CaUC05G093160 vs. ExPASy TrEMBL
Match: A0A5A7VF09 (Class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold595G00670 PE=3 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 6.0e-63 Identity = 126/141 (89.36%), Postives = 131/141 (92.91%), Query Frame = 0
BLAST of CaUC05G093160 vs. ExPASy TrEMBL
Match: A0A0A0L8Q9 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G595190 PE=3 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 1.7e-62 Identity = 126/144 (87.50%), Postives = 134/144 (93.06%), Query Frame = 0
BLAST of CaUC05G093160 vs. ExPASy TrEMBL
Match: A0A6J1DKY6 (18.1 kDa class I heat shock protein-like OS=Momordica charantia OX=3673 GN=LOC111021482 PE=3 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 4.8e-44 Identity = 100/156 (64.10%), Postives = 114/156 (73.08%), Query Frame = 0
BLAST of CaUC05G093160 vs. ExPASy TrEMBL
Match: A0A2C9UG06 (SHSP domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_15G154400 PE=3 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 8.1e-44 Identity = 98/137 (71.53%), Postives = 111/137 (81.02%), Query Frame = 0
BLAST of CaUC05G093160 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 132.9 bits (333), Expect = 2.1e-31 Identity = 76/144 (52.78%), Postives = 94/144 (65.28%), Query Frame = 0
BLAST of CaUC05G093160 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 129.8 bits (325), Expect = 1.7e-30 Identity = 74/139 (53.24%), Postives = 92/139 (66.19%), Query Frame = 0
BLAST of CaUC05G093160 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 ) HSP 1 Score: 128.3 bits (321), Expect = 5.1e-30 Identity = 74/143 (51.75%), Postives = 92/143 (64.34%), Query Frame = 0
BLAST of CaUC05G093160 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 ) HSP 1 Score: 127.5 bits (319), Expect = 8.6e-30 Identity = 78/146 (53.42%), Postives = 88/146 (60.27%), Query Frame = 0
BLAST of CaUC05G093160 vs. TAIR 10
Match: AT1G59860.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 116.3 bits (290), Expect = 2.0e-26 Identity = 67/138 (48.55%), Postives = 86/138 (62.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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