CaUC05G092040 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC05G092040
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Unknown protein
Location	Ciama_Chr05: 14453299 .. 14453658 (-)
RNA-Seq Expression	CaUC05G092040
Synteny	CaUC05G092040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCACTGGCCACACCATCAGTGGCAACCATCATTCTTCTTCTCCTCCTCCTCATTCCTACCGGCTCCACCGTCAACAACACCGCTGCCTCCGCCTCCTGCAACGGCAGCCACACGGAGAAATGCCACCTCATCGGAGAAGAGATCGCCAATTCCGAATTCTTGATGGAATCGGAGATCGGACGGATGCTGTTGAACTTCAATAAATTCAAAGGTCCCCAAACCCAAACCCCCAACAAACAGGCGGTGGCGTCCTGTGGCCGACCACCGCGGTACGACAGTTGTCTGGGCCAGAAGAGGCAAACGCCGCCACAGGAAAAATGCAACATCTACAAACGAGTGCCTTGTGGACAATGA

mRNA sequence

ATGGCAGCACTGGCCACACCATCAGTGGCAACCATCATTCTTCTTCTCCTCCTCCTCATTCCTACCGGCTCCACCGTCAACAACACCGCTGCCTCCGCCTCCTGCAACGGCAGCCACACGGAGAAATGCCACCTCATCGGAGAAGAGATCGCCAATTCCGAATTCTTGATGGAATCGGAGATCGGACGGATGCTGTTGAACTTCAATAAATTCAAAGGTCCCCAAACCCAAACCCCCAACAAACAGGCGGTGGCGTCCTGTGGCCGACCACCGCGGTACGACAGTTGTCTGGGCCAGAAGAGGCAAACGCCGCCACAGGAAAAATGCAACATCTACAAACGAGTGCCTTGTGGACAATGA

Coding sequence (CDS)

ATGGCAGCACTGGCCACACCATCAGTGGCAACCATCATTCTTCTTCTCCTCCTCCTCATTCCTACCGGCTCCACCGTCAACAACACCGCTGCCTCCGCCTCCTGCAACGGCAGCCACACGGAGAAATGCCACCTCATCGGAGAAGAGATCGCCAATTCCGAATTCTTGATGGAATCGGAGATCGGACGGATGCTGTTGAACTTCAATAAATTCAAAGGTCCCCAAACCCAAACCCCCAACAAACAGGCGGTGGCGTCCTGTGGCCGACCACCGCGGTACGACAGTTGTCTGGGCCAGAAGAGGCAAACGCCGCCACAGGAAAAATGCAACATCTACAAACGAGTGCCTTGTGGACAATGA

Protein sequence

MAALATPSVATIILLLLLLIPTGSTVNNTAASASCNGSHTEKCHLIGEEIANSEFLMESEIGRMLLNFNKFKGPQTQTPNKQAVASCGRPPRYDSCLGQKRQTPPQEKCNIYKRVPCGQ

Homology

[Close]

BLAST of CaUC05G092040 vs. NCBI nr
Match: KAA0032826.1 (hypothetical protein E6C27_scaffold708G00860 [Cucumis melo var. makuwa] >TYK30382.1 hypothetical protein E5676_scaffold575G00600 [Cucumis melo var. makuwa])

HSP 1 Score: 160.6 bits (405), Expect = 8.3e-36
Identity = 80/120 (66.67%), Postives = 100/120 (83.33%), Query Frame = 0


Query: 1   MAALATPSVATIIL-LLLLLIPTGSTVNNTAASASCNGSHTEKCHLIGEEIANSE-FLME 60
           MAAL+TPS+ TIIL LLL+LI +G TVN+T ASASCN SH++KCHL+ +++A+ +  +ME
Sbjct: 1   MAALSTPSIGTIILFLLLILIRSGFTVNDTTASASCNNSHSKKCHLVRDDVADYKLIMME 60

Query: 61  SEIGRMLLNFNKFKGPQTQTPNKQAVASCGRPPRYDSCLGQKRQTPPQEKCNIYKRVPCG 119
            E+GRMLL+FNK+  PQT T NK +  SCGRPPRYDSCLG+KR TPPQEKC +YKRVPCG
Sbjct: 61  LEMGRMLLDFNKYTTPQTGTANKNSGGSCGRPPRYDSCLGEKRDTPPQEKCYVYKRVPCG 120

[Close]

BLAST of CaUC05G092040 vs. NCBI nr
Match: KGN57776.1 (hypothetical protein Csa_010194 [Cucumis sativus])

HSP 1 Score: 142.1 bits (357), Expect = 3.0e-30
Identity = 74/116 (63.79%), Postives = 95/116 (81.90%), Query Frame = 0


Query: 1   MAALATPSVATIILLLLLLIPTGSTVNNTAASASCNGSHTEKCHLIGEEIANSEFLMESE 60
           MAAL+TPS+ TII LLLLLIP+G TVN+TAASASCN SH++KCHL+ +++ + EF+MESE
Sbjct: 1   MAALSTPSIGTII-LLLLLIPSGFTVNDTAASASCNSSHSKKCHLVRDDVGDYEFMMESE 60

Query: 61  IGRML-LNFNKFKGPQTQTPNKQAVA-SCGRPPRYDSCLGQKRQTPPQEKCNIYKR 115
           +G ML +N++K+K P T+  NKQ V   CGRPPRY+SCLG+KR T  QEKC +YKR
Sbjct: 61  MGWMLSINYDKYKSPPTRIANKQVVKDDCGRPPRYESCLGRKRDTLIQEKCAVYKR 115

[Close]

BLAST of CaUC05G092040 vs. NCBI nr
Match: KAG7011063.1 (hypothetical protein SDJN02_27861, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 99.8 bits (247), Expect = 1.7e-17
Identity = 61/119 (51.26%), Postives = 76/119 (63.87%), Query Frame = 0


Query: 2   AALATPSVATIILLLLLLIPTGS--TVNNTAASASCNGSHTEKCHLIGEEIANSEFLMES 61
           A L TPS+  + ++LLL  PT S   +N TAA   C+G   E C LIG+  ++SEFLME+
Sbjct: 10  ATLLTPSMTILFIILLLNPPTISHAAINKTAAE-WCDG-RLENC-LIGDLNSDSEFLMET 69

Query: 62  EIGRMLLNFNKFKGPQTQTPNKQAVASCGRPPRYDSCLGQKRQTPPQEKCNIYKRV-PC 118
           E  RMLL+FN F+ P T  P+KQ+   C RPPRYDSCLGQK   P  E C+   RV PC
Sbjct: 70  ETSRMLLDFNSFQTPNTNNPDKQSAPECNRPPRYDSCLGQKTSIPNPENCDTRNRVNPC 125

[Close]

BLAST of CaUC05G092040 vs. NCBI nr
Match: KAG6607065.1 (hypothetical protein SDJN03_00407, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 97.4 bits (241), Expect = 8.6e-17
Identity = 60/119 (50.42%), Postives = 75/119 (63.03%), Query Frame = 0


Query: 2   AALATPSVATIILLLLLLIPTGS--TVNNTAASASCNGSHTEKCHLIGEEIANSEFLMES 61
           A L TPS+  + ++LLL  PT S   +N TAA   C+G   E C LIG+  ++SEFLME+
Sbjct: 10  ATLLTPSMTILFIILLLNPPTISHAAINKTAAE-WCDG-RLENC-LIGDLNSDSEFLMET 69

Query: 62  EIGRMLLNFNKFKGPQTQTPNKQAVASCGRPPRYDSCLGQKRQTPPQEKCNIYKRV-PC 118
           E  RMLL+FN F+ P T  P+KQ+   C RPPRYD CLGQK   P  E C+   RV PC
Sbjct: 70  ETSRMLLDFNSFQTPNTNNPDKQSAPECNRPPRYDGCLGQKNIIPNPENCDTRNRVNPC 125

[Close]

BLAST of CaUC05G092040 vs. NCBI nr
Match: KAA0042447.1 (hypothetical protein E6C27_scaffold266G00270 [Cucumis melo var. makuwa] >TYK03509.1 hypothetical protein E5676_scaffold121G001310 [Cucumis melo var. makuwa])

HSP 1 Score: 96.7 bits (239), Expect = 1.5e-16
Identity = 57/113 (50.44%), Postives = 74/113 (65.49%), Query Frame = 0


Query: 7   PSVATIILLLLL-LIPTGSTVNNTAASASCNGSHTEKCHLIGEEIANSEFLMESEIGRML 66
           P++A IIL+LL   I   +TVN TA    C GS  E C LIG+E ++SEFLME++  RML
Sbjct: 8   PTMAIIILILLFNTIGCNTTVNETAPE-WCYGS--ENC-LIGDESSDSEFLMETDTSRML 67

Query: 67  LNFNKFKGPQTQTPNKQAVASCGRPPRYDSCLGQKRQTPPQEKCNIYKRV-PC 118
           L+F   + P T  PN+Q+V  CGRPPRYDSC+G+KR     E C++  R  PC
Sbjct: 68  LDFQNLQTPSTNNPNRQSVPECGRPPRYDSCIGEKRSISNPENCDVRNRENPC 116

[Close]

BLAST of CaUC05G092040 vs. ExPASy TrEMBL
Match: A0A5D3E3B8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold575G00600 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 4.0e-36
Identity = 80/120 (66.67%), Postives = 100/120 (83.33%), Query Frame = 0


Query: 1   MAALATPSVATIIL-LLLLLIPTGSTVNNTAASASCNGSHTEKCHLIGEEIANSE-FLME 60
           MAAL+TPS+ TIIL LLL+LI +G TVN+T ASASCN SH++KCHL+ +++A+ +  +ME
Sbjct: 1   MAALSTPSIGTIILFLLLILIRSGFTVNDTTASASCNNSHSKKCHLVRDDVADYKLIMME 60

Query: 61  SEIGRMLLNFNKFKGPQTQTPNKQAVASCGRPPRYDSCLGQKRQTPPQEKCNIYKRVPCG 119
            E+GRMLL+FNK+  PQT T NK +  SCGRPPRYDSCLG+KR TPPQEKC +YKRVPCG
Sbjct: 61  LEMGRMLLDFNKYTTPQTGTANKNSGGSCGRPPRYDSCLGEKRDTPPQEKCYVYKRVPCG 120

[Close]

BLAST of CaUC05G092040 vs. ExPASy TrEMBL
Match: A0A0A0LCI8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298050 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.5e-30
Identity = 74/116 (63.79%), Postives = 95/116 (81.90%), Query Frame = 0


Query: 1   MAALATPSVATIILLLLLLIPTGSTVNNTAASASCNGSHTEKCHLIGEEIANSEFLMESE 60
           MAAL+TPS+ TII LLLLLIP+G TVN+TAASASCN SH++KCHL+ +++ + EF+MESE
Sbjct: 1   MAALSTPSIGTII-LLLLLIPSGFTVNDTAASASCNSSHSKKCHLVRDDVGDYEFMMESE 60

Query: 61  IGRML-LNFNKFKGPQTQTPNKQAVA-SCGRPPRYDSCLGQKRQTPPQEKCNIYKR 115
           +G ML +N++K+K P T+  NKQ V   CGRPPRY+SCLG+KR T  QEKC +YKR
Sbjct: 61  MGWMLSINYDKYKSPPTRIANKQVVKDDCGRPPRYESCLGRKRDTLIQEKCAVYKR 115

[Close]

BLAST of CaUC05G092040 vs. ExPASy TrEMBL
Match: A0A0A0KVZ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G131140 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 4.2e-17
Identity = 55/112 (49.11%), Postives = 71/112 (63.39%), Query Frame = 0


Query: 7   PSVATIILLLLLLIPTGSTVNNTAASASCNGSHTEKCHLIGEEIANSEFLMESEIGRMLL 66
           P++A +IL LL      +T  N   S  C GS  E C L+G+E  +SEFLME+E  RMLL
Sbjct: 8   PTMAILILTLLFNPTRCNTTVNETTSEWCYGS--ENC-LVGDESLDSEFLMETETSRMLL 67

Query: 67  NFNKFKGPQTQTPNKQAVASCGRPPRYDSCLGQKRQTPPQEKCNIYKRV-PC 118
           +F   + P T  PN+Q+VA CGRPPRYDSC G++RQ P  E C++  R  PC
Sbjct: 68  DFQNLQTPGTIDPNRQSVAECGRPPRYDSCTGEERQIPNPENCDVRNRANPC 116

[Close]

BLAST of CaUC05G092040 vs. ExPASy TrEMBL
Match: A0A5D3BZL1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold121G001310 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 7.1e-17
Identity = 57/113 (50.44%), Postives = 74/113 (65.49%), Query Frame = 0


Query: 7   PSVATIILLLLL-LIPTGSTVNNTAASASCNGSHTEKCHLIGEEIANSEFLMESEIGRML 66
           P++A IIL+LL   I   +TVN TA    C GS  E C LIG+E ++SEFLME++  RML
Sbjct: 8   PTMAIIILILLFNTIGCNTTVNETAPE-WCYGS--ENC-LIGDESSDSEFLMETDTSRML 67

Query: 67  LNFNKFKGPQTQTPNKQAVASCGRPPRYDSCLGQKRQTPPQEKCNIYKRV-PC 118
           L+F   + P T  PN+Q+V  CGRPPRYDSC+G+KR     E C++  R  PC
Sbjct: 68  LDFQNLQTPSTNNPNRQSVPECGRPPRYDSCIGEKRSISNPENCDVRNRENPC 116

[Close]

BLAST of CaUC05G092040 vs. ExPASy TrEMBL
Match: A0A6J1G927 (uncharacterized protein LOC111452044 OS=Cucurbita moschata OX=3662 GN=LOC111452044 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.4e-12
Identity = 51/118 (43.22%), Postives = 67/118 (56.78%), Query Frame = 0


Query: 1   MAALATPSVATIILLLLLLIPTGSTVNNTAASASCNGSHTEKCHLIGEEIANSEFLMESE 60
           MAA A    A + +++LLL PT S    +    + + S   K +LIG++  +SEFLMES 
Sbjct: 1   MAAAAVIIPAAMAIMILLLNPTTSDALTSFKPLNNDTSAAGK-YLIGDQDLDSEFLMESH 60

Query: 61  IGRMLLNFNKFKGPQTQTPNKQAVASCGRPPRYDSCLGQKRQTPPQEKCNIYKR-VPC 118
           I R+L     F+  +T   NK +   CGRPPRYDSCLGQK   PP E C  + R  PC
Sbjct: 61  ISRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

The following BLAST results are available for this feature:

BLAST of CaUC05G092040 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0032826.1	8.3e-36	66.67	hypothetical protein E6C27_scaffold708G00860 [Cucumis melo var. makuwa] >TYK3038...	[more]
KGN57776.1	3.0e-30	63.79	hypothetical protein Csa_010194 [Cucumis sativus]	[more]
KAG7011063.1	1.7e-17	51.26	hypothetical protein SDJN02_27861, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6607065.1	8.6e-17	50.42	hypothetical protein SDJN03_00407, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAA0042447.1	1.5e-16	50.44	hypothetical protein E6C27_scaffold266G00270 [Cucumis melo var. makuwa] >TYK0350...	[more]

BLAST of CaUC05G092040 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC05G092040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E3B8	4.0e-36	66.67	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LCI8	1.5e-30	63.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298050 PE=4 SV=1	[more]
A0A0A0KVZ2	4.2e-17	49.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G131140 PE=4 SV=1	[more]
A0A5D3BZL1	7.1e-17	50.44	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1G927	1.4e-12	43.22	uncharacterized protein LOC111452044 OS=Cucurbita moschata OX=3662 GN=LOC1114520...	[more]

BLAST of CaUC05G092040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC05G092040.1	CaUC05G092040.1	mRNA