CaUC05G091650 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC05G091650
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Major latex-like protein
Location	Ciama_Chr05: 13271749 .. 13271992 (+)
RNA-Seq Expression	CaUC05G091650
Synteny	CaUC05G091650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAGTGGTGGATGATGTGAAGAAATACATGATCTATGAACTTGTTGGAGGAGATGAACTTGAAGTAAAGGGTAAAACTTGAAGTAATTAATGGAGGGTTGAACAAAGTAGGAGGAAGCTTTGCAAAATGGACTATTGAGTTTGAAAAGACAAATGAAAATGTGCCTTCACCAGAAAGCTACTTGGGATTGTTTTCTAAGATTTCCAAAGCCATTGATGCTTATTTTTCCAAGAATAACTAA

mRNA sequence

ATGAGAGTGGTGGATGATGTGAAGAAATACATGATCTATGAACTTGTTGGAGGAGATGAACTTGAAGTAAAGGTAATTAATGGAGGGTTGAACAAAGTAGGAGGAAGCTTTGCAAAATGGACTATTGAGTTTGAAAAGACAAATGAAAATGTGCCTTCACCAGAAAGCTACTTGGGATTGTTTTCTAAGATTTCCAAAGCCATTGATGCTTATTTTTCCAAGAATAACTAA

Coding sequence (CDS)

ATGAGAGTGGTGGATGATGTGAAGAAATACATGATCTATGAACTTGTTGGAGGAGATGAACTTGAAGTAAAGGTAATTAATGGAGGGTTGAACAAAGTAGGAGGAAGCTTTGCAAAATGGACTATTGAGTTTGAAAAGACAAATGAAAATGTGCCTTCACCAGAAAGCTACTTGGGATTGTTTTCTAAGATTTCCAAAGCCATTGATGCTTATTTTTCCAAGAATAACTAA

Protein sequence

MRVVDDVKKYMIYELVGGDELEVKVINGGLNKVGGSFAKWTIEFEKTNENVPSPESYLGLFSKISKAIDAYFSKNN

Homology

[Close]

BLAST of CaUC05G091650 vs. NCBI nr
Match: XP_038877477.1 (kirola-like [Benincasa hispida])

HSP 1 Score: 124.0 bits (310), Expect = 5.5e-25
Identity = 61/83 (73.49%), Postives = 70/83 (84.34%), Query Frame = 0


Query: 1   MRVVDDVKKYMIYELVGGDELEV--------KVINGGLNKVGGSFAKWTIEFEKTNENVP 60
           +RVVDDVKK ++YE+V GD L++        +VINGGLNKVGGSFAKWT+EFEK NENVP
Sbjct: 73  LRVVDDVKKCIVYEIVEGDVLKIYKVFNVKLEVINGGLNKVGGSFAKWTVEFEKENENVP 132

Query: 61  SPESYLGLFSKISKAIDAYFSKN 76
           SPESYLGLF+KISK IDAYFSKN
Sbjct: 133 SPESYLGLFAKISKGIDAYFSKN 155

[Close]

BLAST of CaUC05G091650 vs. NCBI nr
Match: XP_038877995.1 (kirola-like [Benincasa hispida])

HSP 1 Score: 106.3 bits (264), Expect = 1.2e-19
Identity = 50/83 (60.24%), Postives = 63/83 (75.90%), Query Frame = 0


Query: 1   MRVVDDVKKYMIYELVGGD--------ELEVKVINGGLNKVGGSFAKWTIEFEKTNENVP 60
           MRVVDD K+Y+IYE V GD          +++ +NGGLNKVGGSFAKWT+E+EK  ENVP
Sbjct: 74  MRVVDDTKRYIIYEAVEGDMRKYYKVLRTKLEAVNGGLNKVGGSFAKWTVEYEKAYENVP 133

Query: 61  SPESYLGLFSKISKAIDAYFSKN 76
           SPE+Y+ LF +ISK +DAY +KN
Sbjct: 134 SPENYMELFVRISKGVDAYLNKN 156

[Close]

BLAST of CaUC05G091650 vs. NCBI nr
Match: XP_038887097.1 (MLP-like protein 31 [Benincasa hispida])

HSP 1 Score: 105.5 bits (262), Expect = 2.0e-19
Identity = 50/83 (60.24%), Postives = 64/83 (77.11%), Query Frame = 0


Query: 1   MRVVDDVKKYMIYELVGGDEL--------EVKVINGGLNKVGGSFAKWTIEFEKTNENVP 60
           MR+VDD KK+++YE+V GD L        +++ +NGGLNKV G+FAKWTIE+EK NENVP
Sbjct: 72  MRLVDDAKKFIVYEIVEGDALKFYKVFRAKLEAVNGGLNKVEGNFAKWTIEYEKANENVP 131

Query: 61  SPESYLGLFSKISKAIDAYFSKN 76
           SPE+YL L  K+SK +DAY SKN
Sbjct: 132 SPENYLELAVKVSKGLDAYISKN 154

[Close]

BLAST of CaUC05G091650 vs. NCBI nr
Match: XP_022982734.1 (MLP-like protein 31 [Cucurbita maxima])

HSP 1 Score: 104.8 bits (260), Expect = 3.4e-19
Identity = 53/84 (63.10%), Postives = 65/84 (77.38%), Query Frame = 0


Query: 1   MRVVDDVKKYMIYELVGGDEL--------EVKVINGGLNKVG-GSFAKWTIEFEKTNENV 60
           +RVVDDVKKY+IYE V GD L        + +V+NGGL+KVG G+F KWT+EFEK N+NV
Sbjct: 73  VRVVDDVKKYIIYEAVEGDPLKEFKVLRAKFEVVNGGLSKVGRGNFTKWTVEFEKANQNV 132

Query: 61  PSPESYLGLFSKISKAIDAYFSKN 76
            SP++YL LF KISK +DAYFSKN
Sbjct: 133 ASPQNYLELFVKISKGVDAYFSKN 156

[Close]

BLAST of CaUC05G091650 vs. NCBI nr
Match: XP_004149789.1 (MLP-like protein 34 [Cucumis sativus] >KGN57834.1 hypothetical protein Csa_009686 [Cucumis sativus])

HSP 1 Score: 103.2 bits (256), Expect = 1.0e-18
Identity = 49/83 (59.04%), Postives = 63/83 (75.90%), Query Frame = 0


Query: 1   MRVVDDVKKYMIYELVGGDEL--------EVKVINGGLNKVGGSFAKWTIEFEKTNENVP 60
           MRVVDDVKK ++YE + GD L        +++ +NGGLNKVGG+FAKWTIE++K NENVP
Sbjct: 72  MRVVDDVKKSIVYEFMDGDVLKHYKVFRAKLEAVNGGLNKVGGNFAKWTIEYQKANENVP 131

Query: 61  SPESYLGLFSKISKAIDAYFSKN 76
           SPE+Y+ L  K+SK +DAY  KN
Sbjct: 132 SPETYMELAVKVSKGLDAYIFKN 154

[Close]

BLAST of CaUC05G091650 vs. ExPASy Swiss-Prot
Match: Q93VR4 (MLP-like protein 423 OS=Arabidopsis thaliana OX=3702 GN=MLP423 PE=2 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 5.5e-04
Identity = 29/78 (37.18%), Postives = 36/78 (46.15%), Query Frame = 0


Query: 1   MRVVDDVKKYMIYELVGGDELE-VKVINGGLN---KVGGSFAKWTIEFEKTNENVPSPES 60
           +  VD   K M Y ++GG+ LE  K   G +    K GGS  KW+ EFEKT   +  P  
Sbjct: 74  IEAVDLENKSMSYSIIGGEMLEYYKTFKGTITVIPKDGGSLLKWSGEFEKTAHEIDDPHV 133

Query: 61  YLGLFSKISKAIDAYFSK 75
                 K  K ID Y  K
Sbjct: 134 IKDFAVKNFKEIDEYLLK 151

[Close]

BLAST of CaUC05G091650 vs. ExPASy TrEMBL
Match: A0A6J1J5E0 (MLP-like protein 31 OS=Cucurbita maxima OX=3661 GN=LOC111481514 PE=3 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.7e-19
Identity = 53/84 (63.10%), Postives = 65/84 (77.38%), Query Frame = 0


Query: 1   MRVVDDVKKYMIYELVGGDEL--------EVKVINGGLNKVG-GSFAKWTIEFEKTNENV 60
           +RVVDDVKKY+IYE V GD L        + +V+NGGL+KVG G+F KWT+EFEK N+NV
Sbjct: 73  VRVVDDVKKYIIYEAVEGDPLKEFKVLRAKFEVVNGGLSKVGRGNFTKWTVEFEKANQNV 132

Query: 61  PSPESYLGLFSKISKAIDAYFSKN 76
            SP++YL LF KISK +DAYFSKN
Sbjct: 133 ASPQNYLELFVKISKGVDAYFSKN 156

[Close]

BLAST of CaUC05G091650 vs. ExPASy TrEMBL
Match: A0A0A0LA34 (Bet_v_1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G342860 PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 4.8e-19
Identity = 49/83 (59.04%), Postives = 63/83 (75.90%), Query Frame = 0


Query: 1   MRVVDDVKKYMIYELVGGDEL--------EVKVINGGLNKVGGSFAKWTIEFEKTNENVP 60
           MRVVDDVKK ++YE + GD L        +++ +NGGLNKVGG+FAKWTIE++K NENVP
Sbjct: 72  MRVVDDVKKSIVYEFMDGDVLKHYKVFRAKLEAVNGGLNKVGGNFAKWTIEYQKANENVP 131

Query: 61  SPESYLGLFSKISKAIDAYFSKN 76
           SPE+Y+ L  K+SK +DAY  KN
Sbjct: 132 SPETYMELAVKVSKGLDAYIFKN 154

[Close]

BLAST of CaUC05G091650 vs. ExPASy TrEMBL
Match: A0A5D3BR82 (MLP-like protein 423 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00800 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 6.3e-19
Identity = 48/83 (57.83%), Postives = 64/83 (77.11%), Query Frame = 0


Query: 1   MRVVDDVKKYMIYELVGGDEL--------EVKVINGGLNKVGGSFAKWTIEFEKTNENVP 60
           MR+VDDVKK ++YE++ GD L        +++ +NGGLNKVGG+FAKWTIE++K NENVP
Sbjct: 72  MRLVDDVKKSIVYEIMDGDVLKYYKVFRAKLEAVNGGLNKVGGNFAKWTIEYQKANENVP 131

Query: 61  SPESYLGLFSKISKAIDAYFSKN 76
           SPE+Y+ L  K+SK +DAY  KN
Sbjct: 132 SPENYMELAVKVSKGLDAYIFKN 154

[Close]

BLAST of CaUC05G091650 vs. ExPASy TrEMBL
Match: A0A1S3C4M0 (MLP-like protein 423 OS=Cucumis melo OX=3656 GN=LOC103496832 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 6.3e-19
Identity = 48/83 (57.83%), Postives = 64/83 (77.11%), Query Frame = 0


Query: 1   MRVVDDVKKYMIYELVGGDEL--------EVKVINGGLNKVGGSFAKWTIEFEKTNENVP 60
           MR+VDDVKK ++YE++ GD L        +++ +NGGLNKVGG+FAKWTIE++K NENVP
Sbjct: 72  MRLVDDVKKSIVYEIMDGDVLKYYKVFRAKLEAVNGGLNKVGGNFAKWTIEYQKANENVP 131

Query: 61  SPESYLGLFSKISKAIDAYFSKN 76
           SPE+Y+ L  K+SK +DAY  KN
Sbjct: 132 SPENYMELAVKVSKGLDAYIFKN 154

[Close]

BLAST of CaUC05G091650 vs. ExPASy TrEMBL
Match: A0A0A0LCN2 (Bet_v_1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G340350 PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.4e-18
Identity = 51/84 (60.71%), Postives = 65/84 (77.38%), Query Frame = 0


Query: 1   MRVVDDVKKYMIYELVGGDELE--------VKVINGGLNKV-GGSFAKWTIEFEKTNENV 60
           ++VVDD+KKY+IYE V GD L+        ++V+NG L+KV GGSFAKWTI+F K NENV
Sbjct: 74  LKVVDDMKKYIIYEAVEGDVLKNYKVFTTRLEVVNGSLSKVGGGSFAKWTIDFVKANENV 133

Query: 61  PSPESYLGLFSKISKAIDAYFSKN 76
           PSPE+YL +F  +SK +DAYFSKN
Sbjct: 134 PSPENYLEMFINMSKGVDAYFSKN 157

[Close]

BLAST of CaUC05G091650 vs. TAIR 10
Match: AT5G28010.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein )

HSP 1 Score: 47.4 bits (111), Expect = 6.1e-06
Identity = 27/81 (33.33%), Postives = 44/81 (54.32%), Query Frame = 0


Query: 1   MRVVDDVKKYMIYELVGGD----------ELEVKVINGGLNKVGGSFAKWTIEFEKTNEN 60
           + +V+  KK + + ++ GD           ++V    GG     GS  KW IE+EK +EN
Sbjct: 85  IELVEPEKKLIKFRVIEGDVMAEYKSFLITIQVTPKEGGT----GSVVKWHIEYEKIDEN 144

Query: 61  VPSPESYLGLFSKISKAIDAY 72
           VP PE+ L  F++++K ID +
Sbjct: 145 VPHPENLLPFFAEMTKEIDEH 161

[Close]

BLAST of CaUC05G091650 vs. TAIR 10
Match: AT5G28000.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein )

HSP 1 Score: 45.8 bits (107), Expect = 1.8e-05
Identity = 26/77 (33.77%), Postives = 44/77 (57.14%), Query Frame = 0


Query: 1   MRVVDDVKKYMIYELVGGDELEVK----VINGGLNKVG--GSFAKWTIEFEKTNENVPSP 60
           + +V+  KK + + ++ GD L V     +      K G  GS AKW +E+EK + NVP P
Sbjct: 83  IELVEPEKKLIKFRVIEGDVLAVYKNFFITISVTPKEGGVGSVAKWHLEYEKNDVNVPDP 142

Query: 61  ESYLGLFSKISKAIDAY 72
           E++L   ++++K ID +
Sbjct: 143 ENFLPFLAEMTKEIDEH 159

[Close]

BLAST of CaUC05G091650 vs. TAIR 10
Match: AT1G24020.1 (MLP-like protein 423 )

HSP 1 Score: 44.7 bits (104), Expect = 3.9e-05
Identity = 29/78 (37.18%), Postives = 36/78 (46.15%), Query Frame = 0


Query: 1   MRVVDDVKKYMIYELVGGDELE-VKVINGGLN---KVGGSFAKWTIEFEKTNENVPSPES 60
           +  VD   K M Y ++GG+ LE  K   G +    K GGS  KW+ EFEKT   +  P  
Sbjct: 74  IEAVDLENKSMSYSIIGGEMLEYYKTFKGTITVIPKDGGSLLKWSGEFEKTAHEIDDPHV 133

Query: 61  YLGLFSKISKAIDAYFSK 75
                 K  K ID Y  K
Sbjct: 134 IKDFAVKNFKEIDEYLLK 151

[Close]

BLAST of CaUC05G091650 vs. TAIR 10
Match: AT1G24020.2 (MLP-like protein 423 )

HSP 1 Score: 44.7 bits (104), Expect = 3.9e-05
Identity = 29/78 (37.18%), Postives = 36/78 (46.15%), Query Frame = 0


Query: 1   MRVVDDVKKYMIYELVGGDELE-VKVINGGLN---KVGGSFAKWTIEFEKTNENVPSPES 60
           +  VD   K M Y ++GG+ LE  K   G +    K GGS  KW+ EFEKT   +  P  
Sbjct: 74  IEAVDLENKSMSYSIIGGEMLEYYKTFKGTITVIPKDGGSLLKWSGEFEKTAHEIDDPHV 133

Query: 61  YLGLFSKISKAIDAYFSK 75
                 K  K ID Y  K
Sbjct: 134 IKDFAVKNFKEIDEYLLK 151

The following BLAST results are available for this feature:

BLAST of CaUC05G091650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877477.1	5.5e-25	73.49	kirola-like [Benincasa hispida]	[more]
XP_038877995.1	1.2e-19	60.24	kirola-like [Benincasa hispida]	[more]
XP_038887097.1	2.0e-19	60.24	MLP-like protein 31 [Benincasa hispida]	[more]
XP_022982734.1	3.4e-19	63.10	MLP-like protein 31 [Cucurbita maxima]	[more]
XP_004149789.1	1.0e-18	59.04	MLP-like protein 34 [Cucumis sativus] >KGN57834.1 hypothetical protein Csa_00968...	[more]

BLAST of CaUC05G091650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93VR4	5.5e-04	37.18	MLP-like protein 423 OS=Arabidopsis thaliana OX=3702 GN=MLP423 PE=2 SV=1	[more]

BLAST of CaUC05G091650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J5E0	1.7e-19	63.10	MLP-like protein 31 OS=Cucurbita maxima OX=3661 GN=LOC111481514 PE=3 SV=1	[more]
A0A0A0LA34	4.8e-19	59.04	Bet_v_1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G342860 PE=...	[more]
A0A5D3BR82	6.3e-19	57.83	MLP-like protein 423 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451...	[more]
A0A1S3C4M0	6.3e-19	57.83	MLP-like protein 423 OS=Cucumis melo OX=3656 GN=LOC103496832 PE=3 SV=1	[more]
A0A0A0LCN2	1.4e-18	60.71	Bet_v_1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G340350 PE=...	[more]

BLAST of CaUC05G091650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G28010.1	6.1e-06	33.33	Polyketide cyclase/dehydrase and lipid transport superfamily protein	[more]
AT5G28000.1	1.8e-05	33.77	Polyketide cyclase/dehydrase and lipid transport superfamily protein	[more]
AT1G24020.1	3.9e-05	37.18	MLP-like protein 423	[more]
AT1G24020.2	3.9e-05	37.18	MLP-like protein 423	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000916	Bet v I/Major latex protein	PFAM	PF00407	Bet_v_1	coord: 3..74 e-value: 3.5E-9 score: 36.7
IPR023393	START-like domain superfamily	GENE3D	3.30.530.20		coord: 1..75 e-value: 4.9E-15 score: 57.8
None	No IPR available	PANTHER	PTHR31907	MLP-LIKE PROTEIN 423	coord: 2..71
None	No IPR available	PANTHER	PTHR31907:SF52	MAJOR LATEX PROTEIN	coord: 2..71
None	No IPR available	SUPERFAMILY	55961	Bet v1-like	coord: 3..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC05G091650.1	CaUC05G091650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response