CaUC05G091020 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC05G091020
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionCaspase-6
LocationCiama_Chr05: 11902379 .. 11905597 (+)
RNA-Seq ExpressionCaUC05G091020
SyntenyCaUC05G091020
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGTTGTCTACAATTTAGAGAAATCAGATCGGACTGTCTGATTTCAATCGTGTGGTTTATATTGCGTAAGGCAGATGGAAGTCCATAGACATTCAACGCATCGTAGCATTTCGCAGCAAAAGATTAGTACTTAGTACCCTCGTAAAACCCTCGTCTCCATCTTCCTCAATTTTCATCAAACCAATAAGTTCACTGCTAAAATGGCTTGGCGCTCATCTGGATCTCTATCTCGCTCCCTTCTTTCCTCTCTTAGGGCTTCTTCTCTCCGATCGGCTCCTTCTCTTCCTCGCCTCCGCCCGCCACCTCTCGCTGCTCAACCCCGCCTTCAATCTCGTCGCCTTTCTTTTTCGACTTCGAGGTAATTCACAAGTTTCTAACTTACCTGTTTCGTTTCTGTGCGAAATTAACTGACGAATGAATTTCCAAGCAAGAAATGCAGTTGAATTGCGATGTATTTGATGCTAGATACTTGTTTCTGTTGCCCTGTTGATCTCTGTTTACTATTGATTCCTACTTATGTATAATTTTAAATTATCTGGTTATTGAACTTCAATGTATTTTAGGTTGAATTTGAGCTATTTATGTTTTTCTTCCTTTAATTTCAGATTTTTTTTTAAAACTTTATTATTATTATTATTATTAGGGTTGTTTTGCTAAAATATTTATAAATATAACAACAATTTTGTCATTTAAAATAATTTCCCATATTATTATCATTCCCTATTTTTTTTTAATTAGTTTTACGAAAAAGAGTTACTTGTCAAGTTATTTGTGATTGCATTAAAAAAGAGTTACATAATTCTTGTACACATTATCCCTTACATTCCGACGCAACATTAGACCTAACCATTTTCTGCTTTAAGTCGAAATAATGTTTTAAACCCAACTCATATCACATATAACTTTCCACATGTTAGGTATAGGTTATTGAAACAAAATGTCAGACTGTCAGTTGATGATGTTCATTTTAAATATCCATAAATAACTTGTCACATTGCAGTGGTTACTTTTCACTAATGTCGGGGAGGTCTGGTAAACTGTAATTAATGGATAGAGAAACTGAAGTTTTTAGATTTATGGGAACCAGTTGAAAAGTAATTTAGCCAAACACTTCAAGAACTTACTGAAAGGAGGTATTGTAGAAAGGAGTGTAGTTATGAAAATTTAGAGGTAGAGCCCCAGAGAGAAAAAAGCTAACAAATATGCTCCCCTATTTACTAGATCTTTTTACACTCTTTTAGTCTTTTTGGAACATCTTACTATTTCTTTCCAATCATAAATACCTATAATTACTCGAGAAGCATTATCCCAATTTGAAGCACGAAGAAAAGTCACTTGAGTTTCTGATTTTTGGGTGGCCACACTCCCAAAGAAGGGAGTGGTCACTCACTCTAGCTTCACCCAACTGCCATTGATCATTTTTTGCTTTGGGCCACCCCTTACTCTACCGTTATAGTAGGGGTATGGTGTTCATGACAAGGAAATATCTTGACCATGAGAACCACATGACAATGTAAAGCTTATCCTTAACCTAGAGATTCATCGCCCACTAGTTTCAAATATACCAAAGAAGGAAAAAAAAGAAAAAAAAACGTCAAATTTTCTTAGTTTGCCCCTTCCTGAAGAAGAAAATCTCTAAAGGGATTTTATATATCTGTAGCTGCATTTTTGGGATCTTTGGAAACTGAGAGGAATTACGTGAGATTTTCCTCCCCGTCTTCTTTGTAGGTTACCTCCCCTTCCAGATTACTCACTAAGTTTTGGCTTTGAGGCAAACTCTCAGTTTTTTCTGGTAGACTCGGCCAATTCTAACATCTGTTTGCAACTACCAGGGGGAAATATTACTTTTAGCACCAATTTATATGCTTCTCAAGTTTAACACATTTCAACTGTCTCCACGTTAGTTACCAATTTTGTGAGTATCATATTGCACCAGCTTGGTTTTCTGAGTTGTAGATGAGACACCATTGCCTTCTATCAATATGCTGGACTTGGGCACCTCCATGGTGCCTTCAGTGGCCCACCAAAGAAGGTTTCATTGACCACTTTATTCATTAAAAGAGCATGGTAGAGCCATTGTTTTAATTGAATGTTTTAATTGAAAGTTGATCAGAACTTTGGAGAATTACTTTTCAGGTATACACAGCCTGTCAAGTTTCTTATTACCTTAACTATGGCCTTCTCAACTCTGCTGAAATCAAAGTTATTTAATCACATGAAAGGGAACCCCAGAAACATTTTCAATGTATTCTAGTCTCCTCTACTCCATCTGCTAATTAAAAAATTTCTCACATCATTACTTATTATCTTGTCTCTCTCTTGATCAACTTTCATTGGCAGGCTCCTTTTTGTGGTCCTTTTGGATGAGGGGATTTCCTCTTTGCCCACTCTTAAGGATGTCCTCTTTTCGCTCTTTTGTTTATAATACAGTTTCTCAGTAAAAAAATCTCTGTAGTGTTAAAAAATCTCTGTAATGTTTGCTCTGTGTTGCTTGATTGCAATTTTCTGGATTTCTTTCATGAGTTAGAGGCATGATTTACCCTTTTTTGTTTCAAAATATCATTTCCAGGAACTTGGGAGAACTGGGATGTCCTCTTTTCGCTCTTTTGTTTATAATACAGTTTCTCAGTTCAAAAATCTGTGGTGTCAAAAAATCTCTGTAATGTTAGCTCTGTGTTGCTTGATTGCAATTTTCTGGATTTCTTTCATGAGTTAGAGGCATGATTTACCCTTTTTTGTTTCAAAATATCATTTCCAGGAACTTGGGAGAACTGGGATGCACACAGTCTCTTCTGCCCATGCACGGCATCATGGGTGCTACATTCCTGACATCCCACCTATGTGTTAGCGCACGGGCTTTTTGCGAGCTGTCTCATGGTACCTTCTGCCGTACTTGTCAGGATCGCTAGTATCCTCTTTGTGAGTCTTGTTTACAGGAAACATGAAAAACATATAGTAAATGTTTCTTCATGAGGTCATTGTTGCATTATTGAGTGTGGTTTTTTTTTTTATAATCATGATATCATAACGTCTCAGTGAATTTTTGTGTTTGGATGATATGATGTGACATAAATTAGGCAGTTATTTTTGTACCGTTAAAATGTCATTAATTAGCAGAAATTGGGATTGGGATTGATAGGAAGGAATGGAAAAGATGGGTGATGCACGAGGACATTCTATCATACGAAAGCGGGAGACTGTCGCAACATTTGTAG

mRNA sequence

ATGGTTAGAAATCAGATCGGACTGTCTGATTTCAATCGTGTGGTTTATATTGCATGGAAGTCCATAGACATTCAACGCATCGTAGCATTTCGCAGCAAAAGATTAGTACTTAGTACCCTCGTAAAACCCTCGTCTCCATCTTCCTCAATTTTCATCAAACCAATAAGTTCACTGCTAAAATGGCTTGGCGCTCATCTGGATCTCTATCTCGCTCCCTTCTTTCCTCTCTTAGGGCTTCTTCTCTCCGATCGGCTCCTTCTCTTCCTCGCCTCCGCCCGCCACCTCTCGCTGCTCAACCCCGCCTTCAATCTCGTCGCCTTTCTTTTTCGACTTCGAGATGAGACACCATTGCCTTCTATCAATATGCTGGACTTGGGCACCTCCATGGTGCCTTCAGTGGCCCACCAAAGAAGGTATACACAGCCTGTCAAGTTTCTTATTACCTTAACTATGGCCTTCTCAACTCTGCTGAAATCAAAGTTATTTAATCACATGAAAGGGAACCCCAGAAACATTTTCAATGAACTTGGGAGAACTGGGATGTCCTCTTTTCGCTCTTTTGTTTATAATACAGTTTCTCAGTTCAAAAATCTGTGGTGTCAAAAAATCTCTGTAATGAACTTGGGAGAACTGGGATGCACACAGTCTCTTCTGCCCATGCACGGCATCATGGGTGCTACATTCCTGACATCCCACCTATGTGTTAGCGCACGGGCTTTTTGCGAGCTGTCTCATGAAATTGGGATTGGGATTGATAGGAAGGAATGGAAAAGATGGGTGATGCACGAGGACATTCTATCATACGAAAGCGGGAGACTGTCGCAACATTTGTAG

Coding sequence (CDS)

ATGGTTAGAAATCAGATCGGACTGTCTGATTTCAATCGTGTGGTTTATATTGCATGGAAGTCCATAGACATTCAACGCATCGTAGCATTTCGCAGCAAAAGATTAGTACTTAGTACCCTCGTAAAACCCTCGTCTCCATCTTCCTCAATTTTCATCAAACCAATAAGTTCACTGCTAAAATGGCTTGGCGCTCATCTGGATCTCTATCTCGCTCCCTTCTTTCCTCTCTTAGGGCTTCTTCTCTCCGATCGGCTCCTTCTCTTCCTCGCCTCCGCCCGCCACCTCTCGCTGCTCAACCCCGCCTTCAATCTCGTCGCCTTTCTTTTTCGACTTCGAGATGAGACACCATTGCCTTCTATCAATATGCTGGACTTGGGCACCTCCATGGTGCCTTCAGTGGCCCACCAAAGAAGGTATACACAGCCTGTCAAGTTTCTTATTACCTTAACTATGGCCTTCTCAACTCTGCTGAAATCAAAGTTATTTAATCACATGAAAGGGAACCCCAGAAACATTTTCAATGAACTTGGGAGAACTGGGATGTCCTCTTTTCGCTCTTTTGTTTATAATACAGTTTCTCAGTTCAAAAATCTGTGGTGTCAAAAAATCTCTGTAATGAACTTGGGAGAACTGGGATGCACACAGTCTCTTCTGCCCATGCACGGCATCATGGGTGCTACATTCCTGACATCCCACCTATGTGTTAGCGCACGGGCTTTTTGCGAGCTGTCTCATGAAATTGGGATTGGGATTGATAGGAAGGAATGGAAAAGATGGGTGATGCACGAGGACATTCTATCATACGAAAGCGGGAGACTGTCGCAACATTTGTAG

Protein sequence

MVRNQIGLSDFNRVVYIAWKSIDIQRIVAFRSKRLVLSTLVKPSSPSSSIFIKPISSLLKWLGAHLDLYLAPFFPLLGLLLSDRLLLFLASARHLSLLNPAFNLVAFLFRLRDETPLPSINMLDLGTSMVPSVAHQRRYTQPVKFLITLTMAFSTLLKSKLFNHMKGNPRNIFNELGRTGMSSFRSFVYNTVSQFKNLWCQKISVMNLGELGCTQSLLPMHGIMGATFLTSHLCVSARAFCELSHEIGIGIDRKEWKRWVMHEDILSYESGRLSQHL
Homology
[Close]
BLAST of CaUC05G091020 vs. NCBI nr
Match: PPD70527.1 (hypothetical protein GOBAR_DD32593 [Gossypium barbadense])

HSP 1 Score: 97.1 bits (240), Expect = 2.6e-16
Identity = 44/61 (72.13%), Postives = 48/61 (78.69%), Query Frame = 0 

Query: 207  NLGELGCTQSLLPMHGIMGATFLTSHLCVSARAFCELSHEIGIGIDRKEWKRWVMHEDIL 266
            NLGELGC QS LP+H ++    LTSHL VS RA CELSH IGIGIDR+EWKRWVMH D L
Sbjct: 963  NLGELGCVQSFLPLHNLVPMACLTSHLTVSVRACCELSHGIGIGIDREEWKRWVMHVDFL 1022

Query: 267  S 268
            S
Sbjct: 1023 S 1023

[Close]
BLAST of CaUC05G091020 vs. NCBI nr
Match: EOX98394.1 (Uncharacterized protein TCM_007167 [Theobroma cacao])

HSP 1 Score: 96.3 bits (238), Expect = 4.5e-16
Identity = 43/70 (61.43%), Postives = 50/70 (71.43%), Query Frame = 0 

Query: 207 NLGELGCTQSLLPMHGIMGATFLTSHLCVSARAFCELSHEIGIGIDRKEWKRWVMHEDIL 266
           N GELGC QS LP+H ++    LTSHL V+ RA CELSH IGIGIDR+EWKRWVMH D  
Sbjct: 53  NFGELGCVQSFLPLHSMVATARLTSHLTVNVRACCELSHGIGIGIDREEWKRWVMHVDFQ 112

Query: 267 SYESGRLSQH 277
           S +  R+  H
Sbjct: 113 SAKGERMIPH 122

[Close]
BLAST of CaUC05G091020 vs. NCBI nr
Match: MBA0833556.1 (hypothetical protein [Gossypium armourianum])

HSP 1 Score: 95.9 bits (237), Expect = 5.8e-16
Identity = 54/109 (49.54%), Postives = 64/109 (58.72%), Query Frame = 0 

Query: 172 IFNELGRTGMSSFRSFVYNT----------VSQFKNLWCQKISV---MNLGELGCTQSLL 231
           IF  L R+ MS+ R+    T           S    L  +++S     NLGELGC QS L
Sbjct: 128 IFGSLSRSVMSAARAPSLRTPPPMPRVRPPTSSAPRLQSRRLSFAPSRNLGELGCVQSFL 187

Query: 232 PMHGIMGATFLTSHLCVSARAFCELSHEIGIGIDRKEWKRWVMHEDILS 268
           P+H ++    LTSHL VS RA CELSH IGIGIDR+EWKRWVMH D  S
Sbjct: 188 PLHNLVPMACLTSHLTVSVRACCELSHGIGIGIDREEWKRWVMHVDFRS 236

[Close]
BLAST of CaUC05G091020 vs. NCBI nr
Match: PPS18108.1 (hypothetical protein GOBAR_AA02479 [Gossypium barbadense])

HSP 1 Score: 94.7 bits (234), Expect = 1.3e-15
Identity = 57/129 (44.19%), Postives = 71/129 (55.04%), Query Frame = 0 

Query: 172 IFNELGRTGMSSFRSFVYNT----------VSQFKNLWCQKISV---MNLGELGCTQSLL 231
           IF  L R+ MS+ R+    T           S    L  +++S     NLGELGC QS L
Sbjct: 769 IFGSLSRSVMSAARAPSLRTPAPMPRVRLPTSSAPRLQSRRLSFAPSRNLGELGCVQSFL 828

Query: 232 PMHGIMGATFLTSHLCVSARAFCELSHEIGIGIDRKEWKRWVMHEDI----------LSY 278
           P+H ++    LTSHL V+ RA CELSH IGIGIDR+EWKRWVMH D            S+
Sbjct: 829 PLHNLVPMPCLTSHLTVNVRACCELSHGIGIGIDREEWKRWVMHVDFRSAKGENDSTASH 888

[Close]
BLAST of CaUC05G091020 vs. NCBI nr
Match: MBA0716969.1 (hypothetical protein [Gossypium laxum])

HSP 1 Score: 89.7 bits (221), Expect = 4.2e-14
Identity = 53/110 (48.18%), Postives = 63/110 (57.27%), Query Frame = 0 

Query: 172 IFNELGRTGMSSFRSFVYNT----------VSQFKNLWCQKISV---MNLGELGCTQSLL 231
           IF  L R+ MS+ R+    T           S    L  +++S     NLGELGC QS L
Sbjct: 376 IFGSLSRSVMSAARAPSLRTPPPMPRVRPPTSSAPRLQSRRLSFAPSRNLGELGCVQSFL 435

Query: 232 PMHGIMGATFLTSHLCVSARAFCELSHE-IGIGIDRKEWKRWVMHEDILS 268
           P+H ++    LTSHL VS RA CELSHE  GIGIDR+EWKRWV H D  S
Sbjct: 436 PLHNLVPMACLTSHLTVSVRACCELSHEGTGIGIDREEWKRWVKHVDFRS 485

[Close]
BLAST of CaUC05G091020 vs. ExPASy TrEMBL
Match: A0A061E028 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_007167 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.2e-16
Identity = 43/70 (61.43%), Postives = 50/70 (71.43%), Query Frame = 0 

Query: 207 NLGELGCTQSLLPMHGIMGATFLTSHLCVSARAFCELSHEIGIGIDRKEWKRWVMHEDIL 266
           N GELGC QS LP+H ++    LTSHL V+ RA CELSH IGIGIDR+EWKRWVMH D  
Sbjct: 53  NFGELGCVQSFLPLHSMVATARLTSHLTVNVRACCELSHGIGIGIDREEWKRWVMHVDFQ 112

Query: 267 SYESGRLSQH 277
           S +  R+  H
Sbjct: 113 SAKGERMIPH 122

[Close]
BLAST of CaUC05G091020 vs. ExPASy TrEMBL
Match: A0A7J9JGM3 (Uncharacterized protein (Fragment) OS=Gossypium armourianum OX=34283 GN=Goarm_005991 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.8e-16
Identity = 54/109 (49.54%), Postives = 64/109 (58.72%), Query Frame = 0 

Query: 172 IFNELGRTGMSSFRSFVYNT----------VSQFKNLWCQKISV---MNLGELGCTQSLL 231
           IF  L R+ MS+ R+    T           S    L  +++S     NLGELGC QS L
Sbjct: 128 IFGSLSRSVMSAARAPSLRTPPPMPRVRPPTSSAPRLQSRRLSFAPSRNLGELGCVQSFL 187

Query: 232 PMHGIMGATFLTSHLCVSARAFCELSHEIGIGIDRKEWKRWVMHEDILS 268
           P+H ++    LTSHL VS RA CELSH IGIGIDR+EWKRWVMH D  S
Sbjct: 188 PLHNLVPMACLTSHLTVSVRACCELSHGIGIGIDREEWKRWVMHVDFRS 236

[Close]
BLAST of CaUC05G091020 vs. ExPASy TrEMBL
Match: A0A2P5YRA6 (Glyco_hyd_65N_2 domain-containing protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA02479 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 6.3e-16
Identity = 57/129 (44.19%), Postives = 71/129 (55.04%), Query Frame = 0 

Query: 172 IFNELGRTGMSSFRSFVYNT----------VSQFKNLWCQKISV---MNLGELGCTQSLL 231
           IF  L R+ MS+ R+    T           S    L  +++S     NLGELGC QS L
Sbjct: 769 IFGSLSRSVMSAARAPSLRTPAPMPRVRLPTSSAPRLQSRRLSFAPSRNLGELGCVQSFL 828

Query: 232 PMHGIMGATFLTSHLCVSARAFCELSHEIGIGIDRKEWKRWVMHEDI----------LSY 278
           P+H ++    LTSHL V+ RA CELSH IGIGIDR+EWKRWVMH D            S+
Sbjct: 829 PLHNLVPMPCLTSHLTVNVRACCELSHGIGIGIDREEWKRWVMHVDFRSAKGENDSTASH 888

[Close]
BLAST of CaUC05G091020 vs. ExPASy TrEMBL
Match: A0A7J9A098 (Uncharacterized protein (Fragment) OS=Gossypium laxum OX=34288 GN=Golax_004819 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.0e-14
Identity = 53/110 (48.18%), Postives = 63/110 (57.27%), Query Frame = 0 

Query: 172 IFNELGRTGMSSFRSFVYNT----------VSQFKNLWCQKISV---MNLGELGCTQSLL 231
           IF  L R+ MS+ R+    T           S    L  +++S     NLGELGC QS L
Sbjct: 376 IFGSLSRSVMSAARAPSLRTPPPMPRVRPPTSSAPRLQSRRLSFAPSRNLGELGCVQSFL 435

Query: 232 PMHGIMGATFLTSHLCVSARAFCELSHE-IGIGIDRKEWKRWVMHEDILS 268
           P+H ++    LTSHL VS RA CELSHE  GIGIDR+EWKRWV H D  S
Sbjct: 436 PLHNLVPMACLTSHLTVSVRACCELSHEGTGIGIDREEWKRWVKHVDFRS 485

[Close]
BLAST of CaUC05G091020 vs. ExPASy TrEMBL
Match: A0A0B0PFR0 (Caspase-6 OS=Gossypium arboreum OX=29729 GN=F383_28660 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 3.4e-14
Identity = 41/70 (58.57%), Postives = 48/70 (68.57%), Query Frame = 0 

Query: 207 NLGELGCTQSLLPMHGIMGATFLTSHLCVSARAFCELSHEIGIGIDRKEWKRWVMHEDIL 266
           NLGELGC QS LP+H ++    LTSHL V+ RA CELSH  GI I R+EWKRWVMH D  
Sbjct: 98  NLGELGCVQSFLPLHSMVPTACLTSHLTVNVRACCELSHGNGIEIYREEWKRWVMHVDFQ 157

Query: 267 SYESGRLSQH 277
           S +  R+  H
Sbjct: 158 SAKGERIGPH 167

[Close]
BLAST of CaUC05G091020 vs. TAIR 10
Match: AT2G15000.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34265.1); Has 70 Blast hits to 70 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.2 bits (139), Expect = 1.3e-08
Identity = 26/42 (61.90%), Postives = 33/42 (78.57%), Query Frame = 0 

Query: 207 NLGELGCTQSLLPMHGIMGATFLTSHLCVSARAFCELSHEIG 249
           NLG LGCTQS LP++ ++  + LTSHL V+ RAFCELS+ IG
Sbjct: 53  NLGALGCTQSFLPLYSVVATSQLTSHLNVNLRAFCELSNGIG 94

[Close]
BLAST of CaUC05G091020 vs. TAIR 10
Match: AT2G15000.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34265.1); Has 70 Blast hits to 70 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.2 bits (139), Expect = 1.3e-08
Identity = 26/42 (61.90%), Postives = 33/42 (78.57%), Query Frame = 0 

Query: 207 NLGELGCTQSLLPMHGIMGATFLTSHLCVSARAFCELSHEIG 249
           NLG LGCTQS LP++ ++  + LTSHL V+ RAFCELS+ IG
Sbjct: 53  NLGALGCTQSFLPLYSVVATSQLTSHLNVNLRAFCELSNGIG 94

[Close]
BLAST of CaUC05G091020 vs. TAIR 10
Match: AT4G34265.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G15000.3); Has 76 Blast hits to 76 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 57.8 bits (138), Expect = 1.6e-08
Identity = 26/42 (61.90%), Postives = 33/42 (78.57%), Query Frame = 0 

Query: 207 NLGELGCTQSLLPMHGIMGATFLTSHLCVSARAFCELSHEIG 249
           NLGELGCT+S LP++ ++ A  LTSHL V+ RAFCELS+  G
Sbjct: 50  NLGELGCTESFLPLYNVVAAARLTSHLNVNLRAFCELSNGNG 91

[Close]
BLAST of CaUC05G091020 vs. TAIR 10
Match: AT4G34265.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G15000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 57.0 bits (136), Expect = 2.8e-08
Identity = 25/39 (64.10%), Postives = 32/39 (82.05%), Query Frame = 0 

Query: 207 NLGELGCTQSLLPMHGIMGATFLTSHLCVSARAFCELSH 246
           NLGELGCT+S LP++ ++ A  LTSHL V+ RAFCELS+
Sbjct: 50  NLGELGCTESFLPLYNVVAAARLTSHLNVNLRAFCELSN 88

[Close]
BLAST of CaUC05G091020 vs. TAIR 10
Match: AT2G15000.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34265.2); Has 70 Blast hits to 70 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 54.7 bits (130), Expect = 1.4e-07
Identity = 24/39 (61.54%), Postives = 31/39 (79.49%), Query Frame = 0 

Query: 207 NLGELGCTQSLLPMHGIMGATFLTSHLCVSARAFCELSH 246
           NLG LGCTQS LP++ ++  + LTSHL V+ RAFCELS+
Sbjct: 53  NLGALGCTQSFLPLYSVVATSQLTSHLNVNLRAFCELSN 91

The following BLAST results are available for this feature:
BLAST of CaUC05G091020 vs. NCBI nr
Match NameE-valueIdentityDescription
PPD70527.12.6e-1672.13hypothetical protein GOBAR_DD32593 [Gossypium barbadense][more]
EOX98394.14.5e-1661.43Uncharacterized protein TCM_007167 [Theobroma cacao][more]
MBA0833556.15.8e-1649.54hypothetical protein [Gossypium armourianum][more]
PPS18108.11.3e-1544.19hypothetical protein GOBAR_AA02479 [Gossypium barbadense][more]
MBA0716969.14.2e-1448.18hypothetical protein [Gossypium laxum][more]
BLAST of CaUC05G091020 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CaUC05G091020 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A061E0282.2e-1661.43Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_007167 PE=4 SV=1[more]
A0A7J9JGM32.8e-1649.54Uncharacterized protein (Fragment) OS=Gossypium armourianum OX=34283 GN=Goarm_00... [more]
A0A2P5YRA66.3e-1644.19Glyco_hyd_65N_2 domain-containing protein OS=Gossypium barbadense OX=3634 GN=GOB... [more]
A0A7J9A0982.0e-1448.18Uncharacterized protein (Fragment) OS=Gossypium laxum OX=34288 GN=Golax_004819 P... [more]
A0A0B0PFR03.4e-1458.57Caspase-6 OS=Gossypium arboreum OX=29729 GN=F383_28660 PE=4 SV=1[more]
BLAST of CaUC05G091020 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G15000.21.3e-0861.90unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G15000.31.3e-0861.90unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G34265.11.6e-0861.90unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G34265.22.8e-0864.10unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G15000.11.4e-0761.54unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043459NFD6/NOXY2-likePANTHERPTHR33156OS02G0230000 PROTEINcoord: 206..247
NoneNo IPR availablePANTHERPTHR33156:SF26OS12G0592200 PROTEINcoord: 206..247

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC05G091020.1CaUC05G091020.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane