CaUC05G089430 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC05G089430
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Cyclic nucleotide gated channel
Location	Ciama_Chr05: 9879164 .. 9879613 (+)
RNA-Seq Expression	CaUC05G089430
Synteny	CaUC05G089430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGAAAAGATGGATGAACAATTGTTGGACGCGATGTGTGCTCGTCTCAAGCCAGTGCTGTACACACAAAGCTGCATTGTTTGGGAAGGCGATCCAGTTGATGAGATGCTCTTCATAATGAGGGGCAAGCTCTTAACCATGACTACAAATGGTGGGAGAACTGGATTCTTCAACTCTGATTTCCTCATGGCTGGTGATTTCTGTGGAGAAGAGCTATTGACTTGGGCTCTAGACCCTCATTCCTCAACCAATCTCCCTATTTCAACTCGAACTGCCCAATCTCTAACGAAAGTCGAAGCATTTGCTTTTGAATCCAACGACTTGAAATTTGTAGCCTCTCAATACCACAGACTTCACAGCAAGCAGGTACGTCAGATTTTCAGATTTTACTCACAGCAGTGGAGAACTTGGGCAGCTTGTTTTGTACAAGCAACATGGCGGTGGTGA

mRNA sequence

ATGTTTGAAAAGATGGATGAACAATTGTTGGACGCGATGTGTGCTCGTCTCAAGCCAGTGCTGTACACACAAAGCTGCATTGTTTGGGAAGGCGATCCAGTTGATGAGATGCTCTTCATAATGAGGGGCAAGCTCTTAACCATGACTACAAATGGTGGGAGAACTGGATTCTTCAACTCTGATTTCCTCATGGCTGGTGATTTCTGTGGAGAAGAGCTATTGACTTGGGCTCTAGACCCTCATTCCTCAACCAATCTCCCTATTTCAACTCGAACTGCCCAATCTCTAACGAAAGTCGAAGCATTTGCTTTTGAATCCAACGACTTGAAATTTGTAGCCTCTCAATACCACAGACTTCACAGCAAGCAGGTACGTCAGATTTTCAGATTTTACTCACAGCAGTGGAGAACTTGGGCAGCTTGTTTTGTACAAGCAACATGGCGGTGGTGA

Coding sequence (CDS)

ATGTTTGAAAAGATGGATGAACAATTGTTGGACGCGATGTGTGCTCGTCTCAAGCCAGTGCTGTACACACAAAGCTGCATTGTTTGGGAAGGCGATCCAGTTGATGAGATGCTCTTCATAATGAGGGGCAAGCTCTTAACCATGACTACAAATGGTGGGAGAACTGGATTCTTCAACTCTGATTTCCTCATGGCTGGTGATTTCTGTGGAGAAGAGCTATTGACTTGGGCTCTAGACCCTCATTCCTCAACCAATCTCCCTATTTCAACTCGAACTGCCCAATCTCTAACGAAAGTCGAAGCATTTGCTTTTGAATCCAACGACTTGAAATTTGTAGCCTCTCAATACCACAGACTTCACAGCAAGCAGGTACGTCAGATTTTCAGATTTTACTCACAGCAGTGGAGAACTTGGGCAGCTTGTTTTGTACAAGCAACATGGCGGTGGTGA

Protein sequence

MFEKMDEQLLDAMCARLKPVLYTQSCIVWEGDPVDEMLFIMRGKLLTMTTNGGRTGFFNSDFLMAGDFCGEELLTWALDPHSSTNLPISTRTAQSLTKVEAFAFESNDLKFVASQYHRLHSKQVRQIFRFYSQQWRTWAACFVQATWRW

Homology

[Close]

BLAST of CaUC05G089430 vs. NCBI nr
Match: XP_038891279.1 (LOW QUALITY PROTEIN: cyclic nucleotide-gated ion channel 1-like [Benincasa hispida])

HSP 1 Score: 287.0 bits (733), Expect = 9.6e-74
Identity = 140/150 (93.33%), Postives = 144/150 (96.00%), Query Frame = 0


Query: 1   MFEKMDEQLLDAMCARLKPVLYT-QSCIVWEGDPVDEMLFIMRGKLLTMTTNGGRTGFFN 60
           MFEKMD QLLDAMCA LKPVLYT +SCIV EGDPVDEMLFIMRGKLLTMTTNGGRTGFFN
Sbjct: 439 MFEKMDGQLLDAMCAHLKPVLYTEESCIVREGDPVDEMLFIMRGKLLTMTTNGGRTGFFN 498

Query: 61  SDFLMAGDFCGEELLTWALDPHSSTNLPISTRTAQSLTKVEAFAFESNDLKFVASQYHRL 120
           SDFLMAGDFCGEELLTWALDPHSSTNLPISTRTA+SLT+VEAFAFE NDLKFVASQY RL
Sbjct: 499 SDFLMAGDFCGEELLTWALDPHSSTNLPISTRTARSLTEVEAFAFEPNDLKFVASQYRRL 558

Query: 121 HSKQVRQIFRFYSQQWRTWAACFVQATWRW 150
           HSKQ+RQIFRFYSQQWRTWAACFVQATWRW
Sbjct: 559 HSKQLRQIFRFYSQQWRTWAACFVQATWRW 588

[Close]

BLAST of CaUC05G089430 vs. NCBI nr
Match: XP_031738557.1 (cyclic nucleotide-gated ion channel 1 isoform X2 [Cucumis sativus] >XP_031738558.1 cyclic nucleotide-gated ion channel 1 isoform X2 [Cucumis sativus] >XP_031738559.1 cyclic nucleotide-gated ion channel 1 isoform X2 [Cucumis sativus] >XP_031738560.1 cyclic nucleotide-gated ion channel 1 isoform X2 [Cucumis sativus] >KAE8650817.1 hypothetical protein Csa_017615 [Cucumis sativus])

HSP 1 Score: 283.5 bits (724), Expect = 1.1e-72
Identity = 136/150 (90.67%), Postives = 145/150 (96.67%), Query Frame = 0


Query: 1   MFEKMDEQLLDAMCARLKPVLYT-QSCIVWEGDPVDEMLFIMRGKLLTMTTNGGRTGFFN 60
           MFEKMDEQLLDAMCARLKPVLYT +SCIV EGDPVDEMLFIMRGKLLTMTTNGGRT FFN
Sbjct: 276 MFEKMDEQLLDAMCARLKPVLYTEESCIVREGDPVDEMLFIMRGKLLTMTTNGGRTIFFN 335

Query: 61  SDFLMAGDFCGEELLTWALDPHSSTNLPISTRTAQSLTKVEAFAFESNDLKFVASQYHRL 120
           SDFLM+GDFCGEELLTWALDPHSSTNLP+STRT +SLT+VEAF+FESNDLKFVASQY +L
Sbjct: 336 SDFLMSGDFCGEELLTWALDPHSSTNLPLSTRTVRSLTEVEAFSFESNDLKFVASQYRKL 395

Query: 121 HSKQVRQIFRFYSQQWRTWAACFVQATWRW 150
           HSKQ+RQIFRFYSQQWRTWAACF+QATWRW
Sbjct: 396 HSKQLRQIFRFYSQQWRTWAACFIQATWRW 425

[Close]

BLAST of CaUC05G089430 vs. NCBI nr
Match: XP_004150319.1 (cyclic nucleotide-gated ion channel 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 283.5 bits (724), Expect = 1.1e-72
Identity = 136/150 (90.67%), Postives = 145/150 (96.67%), Query Frame = 0


Query: 1   MFEKMDEQLLDAMCARLKPVLYT-QSCIVWEGDPVDEMLFIMRGKLLTMTTNGGRTGFFN 60
           MFEKMDEQLLDAMCARLKPVLYT +SCIV EGDPVDEMLFIMRGKLLTMTTNGGRT FFN
Sbjct: 419 MFEKMDEQLLDAMCARLKPVLYTEESCIVREGDPVDEMLFIMRGKLLTMTTNGGRTIFFN 478

Query: 61  SDFLMAGDFCGEELLTWALDPHSSTNLPISTRTAQSLTKVEAFAFESNDLKFVASQYHRL 120
           SDFLM+GDFCGEELLTWALDPHSSTNLP+STRT +SLT+VEAF+FESNDLKFVASQY +L
Sbjct: 479 SDFLMSGDFCGEELLTWALDPHSSTNLPLSTRTVRSLTEVEAFSFESNDLKFVASQYRKL 538

Query: 121 HSKQVRQIFRFYSQQWRTWAACFVQATWRW 150
           HSKQ+RQIFRFYSQQWRTWAACF+QATWRW
Sbjct: 539 HSKQLRQIFRFYSQQWRTWAACFIQATWRW 568

[Close]

BLAST of CaUC05G089430 vs. NCBI nr
Match: TYK31717.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 281.6 bits (719), Expect = 4.0e-72
Identity = 135/150 (90.00%), Postives = 144/150 (96.00%), Query Frame = 0


Query: 1    MFEKMDEQLLDAMCARLKPVLYT-QSCIVWEGDPVDEMLFIMRGKLLTMTTNGGRTGFFN 60
            MFEKMDEQLLDAMC RLKPVLYT +SCIV EGDPVDEMLFIMRGKLLTMTTNGGRT FFN
Sbjct: 1653 MFEKMDEQLLDAMCVRLKPVLYTEESCIVREGDPVDEMLFIMRGKLLTMTTNGGRTIFFN 1712

Query: 61   SDFLMAGDFCGEELLTWALDPHSSTNLPISTRTAQSLTKVEAFAFESNDLKFVASQYHRL 120
            SDFLMAGDFCGEELLTWALDPHSST+LPISTRT +SLT+VEAF+FESNDLKFVASQY +L
Sbjct: 1713 SDFLMAGDFCGEELLTWALDPHSSTSLPISTRTVRSLTEVEAFSFESNDLKFVASQYRKL 1772

Query: 121  HSKQVRQIFRFYSQQWRTWAACFVQATWRW 150
            HSKQ+RQ+FRFYSQQWRTWAACF+QATWRW
Sbjct: 1773 HSKQLRQVFRFYSQQWRTWAACFIQATWRW 1802

[Close]

BLAST of CaUC05G089430 vs. NCBI nr
Match: XP_008439333.1 (PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis melo] >XP_008439335.1 PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis melo] >XP_008439336.1 PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis melo] >XP_016898917.1 PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis melo] >KAA0050426.1 cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 280.0 bits (715), Expect = 1.2e-71
Identity = 134/150 (89.33%), Postives = 143/150 (95.33%), Query Frame = 0


Query: 1   MFEKMDEQLLDAMCARLKPVLYT-QSCIVWEGDPVDEMLFIMRGKLLTMTTNGGRTGFFN 60
           MFEKMDE+LLDAMC  LKPVLYT +SCIV EGDPVDEMLFIMRGKLLTMTTNGGRT FFN
Sbjct: 432 MFEKMDERLLDAMCVHLKPVLYTEESCIVREGDPVDEMLFIMRGKLLTMTTNGGRTIFFN 491

Query: 61  SDFLMAGDFCGEELLTWALDPHSSTNLPISTRTAQSLTKVEAFAFESNDLKFVASQYHRL 120
           SDFLMAGDFCGEELLTWALDPHSSTNLPISTRT +SLT+VEAF+FESNDLKFVASQY +L
Sbjct: 492 SDFLMAGDFCGEELLTWALDPHSSTNLPISTRTVRSLTEVEAFSFESNDLKFVASQYRKL 551

Query: 121 HSKQVRQIFRFYSQQWRTWAACFVQATWRW 150
           HSKQ+RQ+FRFYSQQWRTWAACF+QATWRW
Sbjct: 552 HSKQLRQVFRFYSQQWRTWAACFIQATWRW 581

[Close]

BLAST of CaUC05G089430 vs. ExPASy Swiss-Prot
Match: O65717 (Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana OX=3702 GN=CNGC1 PE=1 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 8.4e-65
Identity = 118/149 (79.19%), Postives = 136/149 (91.28%), Query Frame = 0


Query: 1   MFEKMDEQLLDAMCARLKPVLYT-QSCIVWEGDPVDEMLFIMRGKLLTMTTNGGRTGFFN 60
           MFEKMDEQLLDA+C RL+PVLYT +S IV EGDPVDEMLFIMRGKLLT+TTNGGRTGF N
Sbjct: 486 MFEKMDEQLLDALCDRLQPVLYTEESYIVREGDPVDEMLFIMRGKLLTITTNGGRTGFLN 545

Query: 61  SDFLMAGDFCGEELLTWALDPHSSTNLPISTRTAQSLTKVEAFAFESNDLKFVASQYHRL 120
           S++L AGDFCGEELLTWALDPHSS+NLPISTRT ++L +VEAFA +++DLKFVASQ+ RL
Sbjct: 546 SEYLGAGDFCGEELLTWALDPHSSSNLPISTRTVRALMEVEAFALKADDLKFVASQFRRL 605

Query: 121 HSKQVRQIFRFYSQQWRTWAACFVQATWR 149
           HSKQ+R  FR+YSQQW+TWAACF+QA WR
Sbjct: 606 HSKQLRHTFRYYSQQWKTWAACFIQAAWR 634

[Close]

BLAST of CaUC05G089430 vs. ExPASy Swiss-Prot
Match: Q9FXH6 (Putative cyclic nucleotide-gated ion channel 8 OS=Arabidopsis thaliana OX=3702 GN=CNGC8 PE=3 SV=2)

HSP 1 Score: 221.1 bits (562), Expect = 8.5e-57
Identity = 105/149 (70.47%), Postives = 127/149 (85.23%), Query Frame = 0


Query: 1   MFEKMDEQLLDAMCARLKPVLYTQSC-IVWEGDPVDEMLFIMRGKLLTMTTNGGRTGFFN 60
           +F  MDE+LLDA+C RLKP LYT+S  IV EGDPV+EMLFI+RG+L ++TT+GGR+GFFN
Sbjct: 508 LFANMDERLLDAICERLKPSLYTESTYIVREGDPVNEMLFIIRGRLESVTTDGGRSGFFN 567

Query: 61  SDFLMAGDFCGEELLTWALDPHSSTNLPISTRTAQSLTKVEAFAFESNDLKFVASQYHRL 120
              L  GDFCGEELLTWALDP + +NLP STRT ++LT+VEAFA E+ +LKFVASQ+ RL
Sbjct: 568 RGLLKEGDFCGEELLTWALDPKAGSNLPSSTRTVKALTEVEAFALEAEELKFVASQFRRL 627

Query: 121 HSKQVRQIFRFYSQQWRTWAACFVQATWR 149
           HS+QV+Q FRFYSQQWRTWAACF+QA WR
Sbjct: 628 HSRQVQQTFRFYSQQWRTWAACFIQAAWR 656

[Close]

BLAST of CaUC05G089430 vs. ExPASy Swiss-Prot
Match: Q9LD40 (Putative cyclic nucleotide-gated ion channel 13 OS=Arabidopsis thaliana OX=3702 GN=CNGC13 PE=3 SV=2)

HSP 1 Score: 217.6 bits (553), Expect = 9.4e-56
Identity = 103/149 (69.13%), Postives = 125/149 (83.89%), Query Frame = 0


Query: 1   MFEKMDEQLLDAMCARLKPVLYTQ-SCIVWEGDPVDEMLFIMRGKLLTMTTNGGRTGFFN 60
           +FE MDEQLLDA+C +LKPVLYT+ S  + EGDPV+EMLF+MRGKL++ TTNGGRTGFFN
Sbjct: 474 LFEIMDEQLLDAVCDKLKPVLYTENSYAIREGDPVEEMLFVMRGKLMSATTNGGRTGFFN 533

Query: 61  SDFLMAGDFCGEELLTWALDPHSSTNLPISTRTAQSLTKVEAFAFESNDLKFVASQYHRL 120
           + +L   DFCGE+LLTWALDP SS++ PISTRT Q+LT+VEAFA  ++DLK VASQ+ RL
Sbjct: 534 AVYLKPSDFCGEDLLTWALDPQSSSHFPISTRTVQALTEVEAFALAADDLKLVASQFRRL 593

Query: 121 HSKQVRQIFRFYSQQWRTWAACFVQATWR 149
           HSKQ++  FRFYS QWRTW A F+QA WR
Sbjct: 594 HSKQLQHTFRFYSVQWRTWGASFIQAAWR 622

[Close]

BLAST of CaUC05G089430 vs. ExPASy Swiss-Prot
Match: Q9S9N5 (Putative cyclic nucleotide-gated ion channel 7 OS=Arabidopsis thaliana OX=3702 GN=CNGC7 PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 9.4e-56
Identity = 102/149 (68.46%), Postives = 127/149 (85.23%), Query Frame = 0


Query: 1   MFEKMDEQLLDAMCARLKPVLYTQSC-IVWEGDPVDEMLFIMRGKLLTMTTNGGRTGFFN 60
           +F  MDE+LLDA+C RLKP L+T+S  IV EGDPV+EM+FI+RG+L ++TT+GGR+GFFN
Sbjct: 502 LFANMDERLLDAICERLKPSLFTESTYIVREGDPVNEMMFIIRGRLESVTTDGGRSGFFN 561

Query: 61  SDFLMAGDFCGEELLTWALDPHSSTNLPISTRTAQSLTKVEAFAFESNDLKFVASQYHRL 120
              L  GDFCGEELLTWALDP + +NLP STRT ++LT+VEAFA E+ +LKFVASQ+ RL
Sbjct: 562 RGLLKEGDFCGEELLTWALDPKAGSNLPSSTRTVKALTEVEAFALEAEELKFVASQFRRL 621

Query: 121 HSKQVRQIFRFYSQQWRTWAACFVQATWR 149
           HS+QV+Q FRFYSQQWRTWA+CF+QA WR
Sbjct: 622 HSRQVQQTFRFYSQQWRTWASCFIQAAWR 650

[Close]

BLAST of CaUC05G089430 vs. ExPASy Swiss-Prot
Match: Q9M0A4 (Putative cyclic nucleotide-gated ion channel 9 OS=Arabidopsis thaliana OX=3702 GN=CNGC9 PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 9.4e-56
Identity = 104/149 (69.80%), Postives = 127/149 (85.23%), Query Frame = 0


Query: 1   MFEKMDEQLLDAMCARLKPVLYTQSC-IVWEGDPVDEMLFIMRGKLLTMTTNGGRTGFFN 60
           +FE MDE+LLDA+C RLKP LYT+S  +V EGDPV+EMLFI+RG+L ++TT+GGR+GFFN
Sbjct: 513 LFENMDERLLDAICERLKPCLYTESSYLVREGDPVNEMLFIIRGRLESVTTDGGRSGFFN 572

Query: 61  SDFLMAGDFCGEELLTWALDPHSSTNLPISTRTAQSLTKVEAFAFESNDLKFVASQYHRL 120
              L  GDFCGEELLTWALDP S +NLP STRTA++LT+VEAFA  +++LKFVASQ+ RL
Sbjct: 573 RSLLKEGDFCGEELLTWALDPKSGSNLPSSTRTAKALTEVEAFALIADELKFVASQFRRL 632

Query: 121 HSKQVRQIFRFYSQQWRTWAACFVQATWR 149
           HS+QV+  FRFYSQQWRTWAA F+QA WR
Sbjct: 633 HSRQVQHTFRFYSQQWRTWAAIFIQAAWR 661

[Close]

BLAST of CaUC05G089430 vs. ExPASy TrEMBL
Match: A0A5D3E6F8 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold788G00190 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.9e-72
Identity = 135/150 (90.00%), Postives = 144/150 (96.00%), Query Frame = 0


Query: 1    MFEKMDEQLLDAMCARLKPVLYT-QSCIVWEGDPVDEMLFIMRGKLLTMTTNGGRTGFFN 60
            MFEKMDEQLLDAMC RLKPVLYT +SCIV EGDPVDEMLFIMRGKLLTMTTNGGRT FFN
Sbjct: 1653 MFEKMDEQLLDAMCVRLKPVLYTEESCIVREGDPVDEMLFIMRGKLLTMTTNGGRTIFFN 1712

Query: 61   SDFLMAGDFCGEELLTWALDPHSSTNLPISTRTAQSLTKVEAFAFESNDLKFVASQYHRL 120
            SDFLMAGDFCGEELLTWALDPHSST+LPISTRT +SLT+VEAF+FESNDLKFVASQY +L
Sbjct: 1713 SDFLMAGDFCGEELLTWALDPHSSTSLPISTRTVRSLTEVEAFSFESNDLKFVASQYRKL 1772

Query: 121  HSKQVRQIFRFYSQQWRTWAACFVQATWRW 150
            HSKQ+RQ+FRFYSQQWRTWAACF+QATWRW
Sbjct: 1773 HSKQLRQVFRFYSQQWRTWAACFIQATWRW 1802

[Close]

BLAST of CaUC05G089430 vs. ExPASy TrEMBL
Match: A0A1S3AZ77 (cyclic nucleotide-gated ion channel 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484155 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 5.7e-72
Identity = 134/150 (89.33%), Postives = 143/150 (95.33%), Query Frame = 0


Query: 1   MFEKMDEQLLDAMCARLKPVLYT-QSCIVWEGDPVDEMLFIMRGKLLTMTTNGGRTGFFN 60
           MFEKMDE+LLDAMC  LKPVLYT +SCIV EGDPVDEMLFIMRGKLLTMTTNGGRT FFN
Sbjct: 432 MFEKMDERLLDAMCVHLKPVLYTEESCIVREGDPVDEMLFIMRGKLLTMTTNGGRTIFFN 491

Query: 61  SDFLMAGDFCGEELLTWALDPHSSTNLPISTRTAQSLTKVEAFAFESNDLKFVASQYHRL 120
           SDFLMAGDFCGEELLTWALDPHSSTNLPISTRT +SLT+VEAF+FESNDLKFVASQY +L
Sbjct: 492 SDFLMAGDFCGEELLTWALDPHSSTNLPISTRTVRSLTEVEAFSFESNDLKFVASQYRKL 551

Query: 121 HSKQVRQIFRFYSQQWRTWAACFVQATWRW 150
           HSKQ+RQ+FRFYSQQWRTWAACF+QATWRW
Sbjct: 552 HSKQLRQVFRFYSQQWRTWAACFIQATWRW 581

[Close]

BLAST of CaUC05G089430 vs. ExPASy TrEMBL
Match: A0A5A7U8B4 (Cyclic nucleotide-gated ion channel 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00140 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 5.7e-72
Identity = 134/150 (89.33%), Postives = 143/150 (95.33%), Query Frame = 0


Query: 1   MFEKMDEQLLDAMCARLKPVLYT-QSCIVWEGDPVDEMLFIMRGKLLTMTTNGGRTGFFN 60
           MFEKMDE+LLDAMC  LKPVLYT +SCIV EGDPVDEMLFIMRGKLLTMTTNGGRT FFN
Sbjct: 432 MFEKMDERLLDAMCVHLKPVLYTEESCIVREGDPVDEMLFIMRGKLLTMTTNGGRTIFFN 491

Query: 61  SDFLMAGDFCGEELLTWALDPHSSTNLPISTRTAQSLTKVEAFAFESNDLKFVASQYHRL 120
           SDFLMAGDFCGEELLTWALDPHSSTNLPISTRT +SLT+VEAF+FESNDLKFVASQY +L
Sbjct: 492 SDFLMAGDFCGEELLTWALDPHSSTNLPISTRTVRSLTEVEAFSFESNDLKFVASQYRKL 551

Query: 121 HSKQVRQIFRFYSQQWRTWAACFVQATWRW 150
           HSKQ+RQ+FRFYSQQWRTWAACF+QATWRW
Sbjct: 552 HSKQLRQVFRFYSQQWRTWAACFIQATWRW 581

[Close]

BLAST of CaUC05G089430 vs. ExPASy TrEMBL
Match: A0A1S3AZ79 (cyclic nucleotide-gated ion channel 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484155 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 5.7e-72
Identity = 134/150 (89.33%), Postives = 143/150 (95.33%), Query Frame = 0


Query: 1   MFEKMDEQLLDAMCARLKPVLYT-QSCIVWEGDPVDEMLFIMRGKLLTMTTNGGRTGFFN 60
           MFEKMDE+LLDAMC  LKPVLYT +SCIV EGDPVDEMLFIMRGKLLTMTTNGGRT FFN
Sbjct: 409 MFEKMDERLLDAMCVHLKPVLYTEESCIVREGDPVDEMLFIMRGKLLTMTTNGGRTIFFN 468

Query: 61  SDFLMAGDFCGEELLTWALDPHSSTNLPISTRTAQSLTKVEAFAFESNDLKFVASQYHRL 120
           SDFLMAGDFCGEELLTWALDPHSSTNLPISTRT +SLT+VEAF+FESNDLKFVASQY +L
Sbjct: 469 SDFLMAGDFCGEELLTWALDPHSSTNLPISTRTVRSLTEVEAFSFESNDLKFVASQYRKL 528

Query: 121 HSKQVRQIFRFYSQQWRTWAACFVQATWRW 150
           HSKQ+RQ+FRFYSQQWRTWAACF+QATWRW
Sbjct: 529 HSKQLRQVFRFYSQQWRTWAACFIQATWRW 558

[Close]

BLAST of CaUC05G089430 vs. ExPASy TrEMBL
Match: A0A1S3AZ82 (cyclic nucleotide-gated ion channel 1-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103484155 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 5.7e-72
Identity = 134/150 (89.33%), Postives = 143/150 (95.33%), Query Frame = 0


Query: 1   MFEKMDEQLLDAMCARLKPVLYT-QSCIVWEGDPVDEMLFIMRGKLLTMTTNGGRTGFFN 60
           MFEKMDE+LLDAMC  LKPVLYT +SCIV EGDPVDEMLFIMRGKLLTMTTNGGRT FFN
Sbjct: 378 MFEKMDERLLDAMCVHLKPVLYTEESCIVREGDPVDEMLFIMRGKLLTMTTNGGRTIFFN 437

Query: 61  SDFLMAGDFCGEELLTWALDPHSSTNLPISTRTAQSLTKVEAFAFESNDLKFVASQYHRL 120
           SDFLMAGDFCGEELLTWALDPHSSTNLPISTRT +SLT+VEAF+FESNDLKFVASQY +L
Sbjct: 438 SDFLMAGDFCGEELLTWALDPHSSTNLPISTRTVRSLTEVEAFSFESNDLKFVASQYRKL 497

Query: 121 HSKQVRQIFRFYSQQWRTWAACFVQATWRW 150
           HSKQ+RQ+FRFYSQQWRTWAACF+QATWRW
Sbjct: 498 HSKQLRQVFRFYSQQWRTWAACFIQATWRW 527

[Close]

BLAST of CaUC05G089430 vs. TAIR 10
Match: AT5G53130.1 (cyclic nucleotide gated channel 1 )

HSP 1 Score: 247.7 bits (631), Expect = 6.0e-66
Identity = 118/149 (79.19%), Postives = 136/149 (91.28%), Query Frame = 0


Query: 1   MFEKMDEQLLDAMCARLKPVLYT-QSCIVWEGDPVDEMLFIMRGKLLTMTTNGGRTGFFN 60
           MFEKMDEQLLDA+C RL+PVLYT +S IV EGDPVDEMLFIMRGKLLT+TTNGGRTGF N
Sbjct: 486 MFEKMDEQLLDALCDRLQPVLYTEESYIVREGDPVDEMLFIMRGKLLTITTNGGRTGFLN 545

Query: 61  SDFLMAGDFCGEELLTWALDPHSSTNLPISTRTAQSLTKVEAFAFESNDLKFVASQYHRL 120
           S++L AGDFCGEELLTWALDPHSS+NLPISTRT ++L +VEAFA +++DLKFVASQ+ RL
Sbjct: 546 SEYLGAGDFCGEELLTWALDPHSSSNLPISTRTVRALMEVEAFALKADDLKFVASQFRRL 605

Query: 121 HSKQVRQIFRFYSQQWRTWAACFVQATWR 149
           HSKQ+R  FR+YSQQW+TWAACF+QA WR
Sbjct: 606 HSKQLRHTFRYYSQQWKTWAACFIQAAWR 634

[Close]

BLAST of CaUC05G089430 vs. TAIR 10
Match: AT1G19780.1 (cyclic nucleotide gated channel 8 )

HSP 1 Score: 221.1 bits (562), Expect = 6.0e-58
Identity = 105/149 (70.47%), Postives = 127/149 (85.23%), Query Frame = 0


Query: 1   MFEKMDEQLLDAMCARLKPVLYTQSC-IVWEGDPVDEMLFIMRGKLLTMTTNGGRTGFFN 60
           +F  MDE+LLDA+C RLKP LYT+S  IV EGDPV+EMLFI+RG+L ++TT+GGR+GFFN
Sbjct: 508 LFANMDERLLDAICERLKPSLYTESTYIVREGDPVNEMLFIIRGRLESVTTDGGRSGFFN 567

Query: 61  SDFLMAGDFCGEELLTWALDPHSSTNLPISTRTAQSLTKVEAFAFESNDLKFVASQYHRL 120
              L  GDFCGEELLTWALDP + +NLP STRT ++LT+VEAFA E+ +LKFVASQ+ RL
Sbjct: 568 RGLLKEGDFCGEELLTWALDPKAGSNLPSSTRTVKALTEVEAFALEAEELKFVASQFRRL 627

Query: 121 HSKQVRQIFRFYSQQWRTWAACFVQATWR 149
           HS+QV+Q FRFYSQQWRTWAACF+QA WR
Sbjct: 628 HSRQVQQTFRFYSQQWRTWAACFIQAAWR 656

[Close]

BLAST of CaUC05G089430 vs. TAIR 10
Match: AT1G15990.1 (cyclic nucleotide gated channel 7 )

HSP 1 Score: 217.6 bits (553), Expect = 6.6e-57
Identity = 102/149 (68.46%), Postives = 127/149 (85.23%), Query Frame = 0


Query: 1   MFEKMDEQLLDAMCARLKPVLYTQSC-IVWEGDPVDEMLFIMRGKLLTMTTNGGRTGFFN 60
           +F  MDE+LLDA+C RLKP L+T+S  IV EGDPV+EM+FI+RG+L ++TT+GGR+GFFN
Sbjct: 473 LFANMDERLLDAICERLKPSLFTESTYIVREGDPVNEMMFIIRGRLESVTTDGGRSGFFN 532

Query: 61  SDFLMAGDFCGEELLTWALDPHSSTNLPISTRTAQSLTKVEAFAFESNDLKFVASQYHRL 120
              L  GDFCGEELLTWALDP + +NLP STRT ++LT+VEAFA E+ +LKFVASQ+ RL
Sbjct: 533 RGLLKEGDFCGEELLTWALDPKAGSNLPSSTRTVKALTEVEAFALEAEELKFVASQFRRL 592

Query: 121 HSKQVRQIFRFYSQQWRTWAACFVQATWR 149
           HS+QV+Q FRFYSQQWRTWA+CF+QA WR
Sbjct: 593 HSRQVQQTFRFYSQQWRTWASCFIQAAWR 621

[Close]

BLAST of CaUC05G089430 vs. TAIR 10
Match: AT4G30560.1 (cyclic nucleotide gated channel 9 )

HSP 1 Score: 217.6 bits (553), Expect = 6.6e-57
Identity = 104/149 (69.80%), Postives = 127/149 (85.23%), Query Frame = 0


Query: 1   MFEKMDEQLLDAMCARLKPVLYTQSC-IVWEGDPVDEMLFIMRGKLLTMTTNGGRTGFFN 60
           +FE MDE+LLDA+C RLKP LYT+S  +V EGDPV+EMLFI+RG+L ++TT+GGR+GFFN
Sbjct: 513 LFENMDERLLDAICERLKPCLYTESSYLVREGDPVNEMLFIIRGRLESVTTDGGRSGFFN 572

Query: 61  SDFLMAGDFCGEELLTWALDPHSSTNLPISTRTAQSLTKVEAFAFESNDLKFVASQYHRL 120
              L  GDFCGEELLTWALDP S +NLP STRTA++LT+VEAFA  +++LKFVASQ+ RL
Sbjct: 573 RSLLKEGDFCGEELLTWALDPKSGSNLPSSTRTAKALTEVEAFALIADELKFVASQFRRL 632

Query: 121 HSKQVRQIFRFYSQQWRTWAACFVQATWR 149
           HS+QV+  FRFYSQQWRTWAA F+QA WR
Sbjct: 633 HSRQVQHTFRFYSQQWRTWAAIFIQAAWR 661

[Close]

BLAST of CaUC05G089430 vs. TAIR 10
Match: AT4G01010.1 (cyclic nucleotide-gated channel 13 )

HSP 1 Score: 217.6 bits (553), Expect = 6.6e-57
Identity = 103/149 (69.13%), Postives = 125/149 (83.89%), Query Frame = 0


Query: 1   MFEKMDEQLLDAMCARLKPVLYTQ-SCIVWEGDPVDEMLFIMRGKLLTMTTNGGRTGFFN 60
           +FE MDEQLLDA+C +LKPVLYT+ S  + EGDPV+EMLF+MRGKL++ TTNGGRTGFFN
Sbjct: 474 LFEIMDEQLLDAVCDKLKPVLYTENSYAIREGDPVEEMLFVMRGKLMSATTNGGRTGFFN 533

Query: 61  SDFLMAGDFCGEELLTWALDPHSSTNLPISTRTAQSLTKVEAFAFESNDLKFVASQYHRL 120
           + +L   DFCGE+LLTWALDP SS++ PISTRT Q+LT+VEAFA  ++DLK VASQ+ RL
Sbjct: 534 AVYLKPSDFCGEDLLTWALDPQSSSHFPISTRTVQALTEVEAFALAADDLKLVASQFRRL 593

Query: 121 HSKQVRQIFRFYSQQWRTWAACFVQATWR 149
           HSKQ++  FRFYS QWRTW A F+QA WR
Sbjct: 594 HSKQLQHTFRFYSVQWRTWGASFIQAAWR 622

The following BLAST results are available for this feature:

BLAST of CaUC05G089430 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891279.1	9.6e-74	93.33	LOW QUALITY PROTEIN: cyclic nucleotide-gated ion channel 1-like [Benincasa hispi...	[more]
XP_031738557.1	1.1e-72	90.67	cyclic nucleotide-gated ion channel 1 isoform X2 [Cucumis sativus] >XP_031738558...	[more]
XP_004150319.1	1.1e-72	90.67	cyclic nucleotide-gated ion channel 1 isoform X1 [Cucumis sativus]	[more]
TYK31717.1	4.0e-72	90.00	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
XP_008439333.1	1.2e-71	89.33	PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis melo] ...	[more]

BLAST of CaUC05G089430 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65717	8.4e-65	79.19	Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana OX=3702 GN=CNGC1 P...	[more]
Q9FXH6	8.5e-57	70.47	Putative cyclic nucleotide-gated ion channel 8 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9LD40	9.4e-56	69.13	Putative cyclic nucleotide-gated ion channel 13 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9S9N5	9.4e-56	68.46	Putative cyclic nucleotide-gated ion channel 7 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9M0A4	9.4e-56	69.80	Putative cyclic nucleotide-gated ion channel 9 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of CaUC05G089430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E6F8	1.9e-72	90.00	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold788G0...	[more]
A0A1S3AZ77	5.7e-72	89.33	cyclic nucleotide-gated ion channel 1-like isoform X1 OS=Cucumis melo OX=3656 GN...	[more]
A0A5A7U8B4	5.7e-72	89.33	Cyclic nucleotide-gated ion channel 1-like isoform X1 OS=Cucumis melo var. makuw...	[more]
A0A1S3AZ79	5.7e-72	89.33	cyclic nucleotide-gated ion channel 1-like isoform X2 OS=Cucumis melo OX=3656 GN...	[more]
A0A1S3AZ82	5.7e-72	89.33	cyclic nucleotide-gated ion channel 1-like isoform X3 OS=Cucumis melo OX=3656 GN...	[more]

BLAST of CaUC05G089430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53130.1	6.0e-66	79.19	cyclic nucleotide gated channel 1	[more]
AT1G19780.1	6.0e-58	70.47	cyclic nucleotide gated channel 8	[more]
AT1G15990.1	6.6e-57	68.46	cyclic nucleotide gated channel 7	[more]
AT4G30560.1	6.6e-57	69.80	cyclic nucleotide gated channel 9	[more]
AT4G01010.1	6.6e-57	69.13	cyclic nucleotide-gated channel 13	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000595	Cyclic nucleotide-binding domain	SMART	SM00100	cnmp_10	coord: 1..131 e-value: 2.6E-9 score: 46.9
IPR000595	Cyclic nucleotide-binding domain	PFAM	PF00027	cNMP_binding	coord: 25..115 e-value: 1.2E-6 score: 28.5
IPR000595	Cyclic nucleotide-binding domain	PROSITE	PS50042	CNMP_BINDING_3	coord: 1..84 score: 8.3522
IPR000595	Cyclic nucleotide-binding domain	CDD	cd00038	CAP_ED	coord: 1..116 e-value: 6.55898E-16 score: 67.351
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 1..118 e-value: 7.0E-37 score: 127.9
None	No IPR available	PANTHER	PTHR45651	CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED	coord: 1..148
None	No IPR available	PANTHER	PTHR45651:SF91	CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN	coord: 1..148
IPR018490	Cyclic nucleotide-binding-like	SUPERFAMILY	51206	cAMP-binding domain-like	coord: 1..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC05G089430.1	CaUC05G089430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0034220	ion transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005216	ion channel activity
molecular_function	GO:0003676	nucleic acid binding