CaUC05G088360 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC05G088360
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1
Location	Ciama_Chr05: 8837066 .. 8843222 (-)
RNA-Seq Expression	CaUC05G088360
Synteny	CaUC05G088360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGTTGAACTCTCCCCGACCCGATGACACTTTTGTGTCCAACAAGTTAAAACTAATAATATCTCTTCCTGTCATTTTAACTTCTCTAAGAAATATATAATGTATTAATGGTCCCTTAAACATTATATTCATATTTAATAAAGGTCCAAAACAAGTCTACCTAAACATTGCAGGTTGGGTAGGGGTTAATTTATTTTTAATATTCGTTTTGTGCTTCCCGTAGATGTGAGGAACATGTAAGGGTAGTTGAAGAATGATCATCAGAGTGGATTTTTGTTTTCAATTCCATTACACCTACATTATTTGATGTAAATCATACGTTAATAAACACAAAGGGAATGAATAATATATATTATATATATACATTTTTTTTTTTTTAAGAAAAAAACAAATAACAAAATCCCGAAAATACCCGGGCAGGGTTGGGATCGAGTCAAAAAATAGTGAAAAATTATCCCCCCAGTTTACTGTACCCGGTCAATACCCGACGAAGGCAAATACCAGACGTCCGGTACCACCATGCCCAAAAATGGACCCCATTCTTTATGCCCGATCAACCCAGCCAGGGCAAGATCCGGGGCAAGCCCTACCTCCCCAGGTGCCATTCCCAAAAACCCACCCCCATTCCTTTGCGCCTAGACCATTCCTGCCTAAGGCAAGACCCTTCCCCGATGCCATACCCTTAGTCCATACCTTGCCAGGGCAAGACCCGAGGCAAACTCTACTCAATGCTATGCCAAATACCAACCCCCAGTCCTTTGTGCCCGGTCCATACTCAGCAAGGGCATGCACCAGGGCAAATATCAGAAACCTGGGGCAAACATACCCACCCCAATCTTCTTTACCTGGTTTCCCTAATATGAAGTCCAACTGGGTACATTCGAAATGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAGGAAAACACACACGATTTGTTCTCTCTACACACTAGTTTTTCAATCCAAATCAGTTAGAAAGTGCCGAAAACCAACCATATGCTCTAAAATTGGTTTAAAAGTCAAGACATTTCAGGTAAAAATGAAGAAACATATCTACCATGACATTTAGACCAAAATGCAGAAACATGGGTTTAACATGTTTTCCTCGATCTTCTTCAGTTGGAAAACCTTAAACGAGCATAGAAGAGAAGGTTGTACCTATGCCTAGAAACACTAAACAAACAGCATGCTCAAACATTGATTTTGGCCAAAGAAAAAAAAGAACCCAAAAATCCTAAAAAATGGGAAAAACAAGGATAAAAAGGGACTTAATGGTTGGGACGAGGGATTGATGAAATCCAACCGAATCGAAGGGAAAAAATCGCAAGGGAGAGGGAGGTTTCAACGGGTGGGAAGAGAGAGAAAAGACGGAGAAAAACTTCTGAAATTATCAGAAGGGCAATATCGTAATTCTATTTTTGTTTCAACTAAAGTAAAGTGATCCTAAAAAACTTGTTTTTTGAAAAAAAGAAAAAAGGGGCTATTTTTAAAAGAGGGTCCAAAAATGTCAATTTCCCAACGATGCTTCTATTTATTCTTTTTCGAATTAGTCCGGTGCTGTTTTACCTTGGATACCTTCACAGTTGAACTTGGTTCTTACTCTTATGATTTTATCTCCTTTTTTCTTTCTTTAATAAACATAAAATTAAATTGCAATTTGATTGTACATATACTAAGAAAATTGCAATCTGATTATAATTATTCATCCAACTCAAAGTGAATTGTTTACGTAATGCCGTAGAAAAGTTCATCGAAATTGAACGGATTTGGATGAGGATCGAACGGAGAAGTGTCCGGCCGGCCCTTTGACATTCACTAGAATTCGGAGAAGTTTCTAACAAGGAAACATCATGATCAGCTCAATTCCCTCTCCCAGCCCGTTGAATCGGTTGACGTTCGCTCTCCAATTTCGCGCTAAAAGTAATACGAAGGCTCCAGCATTTTCTGCTCGTCTTGACGATTCTAAGAACTCAGCTAATCAGCAACTCAATCTCTCTGTCCTTCGGTTCACACTCGGTATCTCTCTCTCTCTCTGGAAATTGGTACTTTCTAAAGGAATTGACAATTTGGGGATTTGGGAACAAGTGATTTTTTTCAGTGTAACATTTCGTCGTAATATGGGGTGTAGGGATTCCTGGGTTGGATGAGTCTTACTTACCCAGATGGATTGGCTATGGATTTGGTTCACTTCTTCTATTGAATCACTTTGTTGGTTCGAATTCAGCTGCTCTCACCACCCCAGCACAGTCAGTAAGCAAACACAATTTTCTGGGAACGCCTTTGTTTTGTTATTCTTGTTGGATTGTCATTTTTTATCCTGTTTGAAGTGGTTTTGTTATTTGTAGAGAACTGAGGCTTTAGGCATTTCCTTGGCAGCATTTTCTATTGCACTCCCTTACTTGGGAAAGTTTCTTAAGGTAACATATTAGATATTACATTGCTGTCTTGCGTATATACTTCTTCTTTCATCTTCTTTTTCTACTTACTAGAAAACTTCCGCCAACCTCTGTAAGAGTGGAGAAAAAAGGAGCCAAAAAAGGGAGAGAACTAGAGGAACTTGAAACTGCTGGTCTGTGTAGTCCTTAGCACTGCTACAGTCCCATTGTCTGCCGTCGGTCAAGTAGGTATTTATGATGGAAAGTTAGTACTCTGAAGAAGAGACTGGGAGTCTGGGACGGGGAGTAATATATTTGATGGAAATTTGTTAAACGAGAGAGACTTTTCTGATGGCTGAAGAACCTACCATTGATGGAATGCTTAGGTATCAAAGTTTCCTGATTTTGTATTGTGTAGAACTTTAAATGGGGGAGTGGTAGATTGAGATGAATTATATGTGGCAGGATTTGTGAACTTAGGATGATGTCTTACTAGACATTTGGGTTGGGTGGACGGCTGTTGTTAACCCTGTTTAAGCTCGAAGATGTTGAATACCTATTTAGCCAAATTCTTCTCAAATTCTATCTAGCCAAGTACAACAGGAGGGAGGGAGTTTCAAACCATAGATCTCTTGGTCACTAACCAATCCGTATGCTAGGATTGAATAGGGTTGTAATTCATTACCCCGATAAGTTTCTGGACATCCCAGTCTTCTTATGATTCTACATGTAGAGTTCATCTTGGAATCTTCTGTCTTGCTTAAATTTCTTCTCTAACATCCTTTTCTTTTTACATCAATTTGGCTCAAATATCACCTCAGATCTCTACGTCTAGCCTTTTCATCTCTGAGCCTAGGACCATACATCAAAAAGGAGTCTCACATCCTTACATTATCCTCATTAAGGTTGCGGGCACATGACCTATTTTATTGAATAAGTTCTTCTCATTTCGTTGATGAGGTCATTGTCTGGTTTTTGGTCTACATTCTAGCATTGTAGCATTCCAGGAGTTGCTGACCTGAGTATTAGATTAACTTCACCAAGACATGAAATAGATGTCTGGTTGAAGCATTGAGACTTTTTCTCCCTCACAGTAGCTATAGTTCCTGTATTTGATTTTTGACTGCTTTAGATTCCAAATTGTCAATTCAATTAAATAGTGATCAATAAATATCAAATCTTATTCACTTTATACTTGCTTGGCCACTGATTACTACTTAATGAGGAAAAGTACCCAATCTTTGCCTGCACCGAGGCATGAAATAAAGTATTAAACTTCACCAAGGTATGAATTAGGTGTCTAGTTGAAGCATTGAGACTTTTTGTCCCTCACAGTAGCTAGAGTCCTGTGTTTGAGTTTTGATTGATTGCTTTAGATTCCAAATGCCAATTCAATTAAATACTTATCAATAAATATCAAATCTTATTCACTTTGTACTTGCTTGGCTGCTGCTTTCTGCTTAATAAGGAAAAGTACCCATCTTTGCCTGCAGGGTGCAGTTCCATCTGGCGAAGCTACCCTCCCTGAAGGCACTGAGCAAATATTTCTCTTGTCACAAATTGTATTGGATGATGTGAAGGAAGACTTGGCTTGGGCAACATACATCTTGCTGCGCAATACAAACAGTATATCAGTGGTATCTCTCAGATTTTTGTCACTCACATACATTTTACTTCACAAATATGTAGTAAGAGAACACGGTGTATTCAACAAACTACATTATTTAGCTTTCCTTGATACCGTCTAAGTTTTAATTTTTGAATAATTTCTTATCTTTGGATTCAGTTAATACAGACTCAAGGGGCATTACAACAGACTAGATTATTTAGCTTTCCTTGATACCGTCTAAGTTTTAATTTTTGAATCATTTCTTATCTTTGGATTCAGTTAATACAGACTCAAGGGGCATTATGTGTTCGAGGATACTGGAATAGTCCAAATGATAAATCAGGAGCAGATTTACTTGCCTGGTTTGAGGAGCAGCTTCAGAGCATCGGCTTATCTGCATTAAAGGATGCCCTCTATTTCCCTCAGATTTCAGGTATAGAATTGTGTTTTTTATCATGCTTTCATGAGTGTATTTTTTGCTCTCCTGGTGCACATGAAACATGTCTTAGAAACGATCATATTTGCGGGGGAAATGTTGTTTCTCCTTAAAAATCGCTTATGCTGACATAGAATAGGTTGAAGATAAACAGTTGTAAGTTGTAGCTTTGAATTTTTTATGTTATATTTGAAGTTAAAATGATTGGCCACTGGTAGTTCATGTGCACTAGAGAACCTTTGGCCACTGGTAGTTCATGTGCACTAGAGAACCTTTGGCCACTGGTAGTTCATGTGCACTAGAGAACATAAAGGGGGAAGGGCTTAGAACATTGGAATAAGTAGTTAGTCAGGTAGGCTCACTATTGTGACTTGCTAATGTGATATTAGGAGAGAAGATAAGTCGTGATTGAGATAGGAGATAACAGTCGTGGGCATCTATTGGAGCTTCTACTCTCTAATGGCATTTTGGATTATCAACCACTATCAAAATTTGAAGTAATCTGCAATGTTATATTGATTTCTTTTCCTTACGGTGATGAGGTGTAACTCCTGGGTTTTTCTGACTAAACATACACTGATAGTAGAAGTTGAGAGAGTATGACAAACTACACAGCTAGTAAAAGTTAAACAAATGCTATGATGCTTTATGAAACTTTTCAAGGTTTTCATAACTTTTTCCCAGAATCTGGACTGTGGCAAATGCTGCCTGAGGGCACTCGCTCGGTTTTGGTACAACCGGTTGTTCAAAATCTAAAGCAAAGTGGCAATGAGATGGAAAAGATGGGAGGATTCATACTGCTGGCCTCAAGTTTAAGTTATGCATTTAGCGATAAAGATAGAGCCTGGATAAGAGCTCTTGCTAGCAAGTTTGGTGACAGGGCCATCCTCTGA

mRNA sequence

ATGAGAAAAAAACAAATAACAAAATCCCGAAAATACCCGGGCAGGGTTGGGATCGAGTCAAAAAATAGTGAAAAATTATCCCCCCAGTTTACTGTACCCGGTCAATACCCGACGAAGGCAAATACCAGACGTCCGGTACCACCATGCCCAAAAATGGACCCCATTCTTTATGCCCGATCAACCCAGCCAGGGCAAGATCCGGGGCAAGCCCTACCTCCCCAGGTGCCATTCCCAAAAACCCACCCCCATTCCTTTGCGCCTAGACCATTCCTGCCTAAGGCAAGACCCTTCCCCGATGCCATACCCTTAGTCCATACCTTGCCAGGGCAAGACCCGAGGCAAACTCTACTCAATGCTATGCCAAATACCAACCCCCAGTCCTTTGTGCCCGGTCCATACTCAGCAAGGGCATGCACCAGGGCAAATATCAGAAACCTGGGGCAAACATACCCACCCCAATCTTCTTTACCTGGTTTCCCTAATATGAAGTCCAACTGGGGACTTAATGGTTGGGACGAGGGATTGATGAAATCCAACCGAATCGAAGGGAAAAAATCGCAAGGGAGAGGGAGGTTTCAACGGGTGGGAAGAGAGAGAAAAGACGGAGAAAAACTTCTGAAATTATCAGAAGGGCAATATCGAAACATCATGATCAGCTCAATTCCCTCTCCCAGCCCGTTGAATCGGTTGACGTTCGCTCTCCAATTTCGCGCTAAAAGTAATACGAAGGCTCCAGCATTTTCTGCTCGTCTTGACGATTCTAAGAACTCAGCTAATCAGCAACTCAATCTCTCTGTCCTTCGGTTCACACTCGGTATCTCTCTCTCTCTCTGGAAATTGGTACTTTCTAAAGGAATTGACAATTTGGGGATTTGGGAACAAGTGATTTTTTTCAGTGTAACATTTCGTCGGATTCCTGGGTTGGATGAGTCTTACTTACCCAGATGGATTGGCTATGGATTTGGTTCACTTCTTCTATTGAATCACTTTGTTGGTTCGAATTCAGCTGCTCTCACCACCCCAGCACAGTCAAGAACTGAGGCTTTAGGCATTTCCTTGGCAGCATTTTCTATTGCACTCCCTTACTTGGGAAAATATTACATTGCTGTCTTGCGTATATACTTCTTCTTTCATCTTCTTTTTCTACTTACTAGAAAACTTCCGCCAACCTCTGTAAGAGTGGAGAAAAAAGGAGCCAAAAAAGGGAGAGAACTAGAGGAACTTGAAACTGCTGTCCTTAGCACTGCTACAGTCCCATTGTCTGCCGTCGGTCAAATTCCAAATGCCAATTCAATTAAATACTTATCAATAAATATCAAATCTTATTCACTTTGTACTTGCTTGGCTGCTGCTTTCTGCTTAATAAGGAAAAGTACCCATCTTTGCCTGCAGGGTGCAGTTCCATCTGGCGAAGCTACCCTCCCTGAAGGCACTGAGCAAATATTTCTCTTGTCACAAATTGTATTGGATGATGTGAAGGAAGACTTGGCTTGGGCAACATACATCTTGCTGCGCAATACAAACAGTATATCAGTGGTATCTCTCAGATTTTTGTCACTCACATACATTTTACTTCACAAATATGTAGTAAGAGAACACGGTGTATTCAACAAACTACATTATTTAGCTTTCCTTGATACCTTAATACAGACTCAAGGGGCATTATGTGTTCGAGGATACTGGAATAGTCCAAATGATAAATCAGGAGCAGATTTACTTGCCTGGTTTGAGGAGCAGCTTCAGAGCATCGGCTTATCTGCATTAAAGGATGCCCTCTATTTCCCTCAGATTTCAGAATCTGGACTGTGGCAAATGCTGCCTGAGGGCACTCGCTCGGTTTTGGTACAACCGGTTGTTCAAAATCTAAAGCAAAGTGGCAATGAGATGGAAAAGATGGGAGGATTCATACTGCTGGCCTCAAGTTTAAGTTATGCATTTAGCGATAAAGATAGAGCCTGGATAAGAGCTCTTGCTAGCAAGTTTGGTGACAGGGCCATCCTCTGA

Coding sequence (CDS)

ATGAGAAAAAAACAAATAACAAAATCCCGAAAATACCCGGGCAGGGTTGGGATCGAGTCAAAAAATAGTGAAAAATTATCCCCCCAGTTTACTGTACCCGGTCAATACCCGACGAAGGCAAATACCAGACGTCCGGTACCACCATGCCCAAAAATGGACCCCATTCTTTATGCCCGATCAACCCAGCCAGGGCAAGATCCGGGGCAAGCCCTACCTCCCCAGGTGCCATTCCCAAAAACCCACCCCCATTCCTTTGCGCCTAGACCATTCCTGCCTAAGGCAAGACCCTTCCCCGATGCCATACCCTTAGTCCATACCTTGCCAGGGCAAGACCCGAGGCAAACTCTACTCAATGCTATGCCAAATACCAACCCCCAGTCCTTTGTGCCCGGTCCATACTCAGCAAGGGCATGCACCAGGGCAAATATCAGAAACCTGGGGCAAACATACCCACCCCAATCTTCTTTACCTGGTTTCCCTAATATGAAGTCCAACTGGGGACTTAATGGTTGGGACGAGGGATTGATGAAATCCAACCGAATCGAAGGGAAAAAATCGCAAGGGAGAGGGAGGTTTCAACGGGTGGGAAGAGAGAGAAAAGACGGAGAAAAACTTCTGAAATTATCAGAAGGGCAATATCGAAACATCATGATCAGCTCAATTCCCTCTCCCAGCCCGTTGAATCGGTTGACGTTCGCTCTCCAATTTCGCGCTAAAAGTAATACGAAGGCTCCAGCATTTTCTGCTCGTCTTGACGATTCTAAGAACTCAGCTAATCAGCAACTCAATCTCTCTGTCCTTCGGTTCACACTCGGTATCTCTCTCTCTCTCTGGAAATTGGTACTTTCTAAAGGAATTGACAATTTGGGGATTTGGGAACAAGTGATTTTTTTCAGTGTAACATTTCGTCGGATTCCTGGGTTGGATGAGTCTTACTTACCCAGATGGATTGGCTATGGATTTGGTTCACTTCTTCTATTGAATCACTTTGTTGGTTCGAATTCAGCTGCTCTCACCACCCCAGCACAGTCAAGAACTGAGGCTTTAGGCATTTCCTTGGCAGCATTTTCTATTGCACTCCCTTACTTGGGAAAATATTACATTGCTGTCTTGCGTATATACTTCTTCTTTCATCTTCTTTTTCTACTTACTAGAAAACTTCCGCCAACCTCTGTAAGAGTGGAGAAAAAAGGAGCCAAAAAAGGGAGAGAACTAGAGGAACTTGAAACTGCTGTCCTTAGCACTGCTACAGTCCCATTGTCTGCCGTCGGTCAAATTCCAAATGCCAATTCAATTAAATACTTATCAATAAATATCAAATCTTATTCACTTTGTACTTGCTTGGCTGCTGCTTTCTGCTTAATAAGGAAAAGTACCCATCTTTGCCTGCAGGGTGCAGTTCCATCTGGCGAAGCTACCCTCCCTGAAGGCACTGAGCAAATATTTCTCTTGTCACAAATTGTATTGGATGATGTGAAGGAAGACTTGGCTTGGGCAACATACATCTTGCTGCGCAATACAAACAGTATATCAGTGGTATCTCTCAGATTTTTGTCACTCACATACATTTTACTTCACAAATATGTAGTAAGAGAACACGGTGTATTCAACAAACTACATTATTTAGCTTTCCTTGATACCTTAATACAGACTCAAGGGGCATTATGTGTTCGAGGATACTGGAATAGTCCAAATGATAAATCAGGAGCAGATTTACTTGCCTGGTTTGAGGAGCAGCTTCAGAGCATCGGCTTATCTGCATTAAAGGATGCCCTCTATTTCCCTCAGATTTCAGAATCTGGACTGTGGCAAATGCTGCCTGAGGGCACTCGCTCGGTTTTGGTACAACCGGTTGTTCAAAATCTAAAGCAAAGTGGCAATGAGATGGAAAAGATGGGAGGATTCATACTGCTGGCCTCAAGTTTAAGTTATGCATTTAGCGATAAAGATAGAGCCTGGATAAGAGCTCTTGCTAGCAAGTTTGGTGACAGGGCCATCCTCTGA

Protein sequence

MRKKQITKSRKYPGRVGIESKNSEKLSPQFTVPGQYPTKANTRRPVPPCPKMDPILYARSTQPGQDPGQALPPQVPFPKTHPHSFAPRPFLPKARPFPDAIPLVHTLPGQDPRQTLLNAMPNTNPQSFVPGPYSARACTRANIRNLGQTYPPQSSLPGFPNMKSNWGLNGWDEGLMKSNRIEGKKSQGRGRFQRVGRERKDGEKLLKLSEGQYRNIMISSIPSPSPLNRLTFALQFRAKSNTKAPAFSARLDDSKNSANQQLNLSVLRFTLGISLSLWKLVLSKGIDNLGIWEQVIFFSVTFRRIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQSRTEALGISLAAFSIALPYLGKYYIAVLRIYFFFHLLFLLTRKLPPTSVRVEKKGAKKGRELEELETAVLSTATVPLSAVGQIPNANSIKYLSINIKSYSLCTCLAAAFCLIRKSTHLCLQGAVPSGEATLPEGTEQIFLLSQIVLDDVKEDLAWATYILLRNTNSISVVSLRFLSLTYILLHKYVVREHGVFNKLHYLAFLDTLIQTQGALCVRGYWNSPNDKSGADLLAWFEEQLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPVVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALASKFGDRAIL

Homology

[Close]

BLAST of CaUC05G088360 vs. NCBI nr
Match: XP_016899091.1 (PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 [Cucumis melo] >XP_016899092.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 [Cucumis melo] >KAA0033616.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2 [Cucumis melo var. makuwa] >TYK22282.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2 [Cucumis melo var. makuwa])

HSP 1 Score: 450.7 bits (1158), Expect = 2.2e-122
Identity = 269/451 (59.65%), Postives = 278/451 (61.64%), Query Frame = 0


Query: 217 MISSIPSPSPLNRLTFALQFRAKSNTKAPAFSARLDDSKNSANQQLNLSVLRFTLGISLS 276
           MISSIPSPSPLN+LT AL FRAKS  KAPA SARLDDSKNSANQQLNLSVLRFTLG    
Sbjct: 1   MISSIPSPSPLNQLTSALPFRAKSKMKAPAISARLDDSKNSANQQLNLSVLRFTLG---- 60

Query: 277 LWKLVLSKGIDNLGIWEQVIFFSVTFRRIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSA 336
                                       IPGLDESYLPRWIGYGFGSLLLLNHFVGSNSA
Sbjct: 61  ----------------------------IPGLDESYLPRWIGYGFGSLLLLNHFVGSNSA 120

Query: 337 ALTTPAQSRTEALGISLAAFSIALPYLGKYYIAVLRIYFFFHLLFLLTRKLPPTSVRVEK 396
           ALTTPAQ RTEALGISLAAFSIALPYLGK+                              
Sbjct: 121 ALTTPAQLRTEALGISLAAFSIALPYLGKF------------------------------ 180

Query: 397 KGAKKGRELEELETAVLSTATVPLSAVGQIPNANSIKYLSINIKSYSLCTCLAAAFCLIR 456
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 457 KSTHLCLQGAVPSGEATLPEGTEQIFLLSQIVLDDVKEDLAWATYILLRNTNSISVVSLR 516
                 L+GAVPSGEATLPEGTEQIFLLSQIV D++KED+AWATYILLRNTNSISV    
Sbjct: 241 ------LKGAVPSGEATLPEGTEQIFLLSQIVSDNLKEDIAWATYILLRNTNSISV---- 288

Query: 517 FLSLTYILLHKYVVREHGVFNKLHYLAFLDTLIQTQGALCVRGYWNSPNDKSGADLLAWF 576
                                          LIQTQGALCVRGYWNSPND S ADLLAWF
Sbjct: 301 -------------------------------LIQTQGALCVRGYWNSPNDISSADLLAWF 288

Query: 577 EEQLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPVVQNLKQSGNEMEKMGGFI 636
           EEQLQSIGLSALKDA+YFPQISESGLWQMLP+GTRSVLVQPVVQNLKQSGNEMEKMGGFI
Sbjct: 361 EEQLQSIGLSALKDAVYFPQISESGLWQMLPKGTRSVLVQPVVQNLKQSGNEMEKMGGFI 288

Query: 637 LLASSLSYAFSDKDRAWIRALASKFGDRAIL 668
           LLASSLSYAFSDKDRAWIRALA+KF DRAIL
Sbjct: 421 LLASSLSYAFSDKDRAWIRALANKFDDRAIL 288

[Close]

BLAST of CaUC05G088360 vs. NCBI nr
Match: XP_038884000.1 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Benincasa hispida] >XP_038884007.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Benincasa hispida])

HSP 1 Score: 441.8 bits (1135), Expect = 1.0e-119
Identity = 265/451 (58.76%), Postives = 274/451 (60.75%), Query Frame = 0


Query: 217 MISSIPSPSPLNRLTFALQFRAKSNTKAPAFSARLDDSKNSANQQLNLSVLRFTLGISLS 276
           MISSIPSPSPLNRLT A +FRAK+ TK PA SARLDDSKNSANQQLNLSVLRFTLG    
Sbjct: 1   MISSIPSPSPLNRLTSAHRFRAKTKTKGPAISARLDDSKNSANQQLNLSVLRFTLG---- 60

Query: 277 LWKLVLSKGIDNLGIWEQVIFFSVTFRRIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSA 336
                                       IPGLDESYLPRWIGYGFGSLLLLNHFVGSNSA
Sbjct: 61  ----------------------------IPGLDESYLPRWIGYGFGSLLLLNHFVGSNSA 120

Query: 337 ALTTPAQSRTEALGISLAAFSIALPYLGKYYIAVLRIYFFFHLLFLLTRKLPPTSVRVEK 396
           ALTTPAQ RTEALG+SLAAFSIALPYLGK+                              
Sbjct: 121 ALTTPAQLRTEALGVSLAAFSIALPYLGKF------------------------------ 180

Query: 397 KGAKKGRELEELETAVLSTATVPLSAVGQIPNANSIKYLSINIKSYSLCTCLAAAFCLIR 456
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 457 KSTHLCLQGAVPSGEATLPEGTEQIFLLSQIVLDDVKEDLAWATYILLRNTNSISVVSLR 516
                 L+GAVPSGEATLP  TEQIFLLSQIV D+VKEDLAWATYILLRNTNSISV    
Sbjct: 241 ------LKGAVPSGEATLPGDTEQIFLLSQIVSDNVKEDLAWATYILLRNTNSISV---- 288

Query: 517 FLSLTYILLHKYVVREHGVFNKLHYLAFLDTLIQTQGALCVRGYWNSPNDKSGADLLAWF 576
                                          LIQ QGALCVRGYWNSPND SGADLLAWF
Sbjct: 301 -------------------------------LIQIQGALCVRGYWNSPNDISGADLLAWF 288

Query: 577 EEQLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPVVQNLKQSGNEMEKMGGFI 636
           EEQLQ IGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPVVQNLKQ+G+EMEKMGGFI
Sbjct: 361 EEQLQIIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPVVQNLKQNGSEMEKMGGFI 288

Query: 637 LLASSLSYAFSDKDRAWIRALASKFGDRAIL 668
           LLASSLSYAF DKDRAWIRALA+KF DRAIL
Sbjct: 421 LLASSLSYAFGDKDRAWIRALANKFDDRAIL 288

[Close]

BLAST of CaUC05G088360 vs. NCBI nr
Match: XP_004140790.1 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X2 [Cucumis sativus] >KGN57346.1 hypothetical protein Csa_009916 [Cucumis sativus])

HSP 1 Score: 441.4 bits (1134), Expect = 1.4e-119
Identity = 262/451 (58.09%), Postives = 276/451 (61.20%), Query Frame = 0


Query: 217 MISSIPSPSPLNRLTFALQFRAKSNTKAPAFSARLDDSKNSANQQLNLSVLRFTLGISLS 276
           MISSIPSPSPLN+LT AL FRAKS TK PA SARLDDSKNSANQQLNLSVLRFTLG    
Sbjct: 1   MISSIPSPSPLNQLTSALSFRAKSKTKGPAISARLDDSKNSANQQLNLSVLRFTLG---- 60

Query: 277 LWKLVLSKGIDNLGIWEQVIFFSVTFRRIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSA 336
                                       IPGLDESYLPRWIGYGFGSLLLLNHFVGSNSA
Sbjct: 61  ----------------------------IPGLDESYLPRWIGYGFGSLLLLNHFVGSNSA 120

Query: 337 ALTTPAQSRTEALGISLAAFSIALPYLGKYYIAVLRIYFFFHLLFLLTRKLPPTSVRVEK 396
           ALTTPAQ RTEALGISLAAFSIALPYLGK+                              
Sbjct: 121 ALTTPAQLRTEALGISLAAFSIALPYLGKF------------------------------ 180

Query: 397 KGAKKGRELEELETAVLSTATVPLSAVGQIPNANSIKYLSINIKSYSLCTCLAAAFCLIR 456
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 457 KSTHLCLQGAVPSGEATLPEGTEQIFLLSQIVLDDVKEDLAWATYILLRNTNSISVVSLR 516
                 L+GA+PSGEA LPEGTEQIFLLSQI+ D++KED+AWATYILLRNTNSISV    
Sbjct: 241 ------LKGALPSGEAILPEGTEQIFLLSQILSDNLKEDIAWATYILLRNTNSISV---- 288

Query: 517 FLSLTYILLHKYVVREHGVFNKLHYLAFLDTLIQTQGALCVRGYWNSPNDKSGADLLAWF 576
                                          LIQTQGALCVRGYWNSPND S ADLLAWF
Sbjct: 301 -------------------------------LIQTQGALCVRGYWNSPNDISSADLLAWF 288

Query: 577 EEQLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPVVQNLKQSGNEMEKMGGFI 636
           EEQLQSIGLSALKDA+YFPQISESGLWQMLP+GTRSVLVQPVVQNLKQSGNE++ MGGFI
Sbjct: 361 EEQLQSIGLSALKDAVYFPQISESGLWQMLPKGTRSVLVQPVVQNLKQSGNEVQNMGGFI 288

Query: 637 LLASSLSYAFSDKDRAWIRALASKFGDRAIL 668
           LLASSLSYAFSDKDRAWIRA+A+KF DRAIL
Sbjct: 421 LLASSLSYAFSDKDRAWIRAVANKFDDRAIL 288

[Close]

BLAST of CaUC05G088360 vs. NCBI nr
Match: XP_031738698.1 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 434.5 bits (1116), Expect = 1.7e-117
Identity = 262/458 (57.21%), Postives = 276/458 (60.26%), Query Frame = 0


Query: 217 MISSIPSPSPLNRLTFALQFRAKSNTKAPAFSARLDDSKNSANQQLNLSVLRFTLGISLS 276
           MISSIPSPSPLN+LT AL FRAKS TK PA SARLDDSKNSANQQLNLSVLRFTLG    
Sbjct: 1   MISSIPSPSPLNQLTSALSFRAKSKTKGPAISARLDDSKNSANQQLNLSVLRFTLG---- 60

Query: 277 LWKLVLSKGIDNLGIWEQVIFFSVTFRRIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSA 336
                                       IPGLDESYLPRWIGYGFGSLLLLNHFVGSNSA
Sbjct: 61  ----------------------------IPGLDESYLPRWIGYGFGSLLLLNHFVGSNSA 120

Query: 337 ALTTPAQSRTEALGISLAAFSIALPYLGKYYIAVLRIYFFFHLLFLLTRKLPPTSVRVEK 396
           ALTTPAQ RTEALGISLAAFSIALPYLGK+                              
Sbjct: 121 ALTTPAQLRTEALGISLAAFSIALPYLGKF------------------------------ 180

Query: 397 KGAKKGRELEELETAVLSTATVPLSAVGQIPNANSIKYLSINIKSYSLCTCLAAAFCLIR 456
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 457 KSTHLCLQGAVPSGEATLPEGTEQIFLLSQIVLDDVKEDLAWATYILLRNTNSISVVSLR 516
                 L+GA+PSGEA LPEGTEQIFLLSQI+ D++KED+AWATYILLRNTNSISV    
Sbjct: 241 ------LKGALPSGEAILPEGTEQIFLLSQILSDNLKEDIAWATYILLRNTNSISV---- 295

Query: 517 FLSLTYILLHKYVVREHGVFNKLHYLAFLDTLIQTQGALCVRGYWNSPNDKSGADLLAWF 576
                                          LIQTQGALCVRGYWNSPND S ADLLAWF
Sbjct: 301 -------------------------------LIQTQGALCVRGYWNSPNDISSADLLAWF 295

Query: 577 EEQLQSIGLSALKDALYFPQIS-------ESGLWQMLPEGTRSVLVQPVVQNLKQSGNEM 636
           EEQLQSIGLSALKDA+YFPQIS       ESGLWQMLP+GTRSVLVQPVVQNLKQSGNE+
Sbjct: 361 EEQLQSIGLSALKDAVYFPQISGFQHYFPESGLWQMLPKGTRSVLVQPVVQNLKQSGNEV 295

Query: 637 EKMGGFILLASSLSYAFSDKDRAWIRALASKFGDRAIL 668
           + MGGFILLASSLSYAFSDKDRAWIRA+A+KF DRAIL
Sbjct: 421 QNMGGFILLASSLSYAFSDKDRAWIRAVANKFDDRAIL 295

[Close]

BLAST of CaUC05G088360 vs. NCBI nr
Match: XP_023542853.1 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023542854.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023542855.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023542856.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023542857.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023542858.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023542859.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 395.2 bits (1014), Expect = 1.1e-105
Identity = 240/446 (53.81%), Postives = 257/446 (57.62%), Query Frame = 0


Query: 216 IMISSIPSPSPLNRLTFALQFRAKSNTKAPAFSARLDDSKNSANQQLNLSVLRFTLGISL 275
           IM  +I SP PL RL+   +FRAK+ +K+P  +ARLDDSKNS N+QLNLSVLRFTLG   
Sbjct: 13  IMSCTILSPDPLIRLSSTHRFRAKNGSKSPVITARLDDSKNSPNRQLNLSVLRFTLG--- 72

Query: 276 SLWKLVLSKGIDNLGIWEQVIFFSVTFRRIPGLDESYLPRWIGYGFGSLLLLNHFVGSNS 335
                                        IPGLDESYLPRWIGYGFGSLLLLNHFVGSNS
Sbjct: 73  -----------------------------IPGLDESYLPRWIGYGFGSLLLLNHFVGSNS 132

Query: 336 AALTTPAQSRTEALGISLAAFSIALPYLGKYYIAVLRIYFFFHLLFLLTRKLPPTSVRVE 395
           AA  T AQ RTEALGISLAAFSIALPYLGK+                             
Sbjct: 133 AAPITSAQLRTEALGISLAAFSIALPYLGKF----------------------------- 192

Query: 396 KKGAKKGRELEELETAVLSTATVPLSAVGQIPNANSIKYLSINIKSYSLCTCLAAAFCLI 455
                                                                       
Sbjct: 193 ------------------------------------------------------------ 252

Query: 456 RKSTHLCLQGAVPSGEATLPEGTEQIFLLSQIVLDDVKEDLAWATYILLRNTNSISVVSL 515
                  L+GAVPSGEATLPEG EQIF+LSQ V D+VK+DLAWATYILLRNTNSISV   
Sbjct: 253 -------LEGAVPSGEATLPEGAEQIFVLSQNVSDNVKDDLAWATYILLRNTNSISV--- 295

Query: 516 RFLSLTYILLHKYVVREHGVFNKLHYLAFLDTLIQTQGALCVRGYWNSPNDKSGADLLAW 575
                                           LIQ QG LCVRGYWNSPND SG DLLAW
Sbjct: 313 --------------------------------LIQIQGELCVRGYWNSPNDISGTDLLAW 295

Query: 576 FEEQLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPVVQNLKQSGNEMEKMGGF 635
           FEEQLQSIGLSAL DALYFPQISESGLWQMLP+GTRSVLVQPV QNL QSGNEMEK+GGF
Sbjct: 373 FEEQLQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGF 295

Query: 636 ILLASSLSYAFSDKDRAWIRALASKF 662
           IL+ASSLSYAFSDKDRAWIRALA+KF
Sbjct: 433 ILVASSLSYAFSDKDRAWIRALATKF 295

[Close]

BLAST of CaUC05G088360 vs. ExPASy Swiss-Prot
Match: Q9FJ81 (Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CCB2 PE=1 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.7e-56
Identity = 155/431 (35.96%), Postives = 204/431 (47.33%), Query Frame = 0


Query: 232 FALQFRAKSNTKAPAFSARLDDSKNSANQQLNLSVLRFTLGISLSLWKLVLSKGIDNLGI 291
           FALQ RA+ +T+  A +        +++QQLNLSVLRFT G                   
Sbjct: 14  FALQPRAQRSTRIFARTENDSPQSKTSDQQLNLSVLRFTFG------------------- 73

Query: 292 WEQVIFFSVTFRRIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQSRTEALGI 351
                        IPG DESYLPRWIGYGFGSLLLLNHF   +++A  + +Q R+EALG+
Sbjct: 74  -------------IPGFDESYLPRWIGYGFGSLLLLNHF---SASAPISESQMRSEALGL 133

Query: 352 SLAAFSIALPYLGKYYIAVLRIYFFFHLLFLLTRKLPPTSVRVEKKGAKKGRELEELETA 411
           SLAAFSIALPY+GK+                                             
Sbjct: 134 SLAAFSIALPYIGKF--------------------------------------------- 193

Query: 412 VLSTATVPLSAVGQIPNANSIKYLSINIKSYSLCTCLAAAFCLIRKSTHLCLQGAVPSGE 471
                                                              L+G+V   +
Sbjct: 194 ---------------------------------------------------LKGSVVE-Q 253

Query: 472 ATLPEGTEQIFLLSQIVLDDVKEDLAWATYILLRNTNSISVVSLRFLSLTYILLHKYVVR 531
            +LPE  EQ+F++S  + D +KEDLAWATY+LLRNT++I+V                   
Sbjct: 254 RSLPEEGEQVFVISSNIGDSLKEDLAWATYVLLRNTSTIAV------------------- 273

Query: 532 EHGVFNKLHYLAFLDTLIQTQGALCVRGYWNSPNDKSGADLLAWFEEQLQSIGLSALKDA 591
                           LI  QG LCVRGYWN P+  S A L  WF++++  IGL+ +K+ 
Sbjct: 314 ----------------LISVQGELCVRGYWNCPDQMSKAQLHDWFKKKVDEIGLADVKET 273

Query: 592 LYFPQISESGL-WQMLPEGTRSVLVQPVVQNLKQSGNEMEKMGGFILLASSLSYAFSDKD 651
           LYFPQ + S L   +LP+GTRS+ VQP+VQN     NE +K+ GF+L+AS+  YA+SDKD
Sbjct: 374 LYFPQYAGSALSLDILPDGTRSLFVQPLVQNT----NEPQKVNGFLLVASTAGYAYSDKD 273

Query: 652 RAWIRALASKF 662
           RAWI A+A KF
Sbjct: 434 RAWIGAMAEKF 273

[Close]

BLAST of CaUC05G088360 vs. ExPASy TrEMBL
Match: A0A1S4DSW9 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484048 PE=4 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 1.1e-122
Identity = 269/451 (59.65%), Postives = 278/451 (61.64%), Query Frame = 0


Query: 217 MISSIPSPSPLNRLTFALQFRAKSNTKAPAFSARLDDSKNSANQQLNLSVLRFTLGISLS 276
           MISSIPSPSPLN+LT AL FRAKS  KAPA SARLDDSKNSANQQLNLSVLRFTLG    
Sbjct: 1   MISSIPSPSPLNQLTSALPFRAKSKMKAPAISARLDDSKNSANQQLNLSVLRFTLG---- 60

Query: 277 LWKLVLSKGIDNLGIWEQVIFFSVTFRRIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSA 336
                                       IPGLDESYLPRWIGYGFGSLLLLNHFVGSNSA
Sbjct: 61  ----------------------------IPGLDESYLPRWIGYGFGSLLLLNHFVGSNSA 120

Query: 337 ALTTPAQSRTEALGISLAAFSIALPYLGKYYIAVLRIYFFFHLLFLLTRKLPPTSVRVEK 396
           ALTTPAQ RTEALGISLAAFSIALPYLGK+                              
Sbjct: 121 ALTTPAQLRTEALGISLAAFSIALPYLGKF------------------------------ 180

Query: 397 KGAKKGRELEELETAVLSTATVPLSAVGQIPNANSIKYLSINIKSYSLCTCLAAAFCLIR 456
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 457 KSTHLCLQGAVPSGEATLPEGTEQIFLLSQIVLDDVKEDLAWATYILLRNTNSISVVSLR 516
                 L+GAVPSGEATLPEGTEQIFLLSQIV D++KED+AWATYILLRNTNSISV    
Sbjct: 241 ------LKGAVPSGEATLPEGTEQIFLLSQIVSDNLKEDIAWATYILLRNTNSISV---- 288

Query: 517 FLSLTYILLHKYVVREHGVFNKLHYLAFLDTLIQTQGALCVRGYWNSPNDKSGADLLAWF 576
                                          LIQTQGALCVRGYWNSPND S ADLLAWF
Sbjct: 301 -------------------------------LIQTQGALCVRGYWNSPNDISSADLLAWF 288

Query: 577 EEQLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPVVQNLKQSGNEMEKMGGFI 636
           EEQLQSIGLSALKDA+YFPQISESGLWQMLP+GTRSVLVQPVVQNLKQSGNEMEKMGGFI
Sbjct: 361 EEQLQSIGLSALKDAVYFPQISESGLWQMLPKGTRSVLVQPVVQNLKQSGNEMEKMGGFI 288

Query: 637 LLASSLSYAFSDKDRAWIRALASKFGDRAIL 668
           LLASSLSYAFSDKDRAWIRALA+KF DRAIL
Sbjct: 421 LLASSLSYAFSDKDRAWIRALANKFDDRAIL 288

[Close]

BLAST of CaUC05G088360 vs. ExPASy TrEMBL
Match: A0A5A7SUJ0 (Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold440G00380 PE=4 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 1.1e-122
Identity = 269/451 (59.65%), Postives = 278/451 (61.64%), Query Frame = 0


Query: 217 MISSIPSPSPLNRLTFALQFRAKSNTKAPAFSARLDDSKNSANQQLNLSVLRFTLGISLS 276
           MISSIPSPSPLN+LT AL FRAKS  KAPA SARLDDSKNSANQQLNLSVLRFTLG    
Sbjct: 1   MISSIPSPSPLNQLTSALPFRAKSKMKAPAISARLDDSKNSANQQLNLSVLRFTLG---- 60

Query: 277 LWKLVLSKGIDNLGIWEQVIFFSVTFRRIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSA 336
                                       IPGLDESYLPRWIGYGFGSLLLLNHFVGSNSA
Sbjct: 61  ----------------------------IPGLDESYLPRWIGYGFGSLLLLNHFVGSNSA 120

Query: 337 ALTTPAQSRTEALGISLAAFSIALPYLGKYYIAVLRIYFFFHLLFLLTRKLPPTSVRVEK 396
           ALTTPAQ RTEALGISLAAFSIALPYLGK+                              
Sbjct: 121 ALTTPAQLRTEALGISLAAFSIALPYLGKF------------------------------ 180

Query: 397 KGAKKGRELEELETAVLSTATVPLSAVGQIPNANSIKYLSINIKSYSLCTCLAAAFCLIR 456
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 457 KSTHLCLQGAVPSGEATLPEGTEQIFLLSQIVLDDVKEDLAWATYILLRNTNSISVVSLR 516
                 L+GAVPSGEATLPEGTEQIFLLSQIV D++KED+AWATYILLRNTNSISV    
Sbjct: 241 ------LKGAVPSGEATLPEGTEQIFLLSQIVSDNLKEDIAWATYILLRNTNSISV---- 288

Query: 517 FLSLTYILLHKYVVREHGVFNKLHYLAFLDTLIQTQGALCVRGYWNSPNDKSGADLLAWF 576
                                          LIQTQGALCVRGYWNSPND S ADLLAWF
Sbjct: 301 -------------------------------LIQTQGALCVRGYWNSPNDISSADLLAWF 288

Query: 577 EEQLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPVVQNLKQSGNEMEKMGGFI 636
           EEQLQSIGLSALKDA+YFPQISESGLWQMLP+GTRSVLVQPVVQNLKQSGNEMEKMGGFI
Sbjct: 361 EEQLQSIGLSALKDAVYFPQISESGLWQMLPKGTRSVLVQPVVQNLKQSGNEMEKMGGFI 288

Query: 637 LLASSLSYAFSDKDRAWIRALASKFGDRAIL 668
           LLASSLSYAFSDKDRAWIRALA+KF DRAIL
Sbjct: 421 LLASSLSYAFSDKDRAWIRALANKFDDRAIL 288

[Close]

BLAST of CaUC05G088360 vs. ExPASy TrEMBL
Match: A0A0A0LBA9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G180340 PE=4 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 6.6e-120
Identity = 262/451 (58.09%), Postives = 276/451 (61.20%), Query Frame = 0


Query: 217 MISSIPSPSPLNRLTFALQFRAKSNTKAPAFSARLDDSKNSANQQLNLSVLRFTLGISLS 276
           MISSIPSPSPLN+LT AL FRAKS TK PA SARLDDSKNSANQQLNLSVLRFTLG    
Sbjct: 1   MISSIPSPSPLNQLTSALSFRAKSKTKGPAISARLDDSKNSANQQLNLSVLRFTLG---- 60

Query: 277 LWKLVLSKGIDNLGIWEQVIFFSVTFRRIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSA 336
                                       IPGLDESYLPRWIGYGFGSLLLLNHFVGSNSA
Sbjct: 61  ----------------------------IPGLDESYLPRWIGYGFGSLLLLNHFVGSNSA 120

Query: 337 ALTTPAQSRTEALGISLAAFSIALPYLGKYYIAVLRIYFFFHLLFLLTRKLPPTSVRVEK 396
           ALTTPAQ RTEALGISLAAFSIALPYLGK+                              
Sbjct: 121 ALTTPAQLRTEALGISLAAFSIALPYLGKF------------------------------ 180

Query: 397 KGAKKGRELEELETAVLSTATVPLSAVGQIPNANSIKYLSINIKSYSLCTCLAAAFCLIR 456
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 457 KSTHLCLQGAVPSGEATLPEGTEQIFLLSQIVLDDVKEDLAWATYILLRNTNSISVVSLR 516
                 L+GA+PSGEA LPEGTEQIFLLSQI+ D++KED+AWATYILLRNTNSISV    
Sbjct: 241 ------LKGALPSGEAILPEGTEQIFLLSQILSDNLKEDIAWATYILLRNTNSISV---- 288

Query: 517 FLSLTYILLHKYVVREHGVFNKLHYLAFLDTLIQTQGALCVRGYWNSPNDKSGADLLAWF 576
                                          LIQTQGALCVRGYWNSPND S ADLLAWF
Sbjct: 301 -------------------------------LIQTQGALCVRGYWNSPNDISSADLLAWF 288

Query: 577 EEQLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPVVQNLKQSGNEMEKMGGFI 636
           EEQLQSIGLSALKDA+YFPQISESGLWQMLP+GTRSVLVQPVVQNLKQSGNE++ MGGFI
Sbjct: 361 EEQLQSIGLSALKDAVYFPQISESGLWQMLPKGTRSVLVQPVVQNLKQSGNEVQNMGGFI 288

Query: 637 LLASSLSYAFSDKDRAWIRALASKFGDRAIL 668
           LLASSLSYAFSDKDRAWIRA+A+KF DRAIL
Sbjct: 421 LLASSLSYAFSDKDRAWIRAVANKFDDRAIL 288

[Close]

BLAST of CaUC05G088360 vs. ExPASy TrEMBL
Match: A0A6J1G0N4 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449603 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 2.1e-105
Identity = 239/446 (53.59%), Postives = 258/446 (57.85%), Query Frame = 0


Query: 216 IMISSIPSPSPLNRLTFALQFRAKSNTKAPAFSARLDDSKNSANQQLNLSVLRFTLGISL 275
           IM  +I SP PL RL+   +FRAK+ +K+P  +ARLDDSKNS ++QLNLSVLRFTLG   
Sbjct: 16  IMSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPSRQLNLSVLRFTLG--- 75

Query: 276 SLWKLVLSKGIDNLGIWEQVIFFSVTFRRIPGLDESYLPRWIGYGFGSLLLLNHFVGSNS 335
                                        IPGLDESYLPRWIGYGFGSLLLLNHFVGS+S
Sbjct: 76  -----------------------------IPGLDESYLPRWIGYGFGSLLLLNHFVGSSS 135

Query: 336 AALTTPAQSRTEALGISLAAFSIALPYLGKYYIAVLRIYFFFHLLFLLTRKLPPTSVRVE 395
           AA  T AQ RTEALGISLAAFSIALPYLGK+                             
Sbjct: 136 AAPITSAQLRTEALGISLAAFSIALPYLGKF----------------------------- 195

Query: 396 KKGAKKGRELEELETAVLSTATVPLSAVGQIPNANSIKYLSINIKSYSLCTCLAAAFCLI 455
                                                                       
Sbjct: 196 ------------------------------------------------------------ 255

Query: 456 RKSTHLCLQGAVPSGEATLPEGTEQIFLLSQIVLDDVKEDLAWATYILLRNTNSISVVSL 515
                  L+GAVPSGEATLPEG EQIF+LSQ V D+VK+DLAWATYILLRNTNSISV   
Sbjct: 256 -------LEGAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISV--- 298

Query: 516 RFLSLTYILLHKYVVREHGVFNKLHYLAFLDTLIQTQGALCVRGYWNSPNDKSGADLLAW 575
                                           LIQ QG LCVRGYWNSPND SGADLLAW
Sbjct: 316 --------------------------------LIQIQGELCVRGYWNSPNDISGADLLAW 298

Query: 576 FEEQLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPVVQNLKQSGNEMEKMGGF 635
           FEEQLQSIGLSAL DALYFPQISESGLWQMLP+GTRSVLVQPV QNL QSGNEMEK+GGF
Sbjct: 376 FEEQLQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVAQNLNQSGNEMEKIGGF 298

Query: 636 ILLASSLSYAFSDKDRAWIRALASKF 662
           IL+ASSLSYAFSDKDRAWIRALA+KF
Sbjct: 436 ILVASSLSYAFSDKDRAWIRALATKF 298

[Close]

BLAST of CaUC05G088360 vs. ExPASy TrEMBL
Match: A0A6J1CJH9 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011568 PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 7.8e-105
Identity = 243/451 (53.88%), Postives = 259/451 (57.43%), Query Frame = 0


Query: 217 MISSIPSPSPLNRLTFALQFRAKSNTKAPAFSARLDDSKNSANQQLNLSVLRFTLGISLS 276
           M  SI SP+PL RLT   +FRAK+  KAPA SARLDDSKNSANQQLNLSVLRFTLG    
Sbjct: 1   MTGSILSPNPLIRLTSTPRFRAKTRLKAPAVSARLDDSKNSANQQLNLSVLRFTLG---- 60

Query: 277 LWKLVLSKGIDNLGIWEQVIFFSVTFRRIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSA 336
                                       IPGLDESYLPRWIGYGFGSLLLLNHF GSNSA
Sbjct: 61  ----------------------------IPGLDESYLPRWIGYGFGSLLLLNHFFGSNSA 120

Query: 337 ALTTPAQSRTEALGISLAAFSIALPYLGKYYIAVLRIYFFFHLLFLLTRKLPPTSVRVEK 396
           A TTPAQ RTEALG+SLAAFSIALPYLGK+                              
Sbjct: 121 APTTPAQLRTEALGLSLAAFSIALPYLGKF------------------------------ 180

Query: 397 KGAKKGRELEELETAVLSTATVPLSAVGQIPNANSIKYLSINIKSYSLCTCLAAAFCLIR 456
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 457 KSTHLCLQGAVPSGEATLPEGTEQIFLLSQIVLDDVKEDLAWATYILLRNTNSISVVSLR 516
                 L+GAVPSGEA+LPEGTEQIF+LSQ V D+VKEDLAWATYILLRNTNSISV    
Sbjct: 241 ------LKGAVPSGEASLPEGTEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISV---- 284

Query: 517 FLSLTYILLHKYVVREHGVFNKLHYLAFLDTLIQTQGALCVRGYWNSPNDKSGADLLAWF 576
                                          LIQ +G LCVRGYWNSPND  GADL+AWF
Sbjct: 301 -------------------------------LIQIRGELCVRGYWNSPNDICGADLVAWF 284

Query: 577 EEQLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPVVQNLKQSGNEMEKMGGFI 636
           EEQLQSIGLSAL D LYFPQIS+S LW+MLP GTRSVLVQPV    KQSGN+MEK+GGFI
Sbjct: 361 EEQLQSIGLSALNDDLYFPQISDSELWKMLPNGTRSVLVQPV----KQSGNKMEKIGGFI 284

Query: 637 LLASSLSYAFSDKDRAWIRALASKFGDRAIL 668
           LLASSLSYAFSDKDRAWIRALA+KF DR IL
Sbjct: 421 LLASSLSYAFSDKDRAWIRALANKFIDRDIL 284

[Close]

BLAST of CaUC05G088360 vs. TAIR 10
Match: AT5G52110.1 (Protein of unknown function (DUF2930) )

HSP 1 Score: 222.2 bits (565), Expect = 1.2e-57
Identity = 155/431 (35.96%), Postives = 204/431 (47.33%), Query Frame = 0


Query: 232 FALQFRAKSNTKAPAFSARLDDSKNSANQQLNLSVLRFTLGISLSLWKLVLSKGIDNLGI 291
           FALQ RA+ +T+  A +        +++QQLNLSVLRFT G                   
Sbjct: 14  FALQPRAQRSTRIFARTENDSPQSKTSDQQLNLSVLRFTFG------------------- 73

Query: 292 WEQVIFFSVTFRRIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQSRTEALGI 351
                        IPG DESYLPRWIGYGFGSLLLLNHF   +++A  + +Q R+EALG+
Sbjct: 74  -------------IPGFDESYLPRWIGYGFGSLLLLNHF---SASAPISESQMRSEALGL 133

Query: 352 SLAAFSIALPYLGKYYIAVLRIYFFFHLLFLLTRKLPPTSVRVEKKGAKKGRELEELETA 411
           SLAAFSIALPY+GK+                                             
Sbjct: 134 SLAAFSIALPYIGKF--------------------------------------------- 193

Query: 412 VLSTATVPLSAVGQIPNANSIKYLSINIKSYSLCTCLAAAFCLIRKSTHLCLQGAVPSGE 471
                                                              L+G+V   +
Sbjct: 194 ---------------------------------------------------LKGSVVE-Q 253

Query: 472 ATLPEGTEQIFLLSQIVLDDVKEDLAWATYILLRNTNSISVVSLRFLSLTYILLHKYVVR 531
            +LPE  EQ+F++S  + D +KEDLAWATY+LLRNT++I+V                   
Sbjct: 254 RSLPEEGEQVFVISSNIGDSLKEDLAWATYVLLRNTSTIAV------------------- 273

Query: 532 EHGVFNKLHYLAFLDTLIQTQGALCVRGYWNSPNDKSGADLLAWFEEQLQSIGLSALKDA 591
                           LI  QG LCVRGYWN P+  S A L  WF++++  IGL+ +K+ 
Sbjct: 314 ----------------LISVQGELCVRGYWNCPDQMSKAQLHDWFKKKVDEIGLADVKET 273

Query: 592 LYFPQISESGL-WQMLPEGTRSVLVQPVVQNLKQSGNEMEKMGGFILLASSLSYAFSDKD 651
           LYFPQ + S L   +LP+GTRS+ VQP+VQN     NE +K+ GF+L+AS+  YA+SDKD
Sbjct: 374 LYFPQYAGSALSLDILPDGTRSLFVQPLVQNT----NEPQKVNGFLLVASTAGYAYSDKD 273

Query: 652 RAWIRALASKF 662
           RAWI A+A KF
Sbjct: 434 RAWIGAMAEKF 273

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BLAST of CaUC05G088360 vs. TAIR 10
Match: AT5G52110.2 (Protein of unknown function (DUF2930) )

HSP 1 Score: 222.2 bits (565), Expect = 1.2e-57
Identity = 155/431 (35.96%), Postives = 204/431 (47.33%), Query Frame = 0


Query: 232 FALQFRAKSNTKAPAFSARLDDSKNSANQQLNLSVLRFTLGISLSLWKLVLSKGIDNLGI 291
           FALQ RA+ +T+  A +        +++QQLNLSVLRFT G                   
Sbjct: 14  FALQPRAQRSTRIFARTENDSPQSKTSDQQLNLSVLRFTFG------------------- 73

Query: 292 WEQVIFFSVTFRRIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQSRTEALGI 351
                        IPG DESYLPRWIGYGFGSLLLLNHF   +++A  + +Q R+EALG+
Sbjct: 74  -------------IPGFDESYLPRWIGYGFGSLLLLNHF---SASAPISESQMRSEALGL 133

Query: 352 SLAAFSIALPYLGKYYIAVLRIYFFFHLLFLLTRKLPPTSVRVEKKGAKKGRELEELETA 411
           SLAAFSIALPY+GK+                                             
Sbjct: 134 SLAAFSIALPYIGKF--------------------------------------------- 193

Query: 412 VLSTATVPLSAVGQIPNANSIKYLSINIKSYSLCTCLAAAFCLIRKSTHLCLQGAVPSGE 471
                                                              L+G+V   +
Sbjct: 194 ---------------------------------------------------LKGSVVE-Q 253

Query: 472 ATLPEGTEQIFLLSQIVLDDVKEDLAWATYILLRNTNSISVVSLRFLSLTYILLHKYVVR 531
            +LPE  EQ+F++S  + D +KEDLAWATY+LLRNT++I+V                   
Sbjct: 254 RSLPEEGEQVFVISSNIGDSLKEDLAWATYVLLRNTSTIAV------------------- 273

Query: 532 EHGVFNKLHYLAFLDTLIQTQGALCVRGYWNSPNDKSGADLLAWFEEQLQSIGLSALKDA 591
                           LI  QG LCVRGYWN P+  S A L  WF++++  IGL+ +K+ 
Sbjct: 314 ----------------LISVQGELCVRGYWNCPDQMSKAQLHDWFKKKVDEIGLADVKET 273

Query: 592 LYFPQISESGL-WQMLPEGTRSVLVQPVVQNLKQSGNEMEKMGGFILLASSLSYAFSDKD 651
           LYFPQ + S L   +LP+GTRS+ VQP+VQN     NE +K+ GF+L+AS+  YA+SDKD
Sbjct: 374 LYFPQYAGSALSLDILPDGTRSLFVQPLVQNT----NEPQKVNGFLLVASTAGYAYSDKD 273

Query: 652 RAWIRALASKF 662
           RAWI A+A KF
Sbjct: 434 RAWIGAMAEKF 273

The following BLAST results are available for this feature:

BLAST of CaUC05G088360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016899091.1	2.2e-122	59.65	PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic ...	[more]
XP_038884000.1	1.0e-119	58.76	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Benincasa ...	[more]
XP_004140790.1	1.4e-119	58.09	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X2 ...	[more]
XP_031738698.1	1.7e-117	57.21	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 ...	[more]
XP_023542853.1	1.1e-105	53.81	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita ...	[more]

BLAST of CaUC05G088360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJ81	1.7e-56	35.96	Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic OS=Arabidop...	[more]

BLAST of CaUC05G088360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DSW9	1.1e-122	59.65	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 ...	[more]
A0A5A7SUJ0	1.1e-122	59.65	Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2 OS=Cucumis melo var. makuw...	[more]
A0A0A0LBA9	6.6e-120	58.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G180340 PE=4 SV=1	[more]
A0A6J1G0N4	2.1e-105	53.59	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic OS=Cucurbit...	[more]
A0A6J1CJH9	7.8e-105	53.88	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 ...	[more]

BLAST of CaUC05G088360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52110.1	1.2e-57	35.96	Protein of unknown function (DUF2930)	[more]
AT5G52110.2	1.2e-57	35.96	Protein of unknown function (DUF2930)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021325	Cofactor assembly of complex C subunit B, CCB2/CCB4	PFAM	PF11152	CCB2_CCB4	coord: 313..365 e-value: 4.7E-12 score: 45.6 coord: 444..513 e-value: 4.9E-10 score: 39.0 coord: 549..661 e-value: 1.2E-19 score: 70.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..54
IPR044970	COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic	PANTHER	PTHR36403	PROTEIN COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, CHLOROPLASTIC	coord: 237..274 coord: 304..366 coord: 548..662 coord: 439..513

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC05G088360.1	CaUC05G088360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010190	cytochrome b6f complex assembly