CaUC05G088300 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC05G088300
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	LOB domain-containing protein
Location	Ciama_Chr05: 8764016 .. 8765267 (+)
RNA-Seq Expression	CaUC05G088300
Synteny	CaUC05G088300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTAGGAAAGAAGTATTGAAGGTACTACTTATCATTTTCTCCACAACTCAGTCTTGAATATGTAGAAGCCAACACTACTCGCTATATCTATCATTTTGCTCCATTCTTTGATCATAAAATTAAATACTTTAATTAGCGGTAAAAAATTTAAGAAATATGAAGCTTTATGTTTCCTTCAAGAATAGAAAATCATAATCATGGTGTAAATTTTTCAACAAAAATAATTTTTTAAAAAAATAACCGAGATGGTTTAGGAAAGATATATATTTAACCTAAATTGCTTGTTATTACCATATCCATATAATTACATAATTAAACATTTCCTTCTAAACCTTTAGCATTTGAAAAACTAGCCGTTATATCTTCTACTCTACACACTCTCCATTTCACCATCAAATGTATATATACACAAAAGATTTCCAGAATCTTCATCCAAATCTTCTTCTCTTATTTTCTTCCAAATTTTGTTCATCCAAATCTTCTTCTCAAATATTTTCTTTCTCAATTTAGGCGAGAGGCAATAAGATTTTTAGCATGATTTTGGGTCGTTGTGCAGCTTGTAAATATTTGAGAAGAAGATGCCCTACAGATTGCATTTTTTCCCCATTCTTTCCTTCCAATAATCCTCAAAGATTCACCATTGTTCATCGAATTTATGGTGCAAGTAATGTTGCTAAATTCCTTCATGTAAGTTTATATTTCATCTTCCCCCTACCTTTTTAATTCCTATATCATACAATATCTTTTCTTTCCATTATTTCCATGCCTTTTTTATTTACTATTTTATTCATAAACCTACCTCACCACGTTATTCAACTCTTTCAAACAACTTAATAATCTATTTTAATCTATTTAAAGTGATTTCTTAGTATTTAATTTACTTTATACCAAGTTCTTTTTAATAAGTATATATATAATACTTGGAGACTTAACATTCTTTTTTGACTAATTTAATCAGCAACTTCCTACACATCTAAGAGCTGAAGCAGCAGAAACTTTATTTTTTGAGGCAAAATGCAGAATCGAAGATCCAGTTTATGGATGTGTTGGAATTATTTCTCAATTACAACACCAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCGGGCTGAGATTGCTTGTCTGGCTTCCAATGTCCAAGAACCTCAACTCCAAGATTTTGTATTTGAGCCCATCCAAGGCCCAAATACTATTGGATTCTCTCAAATTGGGCTTTCAACTCCGGCCCATTTTTTAAATTCATAA

mRNA sequence

ATGGTTAGGAAAGAAGTATTGAAGGCGAGAGGCAATAAGATTTTTAGCATGATTTTGGGTCGTTGTGCAGCTTGTAAATATTTGAGAAGAAGATGCCCTACAGATTGCATTTTTTCCCCATTCTTTCCTTCCAATAATCCTCAAAGATTCACCATTGTTCATCGAATTTATGGTGCAAGTAATGTTGCTAAATTCCTTCATCAACTTCCTACACATCTAAGAGCTGAAGCAGCAGAAACTTTATTTTTTGAGGCAAAATGCAGAATCGAAGATCCAGTTTATGGATGTGTTGGAATTATTTCTCAATTACAACACCAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCGGGCTGAGATTGCTTGTCTGGCTTCCAATGTCCAAGAACCTCAACTCCAAGATTTTGTATTTGAGCCCATCCAAGGCCCAAATACTATTGGATTCTCTCAAATTGGGCTTTCAACTCCGGCCCATTTTTTAAATTCATAA

Coding sequence (CDS)

ATGGTTAGGAAAGAAGTATTGAAGGCGAGAGGCAATAAGATTTTTAGCATGATTTTGGGTCGTTGTGCAGCTTGTAAATATTTGAGAAGAAGATGCCCTACAGATTGCATTTTTTCCCCATTCTTTCCTTCCAATAATCCTCAAAGATTCACCATTGTTCATCGAATTTATGGTGCAAGTAATGTTGCTAAATTCCTTCATCAACTTCCTACACATCTAAGAGCTGAAGCAGCAGAAACTTTATTTTTTGAGGCAAAATGCAGAATCGAAGATCCAGTTTATGGATGTGTTGGAATTATTTCTCAATTACAACACCAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCGGGCTGAGATTGCTTGTCTGGCTTCCAATGTCCAAGAACCTCAACTCCAAGATTTTGTATTTGAGCCCATCCAAGGCCCAAATACTATTGGATTCTCTCAAATTGGGCTTTCAACTCCGGCCCATTTTTTAAATTCATAA

Protein sequence

MVRKEVLKARGNKIFSMILGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACLASNVQEPQLQDFVFEPIQGPNTIGFSQIGLSTPAHFLNS

Homology

[Close]

BLAST of CaUC05G088300 vs. NCBI nr
Match: XP_004140854.1 (LOB domain-containing protein 24 [Cucumis sativus] >KGN57342.1 hypothetical protein Csa_009713 [Cucumis sativus])

HSP 1 Score: 283.9 bits (725), Expect = 8.9e-73
Identity = 136/148 (91.89%), Postives = 141/148 (95.27%), Query Frame = 0


Query: 17  MILGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAE 76
           MI GRCAACKYLRRRCP+DCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAE
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAE 60

Query: 77  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACLASNVQE-PQLQD 136
           AAETL FEAKCRIEDPVYGCVGIISQLQH+LHVAETQLAKTRAEIAC+ASNVQE PQ QD
Sbjct: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKTRAEIACVASNVQEQPQPQD 120

Query: 137 FVFEPIQGPNTIGFSQIGLSTPAHFLNS 164
           F FEPIQGPN++GFSQIGLSTPAH  NS
Sbjct: 121 FAFEPIQGPNSVGFSQIGLSTPAHCFNS 148

[Close]

BLAST of CaUC05G088300 vs. NCBI nr
Match: XP_008439169.1 (PREDICTED: LOB domain-containing protein 24-like [Cucumis melo])

HSP 1 Score: 283.1 bits (723), Expect = 1.5e-72
Identity = 135/149 (90.60%), Postives = 141/149 (94.63%), Query Frame = 0


Query: 17  MILGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAE 76
           MI GRCAACKYLRRRCP+DCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLR E
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGE 60

Query: 77  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACLASNVQE--PQLQ 136
           AAETL FEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAC+ASNVQE  PQLQ
Sbjct: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACVASNVQEEQPQLQ 120

Query: 137 DFVFEPIQGPNTIGFSQIGLSTPAHFLNS 164
           DF F+PIQGPN++GFSQIGLS+PAH  NS
Sbjct: 121 DFAFQPIQGPNSVGFSQIGLSSPAHCFNS 149

[Close]

BLAST of CaUC05G088300 vs. NCBI nr
Match: XP_023522202.1 (LOB domain-containing protein 24-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 277.7 bits (709), Expect = 6.4e-71
Identity = 133/147 (90.48%), Postives = 137/147 (93.20%), Query Frame = 0


Query: 17  MILGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAE 76
           MI GRCAACKYLRRRCP+DCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLR E
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE 60

Query: 77  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACLASNVQEPQLQDF 136
           AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIA LASN+QE Q QDF
Sbjct: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPQDF 120

Query: 137 VFEPIQGPNTIGFSQIGLSTPAHFLNS 164
             +PIQGPNTIGFSQIGLSTPAH+ NS
Sbjct: 121 AVQPIQGPNTIGFSQIGLSTPAHWFNS 147

[Close]

BLAST of CaUC05G088300 vs. NCBI nr
Match: KAG7014789.1 (LOB domain-containing protein 24, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 277.3 bits (708), Expect = 8.3e-71
Identity = 132/147 (89.80%), Postives = 137/147 (93.20%), Query Frame = 0


Query: 17  MILGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAE 76
           MI GRCAACKYLRRRCP+DCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLR E
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPE 60

Query: 77  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACLASNVQEPQLQDF 136
           AAE+LFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIA LASN+QE QL DF
Sbjct: 61  AAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQLHDF 120

Query: 137 VFEPIQGPNTIGFSQIGLSTPAHFLNS 164
             +PIQGPNTIGFSQIGLSTPAH+ NS
Sbjct: 121 AVQPIQGPNTIGFSQIGLSTPAHWFNS 147

[Close]

BLAST of CaUC05G088300 vs. NCBI nr
Match: XP_022985104.1 (LOB domain-containing protein 24-like [Cucurbita maxima])

HSP 1 Score: 276.6 bits (706), Expect = 1.4e-70
Identity = 135/148 (91.22%), Postives = 138/148 (93.24%), Query Frame = 0


Query: 17  MILGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAE 76
           MI GRCAACKYLRRRCP+DCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLRAE
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRAE 60

Query: 77  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACLASNV-QEPQLQD 136
           AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIA LASN+ QE Q QD
Sbjct: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLHQEAQPQD 120

Query: 137 FVFEPIQGPNTIGFSQIGLSTPAHFLNS 164
           F  EPIQGPNTIGFSQIGLSTPAH+ NS
Sbjct: 121 FAVEPIQGPNTIGFSQIGLSTPAHWFNS 148

[Close]

BLAST of CaUC05G088300 vs. ExPASy Swiss-Prot
Match: P59467 (LOB domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN=LBD23 PE=1 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 3.9e-39
Identity = 72/117 (61.54%), Postives = 90/117 (76.92%), Query Frame = 0


Query: 21  RCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAET 80
           RCAACKYLRRRCP DC+FSP+FP N+PQ+F  VHRIYGA NV+K L QLP   RAEA E+
Sbjct: 5   RCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAEAVES 64

Query: 81  LFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACLASNVQEPQLQDFV 138
           L FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+AEIA   + + +  + DF+
Sbjct: 65  LCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQTKLSQTHISDFM 121

[Close]

BLAST of CaUC05G088300 vs. ExPASy Swiss-Prot
Match: P59468 (LOB domain-containing protein 24 OS=Arabidopsis thaliana OX=3702 GN=LBD24 PE=2 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 3.9e-39
Identity = 73/117 (62.39%), Postives = 90/117 (76.92%), Query Frame = 0


Query: 21  RCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAET 80
           RCAACKYLRRRCP DC+FSP+FP N+PQ+F  VHRIYGA NV+K L QLP   RAEA E+
Sbjct: 5   RCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAEAVES 64

Query: 81  LFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACLASNVQEPQLQDFV 138
           L FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+AEIA   + + + Q  DF+
Sbjct: 65  LCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQTKLSQTQNSDFM 121

[Close]

BLAST of CaUC05G088300 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 139.0 bits (349), Expect = 4.6e-32
Identity = 63/113 (55.75%), Postives = 82/113 (72.57%), Query Frame = 0


Query: 22  CAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETL 81
           CA+CK LRRRC  DCIF+P+FP ++P +F IVH+++GASNV+K L +LP H RA+A  +L
Sbjct: 9   CASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVNSL 68

Query: 82  FFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACLASNVQEPQLQ 135
            FEA  R+ DPVYGCVG IS LQ+Q+   + QLA  +AEI C+     EP LQ
Sbjct: 69  VFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ-NEPTLQ 120

[Close]

BLAST of CaUC05G088300 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.9e-30
Identity = 58/103 (56.31%), Postives = 75/103 (72.82%), Query Frame = 0


Query: 22  CAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETL 81
           CAACK LRRRC  DC+FSP+FP++ PQ+F  VHR++GASNV K L +LP H R +A  ++
Sbjct: 14  CAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVSSM 73

Query: 82  FFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACL 125
            +EA  R+ DPVYGCVG IS LQ Q+ V + QLA  +AE+  L
Sbjct: 74  VYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHL 116

[Close]

BLAST of CaUC05G088300 vs. ExPASy Swiss-Prot
Match: Q9FKZ3 (LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 3.1e-28
Identity = 52/101 (51.49%), Postives = 76/101 (75.25%), Query Frame = 0


Query: 22  CAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETL 81
           CAACK+LRR+C  +C+F+P+FP + PQ+F  VH+++GASNVAK L++L ++ R +A  +L
Sbjct: 8   CAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAVNSL 67

Query: 82  FFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIA 123
           F+EA+ R+ DPVYGCVG+IS LQH+L      L   + E+A
Sbjct: 68  FYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELA 108

[Close]

BLAST of CaUC05G088300 vs. ExPASy TrEMBL
Match: A0A0A0L9N7 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G180300 PE=3 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 4.3e-73
Identity = 136/148 (91.89%), Postives = 141/148 (95.27%), Query Frame = 0


Query: 17  MILGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAE 76
           MI GRCAACKYLRRRCP+DCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAE
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAE 60

Query: 77  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACLASNVQE-PQLQD 136
           AAETL FEAKCRIEDPVYGCVGIISQLQH+LHVAETQLAKTRAEIAC+ASNVQE PQ QD
Sbjct: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKTRAEIACVASNVQEQPQPQD 120

Query: 137 FVFEPIQGPNTIGFSQIGLSTPAHFLNS 164
           F FEPIQGPN++GFSQIGLSTPAH  NS
Sbjct: 121 FAFEPIQGPNSVGFSQIGLSTPAHCFNS 148

[Close]

BLAST of CaUC05G088300 vs. ExPASy TrEMBL
Match: A0A1S3AY36 (LOB domain-containing protein 24-like OS=Cucumis melo OX=3656 GN=LOC103484045 PE=3 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 7.3e-73
Identity = 135/149 (90.60%), Postives = 141/149 (94.63%), Query Frame = 0


Query: 17  MILGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAE 76
           MI GRCAACKYLRRRCP+DCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLR E
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGE 60

Query: 77  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACLASNVQE--PQLQ 136
           AAETL FEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAC+ASNVQE  PQLQ
Sbjct: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACVASNVQEEQPQLQ 120

Query: 137 DFVFEPIQGPNTIGFSQIGLSTPAHFLNS 164
           DF F+PIQGPN++GFSQIGLS+PAH  NS
Sbjct: 121 DFAFQPIQGPNSVGFSQIGLSSPAHCFNS 149

[Close]

BLAST of CaUC05G088300 vs. ExPASy TrEMBL
Match: A0A6J1JCD0 (LOB domain-containing protein 24-like OS=Cucurbita maxima OX=3661 GN=LOC111483182 PE=3 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 6.9e-71
Identity = 135/148 (91.22%), Postives = 138/148 (93.24%), Query Frame = 0


Query: 17  MILGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAE 76
           MI GRCAACKYLRRRCP+DCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLRAE
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRAE 60

Query: 77  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACLASNV-QEPQLQD 136
           AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIA LASN+ QE Q QD
Sbjct: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLHQEAQPQD 120

Query: 137 FVFEPIQGPNTIGFSQIGLSTPAHFLNS 164
           F  EPIQGPNTIGFSQIGLSTPAH+ NS
Sbjct: 121 FAVEPIQGPNTIGFSQIGLSTPAHWFNS 148

[Close]

BLAST of CaUC05G088300 vs. ExPASy TrEMBL
Match: A0A6J1E5I6 (LOB domain-containing protein 24-like OS=Cucurbita moschata OX=3662 GN=LOC111430896 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.8e-69
Identity = 130/147 (88.44%), Postives = 135/147 (91.84%), Query Frame = 0


Query: 17  MILGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAE 76
           MI GRCAACKYLRRRC +DCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLR E
Sbjct: 1   MISGRCAACKYLRRRCASDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE 60

Query: 77  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACLASNVQEPQLQDF 136
           AAE+LFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIA LASN+QE Q  DF
Sbjct: 61  AAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPHDF 120

Query: 137 VFEPIQGPNTIGFSQIGLSTPAHFLNS 164
             +PIQGPNTIGFSQIGLSTPAH+ NS
Sbjct: 121 AAQPIQGPNTIGFSQIGLSTPAHWFNS 147

[Close]

BLAST of CaUC05G088300 vs. ExPASy TrEMBL
Match: A0A0A0LLX6 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G373510 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 5.8e-54
Identity = 110/145 (75.86%), Postives = 121/145 (83.45%), Query Frame = 0


Query: 17  MILGRCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAE 76
           MI  RCAACKYLRRRC ++CIFSP+FPSNNPQRF IVHRIYGASNVAKFL Q+P  LR E
Sbjct: 1   MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGE 60

Query: 77  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACLASNVQEPQLQDF 136
           AAETL+FEAKCRIEDP+YGCVGIISQLQ++LHVAETQLAKTRAEIA LASN Q+ Q +DF
Sbjct: 61  AAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAEIALLASNRQQAQHEDF 120

Query: 137 VF-EPIQGPNTIGFSQIGLSTPAHF 161
            F +P  GP        GLSTPAHF
Sbjct: 121 PFDDPSSGP-----IFTGLSTPAHF 140

[Close]

BLAST of CaUC05G088300 vs. TAIR 10
Match: AT3G26620.1 (LOB domain-containing protein 23 )

HSP 1 Score: 162.5 bits (410), Expect = 2.8e-40
Identity = 72/117 (61.54%), Postives = 90/117 (76.92%), Query Frame = 0


Query: 21  RCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAET 80
           RCAACKYLRRRCP DC+FSP+FP N+PQ+F  VHRIYGA NV+K L QLP   RAEA E+
Sbjct: 5   RCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAEAVES 64

Query: 81  LFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACLASNVQEPQLQDFV 138
           L FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+AEIA   + + +  + DF+
Sbjct: 65  LCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQTKLSQTHISDFM 121

[Close]

BLAST of CaUC05G088300 vs. TAIR 10
Match: AT3G26660.1 (LOB domain-containing protein 24 )

HSP 1 Score: 162.5 bits (410), Expect = 2.8e-40
Identity = 73/117 (62.39%), Postives = 90/117 (76.92%), Query Frame = 0


Query: 21  RCAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAET 80
           RCAACKYLRRRCP DC+FSP+FP N+PQ+F  VHRIYGA NV+K L QLP   RAEA E+
Sbjct: 5   RCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAEAVES 64

Query: 81  LFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACLASNVQEPQLQDFV 138
           L FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+AEIA   + + + Q  DF+
Sbjct: 65  LCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQTKLSQTQNSDFM 121

[Close]

BLAST of CaUC05G088300 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 139.0 bits (349), Expect = 3.3e-33
Identity = 63/113 (55.75%), Postives = 82/113 (72.57%), Query Frame = 0


Query: 22  CAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETL 81
           CA+CK LRRRC  DCIF+P+FP ++P +F IVH+++GASNV+K L +LP H RA+A  +L
Sbjct: 9   CASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVNSL 68

Query: 82  FFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACLASNVQEPQLQ 135
            FEA  R+ DPVYGCVG IS LQ+Q+   + QLA  +AEI C+     EP LQ
Sbjct: 69  VFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ-NEPTLQ 120

[Close]

BLAST of CaUC05G088300 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 133.7 bits (335), Expect = 1.4e-31
Identity = 58/103 (56.31%), Postives = 75/103 (72.82%), Query Frame = 0


Query: 22  CAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETL 81
           CAACK LRRRC  DC+FSP+FP++ PQ+F  VHR++GASNV K L +LP H R +A  ++
Sbjct: 14  CAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVSSM 73

Query: 82  FFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACL 125
            +EA  R+ DPVYGCVG IS LQ Q+ V + QLA  +AE+  L
Sbjct: 74  VYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHL 116

[Close]

BLAST of CaUC05G088300 vs. TAIR 10
Match: AT5G66870.1 (ASYMMETRIC LEAVES 2-like 1 )

HSP 1 Score: 126.3 bits (316), Expect = 2.2e-29
Identity = 52/101 (51.49%), Postives = 76/101 (75.25%), Query Frame = 0


Query: 22  CAACKYLRRRCPTDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAEAAETL 81
           CAACK+LRR+C  +C+F+P+FP + PQ+F  VH+++GASNVAK L++L ++ R +A  +L
Sbjct: 8   CAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAVNSL 67

Query: 82  FFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIA 123
           F+EA+ R+ DPVYGCVG+IS LQH+L      L   + E+A
Sbjct: 68  FYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELA 108

The following BLAST results are available for this feature:

BLAST of CaUC05G088300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140854.1	8.9e-73	91.89	LOB domain-containing protein 24 [Cucumis sativus] >KGN57342.1 hypothetical prot...	[more]
XP_008439169.1	1.5e-72	90.60	PREDICTED: LOB domain-containing protein 24-like [Cucumis melo]	[more]
XP_023522202.1	6.4e-71	90.48	LOB domain-containing protein 24-like [Cucurbita pepo subsp. pepo]	[more]
KAG7014789.1	8.3e-71	89.80	LOB domain-containing protein 24, partial [Cucurbita argyrosperma subsp. argyros...	[more]
XP_022985104.1	1.4e-70	91.22	LOB domain-containing protein 24-like [Cucurbita maxima]	[more]

BLAST of CaUC05G088300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P59467	3.9e-39	61.54	LOB domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN=LBD23 PE=1 S...	[more]
P59468	3.9e-39	62.39	LOB domain-containing protein 24 OS=Arabidopsis thaliana OX=3702 GN=LBD24 PE=2 S...	[more]
Q8LBW3	4.6e-32	55.75	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]
Q9SHE9	1.9e-30	56.31	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]
Q9FKZ3	3.1e-28	51.49	LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 S...	[more]

BLAST of CaUC05G088300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9N7	4.3e-73	91.89	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G180300 PE=3 SV...	[more]
A0A1S3AY36	7.3e-73	90.60	LOB domain-containing protein 24-like OS=Cucumis melo OX=3656 GN=LOC103484045 PE...	[more]
A0A6J1JCD0	6.9e-71	91.22	LOB domain-containing protein 24-like OS=Cucurbita maxima OX=3661 GN=LOC11148318...	[more]
A0A6J1E5I6	3.8e-69	88.44	LOB domain-containing protein 24-like OS=Cucurbita moschata OX=3662 GN=LOC111430...	[more]
A0A0A0LLX6	5.8e-54	75.86	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G373510 PE=3 SV...	[more]

BLAST of CaUC05G088300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G26620.1	2.8e-40	61.54	LOB domain-containing protein 23	[more]
AT3G26660.1	2.8e-40	62.39	LOB domain-containing protein 24	[more]
AT2G30130.1	3.3e-33	55.75	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G31320.1	1.4e-31	56.31	LOB domain-containing protein 4	[more]
AT5G66870.1	2.2e-29	51.49	ASYMMETRIC LEAVES 2-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 100..120
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 17..132
None	No IPR available	PANTHER	PTHR31301:SF120	LOB DOMAIN-CONTAINING PROTEIN 23-RELATED	coord: 17..132
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 21..118 e-value: 3.2E-38 score: 130.3
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 20..121 score: 23.99954

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC05G088300.1	CaUC05G088300.1	mRNA