CaUC05G087210 (gene) Watermelon (USVL246-FR2) v1
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Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCTTGGAAGAAAACCATCATTTCTCCCTTTAGAAAGGCTTGCACCATCTTCAACCAAAACCCTCGAGATCCTAAAAAGTCTCATTCCGACTCAGGTTAGGTCTCAGTTGAAAAGTCATTTCAAACAACAAACTTTTTAATTTCTGAATAGAGTTTGTTTGATTATTGTTTTTGTTAATAATTGTAATTTTAAAAGTTAATTGACAATTGTGTTCTGTTTGTTTTTCAGAGCAAGAGAAGCGAGTGGATGTGAGGAATCTTCAAGGGGAGGTGATGGCGTGTGGGTATGAAGATGTGCACGTGATGTGGTCTATTTTAGACAAGGCCAATTCAACAGCCACTGCTACTGCCGCCACTTGTAATGTGTCTTCTTAACCACGGACGACTGACGTCGCTGCTGCTGCCGCCGTCGTCACCGGTTGCTTAATTGTTGTTGTACATAAACCCATCAATACCTCTCTTTCTCTGTGTTATTTTGGAGTTTGATGATTTTTGTTTATTTGTAGGGAATGAATCCCCATGATTTGAAGCTTTTAATCATGGTGAGATTTAAAAAGCTTTTTATTACTCTTAAATCTTAAATGGCTTCTTGGAAGAAAACCATCATTTCTCCCTTTAGAAAGGCTTGCACCATCTTCAACCAAAACCCTCGAGATCCTAAAAAGTCTCATTCCGACTCAGAGCAAGAGAAGCGAGTGGATGTGAGGAATCTTCAAGGGGAGCCACTGCTACTGCCGCCACTTGTAATGTGTCTTCTTAACCACGGACGACTGACGTCGCTGCTGCTGCCGCCGTCGTCACCGGGAATGAATCCCCATGATTTGAAGCTTTTAATCATGGTGAGATTTAAAAAGCTTTTTATTACTCTTAAATCTTAA ATGGCTTCTTGGAAGAAAACCATCATTTCTCCCTTTAGAAAGGCTTGCACCATCTTCAACCAAAACCCTCGAGATCCTAAAAAGTCTCATTCCGACTCAGAGCAAGAGAAGCGAGTGGATGTGAGGAATCTTCAAGGGGAGCCACTGCTACTGCCGCCACTTGTAATGTGTCTTCTTAACCACGGACGACTGACGTCGCTGCTGCTGCCGCCGTCGTCACCGGGAATGAATCCCCATGATTTGAAGCTTTTAATCATGGTGAGATTTAAAAAGCTTTTTATTACTCTTAAATCTTAA MASWKKTIISPFRKACTIFNQNPRDPKKSHSDSEQEKRVDVRNLQGEPLLLPPLVMCLLNHGRLTSLLLPPSSPGMNPHDLKLLIMVRFKKLFITLKS Homology
BLAST of CaUC05G087210 vs. NCBI nr
Match: XP_008439007.1 (PREDICTED: uncharacterized protein LOC103483930 isoform X3 [Cucumis melo] >KAA0052144.1 uncharacterized protein E6C27_scaffold1589G00140 [Cucumis melo var. makuwa] >TYK30595.1 uncharacterized protein E5676_scaffold60158G00010 [Cucumis melo var. makuwa]) HSP 1 Score: 100.9 bits (250), Expect = 6.4e-18 Identity = 47/47 (100.00%), Postives = 47/47 (100.00%), Query Frame = 0
BLAST of CaUC05G087210 vs. NCBI nr
Match: KAG7018537.1 (putative GTP diphosphokinase CRSH, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 99.4 bits (246), Expect = 1.9e-17 Identity = 55/87 (63.22%), Postives = 63/87 (72.41%), Query Frame = 0
BLAST of CaUC05G087210 vs. NCBI nr
Match: XP_038898749.1 (uncharacterized protein LOC120086267 [Benincasa hispida]) HSP 1 Score: 97.8 bits (242), Expect = 5.4e-17 Identity = 46/47 (97.87%), Postives = 46/47 (97.87%), Query Frame = 0
BLAST of CaUC05G087210 vs. NCBI nr
Match: XP_022138108.1 (uncharacterized protein LOC111009357 [Momordica charantia]) HSP 1 Score: 96.7 bits (239), Expect = 1.2e-16 Identity = 45/47 (95.74%), Postives = 46/47 (97.87%), Query Frame = 0
BLAST of CaUC05G087210 vs. NCBI nr
Match: XP_004147637.1 (uncharacterized protein LOC101206709 [Cucumis sativus] >KGN57215.1 hypothetical protein Csa_010169 [Cucumis sativus]) HSP 1 Score: 96.3 bits (238), Expect = 1.6e-16 Identity = 47/48 (97.92%), Postives = 47/48 (97.92%), Query Frame = 0
BLAST of CaUC05G087210 vs. ExPASy TrEMBL
Match: A0A5A7U9W0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold60158G00010 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 3.1e-18 Identity = 47/47 (100.00%), Postives = 47/47 (100.00%), Query Frame = 0
BLAST of CaUC05G087210 vs. ExPASy TrEMBL
Match: A0A1S3AXS6 (uncharacterized protein LOC103483930 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483930 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 3.1e-18 Identity = 47/47 (100.00%), Postives = 47/47 (100.00%), Query Frame = 0
BLAST of CaUC05G087210 vs. ExPASy TrEMBL
Match: A0A6J1CC51 (uncharacterized protein LOC111009357 OS=Momordica charantia OX=3673 GN=LOC111009357 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 5.8e-17 Identity = 45/47 (95.74%), Postives = 46/47 (97.87%), Query Frame = 0
BLAST of CaUC05G087210 vs. ExPASy TrEMBL
Match: A0A0A0L5H1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171230 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 7.6e-17 Identity = 47/48 (97.92%), Postives = 47/48 (97.92%), Query Frame = 0
BLAST of CaUC05G087210 vs. ExPASy TrEMBL
Match: A0A6J1IUX8 (uncharacterized protein LOC111479526 OS=Cucurbita maxima OX=3661 GN=LOC111479526 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.7e-16 Identity = 45/47 (95.74%), Postives = 46/47 (97.87%), Query Frame = 0
BLAST of CaUC05G087210 vs. TAIR 10
Match: AT3G17580.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48330.1); Has 40 Blast hits to 40 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 50.8 bits (120), Expect = 7.1e-07 Identity = 28/54 (51.85%), Postives = 35/54 (64.81%), Query Frame = 0
BLAST of CaUC05G087210 vs. TAIR 10
Match: AT1G48330.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17580.1); Has 40 Blast hits to 40 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 45.1 bits (105), Expect = 3.9e-05 Identity = 24/49 (48.98%), Postives = 34/49 (69.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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