CaUC05G084170 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC05G084170
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Alba domain-containing protein
Location	Ciama_Chr05: 4532030 .. 4533619 (-)
RNA-Seq Expression	CaUC05G084170
Synteny	CaUC05G084170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTATATTTTTCAATTTTAATTAAATACTCAAATTAATTTTCCATTGCTTTCATTTCTTGAGGGGCGGAGCAGTCACCGGGAAATGCAGTAACTGCCGGTGTACGGCTGTTAAACGAAACCGTTGAGACCTTAACCGCTCAAACGACTCCGTCGCAACAAACACTGCCGCCGCCAGTTCCGATTCTTCGCCTTCAAAATTCTTTATAAATTACTACTGCAGTTCGATTCCATTTTACCATAGTTCACAATTAGTAGTAGAATCTTTTCATTCCTTCTGCGCACTACTCTTTTAGCGACGCAGGAAGAGATCAGGCAATGGATTCCGGCATGGTCGTCTCAGAAGGCACCCCTGAGGTCAAGAATGAAATCCGCAATGAAGAGGAAAAGCTTCTCGTCCTTGCCCAAGATGGTGAGGTTAAGGAGATTACTGTTTTGACCGAATTCAAGAAGAAGAGGAATCAAATTCAGGTTTCCAATGTCAAGAAGCCGTTCTTTTACTACTACAATCTTTCTAAGGTATTCTTTCTCTTGCTACGTTAAGATCCTCTGTGTCTTACTGTTGAATCAACTTCTTTGTTAAGCTTCATTTTTGGAAAATCAAAACCTTGATTGATTTGATGTTTCATTTGTTGCAGAGGCATATTAAGCAGTACAATGAAGTTGAGCTTTCTGCATTAGGAATGGGTACGAGTTCTTGAATCCATTTCCTTTTTCATGATTGGTTTATAGTTTGATGGTCATAACTGCGCTAAGTTTCATTCATTCATCATACAGCTATACCTACTGTGGTGACGATCGCCGAGATTCTGAAGAAGAATGGATTGGCATTTCAAAAGAGTATGAAAATTTATCGAACCCATTGACCAGTTTAGTTTTTCTTTGGGAATAAGCCACTCTCTAAACATGATCTATTATTTGGAAATTTATGCAGACTTGACGATATCTTCTGTCAGTTTGAAGAATGGGGAAAGTGACAAGCTTGTTATGAAACCTAAGGTTACTGCTTACTACTAATGAAAGTATGTCTGGTTGTTGTGCAATTTTTGGATGTTTCGTTGGCTTAATGATGTATTCTTTCATCTTTTTTGCTAGATTGAGATAGTACTGGTAAATGCAGAAAAGATCAAGAAAATTTCGACTGCTCCAACAAGTGAAGAATCTTAATACAAGTTTTGTTAGTAGTGTAGTACCATTCTCGGATCTGGCTTTTCTTCTTGTTTGCCTATTTTGTCCAGAGTTTCTATAAGAGATTAGAGATTTGCTAGGGAATAGGCGAGTTGCAGATCTTTTAGTCGAATGAGATTCAATCCTGATAGAACCTAAGGAGAAGAGCTCCTCTTTTTTTCTCACAAAGAGGTTCTTAAGGATTGGATGTAGGAGAAGCTTTCTTTGTAATTGAACTACCAACTTCTAATTGCATACGAAATTGGATAAACAGACTGATCCCTTGTCTCTCTCTCTCTCTTGCACTTACACACACACACTAATCATCTAATTCTGGCGTCCATATGCACATTCAGTAATGGGAGAAAGATCCAAACTTTATTGTAAACTAATTCACAAGGAAAAAGGCTCCAATATATGAAGAAC

mRNA sequence

CTATATTTTTCAATTTTAATTAAATACTCAAATTAATTTTCCATTGCTTTCATTTCTTGAGGGGCGGAGCAGTCACCGGGAAATGCAGTAACTGCCGGTGTACGGCTGTTAAACGAAACCGTTGAGACCTTAACCGCTCAAACGACTCCGTCGCAACAAACACTGCCGCCGCCAGTTCCGATTCTTCGCCTTCAAAATTCTTTATAAATTACTACTGCAGTTCGATTCCATTTTACCATAGTTCACAATTAGTAGTAGAATCTTTTCATTCCTTCTGCGCACTACTCTTTTAGCGACGCAGGAAGAGATCAGGCAATGGATTCCGGCATGGTCGTCTCAGAAGGCACCCCTGAGGTCAAGAATGAAATCCGCAATGAAGAGGAAAAGCTTCTCGTCCTTGCCCAAGATGGTGAGGTTAAGGAGATTACTGTTTTGACCGAATTCAAGAAGAAGAGGAATCAAATTCAGGTTTCCAATGTCAAGAAGCCGTTCTTTTACTACTACAATCTTTCTAAGAGGCATATTAAGCAGTACAATGAAGTTGAGCTTTCTGCATTAGGAATGGCTATACCTACTGTGGTGACGATCGCCGAGATTCTGAAGAAGAATGGATTGGCATTTCAAAAGAACTTGACGATATCTTCTGTCAGTTTGAAGAATGGGGAAAGTGACAAGCTTGTTATGAAACCTAAGATTGAGATAGTACTGGTAAATGCAGAAAAGATCAAGAAAATTTCGACTGCTCCAACAAGTGAAGAATCTTAATACAAGTTTTGTTAGTAGTGTAGTACCATTCTCGGATCTGGCTTTTCTTCTTGTTTGCCTATTTTGTCCAGAGTTTCTATAAGAGATTAGAGATTTGCTAGGGAATAGGCGAGTTGCAGATCTTTTAGTCGAATGAGATTCAATCCTGATAGAACCTAAGGAGAAGAGCTCCTCTTTTTTTCTCACAAAGAGGTTCTTAAGGATTGGATGTAGGAGAAGCTTTCTTTGTAATTGAACTACCAACTTCTAATTGCATACGAAATTGGATAAACAGACTGATCCCTTGTCTCTCTCTCTCTCTTGCACTTACACACACACACTAATCATCTAATTCTGGCGTCCATATGCACATTCAGTAATGGGAGAAAGATCCAAACTTTATTGTAAACTAATTCACAAGGAAAAAGGCTCCAATATATGAAGAAC

Coding sequence (CDS)

ATGGATTCCGGCATGGTCGTCTCAGAAGGCACCCCTGAGGTCAAGAATGAAATCCGCAATGAAGAGGAAAAGCTTCTCGTCCTTGCCCAAGATGGTGAGGTTAAGGAGATTACTGTTTTGACCGAATTCAAGAAGAAGAGGAATCAAATTCAGGTTTCCAATGTCAAGAAGCCGTTCTTTTACTACTACAATCTTTCTAAGAGGCATATTAAGCAGTACAATGAAGTTGAGCTTTCTGCATTAGGAATGGCTATACCTACTGTGGTGACGATCGCCGAGATTCTGAAGAAGAATGGATTGGCATTTCAAAAGAACTTGACGATATCTTCTGTCAGTTTGAAGAATGGGGAAAGTGACAAGCTTGTTATGAAACCTAAGATTGAGATAGTACTGGTAAATGCAGAAAAGATCAAGAAAATTTCGACTGCTCCAACAAGTGAAGAATCTTAA

Protein sequence

MDSGMVVSEGTPEVKNEIRNEEEKLLVLAQDGEVKEITVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKNLTISSVSLKNGESDKLVMKPKIEIVLVNAEKIKKISTAPTSEES

Homology

[Close]

BLAST of CaUC05G084170 vs. NCBI nr
Match: XP_038877187.1 (uncharacterized protein At2g34160-like [Benincasa hispida])

HSP 1 Score: 257.7 bits (657), Expect = 6.2e-65
Identity = 137/149 (91.95%), Postives = 143/149 (95.97%), Query Frame = 0


Query: 1   MDSGMVVSEGTPEVKNEIRNEEEKLLVLAQDGEVKEITVLTEFKKKRNQIQVSNVKKPFF 60
           M+SGMVVSEGTPEVKNEIR+EEEKLLV+A DGEVKEI VLTEFKKKRNQIQVSNVKKPFF
Sbjct: 1   MESGMVVSEGTPEVKNEIRSEEEKLLVVANDGEVKEIAVLTEFKKKRNQIQVSNVKKPFF 60

Query: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKNLTISSVSLKNGESDK 120
           YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILK+NGLAFQK LTISSVSLK GE+DK
Sbjct: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKTLTISSVSLKKGENDK 120

Query: 121 LVMKPKIEIVLVNAEKIKKISTAPTSEES 150
           LVMKPKIEI LVNAEKIK ISTAPTSE+S
Sbjct: 121 LVMKPKIEIALVNAEKIKNISTAPTSEDS 149

[Close]

BLAST of CaUC05G084170 vs. NCBI nr
Match: XP_008438573.1 (PREDICTED: uncharacterized protein At2g34160-like [Cucumis melo] >KAA0049297.1 alba DNA/RNA-binding protein [Cucumis melo var. makuwa] >TYK17261.1 alba DNA/RNA-binding protein [Cucumis melo var. makuwa])

HSP 1 Score: 253.4 bits (646), Expect = 1.2e-63
Identity = 136/149 (91.28%), Postives = 140/149 (93.96%), Query Frame = 0


Query: 1   MDSGMVVSEGTPEVKNEIRNEEEKLLVLAQDGEVKEITVLTEFKKKRNQIQVSNVKKPFF 60
           MDSG VVSE TPEVKNEI+NEEEKLLV A D EVKEI VLTEFKKKRNQIQVSNVKKPFF
Sbjct: 1   MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF 60

Query: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKNLTISSVSLKNGESDK 120
           YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILK+NGLAFQKNLTISSVSLKNGE+ K
Sbjct: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKNLTISSVSLKNGENGK 120

Query: 121 LVMKPKIEIVLVNAEKIKKISTAPTSEES 150
           LVMKPKIEI LVNAEKIK ISTAPTSE+S
Sbjct: 121 LVMKPKIEIALVNAEKIKNISTAPTSEDS 149

[Close]

BLAST of CaUC05G084170 vs. NCBI nr
Match: XP_004134424.1 (uncharacterized protein At2g34160 [Cucumis sativus] >KGN56907.1 hypothetical protein Csa_011451 [Cucumis sativus])

HSP 1 Score: 249.6 bits (636), Expect = 1.7e-62
Identity = 134/149 (89.93%), Postives = 138/149 (92.62%), Query Frame = 0


Query: 1   MDSGMVVSEGTPEVKNEIRNEEEKLLVLAQDGEVKEITVLTEFKKKRNQIQVSNVKKPFF 60
           MDSGMVVSE  PEVKNEIRNEEE+LLV A D EVKEI VLTEFKKKRNQIQVSNVKKPFF
Sbjct: 1   MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF 60

Query: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKNLTISSVSLKNGESDK 120
           YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILK+NGLAFQK L ISSVSLKNGE+ K
Sbjct: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLMISSVSLKNGENGK 120

Query: 121 LVMKPKIEIVLVNAEKIKKISTAPTSEES 150
           LVMKPKIEI LVNAEKIK ISTAPTSE+S
Sbjct: 121 LVMKPKIEIALVNAEKIKNISTAPTSEDS 149

[Close]

BLAST of CaUC05G084170 vs. NCBI nr
Match: XP_022924600.1 (uncharacterized protein At2g34160-like [Cucurbita moschata] >XP_023528324.1 uncharacterized protein At2g34160-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 244.6 bits (623), Expect = 5.5e-61
Identity = 131/149 (87.92%), Postives = 140/149 (93.96%), Query Frame = 0


Query: 1   MDSGMVVSEGTPEVKNEIRNEEEKLLVLAQDGEVKEITVLTEFKKKRNQIQVSNVKKPFF 60
           M+SGMVVSE   E+KNEIRNEEEKLLV+A DGEVKEI VLTE KKKRNQIQVSNVKKPFF
Sbjct: 1   MESGMVVSEAISELKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFF 60

Query: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKNLTISSVSLKNGESDK 120
           YYYNLSKR+IKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQK LTISSVSLKNGE+D+
Sbjct: 61  YYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKYLTISSVSLKNGENDR 120

Query: 121 LVMKPKIEIVLVNAEKIKKISTAPTSEES 150
           LVMKPKIEI L+NAEK+KKISTA TSE+S
Sbjct: 121 LVMKPKIEIALINAEKMKKISTATTSEDS 149

[Close]

BLAST of CaUC05G084170 vs. NCBI nr
Match: XP_022980835.1 (uncharacterized protein At2g34160-like [Cucurbita maxima])

HSP 1 Score: 244.6 bits (623), Expect = 5.5e-61
Identity = 132/149 (88.59%), Postives = 140/149 (93.96%), Query Frame = 0


Query: 1   MDSGMVVSEGTPEVKNEIRNEEEKLLVLAQDGEVKEITVLTEFKKKRNQIQVSNVKKPFF 60
           M+SGMVVSE T EVKNEIRNEEEKLLV+A D EVKEI VLTE KKKRNQIQVSNVKKPFF
Sbjct: 1   MESGMVVSEATSEVKNEIRNEEEKLLVVAPDVEVKEIAVLTEIKKKRNQIQVSNVKKPFF 60

Query: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKNLTISSVSLKNGESDK 120
           YYYNLSKR+IKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQK LTISSVSLKNGE+D+
Sbjct: 61  YYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKYLTISSVSLKNGENDR 120

Query: 121 LVMKPKIEIVLVNAEKIKKISTAPTSEES 150
           LVMKPKIEI L+NAEK+KKISTA TSE+S
Sbjct: 121 LVMKPKIEIALINAEKMKKISTATTSEDS 149

[Close]

BLAST of CaUC05G084170 vs. ExPASy Swiss-Prot
Match: O22969 (Uncharacterized protein At2g34160 OS=Arabidopsis thaliana OX=3702 GN=At2g34160 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 6.1e-23
Identity = 59/115 (51.30%), Postives = 81/115 (70.43%), Query Frame = 0


Query: 34  VKEITVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAE 93
           V  + + T+ +KK N+IQVSN KKP F+Y NL+KR+++QYN+VELSALGMAI TVVT+ E
Sbjct: 8   VNNMNLATDSQKK-NRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIATVVTVTE 67

Query: 94  ILKKNGLAFQKNLTISSVSLKNGESDKLVMKPKIEIVLVNAEKIKKISTAPTSEE 149
           ILK NG A +K +  S+V +K+    + V K KIEI LV +EK  ++  A   E+
Sbjct: 68  ILKNNGFAVEKKIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFDELMAAANEEK 121

[Close]

BLAST of CaUC05G084170 vs. ExPASy TrEMBL
Match: A0A5D3CZ81 (Alba DNA/RNA-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001140 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 5.7e-64
Identity = 136/149 (91.28%), Postives = 140/149 (93.96%), Query Frame = 0


Query: 1   MDSGMVVSEGTPEVKNEIRNEEEKLLVLAQDGEVKEITVLTEFKKKRNQIQVSNVKKPFF 60
           MDSG VVSE TPEVKNEI+NEEEKLLV A D EVKEI VLTEFKKKRNQIQVSNVKKPFF
Sbjct: 1   MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF 60

Query: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKNLTISSVSLKNGESDK 120
           YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILK+NGLAFQKNLTISSVSLKNGE+ K
Sbjct: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKNLTISSVSLKNGENGK 120

Query: 121 LVMKPKIEIVLVNAEKIKKISTAPTSEES 150
           LVMKPKIEI LVNAEKIK ISTAPTSE+S
Sbjct: 121 LVMKPKIEIALVNAEKIKNISTAPTSEDS 149

[Close]

BLAST of CaUC05G084170 vs. ExPASy TrEMBL
Match: A0A1S3AXD3 (uncharacterized protein At2g34160-like OS=Cucumis melo OX=3656 GN=LOC103483640 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 5.7e-64
Identity = 136/149 (91.28%), Postives = 140/149 (93.96%), Query Frame = 0


Query: 1   MDSGMVVSEGTPEVKNEIRNEEEKLLVLAQDGEVKEITVLTEFKKKRNQIQVSNVKKPFF 60
           MDSG VVSE TPEVKNEI+NEEEKLLV A D EVKEI VLTEFKKKRNQIQVSNVKKPFF
Sbjct: 1   MDSGTVVSEATPEVKNEIQNEEEKLLVTAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF 60

Query: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKNLTISSVSLKNGESDK 120
           YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILK+NGLAFQKNLTISSVSLKNGE+ K
Sbjct: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKNLTISSVSLKNGENGK 120

Query: 121 LVMKPKIEIVLVNAEKIKKISTAPTSEES 150
           LVMKPKIEI LVNAEKIK ISTAPTSE+S
Sbjct: 121 LVMKPKIEIALVNAEKIKNISTAPTSEDS 149

[Close]

BLAST of CaUC05G084170 vs. ExPASy TrEMBL
Match: A0A0A0L8F8 (Alba domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G142990 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 8.2e-63
Identity = 134/149 (89.93%), Postives = 138/149 (92.62%), Query Frame = 0


Query: 1   MDSGMVVSEGTPEVKNEIRNEEEKLLVLAQDGEVKEITVLTEFKKKRNQIQVSNVKKPFF 60
           MDSGMVVSE  PEVKNEIRNEEE+LLV A D EVKEI VLTEFKKKRNQIQVSNVKKPFF
Sbjct: 1   MDSGMVVSEAAPEVKNEIRNEEERLLVAAPDSEVKEIAVLTEFKKKRNQIQVSNVKKPFF 60

Query: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKNLTISSVSLKNGESDK 120
           YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILK+NGLAFQK L ISSVSLKNGE+ K
Sbjct: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKRNGLAFQKKLMISSVSLKNGENGK 120

Query: 121 LVMKPKIEIVLVNAEKIKKISTAPTSEES 150
           LVMKPKIEI LVNAEKIK ISTAPTSE+S
Sbjct: 121 LVMKPKIEIALVNAEKIKNISTAPTSEDS 149

[Close]

BLAST of CaUC05G084170 vs. ExPASy TrEMBL
Match: A0A6J1IXN8 (uncharacterized protein At2g34160-like OS=Cucurbita maxima OX=3661 GN=LOC111480105 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 2.6e-61
Identity = 132/149 (88.59%), Postives = 140/149 (93.96%), Query Frame = 0


Query: 1   MDSGMVVSEGTPEVKNEIRNEEEKLLVLAQDGEVKEITVLTEFKKKRNQIQVSNVKKPFF 60
           M+SGMVVSE T EVKNEIRNEEEKLLV+A D EVKEI VLTE KKKRNQIQVSNVKKPFF
Sbjct: 1   MESGMVVSEATSEVKNEIRNEEEKLLVVAPDVEVKEIAVLTEIKKKRNQIQVSNVKKPFF 60

Query: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKNLTISSVSLKNGESDK 120
           YYYNLSKR+IKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQK LTISSVSLKNGE+D+
Sbjct: 61  YYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKYLTISSVSLKNGENDR 120

Query: 121 LVMKPKIEIVLVNAEKIKKISTAPTSEES 150
           LVMKPKIEI L+NAEK+KKISTA TSE+S
Sbjct: 121 LVMKPKIEIALINAEKMKKISTATTSEDS 149

[Close]

BLAST of CaUC05G084170 vs. ExPASy TrEMBL
Match: A0A6J1EFH1 (uncharacterized protein At2g34160-like OS=Cucurbita moschata OX=3662 GN=LOC111432040 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 2.6e-61
Identity = 131/149 (87.92%), Postives = 140/149 (93.96%), Query Frame = 0


Query: 1   MDSGMVVSEGTPEVKNEIRNEEEKLLVLAQDGEVKEITVLTEFKKKRNQIQVSNVKKPFF 60
           M+SGMVVSE   E+KNEIRNEEEKLLV+A DGEVKEI VLTE KKKRNQIQVSNVKKPFF
Sbjct: 1   MESGMVVSEAISELKNEIRNEEEKLLVVAPDGEVKEIAVLTEIKKKRNQIQVSNVKKPFF 60

Query: 61  YYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKNLTISSVSLKNGESDK 120
           YYYNLSKR+IKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQK LTISSVSLKNGE+D+
Sbjct: 61  YYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKYLTISSVSLKNGENDR 120

Query: 121 LVMKPKIEIVLVNAEKIKKISTAPTSEES 150
           LVMKPKIEI L+NAEK+KKISTA TSE+S
Sbjct: 121 LVMKPKIEIALINAEKMKKISTATTSEDS 149

[Close]

BLAST of CaUC05G084170 vs. TAIR 10
Match: AT3G04620.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 110.2 bits (274), Expect = 1.5e-24
Identity = 67/130 (51.54%), Postives = 88/130 (67.69%), Query Frame = 0


Query: 23  EKLLVLAQDGEVKEITVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALG 82
           E+ +VLA        TV T    K+N+IQVSN KKP F+Y NL+KR+I+Q+NEVELSALG
Sbjct: 16  ERNIVLAPATTTTTATVETH---KKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALG 75

Query: 83  MAIPTVVTIAEILKKNGLAFQKNLTISSVSLKNGESDKLVMKPKIEIVLVNAEK----IK 142
           MAI TVVTI+EILK NGLA +K +  S+V +K+    K+V K KIEIVL  ++K    + 
Sbjct: 76  MAITTVVTISEILKNNGLATEKKVLTSTVGMKDETKGKMVQKAKIEIVLGKSDKFDSLVP 135

Query: 143 KISTAPTSEE 149
            ++   T EE
Sbjct: 136 PVTNGKTPEE 142

[Close]

BLAST of CaUC05G084170 vs. TAIR 10
Match: AT2G34160.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 108.6 bits (270), Expect = 4.4e-24
Identity = 59/115 (51.30%), Postives = 81/115 (70.43%), Query Frame = 0


Query: 34  VKEITVLTEFKKKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAE 93
           V  + + T+ +KK N+IQVSN KKP F+Y NL+KR+++QYN+VELSALGMAI TVVT+ E
Sbjct: 8   VNNMNLATDSQKK-NRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIATVVTVTE 67

Query: 94  ILKKNGLAFQKNLTISSVSLKNGESDKLVMKPKIEIVLVNAEKIKKISTAPTSEE 149
           ILK NG A +K +  S+V +K+    + V K KIEI LV +EK  ++  A   E+
Sbjct: 68  ILKNNGFAVEKKIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFDELMAAANEEK 121

[Close]

BLAST of CaUC05G084170 vs. TAIR 10
Match: AT1G29250.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 107.1 bits (266), Expect = 1.3e-23
Identity = 55/104 (52.88%), Postives = 75/104 (72.12%), Query Frame = 0


Query: 45  KKRNQIQVSNVKKPFFYYYNLSKRHIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQK 104
           +K+N+IQVSN KKP F+Y NL+KR+++QY +VELSALGMAI TVVT+AEILK NG A +K
Sbjct: 18  QKKNRIQVSNTKKPLFFYVNLAKRYMQQYTDVELSALGMAIATVVTVAEILKNNGFAVEK 77

Query: 105 NLTISSVSLKNGESDKLVMKPKIEIVLVNAEKIKKISTAPTSEE 149
            +  S+V +K+    + V K KIEI L  +EK  ++  A   E+
Sbjct: 78  KIMTSTVDIKDDSRGRPVQKAKIEITLAKSEKFDELMAAANEEK 121

The following BLAST results are available for this feature:

BLAST of CaUC05G084170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877187.1	6.2e-65	91.95	uncharacterized protein At2g34160-like [Benincasa hispida]	[more]
XP_008438573.1	1.2e-63	91.28	PREDICTED: uncharacterized protein At2g34160-like [Cucumis melo] >KAA0049297.1 a...	[more]
XP_004134424.1	1.7e-62	89.93	uncharacterized protein At2g34160 [Cucumis sativus] >KGN56907.1 hypothetical pro...	[more]
XP_022924600.1	5.5e-61	87.92	uncharacterized protein At2g34160-like [Cucurbita moschata] >XP_023528324.1 unch...	[more]
XP_022980835.1	5.5e-61	88.59	uncharacterized protein At2g34160-like [Cucurbita maxima]	[more]

BLAST of CaUC05G084170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22969	6.1e-23	51.30	Uncharacterized protein At2g34160 OS=Arabidopsis thaliana OX=3702 GN=At2g34160 P...	[more]

BLAST of CaUC05G084170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CZ81	5.7e-64	91.28	Alba DNA/RNA-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3AXD3	5.7e-64	91.28	uncharacterized protein At2g34160-like OS=Cucumis melo OX=3656 GN=LOC103483640 P...	[more]
A0A0A0L8F8	8.2e-63	89.93	Alba domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G142990 PE=4 S...	[more]
A0A6J1IXN8	2.6e-61	88.59	uncharacterized protein At2g34160-like OS=Cucurbita maxima OX=3661 GN=LOC1114801...	[more]
A0A6J1EFH1	2.6e-61	87.92	uncharacterized protein At2g34160-like OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]

BLAST of CaUC05G084170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04620.1	1.5e-24	51.54	Alba DNA/RNA-binding protein	[more]
AT2G34160.1	4.4e-24	51.30	Alba DNA/RNA-binding protein	[more]
AT1G29250.1	1.3e-23	52.88	Alba DNA/RNA-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002775	DNA/RNA-binding protein Alba-like	PFAM	PF01918	Alba	coord: 48..105 e-value: 1.1E-10 score: 41.2
IPR036882	Alba-like domain superfamily	GENE3D	3.30.110.20		coord: 46..149 e-value: 5.9E-36 score: 124.9
IPR036882	Alba-like domain superfamily	SUPERFAMILY	82704	AlbA-like	coord: 48..136
IPR014560	Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related	PANTHER	PTHR31947	DNA/RNA-BINDING PROTEIN ALBA 3	coord: 13..146
None	No IPR available	PANTHER	PTHR31947:SF19	ALBA DNA/RNA-BINDING PROTEIN	coord: 13..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC05G084170.1	CaUC05G084170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding