CaUC05G083350 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC05G083350
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Pre-mRNA-processing factor 19
Location	Ciama_Chr05: 3868519 .. 3879639 (-)
RNA-Seq Expression	CaUC05G083350
Synteny	CaUC05G083350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTGGGTCGAATTCCAAGATCGTACAATAAATCCGGCCCATCGAACCAAGCTTTTGAAAACCCCTAGTATCAGTTTACGGACTCTCTTCTTCCCCGATCTCTCCTTCCATCTCCGCTTCGTCTCGTGCTGCCGGTTGCTGACTGCCCCAACGTTGCCGTCCGCTGTCGGGGAAAATCGTGCTCTGCTGCTACTGCACTCGTAAACCGTACCTCTCCGCCAAAATGAACTGCTCCAGTAAGTCTCCCGTTTCTCATTCCTGGTAATTCCTTCTGCTGTTCCTTTCATTTTGTGGTGATCTCTGTTATTGATATCTTGTGTTGCTCTGCAGTCTCCGGTGAGATTCCGGAAGAGCCAGTTGTCTCCAAGAATTCTGGATTACTCTTCGAGAAGCGCTTAATCGAGAGGCACATTTTGGTATGCTTGCTTTTTCTCTCCCCTCCCACTTGATTCTTTTCTCCATGTTTTTTAGGGCTTTTTCCCTGCGTTTCTGTTTCACCCTGCGTAATGTAAAGCGGTTTTTCTGTTCAGTTCTTTATGCGTGCATTTCTCGTCTTCCTTTGGCTGAATTATATTCCCTGGAACTATGGGGTCCAAGGGCTTCTTTACCCTTTGTTTCCTTTATTTTTTAAAAATTACGATATTTTATTCGAGGTGATTTCCCGCTGCTGCGGATTCTGAAACTTAGAGCCAGTTCAGTTTGTTTTTCCATAGTCGGAATATGTTAAAAATTAATACGCACTTCCATTTTATTTTTCATTTTTAAAAATTTTAAATCTTATCATGTCAAAGGACCAACTTTTTTCCTTGTCAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAAAAAAAAAAAAAAAAGGGACCAATTTTTAAGCGTGCATTTCATACTTGTCGTACGTTTTTTGCGTTCTTTTCCAACTTTTTCCGGAAGGGAGTTAAGCAGAACTTTGTTTTTGTTGCATGGATCTGCAACTTATTGGTTGAGCTTCATTTCAATGGTTTTATCCGTTTCCCTTTCCTGCCTTGTTGACAAACATATTTTTACTAGAACGATAATTCTATGATCAAGCAAGTTTTCTGATAATCTCGTGGATATTTGTACTTTGAATTTTGTGAGTGGTAGCATAGAGGCATCAAGAGAGAATTCTTTAGAGATTTCATATTTCTTCTCATTGAGAAAAAAACACTTAAGTCCCATTCGATAACCATTTGGTTTTTGAAAATTAAACTTATAAACACTATTTATACCCATTGATCTCTTTATTTTGTTATCTACGTTTTCAAAACCCAAACCAAAATTTAAAAACTCAAAAAAGTAGTTTGTAAAGACTTGTTATTTTTTTTTAATTTTTTATTTTGGTTAGGAGTTCGAATGTTTACTTAGAAAAGACGAAAGCCATAAAACCATGGTATAAATTGTTAGAAAATGAACATAATTTTAAAAAATCAAAAGCCAAATGGCTATCGAATTGGACCTTAATTCTTGCATTTTGGTTATTACTTATTAGTAAATACTTATATTTTAGTCTTATTAGTAAATGGTTATTTCTTAGTTATTGCATTTTGGTTATTACTAATTAGTAAATACTTATATTTTAGTCTTAATTAGAATTAGATAAATCTGATATGGTGAAGATGCAAGTAATGGAAAAAAGAAGGGTAGTGATTTTACATGAATTATTCTAACTTCTAAACGTGTAAAATGGATCCTTCTCTGTCTGATATCATTTTGAGGTTTGGCCAAATAAATTTATTTCATACAGTATAAATTGTTTAATGAATTATTTTTGGTGCTTTTCTTTGCTCCAATCTAATACAGCCTTGAGTTTTGAGGGATTTACTCCAAGGGATTTTAATTTGAAAATTTGCAACTTTTTCTTGGTTTTGTTGCAATATGTTTAAAATTATTTTTCAACGAAATATTTTTGCGTTTGATTAGTGTAAATTGTTTGTATTGCATCTCCAGGACTATGGGAAATGCCCTGTTACAGGTGAACCGCTTTCCATTGATGACATTGTTCCAATTAAAACCGGAAAGGTATGGCTAATTCTATTTAGTTCAGTTCTAAATATTGTGGGCCTTTTTGATTTCTCTGTAAGACAGGCATGTAAAATGTTATTGTTAGTGTAGATTTGGAGAATCAGTGTCTGAATTGGAATGTCAAGTGGTCTGTAATCTACCTAGCTCTATTTGATGAAGTTGAAAAGTGCAGGGTTTAAATGCTAGAAACATCAGATGGCCTAATAATACATATTCCTTCTGAATGTCTTTGTTTTCTAATTTTTTTTTTTAAAAAAAAAATCCAATTCTCCTTCTTTAAGTTCACTCTTGTTCTTTAATTTTTCTGCAGATAGTCAAGCCCAGGCAAGCTGCTAGCATCCCTGGAATGCTTGGAATGTTCCAGAATGTATGAAATTATTTTGTCTCTGTAGTTGTCCATTTGATGGTGCTTTGATGCTCTTGCGCTCCTGGAAGATTCAACATTCTTCATTTTTGTGTTTCATTGGCTTTATTATTTAGGTTGCATTGTATTATCATGTGTGTAGCTGTACATTATTCTGTGTTTAACTCTTTAGTAAGATATACGTTAAACCCCAATACAATGAAAAGTATATGAATCATGAATGTTTATAATGTTTATTTTCTAGTAATTTCTCTCTATCAGATTACCATCTTATATCTTTAGTTATTGTGTACCTTTTCTTTTTTTGGATAAGAAACAATTTTATTGATATGAAATTGCAACCAAAAAAAAAAAAAAGACAAAGAAAAAGGGAGTTATTGAGTACTTAACAATCACCATCCTTCAAGTTTAAGTGTTACATCATCTTTGGGTGTTTCATGTTGACATTTCGGTTGTTAAACTATTTATAGATATGTTGGAATTTAAGCTATCTTATGTTTCAAGCTCTAGAATGTATTTCATTTTCATCATTGTTGTTCCTATTAAATATATGGGCTCAACACAAAATGGTATTTTACTTATTTCTTTTTTTAATCATGCTATTTGCATATACTGTTTTCTTTCATCAAAGTGAAAAAATATGTTTTCTCTATAATGATAGGAATGGGATGTTTTGGTGCTGTCCAATTTTGCATTAGAACAACAGCTGCATACAGCTAGACAGGAGCTTAGTCATGCCTTGTATCAGGTATATTATTTTTAAATTTTTTTGTTAATTCTGAATTTCCAAGGGTGCAAAGAACAATGTATCTATTTTTCATCTTCGTTCCATAGTCCATCCGTGATTATATTATATATTTTTGCCACATGATTTTGCCAATTGATTTCAGCTTTTTCAGTTTTGGATTTTTTGGATCTATTTTATATGTTTTATACTTAATGCCTTACTGGTTTACTTCTGTTATCCAGCAATGTTTTGCAAGCCATATATTAAGCATATTTATGTTTTGCAATGTGGTGAAGTCATGATGAGATGACTAGAGTTTCGAAAGCTTAACTATTGGTTTTTTTTCCCCTTCTAGCATGATGCTGCATGTCGTGTGATTGCAAGACTTAAAAAGGAACGGGATGAGGCTAGGTCCTTACTTGCTCAGGCAGAGAGGCAGATGCCTTTGTCGTCAACTTCATTTTCATCCAATGCTGCTGCTGTCAATGTTAATGGGAAAAGAGGTTTGTCCTCTCAATCATGCATCAGCATGGATTTTCATGAATTCCCTGGTTCTAATTTGAGTTGATTTTTCATTTTGCCAGTTAATGAGGATGAGGAATTGGGTCCTGATGGGAAGAAAATACGTCCAGGAATATCAGCCACTGTTATCTCTGAGCTCACAGATTGTAATGCTGCTCTATCACAACAAAGGAAGAGGCGGCAGGTATTTTGATGAAAATAAAAGTCAATTAAATATTATTATTTCCTATTAAATAAAAGGATAATTGTTGAATGGATGATGTGAATGTTTAAGATGTCAGAGGACAGGCTTTCCTTATAAACATGCATTAATTTGTAGATTGATTATTTGATCTCAGATACCTCCTACGTTGGTTCCTGTTGAGGCTCTAGAAAGTTACACCCAGATTTCTAGTCATCCACTTCATAAAACAAGCAAACCAGGCATTATATCTCTTGACATCCATCATGAGAAGGTATGATTCTAAAGTGCATCAGCCTATATCCAAATAATTTTTCTTAAATAAGTATTACATGGTCTTCATTAAAACAATTTTTTGAAGTCATACTTGCGAGTTCAATTGACCATTTTATTCAATCTGGCCAACGGGCTTTTTTGGGTGAAGAATAAGGCGTGCATGTAACATTTGTTTCACAGTTCATTCCTTTTGCTTCATTTTCCCTTGGAACAGTCTAAACTTCTAAGCCATGAAATGATAATAGTTCAAATATTTAGAAGGATTTATCCTTGTTTTTCCCCTCCTTTTTGATGAAAAATTTAACTCATTAATTTTACGTGCAATTAGTAATGTGGTTTTAAGCTTAGGGATCATGTCCACGTGCCTTGGAAATAAACAGAAGAGCTTTGATAAATTATATGGTGAATTTTTGTTAGGATACCTCCTAACAAGGAAACTCCACGAACAACAAAGAACATAAGAACACTCAAAGATAGACTTATATTGCAATGTAGTAGGAATTACAATGTAAGAACAGCCTTTCATGAGGGTTATCTCTCTCCCAAATTCTCCCAATGGAAATTCCTACTAAGATTCCTCCTCCTTCCTCCCTAACCCATGTCCTATGTTTATTACTAAAAACCCTAATAAACTTCCTAGCTAATTACTGATATGCCCTCACTAATAAACATATTAATAATCCTAAAATATCCATAACTAGGGTTCTTCACAATTTATTTCCATCATTCATGTCATTAATCCAACGTTGTATTATGAACTAAACCATGAAGACTAGGAAGCTGTTTTAGAGTTCTACATAATATTTAGCCTTTTCTTAAAAATCTTCTATAATGCATTGTTTATCTTGGTGTGACATAGACTATTTGTCGACATGATGGTGAGTTGAAGGTTGATTTTTAATGAAAAAGAGAATAGGAAATAACACAAAGATGTAAGTGGAAAACTCTATAACAGGGAGAAAAAACCACGACAAATCTTTTTCTTTTTATTTTAATTTTGATACATTACAAACATTACAAGAGTAAGAATAAATAGAGGTGAAGAACAACTTATACAAGGAAAAAATATTTGGAGAAGGAAAGACTTAATTCCACAATATCTCCCAAAATAATTTCCCTTTTTATTTTCAACAATTTTCCTTCTAGATGAATATAGCCGTTGCTAATAATAGTTGCACAAATTTATATCTCAGAATTTTCTTTTCCTGGTTTTAGGATGTCATTGCGACGGGAGGGCTGGACACAAATGCTGTTCTTTTTGGTCGATCATCTGGGGAGATTTTATCTACACTAAGTGGCCATTCAAAGAAGGTTTCTTTGCTTAGTTGCATTCAAGTGCCGGAGATATGTAGTATTAATATATTTTGCTAATTGGAATATTGAACATTGTTTGTTTAGGTAACAAGTGTCAAATTTGTGGGCCGAGATGATTTATTCTTGACTGGTTCAGCTGACAAGGTTAGTTTTTCTTGTTGTGGTTATGAGATTAAAATTTTTTCTATTTTTGAATATGTTTCAAATTTCGTGTTTGTAACTTTTGAGGTTTTCAAATAACTTCTGAAGATCATGTTTTCTTCTTTGGCTGAGCATAGTCGAGGCCTGACCTCTTAGAAACTAATCAGTAAGTGCTTAGTTTAATAATATATACATATAAATGAACTGCATCTCCTTTGGTCCATAAATTCTTGGTTCTGAGTTTAGGCTTTAGGTTTCATACCTTGGCTTCATGGACGTGTATTTTTTTTTCTTTTTTGAAACCTCATGAACGTATAGTTATTTTTAACTTACCAAGAAATGATCATACCATAACATTTGAATTATTTTCTATATTTTTGCAATCTAAACTGTCCGCGTCTGCGTCTGAAAGTAGTAATAACTCCTTGTCCTAATTGTGCAGACTGTCCGTGTTTGGCAACAATCTGATGATGGGAACTACAATTGTAGGCACATTTTAAAGGATCATACAGCTGAGGTAAGTCATTTTTTTAATTCAATGGCCATCATTGATCGTCAATGCTGGTTATAGATGAAACATGGTTCAAACACTCAGCCAAGTTGTATTGTCTCAATTGCTAAGAGTCTTATCAGTCTACAACGCTAAAGAATTGTGAAATAGGAGCAAATCAGTTCTGATTTTGTACAACTCAATTTCATGCCTTAACGTACTGTAAAGGAGTGTCAACTTTCAAAATCTTACAGGTCCAAGCTGTTACCGTCCATGCTACCAATAACTTCTTTGTCACTGCCTCTCTTGATAACACATGGTGTTTTTATGAGCTTGCTTCGGGATTATGCCTGACCCAGGTTAGTAAGTTGCTTAATTTTTCTTTTAAGTTTATATATTGTTTACTCTGAGATAGACTATCTTGAATGGGTTGTGATATACTCTTAGTTAACTGCATGTTTTATGTGCCACAGTATTATGTACACTCCAGGTGCTAGGTCTTTTCTGTTTTGTTGTTCAAAGACGGATGACTGAATATATTTCCAAATATATGATACAACTCTGTCAGTCGGTTATGATAGTTTGAGGTTTTGGGATTTGAAATCACATGCAAAATTCCTTCAATACTGAAGAGTGGCCAGTTGGTCATAGAGTATTTAACGACTTATAAATAGAGATATTTCAAGCATTTATCAAATACAAGGGCACTAAAGCGCCTCAAACACATTTTCCTCGAATCTGATGCTCTCCACATTTATTCCTCTTTAAACAGTGATTACCTGAAGCAAAGTATTGTTATAGAATTGATTAAACTATTGAGGTCAATGATTTATCTAAATAAAATGCTGCGCTGCTTGTGCTGCCAAACAATTTGTGAATAAGTTTGCCATTTCACCAACTTAACAAGCTTGACTAATGGTAGGGTCTCTATGTAGTCTCATTTCATAGGCAGAAAGCAAGTAGCCTAGTGTATTTCAAATACTGAAAAAAATACATGAAATGAACCTTCCCATGGATAAGAAACATTTCATTGATGGATGGAATATTCAAAGATACCTTCCCCATGTTAAGCACACAAGTGACTTTTAGGATAATCACAGGGTTCTTTTCTGAGATACAGTTTTATTTTGCAGCTACACGTGATGATAGGAAATCTTGGTGTAGTTTTTAAAAAAGGTCACCCATTTAGATTTGTATGACCTGTTTGGTTGGTCAGCTTGAATTGGGAATTGTCTCATAGAAAATTTATTTATCTTATCCTCTGCAGGTTGCAGAGGATTCACAAACGGAGGGCTACACATCTGCTGCCTTTCATCCTGATGGTCTCATCCTTGGAACAGGCACGTCAGAGGCTCTTGTTAAAATTTGGGATGTAAAAAGTCAGGTGAGATTCTCTAACTTAGCAAGATATATCCCCATATCTCTAACTTTGTGCGCTCATTTCTTCTTTAATGCTTTTGCCTGCAGAAAAATGTGGCCAAATTTGATGGACACGTTGGGGCAGTAACTGCAATATCTTTTTCTGAAAATGGTTATTTCCTTGCGGTATGTGTTAAATTGGTTGCAGTTAAAGGTTTAATAATTTAACTTGGACATCATTGCAACTAATTAAAATCTAAACTGCTCAGACTGCAGCTCATGATGGAGTAAAGCTGTGGGACCTTCGAAAATTGAAGAACTTCCGTACATTTGCACCTTATGATTCAGAAACTCCAACAAACTCTGGTACGTTTCTTTCTGTATATGCTGAATGATGTAACATAACTAGGAAGGTAATGTCGGACGTTTAGTCATGTCTTGTTTGTGGGAGTAACTGAACACTTGTTTCTGGTTTTGTAGTGGACTTTGATCATAGTGGATCTTACCTTGCGATTGCTGGCTCAGACATAAGGTAAGCGTTTAACCCTTGAAATTATATCTAACCTACCCTTAAATGGAAATCGGTATTCAATTTATTTATCACCTTATCTTTTGTTTTTAGTAGTTTCTACAAGGTCTAACGACGATGCTTGCTTGAACTCGCAGGGTTTACCAAGTTGCTAGTGTGAAATCTGAATGGAATTGCATCAAAACTATTCCAGATTTGTCTGGCACAGGTAATGTATCCCCCTCGCACATGTGTGCACGTGTGTGTGTGTGTATATGTATACGTATATTATCACATTAAATAAATGGGAGTAGATTATTGCTGATTATTGTGTTGATAATAATTCCCGTTCTATGCTCTATTTCAGGGAAGGCAACTTGTCTAAAATTTGGACCGGATGCAAAATACTTGGCAGTCGGGTCAATGGATCGAAATCTTCGAATCTTTGGTGTGCCTGGGGAAGATGGTGCGATGGAGGCATGAGTTTGCATCCAGAATCGAAATTTCCAGAACAGAAAAGATGGAAGCTAGTTTCTGATTATATTTGCACGATTACAGGATTGATTTATGGTATTAAGCAACAAGATTCTGAAGCAGAGGCGTCTTTGGAAGGTTCTCCAGCAAAGTTGAGAGTTCTTTACACCCAGATCAACAAATTGAGCAAAATATTTTCACCATTTTTTTTTTCTTTTTATGTTGTAATTTGGACTATAATCAGGTTTGATTCTCATTTCTAAGAATGTATGATTTTGCGGAGGTGTCTGCCCGACTTCATGTAGCCATAGAACTGTTAATATACGCTGACATTTTTCATTGACCGTTTTATTGCATTTTAGTAGTGGATATACTTTATTAGATTCATATTTCCTGCTTGACTCTTGTGCCCAATGAAATATCATGAGGGCTTTCTATTTATTATTATCATTATTATTAATTATGATCGTTTGGTGTTATTAAGTAAAACCCCTTACTTTAATAATATGAGGTGAATATTCAGTAATGCTTTCATCTGCACACCCCCAAAAAAATATTTTGAAGGTTTACTAAGATCACATACACACACAAAAAGAGGAAAAAAAAAAAAAAAAAAAGAATATTCTCAGTGTGAAGGGAATTGCGTATTGACATTTAAAAAATTAATTGATCTTATTCCGGTGATTTCTTTATGATATTATCGAAGGGCGGTTCTTGAAAAATTGAAGAATTACAAAAGAATGAAATTCTGTGGTTCACATCCATTGAAATTGTATGTAAGAACTGCCAGTGTAAGACATTAATTTTACAGAACCAATCTAGATACCAAAGAGTTGAAAGTGGAAAAAGAAAAGAATATTGGAGAAGGCAAATAGTGTTTAGCCAATAACTTAACGAAGCATTCCGTCCCATCTTTGTCATGAAACATATTGCGAAGCATGAGCAAATCCCCAGAGCTGCATTAACCCAGATAACACAAACATAAGCAGAAGGAATGCAGGCATAGGCACAGTATCACTAAAAAGACACACGTAACCGGTTTTCATCGTAAGTTCGAGGACGTATTTCTTTTCAGAGTCAGAATTTACCTCAACATTCTTCAACTCAAACTCCTGGGCATGTGCTAAGCATAAGTTACCAAACGTCTCACATGGTCCACTGGTTCCATTCAACCTTTTGTAAGATACAGAAAATTTGGTCATTAATAGATGCGGTACATGGGAGTTTAGAATGGAGTAGTAGATGAGAAAAGAAATACTAACAGATCTTCTTCGAGACGTAATGCGAAATTACTGCCACCACCAAGTGCTAGTAAATCATCCATACACATGTAGAAATAACGGTTCGCTCCTATTCATATTTCCAAATCAGGCAAATACAAAAAGGTTAGTACCTTCATTCTTTCACTCTTTTCTTTCGATGCAAGGGATGGTTTTGTTTTCCAGATCAGTTAACATCCAAATATACAACTTCTGTAGGCATCTATAATACAGACCACTTTCACTTCGTTCCATTAGAAAGATGCATACATAAGATGTCTACAGCCATATCTCACTATCACTATTCGTTCATTCTTGCAAAATAGTTGTGATTTATACGATACTTCAACTTCTGAAAACGATCAAATTCACTCGAAACTAACAGAGGTGAGGGGCTTAATACACTGACCAGTCAAACATATTGGTGGTGAAGGATACACATCCAAGGAGTATAGAAGTAAAGGAGATTGCAACTAAGAAAAAGGAGAACTTACCAGTTGGTCTGAAGAGCTGCGGTTCACCATACATGGTGGTAAAGACGAAAGTTTGATTTGTTCCCTAGCACCATAAAATTAGACAATACAGTCAAACTTTAAACACGAAAACAAAATAAAGATTGGGACACAAAGTGGAAATGAGCATCCTCAGAGGAAGAGAAGTCAACTAACTTGATATTTTCTCTTTGCAGTAGGCTTCAATGGGCATTCCAGAAGACCACCAAACACGGCACCTTGCCGATCGCCAACAACCTATAGATCGCAGGGAAACACAATGCCATTATTAAACGAACATAAAGTTCTGCACTGGTTTAGCTTTTTAATAGGATTAAGATCTGGGACATGAATAAGTCATATAATTAACATACCAGCAAACAAGGACCAGAAAGTTCACCACTTCTGCGGATGAGTGTTCGAAGAGATATGCCATGTCTCAATGTACTGCCCTTCATTAGAAAGAAAGTCATGTTAAGGTCATAATGCACCACAATACTATCTCCATATATCAACATTTCAAATAAATTACCTATATAACAAGACCCATTGTCGCCCTTTCACGATATTAGGAAGACGTTGTAGCAGGAAATCATAGGTGTCAGTGGAAATCAGAACAGAATCAACCGTGAGATTTGTCACAATCTTTTCTGGACTACGTTGGCAAGTTGCTTCTTCAAATACTTCAGAACTACTAGTACTCCTTCCAGAGACAGAGTCATCAAAATCTTCCTCATTGTCTCGAATGTCTTTGTTCTCACATACTGAACTGCATTCCAATGGTTCTAAAGAATCAAAACTGACAATATCATATGGCACAGGGCGAGGCTGA

mRNA sequence

ATGGCCTGGTTTACGGACTCTCTTCTTCCCCGATCTCTCCTTCCATCTCCGCTTCGTCTCGTGCTGCCGGTTGCTGACTGCCCCAACGTTGCCGTCCGCTGTCGGGGAAAATCGTGCTCTGCTGCTACTGCACTCGTAAACCTCTCCGGTGAGATTCCGGAAGAGCCAGTTGTCTCCAAGAATTCTGGATTACTCTTCGAGAAGCGCTTAATCGAGAGGCACATTTTGGACTATGGGAAATGCCCTGTTACAGGTGAACCGCTTTCCATTGATGACATTGTTCCAATTAAAACCGGAAAGATAGTCAAGCCCAGGCAAGCTGCTAGCATCCCTGGAATGCTTGGAATGTTCCAGAATGAATGGGATGTTTTGGTGCTGTCCAATTTTGCATTAGAACAACAGCTGCATACAGCTAGACAGGAGCTTAGTCATGCCTTGTATCAGCATGATGCTGCATGTCGTGTGATTGCAAGACTTAAAAAGGAACGGGATGAGGCTAGGTCCTTACTTGCTCAGGCAGAGAGGCAGATGCCTTTGTCGTCAACTTCATTTTCATCCAATGCTGCTGCTGTCAATGTTAATGGGAAAAGAGTTAATGAGGATGAGGAATTGGGTCCTGATGGGAAGAAAATACGTCCAGGAATATCAGCCACTGTTATCTCTGAGCTCACAGATTGTAATGCTGCTCTATCACAACAAAGGAAGAGGCGGCAGATACCTCCTACGTTGGTTCCTGTTGAGGCTCTAGAAAGTTACACCCAGATTTCTAGTCATCCACTTCATAAAACAAGCAAACCAGGCATTATATCTCTTGACATCCATCATGAGAAGGATGTCATTGCGACGGGAGGGCTGGACACAAATGCTGTTCTTTTTGGTCGATCATCTGGGGAGATTTTATCTACACTAAGTGGCCATTCAAAGAAGGTAACAAGTGTCAAATTTGTGGGCCGAGATGATTTATTCTTGACTGGTTCAGCTGACAAGACTGTCCGTGTTTGGCAACAATCTGATGATGGGAACTACAATTGTAGGCACATTTTAAAGGATCATACAGCTGAGGTCCAAGCTGTTACCGTCCATGCTACCAATAACTTCTTTGTCACTGCCTCTCTTGATAACACATGGTGTTTTTATGAGCTTGCTTCGGGATTATGCCTGACCCAGGTTGCAGAGGATTCACAAACGGAGGGCTACACATCTGCTGCCTTTCATCCTGATGGTCTCATCCTTGGAACAGGCACGTCAGAGGCTCTTGTTAAAATTTGGGATGTAAAAAGTCAGAAAAATGTGGCCAAATTTGATGGACACGTTGGGGCAGTAACTGCAATATCTTTTTCTGAAAATGGTTATTTCCTTGCGACTGCAGCTCATGATGGAGTAAAGCTGTGGGACCTTCGAAAATTGAAGAACTTCCGTACATTTGCACCTTATGATTCAGAAACTCCAACAAACTCTGTGGACTTTGATCATAGTGGATCTTACCTTGCGATTGCTGGCTCAGACATAAGGGAAGGCAACTTGTCTAAAATTTGGACCGGATGCAAAATACTTGGCAGTCGGGTCAATGGATCGAAATCTTCGAATCTTTGGTGTGCCTGGGGAAGATGGTGCGATGGAGGCATGAGTTTGCATCCAGAATCGAAATTTCCAGAACAGAAAAGATGGAAGCTAGTTTCTGATTATATTTGCACGATTACAGGATTGATTTATGGTATTAAGCAACAAGATTCTGAAGCAGAGGCGTCTTTGGAAGGTTCTCCAGCAAACAAACAAGGACCAGAAAGTTCACCACTTCTGCGGATGAGTGTTCGAAGAGATATGCCATGTCTCAATGTACTGCCCTTCATTAGAAAGAAAGTGTCAGTGGAAATCAGAACAGAATCAACCGTGAGATTTGTCACAATCTTTTCTGGACTACGTTGGCAAGTTGCTTCTTCAAATACTTCAGAACTACTAGTACTCCTTCCAGAGACAGAGTCATCAAAATCTTCCTCATTGTCTCGAATGTCTTTGTTCTCACATACTGAACTGCATTCCAATGGTTCTAAAGAATCAAAACTGACAATATCATATGGCACAGGGCGAGGCTGA

Coding sequence (CDS)

ATGGCCTGGTTTACGGACTCTCTTCTTCCCCGATCTCTCCTTCCATCTCCGCTTCGTCTCGTGCTGCCGGTTGCTGACTGCCCCAACGTTGCCGTCCGCTGTCGGGGAAAATCGTGCTCTGCTGCTACTGCACTCGTAAACCTCTCCGGTGAGATTCCGGAAGAGCCAGTTGTCTCCAAGAATTCTGGATTACTCTTCGAGAAGCGCTTAATCGAGAGGCACATTTTGGACTATGGGAAATGCCCTGTTACAGGTGAACCGCTTTCCATTGATGACATTGTTCCAATTAAAACCGGAAAGATAGTCAAGCCCAGGCAAGCTGCTAGCATCCCTGGAATGCTTGGAATGTTCCAGAATGAATGGGATGTTTTGGTGCTGTCCAATTTTGCATTAGAACAACAGCTGCATACAGCTAGACAGGAGCTTAGTCATGCCTTGTATCAGCATGATGCTGCATGTCGTGTGATTGCAAGACTTAAAAAGGAACGGGATGAGGCTAGGTCCTTACTTGCTCAGGCAGAGAGGCAGATGCCTTTGTCGTCAACTTCATTTTCATCCAATGCTGCTGCTGTCAATGTTAATGGGAAAAGAGTTAATGAGGATGAGGAATTGGGTCCTGATGGGAAGAAAATACGTCCAGGAATATCAGCCACTGTTATCTCTGAGCTCACAGATTGTAATGCTGCTCTATCACAACAAAGGAAGAGGCGGCAGATACCTCCTACGTTGGTTCCTGTTGAGGCTCTAGAAAGTTACACCCAGATTTCTAGTCATCCACTTCATAAAACAAGCAAACCAGGCATTATATCTCTTGACATCCATCATGAGAAGGATGTCATTGCGACGGGAGGGCTGGACACAAATGCTGTTCTTTTTGGTCGATCATCTGGGGAGATTTTATCTACACTAAGTGGCCATTCAAAGAAGGTAACAAGTGTCAAATTTGTGGGCCGAGATGATTTATTCTTGACTGGTTCAGCTGACAAGACTGTCCGTGTTTGGCAACAATCTGATGATGGGAACTACAATTGTAGGCACATTTTAAAGGATCATACAGCTGAGGTCCAAGCTGTTACCGTCCATGCTACCAATAACTTCTTTGTCACTGCCTCTCTTGATAACACATGGTGTTTTTATGAGCTTGCTTCGGGATTATGCCTGACCCAGGTTGCAGAGGATTCACAAACGGAGGGCTACACATCTGCTGCCTTTCATCCTGATGGTCTCATCCTTGGAACAGGCACGTCAGAGGCTCTTGTTAAAATTTGGGATGTAAAAAGTCAGAAAAATGTGGCCAAATTTGATGGACACGTTGGGGCAGTAACTGCAATATCTTTTTCTGAAAATGGTTATTTCCTTGCGACTGCAGCTCATGATGGAGTAAAGCTGTGGGACCTTCGAAAATTGAAGAACTTCCGTACATTTGCACCTTATGATTCAGAAACTCCAACAAACTCTGTGGACTTTGATCATAGTGGATCTTACCTTGCGATTGCTGGCTCAGACATAAGGGAAGGCAACTTGTCTAAAATTTGGACCGGATGCAAAATACTTGGCAGTCGGGTCAATGGATCGAAATCTTCGAATCTTTGGTGTGCCTGGGGAAGATGGTGCGATGGAGGCATGAGTTTGCATCCAGAATCGAAATTTCCAGAACAGAAAAGATGGAAGCTAGTTTCTGATTATATTTGCACGATTACAGGATTGATTTATGGTATTAAGCAACAAGATTCTGAAGCAGAGGCGTCTTTGGAAGGTTCTCCAGCAAACAAACAAGGACCAGAAAGTTCACCACTTCTGCGGATGAGTGTTCGAAGAGATATGCCATGTCTCAATGTACTGCCCTTCATTAGAAAGAAAGTGTCAGTGGAAATCAGAACAGAATCAACCGTGAGATTTGTCACAATCTTTTCTGGACTACGTTGGCAAGTTGCTTCTTCAAATACTTCAGAACTACTAGTACTCCTTCCAGAGACAGAGTCATCAAAATCTTCCTCATTGTCTCGAATGTCTTTGTTCTCACATACTGAACTGCATTCCAATGGTTCTAAAGAATCAAAACTGACAATATCATATGGCACAGGGCGAGGCTGA

Protein sequence

MAWFTDSLLPRSLLPSPLRLVLPVADCPNVAVRCRGKSCSAATALVNLSGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQAERQMPLSSTSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTDCNAALSQQRKRRQIPPTLVPVEALESYTQISSHPLHKTSKPGIISLDIHHEKDVIATGGLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSQTEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDLRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIREGNLSKIWTGCKILGSRVNGSKSSNLWCAWGRWCDGGMSLHPESKFPEQKRWKLVSDYICTITGLIYGIKQQDSEAEASLEGSPANKQGPESSPLLRMSVRRDMPCLNVLPFIRKKVSVEIRTESTVRFVTIFSGLRWQVASSNTSELLVLLPETESSKSSSLSRMSLFSHTELHSNGSKESKLTISYGTGRG

Homology

[Close]

BLAST of CaUC05G083350 vs. NCBI nr
Match: TYK17345.1 (pre-mRNA-processing factor 19 [Cucumis melo var. makuwa])

HSP 1 Score: 921.0 bits (2379), Expect = 6.1e-264
Identity = 471/517 (91.10%), Postives = 482/517 (93.23%), Query Frame = 0


Query: 15  PSPLRLVLPVADCPNVAVRCRGKSCSAATALVN----------LSGEIPEEPVVSKNSGL 74
           PSPLRL LP      VAV C G SCSAA ALVN          +SGEIPEEPVVS+NSGL
Sbjct: 33  PSPLRLELP------VAVHCLGISCSAAAALVNRISPAKMNCSISGEIPEEPVVSRNSGL 92

Query: 75  LFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQAASIPGMLGMFQNEWDVL 134
           LFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQAASIPGMLGMFQNEWDVL
Sbjct: 93  LFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQAASIPGMLGMFQNEWDVL 152

Query: 135 VLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQAERQMPLSSTSF 194
           VLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQAERQMPLSSTSF
Sbjct: 153 VLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQAERQMPLSSTSF 212

Query: 195 SSNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTDCNAALSQQRKRRQIPPTLV 254
           SSNA AVNVNGKRVNEDEELGPDGKKIRPGIS TVISELT+CNAALSQQRKRRQIP TLV
Sbjct: 213 SSNAGAVNVNGKRVNEDEELGPDGKKIRPGISDTVISELTECNAALSQQRKRRQIPATLV 272

Query: 255 PVEALESYTQISSHPLHKTSKPGIISLDIHHEKDVIATGGLDTNAVLFGRSSGEILSTLS 314
           PVEALE+YTQISSHPLHKTSKPGI+SLDIHHEKDVIATGGLDTNAVLFGRSSGEILSTLS
Sbjct: 273 PVEALENYTQISSHPLHKTSKPGILSLDIHHEKDVIATGGLDTNAVLFGRSSGEILSTLS 332

Query: 315 GHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRHILKDHTAEVQAVTVHATN 374
           GHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRHILKDHTAEVQAVTVHATN
Sbjct: 333 GHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRHILKDHTAEVQAVTVHATN 392

Query: 375 NFFVTASLDNTWCFYELASGLCLTQVAEDSQTEGYTSAAFHPDGLILGTGTSEALVKIWD 434
           +FFVTASLDNTWCFYELASGLCLTQVAEDS+TEGYTSAAFHPDGLILGTGTSEALVKIWD
Sbjct: 393 DFFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAAFHPDGLILGTGTSEALVKIWD 452

Query: 435 VKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDLRKLKNFRTFAPYDSETPT 494
           VKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDLRKLKNFRTFAPYDS+TPT
Sbjct: 453 VKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDLRKLKNFRTFAPYDSDTPT 512

Query: 495 NSVDFDHSGSYLAIAGSDIREGNLSKI---WTGCKIL 519
           NSVDFDHSGSYLAIAGSDIR   ++ +   W   K L
Sbjct: 513 NSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTL 543

[Close]

BLAST of CaUC05G083350 vs. NCBI nr
Match: KAA0049213.1 (pre-mRNA-processing factor 19 [Cucumis melo var. makuwa])

HSP 1 Score: 906.4 bits (2341), Expect = 1.6e-259
Identity = 471/544 (86.58%), Postives = 482/544 (88.60%), Query Frame = 0


Query: 15  PSPLRLVLPVADCPNVAVRCRGKSCSAATALVN----------LSGEIPEEPVVSKNSGL 74
           PSPLRL LP      VAV C G SCSAA ALVN          +SGEIPEEPVVS+NSGL
Sbjct: 33  PSPLRLELP------VAVHCLGISCSAAAALVNRISPAKMNCSISGEIPEEPVVSRNSGL 92

Query: 75  LFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQAASIPGMLGMFQNEWDVL 134
           LFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQAASIPGMLGMFQNEWDVL
Sbjct: 93  LFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQAASIPGMLGMFQNEWDVL 152

Query: 135 VLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQAERQMPLSSTSF 194
           VLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQAERQMPLSSTSF
Sbjct: 153 VLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQAERQMPLSSTSF 212

Query: 195 SSNAAAVNVNGKR---------------------------VNEDEELGPDGKKIRPGISA 254
           SSNA AVNVNGKR                           VNEDEELGPDGKKIRPGIS 
Sbjct: 213 SSNAGAVNVNGKRGLASESSISMDFHEFLCSNLSRFFILSVNEDEELGPDGKKIRPGISD 272

Query: 255 TVISELTDCNAALSQQRKRRQIPPTLVPVEALESYTQISSHPLHKTSKPGIISLDIHHEK 314
           TVISELT+CNAALSQQRKRRQIP TLVPVEALE+YTQISSHPLHKTSKPGI+SLDIHHEK
Sbjct: 273 TVISELTECNAALSQQRKRRQIPATLVPVEALENYTQISSHPLHKTSKPGILSLDIHHEK 332

Query: 315 DVIATGGLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQS 374
           DVIATGGLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQS
Sbjct: 333 DVIATGGLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQS 392

Query: 375 DDGNYNCRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSQTE 434
           DDGNYNCRHILKDHTAEVQAVTVHATN+FFVTASLDNTWCFYELASGLCLTQVAEDS+TE
Sbjct: 393 DDGNYNCRHILKDHTAEVQAVTVHATNDFFVTASLDNTWCFYELASGLCLTQVAEDSETE 452

Query: 435 GYTSAAFHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAA 494
           GYTSAAFHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAA
Sbjct: 453 GYTSAAFHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAA 512

Query: 495 HDGVKLWDLRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIREGNLSKI---WTG 519
           HDGVKLWDLRKLKNFRTFAPYDS+TPTNSVDFDHSGSYLAIAGSDIR   ++ +   W  
Sbjct: 513 HDGVKLWDLRKLKNFRTFAPYDSDTPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNC 570

[Close]

BLAST of CaUC05G083350 vs. NCBI nr
Match: XP_038891633.1 (pre-mRNA-processing factor 19 [Benincasa hispida])

HSP 1 Score: 901.7 bits (2329), Expect = 3.8e-258
Identity = 451/458 (98.47%), Postives = 456/458 (99.56%), Query Frame = 0


Query: 47  NLSGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQ 106
           ++SGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQ
Sbjct: 4   SISGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQ 63

Query: 107 AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA 166
           AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA
Sbjct: 64  AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA 123

Query: 167 RSLLAQAERQMPLSSTSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTDC 226
           RSLLAQAERQMPLSSTSFSSNA AVNVNGKRVNEDEELGPDGKKIRPGISATVISELTDC
Sbjct: 124 RSLLAQAERQMPLSSTSFSSNATAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTDC 183

Query: 227 NAALSQQRKRRQIPPTLVPVEALESYTQISSHPLHKTSKPGIISLDIHHEKDVIATGGLD 286
           NAALSQQRKRRQIPPTLVPVEALESY QISSHPLHKTSKPGIISLDI+HEKDVIATGGLD
Sbjct: 184 NAALSQQRKRRQIPPTLVPVEALESYNQISSHPLHKTSKPGIISLDINHEKDVIATGGLD 243

Query: 287 TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRH 346
           TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNY+CRH
Sbjct: 244 TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYDCRH 303

Query: 347 ILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSQTEGYTSAAFHP 406
           ILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDS+TEGYTSAAFHP
Sbjct: 304 ILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAAFHP 363

Query: 407 DGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDL 466
           DGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDL
Sbjct: 364 DGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDL 423

Query: 467 RKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIR 505
           RKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIR
Sbjct: 424 RKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIR 461

[Close]

BLAST of CaUC05G083350 vs. NCBI nr
Match: XP_008438467.1 (PREDICTED: pre-mRNA-processing factor 19 [Cucumis melo])

HSP 1 Score: 896.0 bits (2314), Expect = 2.1e-256
Identity = 449/475 (94.53%), Postives = 461/475 (97.05%), Query Frame = 0


Query: 47  NLSGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQ 106
           ++SGEIPEEPVVS+NSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQ
Sbjct: 4   SISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQ 63

Query: 107 AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA 166
           AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA
Sbjct: 64  AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA 123

Query: 167 RSLLAQAERQMPLSSTSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTDC 226
           RSLLAQAERQMPLSSTSFSSNA AVNVNGKRVNEDEELGPDGKKIRPGIS TVISELT+C
Sbjct: 124 RSLLAQAERQMPLSSTSFSSNAGAVNVNGKRVNEDEELGPDGKKIRPGISDTVISELTEC 183

Query: 227 NAALSQQRKRRQIPPTLVPVEALESYTQISSHPLHKTSKPGIISLDIHHEKDVIATGGLD 286
           NAALSQQRKRRQIP TLVPVEALE+YTQISSHPLHKTSKPGI+SLDIHHEKDVIATGGLD
Sbjct: 184 NAALSQQRKRRQIPATLVPVEALENYTQISSHPLHKTSKPGILSLDIHHEKDVIATGGLD 243

Query: 287 TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRH 346
           TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRH
Sbjct: 244 TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRH 303

Query: 347 ILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSQTEGYTSAAFHP 406
           ILKDHTAEVQAVTVHATN+FFVTASLDNTWCFYELASGLCLTQVAEDS+TEGYTSAAFHP
Sbjct: 304 ILKDHTAEVQAVTVHATNDFFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAAFHP 363

Query: 407 DGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDL 466
           DGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDL
Sbjct: 364 DGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDL 423

Query: 467 RKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIREGNLSKI---WTGCKIL 519
           RKLKNFRTFAPYDS+TPTNSVDFDHSGSYLAIAGSDIR   ++ +   W   K L
Sbjct: 424 RKLKNFRTFAPYDSDTPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTL 478

[Close]

BLAST of CaUC05G083350 vs. NCBI nr
Match: XP_004134043.1 (pre-mRNA-processing factor 19 [Cucumis sativus])

HSP 1 Score: 892.5 bits (2305), Expect = 2.3e-255
Identity = 448/475 (94.32%), Postives = 460/475 (96.84%), Query Frame = 0


Query: 47  NLSGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQ 106
           ++SGEIPEEPVVS+NSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQ
Sbjct: 4   SISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQ 63

Query: 107 AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA 166
           AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA
Sbjct: 64  AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA 123

Query: 167 RSLLAQAERQMPLSSTSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTDC 226
           RSLLA AERQMPLSSTSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGIS  VISELT+C
Sbjct: 124 RSLLALAERQMPLSSTSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISDAVISELTEC 183

Query: 227 NAALSQQRKRRQIPPTLVPVEALESYTQISSHPLHKTSKPGIISLDIHHEKDVIATGGLD 286
           NAALSQQRKRRQIP TLVPVEALE+YTQISSHPLHKTSKPGI+SLDIHHEKDVIATGGLD
Sbjct: 184 NAALSQQRKRRQIPATLVPVEALENYTQISSHPLHKTSKPGIMSLDIHHEKDVIATGGLD 243

Query: 287 TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRH 346
           TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRH
Sbjct: 244 TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRH 303

Query: 347 ILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSQTEGYTSAAFHP 406
           ILKDHTAEVQAVTVHATN+FFVTASLDNTWCFYELASGLCLTQVAEDS+TEGYTSAAFHP
Sbjct: 304 ILKDHTAEVQAVTVHATNDFFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAAFHP 363

Query: 407 DGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDL 466
           DGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDL
Sbjct: 364 DGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDL 423

Query: 467 RKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIREGNLSKI---WTGCKIL 519
           RKLKNFRTFAPYDS+TPTNSVDFDHSGSYLAIAGSDIR   ++ +   W   K L
Sbjct: 424 RKLKNFRTFAPYDSDTPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTL 478

[Close]

BLAST of CaUC05G083350 vs. ExPASy Swiss-Prot
Match: Q9AV81 (Pre-mRNA-processing factor 19 OS=Oryza sativa subsp. japonica OX=39947 GN=PRP19 PE=2 SV=1)

HSP 1 Score: 708.8 bits (1828), Expect = 6.3e-203
Identity = 350/488 (71.72%), Postives = 410/488 (84.02%), Query Frame = 0


Query: 48  LSGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPR-- 107
           +SGE+P+EPVVSK SGLLFE+RL+ER+I D+GKCPVT E L++DDIV +KT K+VKPR  
Sbjct: 5   ISGEVPDEPVVSKKSGLLFERRLVERYIEDHGKCPVTKEELTMDDIVAVKTNKVVKPRQL 64

Query: 108 QAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDE 167
           QAASIPG+LGMFQNEWD ++LS+FALEQQLHTARQELSHALYQHDAACRVIARLKKERDE
Sbjct: 65  QAASIPGLLGMFQNEWDAIMLSSFALEQQLHTARQELSHALYQHDAACRVIARLKKERDE 124

Query: 168 ARSLLAQAERQMPLSSTSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTD 227
           AR+LLAQAERQ+P S     +   AV  NGKR  ED E+GPDGKKIRPGI+  +I ELT+
Sbjct: 125 ARALLAQAERQIPASMA--GAAPTAVVSNGKRAFED-EVGPDGKKIRPGINPVMIDELTE 184

Query: 228 CNAALSQQRKRRQIPPTLVPVEALESYTQISSHPLHKTSKPGIISLDIHHEKDVIATGGL 287
           CN  LS  RK+RQ+PPTL  ++A+E YTQISSHPLHKT+KPGI+S+DIH  KD+IATGG+
Sbjct: 185 CNTMLSAHRKKRQVPPTLASIDAIERYTQISSHPLHKTNKPGILSMDIHPSKDIIATGGI 244

Query: 288 DTNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCR 347
           DTNAVLF R SG+IL TL+GHSKK+TS+KFV RD+LF+TGSADKTV++WQ S++GNYNC 
Sbjct: 245 DTNAVLFDRPSGQILCTLTGHSKKITSLKFVPRDELFVTGSADKTVKIWQGSEEGNYNCI 304

Query: 348 HILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSQTEGYTSAAFH 407
           H LKDHTAEV+AVTVHAT  +FVTAS DNTWCFY++ SG CLTQV E S  EGYTSA+FH
Sbjct: 305 HTLKDHTAEVEAVTVHATQKYFVTASKDNTWCFYDIPSGSCLTQVGESSGQEGYTSASFH 364

Query: 408 PDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWD 467
           PDGLILGTGT+EA+VKIWDVK+Q NVAKF+GHVG VTA+SFSENGYFLATAA DGVKLWD
Sbjct: 365 PDGLILGTGTTEAVVKIWDVKTQSNVAKFEGHVGPVTAMSFSENGYFLATAALDGVKLWD 424

Query: 468 LRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIR---EGNLSKIWTGCKILGSRV 527
           LRKL+NFRT +PYDS+TPTNSV+FD SGSYLA+ GSD R     N+   W   K L    
Sbjct: 425 LRKLRNFRTISPYDSDTPTNSVEFDFSGSYLAVGGSDTRVYQVANVKLEWNLVKTLPDLS 484

Query: 528 NGSKSSNL 531
              K +N+
Sbjct: 485 GTGKVTNV 489

[Close]

BLAST of CaUC05G083350 vs. ExPASy Swiss-Prot
Match: Q94BR4 (Pre-mRNA-processing factor 19 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=PRP19A PE=1 SV=1)

HSP 1 Score: 675.6 bits (1742), Expect = 5.9e-193
Identity = 345/489 (70.55%), Postives = 402/489 (82.21%), Query Frame = 0


Query: 48  LSGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPR-- 107
           +SGE+PEEPVVSK SGLL+EKRLI+ HI DYGKCPVTGEP ++DDIVPIKTGKIVKP+  
Sbjct: 5   ISGEVPEEPVVSKKSGLLYEKRLIQTHISDYGKCPVTGEPHTLDDIVPIKTGKIVKPKPL 64

Query: 108 QAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDE 167
             ASIPG+LG FQ EWD L+LSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDE
Sbjct: 65  HTASIPGLLGTFQTEWDSLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDE 124

Query: 168 ARSLLAQAERQMPLSSTSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTD 227
           +R LLA+AERQ+P +    +SNAA    NGKR  +D E GP+ KK+R GISA VI+ELTD
Sbjct: 125 SRQLLAEAERQLPAAPEVATSNAAL--SNGKRGIDDGEQGPNAKKMRLGISAEVITELTD 184

Query: 228 CNAALSQQRKRRQIPPTLVPVEALESYTQISSHPLHKTSKPGIISLDIHHEKDVIATGGL 287
           CNAALSQQRK+RQIP TL  V+ALE +TQ+SSHPLHKT+KPGI S+DI H KDVIATGG+
Sbjct: 185 CNAALSQQRKKRQIPKTLASVDALEKFTQLSSHPLHKTNKPGIFSMDILHSKDVIATGGI 244

Query: 288 DTNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCR 347
           DT AVLF R SG+ILSTL+GHSKKVTS+KFVG  DL LT S+DKTVR+W  S+DGNY  R
Sbjct: 245 DTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSR 304

Query: 348 HILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSQTE-GYTSAAF 407
           H LKDH+AEV+AVTVHATN +FV+ASLD+TWCFY+L+SGLCL QV + S+ +  YT+AAF
Sbjct: 305 HTLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTAAAF 364

Query: 408 HPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLW 467
           HPDGLILGTGT++++VKIWDVKSQ NVAKF GH G +T+ISFSENGYFLATAA DGV+LW
Sbjct: 365 HPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALDGVRLW 424

Query: 468 DLRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIREGNLSKI---WTGCKILGSR 527
           DLRKLKNFRTF   D+    NSV+FDHSGSYL IA SDIR    + +   W   K L   
Sbjct: 425 DLRKLKNFRTFDFPDA----NSVEFDHSGSYLGIAASDIRVFQAASVKAEWNPIKTLPDL 484

Query: 528 VNGSKSSNL 531
               K++++
Sbjct: 485 SGTGKATSV 487

[Close]

BLAST of CaUC05G083350 vs. ExPASy Swiss-Prot
Match: O22785 (Pre-mRNA-processing factor 19 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=PRP19B PE=1 SV=3)

HSP 1 Score: 673.3 bits (1736), Expect = 2.9e-192
Identity = 334/459 (72.77%), Postives = 387/459 (84.31%), Query Frame = 0


Query: 48  LSGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPR-- 107
           +SGE+P EPVVS  SGLLFE+RLIERHI DYGKCPVTGEPL+IDDIVPIKTG+I+KP+  
Sbjct: 5   ISGEVPVEPVVSTKSGLLFERRLIERHISDYGKCPVTGEPLTIDDIVPIKTGEIIKPKTL 64

Query: 108 QAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDE 167
             ASIPG+LG FQNEWD L+LSNFALEQQLHTARQELSHALYQHD+ACRVIARLKKERDE
Sbjct: 65  HTASIPGLLGTFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDSACRVIARLKKERDE 124

Query: 168 ARSLLAQAERQMPLSSTSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTD 227
           AR LLA+ ER +P +  + ++NAA    NGKR   DEELGPD KK+ PGISA +I+ELTD
Sbjct: 125 ARQLLAEVERHIPAAPEAVTANAAL--SNGKRAAVDEELGPDAKKLCPGISAEIITELTD 184

Query: 228 CNAALSQQRKRRQIPPTLVPVEALESYTQISSHPLHKTSKPGIISLDIHHEKDVIATGGL 287
           CNAALSQ+RK+RQIP TL  ++ LE +TQ+SSHPLHKT+KPGI S+DI H KDVIATGG+
Sbjct: 185 CNAALSQKRKKRQIPQTLASIDTLERFTQLSSHPLHKTNKPGICSMDILHSKDVIATGGV 244

Query: 288 DTNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCR 347
           D  AVLF R SG+ILSTL+GHSKKVTSVKFVG  DL LT SADKTVR+W+   DGNY C 
Sbjct: 245 DATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACG 304

Query: 348 HILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSQTEGYTSAAFH 407
           + L DH+AEV+AVTVH TN +FV+ASLD TWCFY+L+SG CL QV++DS+   YT+AAFH
Sbjct: 305 YTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFH 364

Query: 408 PDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWD 467
           PDGLILGTGTS+++VKIWDVKSQ NVAKFDGH G VTAISFSENGYFLATAA DGV+LWD
Sbjct: 365 PDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGVRLWD 424

Query: 468 LRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIR 505
           LRKL+NF++F   D+    NSV+FD SGSYL IA SDI+
Sbjct: 425 LRKLRNFKSFLSADA----NSVEFDPSGSYLGIAASDIK 457

[Close]

BLAST of CaUC05G083350 vs. ExPASy Swiss-Prot
Match: Q9UMS4 (Pre-mRNA-processing factor 19 OS=Homo sapiens OX=9606 GN=PRPF19 PE=1 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 1.5e-100
Identity = 209/478 (43.72%), Postives = 296/478 (61.92%), Query Frame = 0


Query: 45  LVNLSGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKP 104
           + ++S E+PE P VS  S  ++E+RLIE++I + G  P+  +PLS + ++ IK    ++P
Sbjct: 4   ICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHPIRP 63

Query: 105 R--QAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKE 164
           +   A SIP +L   Q+EWD ++L +F L QQL T RQELSHALYQHDAACRVIARL KE
Sbjct: 64  KPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKE 123

Query: 165 RDEARSLLAQAERQMPL--SSTSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVI 224
              AR  LA  + Q  L       SS  + V        E  +LG        G++  +I
Sbjct: 124 VTAAREALATLKPQAGLIVPQAVPSSQPSVVG-----AGEPMDLGE-----LVGMTPEII 183

Query: 225 SELTDCNAALSQQRKRR--QIPPTLVPVEALESYTQISSH-PLHKTSKPGIISLDI-HHE 284
            +L D    L+ +RK+R   +P  LV  E L  Y Q++SH  LH  S PGI++LD+   +
Sbjct: 184 QKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSD 243

Query: 285 KDVIATGGLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQ 344
            + I TGG D N V+F +SS +IL+TL GH+KKVTSV F    DL  + S D T+R+W  
Sbjct: 244 TNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQDLVFSASPDATIRIWSV 303

Query: 345 SDDGNYNCRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSQT 404
               N +C  +++ H + V  +++HAT ++ +++S D  W F ++ +G  LT+V +++  
Sbjct: 304 P---NASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSG 363

Query: 405 EGYTSAAFHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATA 464
              T A FHPDGLI GTGT ++ +KIWD+K + NVA F GH G +T+I+FSENGY+LATA
Sbjct: 364 CSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATA 423

Query: 465 AHD-GVKLWDLRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIREGNLSKIWT 514
           A D  VKLWDLRKLKNF+T    D+     S+ FD SG+YLA+ G+D+ +  + K WT
Sbjct: 424 ADDSSVKLWDLRKLKNFKTL-QLDNNFEVKSLIFDQSGTYLALGGTDV-QIYICKQWT 466

[Close]

BLAST of CaUC05G083350 vs. ExPASy Swiss-Prot
Match: Q08E38 (Pre-mRNA-processing factor 19 OS=Bos taurus OX=9913 GN=PRPF19 PE=2 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 4.5e-100
Identity = 208/478 (43.51%), Postives = 296/478 (61.92%), Query Frame = 0


Query: 45  LVNLSGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKP 104
           + ++S E+PE P VS  S  ++E+RLIE++I + G  P+  +PLS + ++ IK    ++P
Sbjct: 4   ICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHPIRP 63

Query: 105 R--QAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKE 164
           +   A SIP +L   Q+EWD ++L +F L QQL T RQELSHALYQHDAACRVIARL KE
Sbjct: 64  KPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKE 123

Query: 165 RDEARSLLAQAERQMPL--SSTSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVI 224
              AR  LA  + Q  L       SS  + V        E  +LG        G++  +I
Sbjct: 124 VTAAREALATLKPQAGLIVPQAVPSSQPSVVG-----AGEPMDLGE-----LVGMTPEII 183

Query: 225 SELTDCNAALSQQRKRR--QIPPTLVPVEALESYTQISSH-PLHKTSKPGIISLDI-HHE 284
            +L D    L+ +RK+R   +P  LV  E L  Y Q++SH  LH  S PGI++LD+   +
Sbjct: 184 QKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSD 243

Query: 285 KDVIATGGLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQ 344
            + I TGG D N V+F +SS +IL+TL GH+KKVTSV F    +L  + S D T+R+W  
Sbjct: 244 TNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSV 303

Query: 345 SDDGNYNCRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSQT 404
               N +C  +++ H + V  +++HAT ++ +++S D  W F ++ +G  LT+V +++  
Sbjct: 304 P---NASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSG 363

Query: 405 EGYTSAAFHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATA 464
              T A FHPDGLI GTGT ++ +KIWD+K + NVA F GH G +T+I+FSENGY+LATA
Sbjct: 364 CSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATA 423

Query: 465 AHD-GVKLWDLRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIREGNLSKIWT 514
           A D  VKLWDLRKLKNF+T    D+     S+ FD SG+YLA+ G+D+ +  + K WT
Sbjct: 424 ADDSSVKLWDLRKLKNFKTL-QLDNNFEVKSLIFDQSGTYLALGGTDV-QIYICKQWT 466

[Close]

BLAST of CaUC05G083350 vs. ExPASy TrEMBL
Match: A0A5D3D0U3 (Pre-mRNA-processing factor 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002000 PE=3 SV=1)

HSP 1 Score: 921.0 bits (2379), Expect = 3.0e-264
Identity = 471/517 (91.10%), Postives = 482/517 (93.23%), Query Frame = 0


Query: 15  PSPLRLVLPVADCPNVAVRCRGKSCSAATALVN----------LSGEIPEEPVVSKNSGL 74
           PSPLRL LP      VAV C G SCSAA ALVN          +SGEIPEEPVVS+NSGL
Sbjct: 33  PSPLRLELP------VAVHCLGISCSAAAALVNRISPAKMNCSISGEIPEEPVVSRNSGL 92

Query: 75  LFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQAASIPGMLGMFQNEWDVL 134
           LFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQAASIPGMLGMFQNEWDVL
Sbjct: 93  LFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQAASIPGMLGMFQNEWDVL 152

Query: 135 VLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQAERQMPLSSTSF 194
           VLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQAERQMPLSSTSF
Sbjct: 153 VLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQAERQMPLSSTSF 212

Query: 195 SSNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTDCNAALSQQRKRRQIPPTLV 254
           SSNA AVNVNGKRVNEDEELGPDGKKIRPGIS TVISELT+CNAALSQQRKRRQIP TLV
Sbjct: 213 SSNAGAVNVNGKRVNEDEELGPDGKKIRPGISDTVISELTECNAALSQQRKRRQIPATLV 272

Query: 255 PVEALESYTQISSHPLHKTSKPGIISLDIHHEKDVIATGGLDTNAVLFGRSSGEILSTLS 314
           PVEALE+YTQISSHPLHKTSKPGI+SLDIHHEKDVIATGGLDTNAVLFGRSSGEILSTLS
Sbjct: 273 PVEALENYTQISSHPLHKTSKPGILSLDIHHEKDVIATGGLDTNAVLFGRSSGEILSTLS 332

Query: 315 GHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRHILKDHTAEVQAVTVHATN 374
           GHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRHILKDHTAEVQAVTVHATN
Sbjct: 333 GHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRHILKDHTAEVQAVTVHATN 392

Query: 375 NFFVTASLDNTWCFYELASGLCLTQVAEDSQTEGYTSAAFHPDGLILGTGTSEALVKIWD 434
           +FFVTASLDNTWCFYELASGLCLTQVAEDS+TEGYTSAAFHPDGLILGTGTSEALVKIWD
Sbjct: 393 DFFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAAFHPDGLILGTGTSEALVKIWD 452

Query: 435 VKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDLRKLKNFRTFAPYDSETPT 494
           VKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDLRKLKNFRTFAPYDS+TPT
Sbjct: 453 VKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDLRKLKNFRTFAPYDSDTPT 512

Query: 495 NSVDFDHSGSYLAIAGSDIREGNLSKI---WTGCKIL 519
           NSVDFDHSGSYLAIAGSDIR   ++ +   W   K L
Sbjct: 513 NSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTL 543

[Close]

BLAST of CaUC05G083350 vs. ExPASy TrEMBL
Match: A0A5A7U025 (Pre-mRNA-processing factor 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G004530 PE=3 SV=1)

HSP 1 Score: 906.4 bits (2341), Expect = 7.6e-260
Identity = 471/544 (86.58%), Postives = 482/544 (88.60%), Query Frame = 0


Query: 15  PSPLRLVLPVADCPNVAVRCRGKSCSAATALVN----------LSGEIPEEPVVSKNSGL 74
           PSPLRL LP      VAV C G SCSAA ALVN          +SGEIPEEPVVS+NSGL
Sbjct: 33  PSPLRLELP------VAVHCLGISCSAAAALVNRISPAKMNCSISGEIPEEPVVSRNSGL 92

Query: 75  LFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQAASIPGMLGMFQNEWDVL 134
           LFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQAASIPGMLGMFQNEWDVL
Sbjct: 93  LFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQAASIPGMLGMFQNEWDVL 152

Query: 135 VLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQAERQMPLSSTSF 194
           VLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQAERQMPLSSTSF
Sbjct: 153 VLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQAERQMPLSSTSF 212

Query: 195 SSNAAAVNVNGKR---------------------------VNEDEELGPDGKKIRPGISA 254
           SSNA AVNVNGKR                           VNEDEELGPDGKKIRPGIS 
Sbjct: 213 SSNAGAVNVNGKRGLASESSISMDFHEFLCSNLSRFFILSVNEDEELGPDGKKIRPGISD 272

Query: 255 TVISELTDCNAALSQQRKRRQIPPTLVPVEALESYTQISSHPLHKTSKPGIISLDIHHEK 314
           TVISELT+CNAALSQQRKRRQIP TLVPVEALE+YTQISSHPLHKTSKPGI+SLDIHHEK
Sbjct: 273 TVISELTECNAALSQQRKRRQIPATLVPVEALENYTQISSHPLHKTSKPGILSLDIHHEK 332

Query: 315 DVIATGGLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQS 374
           DVIATGGLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQS
Sbjct: 333 DVIATGGLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQS 392

Query: 375 DDGNYNCRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSQTE 434
           DDGNYNCRHILKDHTAEVQAVTVHATN+FFVTASLDNTWCFYELASGLCLTQVAEDS+TE
Sbjct: 393 DDGNYNCRHILKDHTAEVQAVTVHATNDFFVTASLDNTWCFYELASGLCLTQVAEDSETE 452

Query: 435 GYTSAAFHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAA 494
           GYTSAAFHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAA
Sbjct: 453 GYTSAAFHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAA 512

Query: 495 HDGVKLWDLRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIREGNLSKI---WTG 519
           HDGVKLWDLRKLKNFRTFAPYDS+TPTNSVDFDHSGSYLAIAGSDIR   ++ +   W  
Sbjct: 513 HDGVKLWDLRKLKNFRTFAPYDSDTPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNC 570

[Close]

BLAST of CaUC05G083350 vs. ExPASy TrEMBL
Match: A0A1S3AWF5 (Pre-mRNA-processing factor 19 OS=Cucumis melo OX=3656 GN=LOC103483553 PE=3 SV=1)

HSP 1 Score: 896.0 bits (2314), Expect = 1.0e-256
Identity = 449/475 (94.53%), Postives = 461/475 (97.05%), Query Frame = 0


Query: 47  NLSGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQ 106
           ++SGEIPEEPVVS+NSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQ
Sbjct: 4   SISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQ 63

Query: 107 AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA 166
           AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA
Sbjct: 64  AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA 123

Query: 167 RSLLAQAERQMPLSSTSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTDC 226
           RSLLAQAERQMPLSSTSFSSNA AVNVNGKRVNEDEELGPDGKKIRPGIS TVISELT+C
Sbjct: 124 RSLLAQAERQMPLSSTSFSSNAGAVNVNGKRVNEDEELGPDGKKIRPGISDTVISELTEC 183

Query: 227 NAALSQQRKRRQIPPTLVPVEALESYTQISSHPLHKTSKPGIISLDIHHEKDVIATGGLD 286
           NAALSQQRKRRQIP TLVPVEALE+YTQISSHPLHKTSKPGI+SLDIHHEKDVIATGGLD
Sbjct: 184 NAALSQQRKRRQIPATLVPVEALENYTQISSHPLHKTSKPGILSLDIHHEKDVIATGGLD 243

Query: 287 TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRH 346
           TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRH
Sbjct: 244 TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRH 303

Query: 347 ILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSQTEGYTSAAFHP 406
           ILKDHTAEVQAVTVHATN+FFVTASLDNTWCFYELASGLCLTQVAEDS+TEGYTSAAFHP
Sbjct: 304 ILKDHTAEVQAVTVHATNDFFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAAFHP 363

Query: 407 DGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDL 466
           DGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDL
Sbjct: 364 DGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDL 423

Query: 467 RKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIREGNLSKI---WTGCKIL 519
           RKLKNFRTFAPYDS+TPTNSVDFDHSGSYLAIAGSDIR   ++ +   W   K L
Sbjct: 424 RKLKNFRTFAPYDSDTPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTL 478

[Close]

BLAST of CaUC05G083350 vs. ExPASy TrEMBL
Match: A0A0A0L6Z6 (Pre-mRNA-processing factor 19 OS=Cucumis sativus OX=3659 GN=Csa_3G134680 PE=3 SV=1)

HSP 1 Score: 892.5 bits (2305), Expect = 1.1e-255
Identity = 448/475 (94.32%), Postives = 460/475 (96.84%), Query Frame = 0


Query: 47  NLSGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQ 106
           ++SGEIPEEPVVS+NSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQ
Sbjct: 4   SISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQ 63

Query: 107 AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA 166
           AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA
Sbjct: 64  AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA 123

Query: 167 RSLLAQAERQMPLSSTSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTDC 226
           RSLLA AERQMPLSSTSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGIS  VISELT+C
Sbjct: 124 RSLLALAERQMPLSSTSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISDAVISELTEC 183

Query: 227 NAALSQQRKRRQIPPTLVPVEALESYTQISSHPLHKTSKPGIISLDIHHEKDVIATGGLD 286
           NAALSQQRKRRQIP TLVPVEALE+YTQISSHPLHKTSKPGI+SLDIHHEKDVIATGGLD
Sbjct: 184 NAALSQQRKRRQIPATLVPVEALENYTQISSHPLHKTSKPGIMSLDIHHEKDVIATGGLD 243

Query: 287 TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRH 346
           TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRH
Sbjct: 244 TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRH 303

Query: 347 ILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSQTEGYTSAAFHP 406
           ILKDHTAEVQAVTVHATN+FFVTASLDNTWCFYELASGLCLTQVAEDS+TEGYTSAAFHP
Sbjct: 304 ILKDHTAEVQAVTVHATNDFFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAAFHP 363

Query: 407 DGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDL 466
           DGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDL
Sbjct: 364 DGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDL 423

Query: 467 RKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIREGNLSKI---WTGCKIL 519
           RKLKNFRTFAPYDS+TPTNSVDFDHSGSYLAIAGSDIR   ++ +   W   K L
Sbjct: 424 RKLKNFRTFAPYDSDTPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTL 478

[Close]

BLAST of CaUC05G083350 vs. ExPASy TrEMBL
Match: A0A6J1FIG8 (Pre-mRNA-processing factor 19 OS=Cucurbita moschata OX=3662 GN=LOC111445620 PE=3 SV=1)

HSP 1 Score: 884.8 bits (2285), Expect = 2.4e-253
Identity = 444/458 (96.94%), Postives = 453/458 (98.91%), Query Frame = 0


Query: 47  NLSGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQ 106
           ++SGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQ
Sbjct: 4   SISGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQ 63

Query: 107 AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA 166
           AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA
Sbjct: 64  AASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEA 123

Query: 167 RSLLAQAERQMPLSSTSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTDC 226
           RSLLAQAERQMPLSSTS SSN AAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTDC
Sbjct: 124 RSLLAQAERQMPLSSTSISSN-AAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTDC 183

Query: 227 NAALSQQRKRRQIPPTLVPVEALESYTQISSHPLHKTSKPGIISLDIHHEKDVIATGGLD 286
           NA+LSQQRK+RQIPPTLVPVEALESYTQISSHPLHKT+KPGIISLDI+HEKDVIATGGLD
Sbjct: 184 NASLSQQRKKRQIPPTLVPVEALESYTQISSHPLHKTNKPGIISLDINHEKDVIATGGLD 243

Query: 287 TNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRH 346
           TNAVLFGRSSGEILSTLSGHSKKVTSVKFV RDDLFLTGSADKTVRVWQ SDDGNYNCRH
Sbjct: 244 TNAVLFGRSSGEILSTLSGHSKKVTSVKFVTRDDLFLTGSADKTVRVWQPSDDGNYNCRH 303

Query: 347 ILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSQTEGYTSAAFHP 406
           ILKDHTAEVQAVTVHATNNFFVTASLDNTWCFY+LASGLCLTQVAEDS TEGYTSAAFHP
Sbjct: 304 ILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYDLASGLCLTQVAEDSGTEGYTSAAFHP 363

Query: 407 DGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDL 466
           DGLILGTGTSEALVKIWDVKSQKNVA+FDGHVGAVTAISFSENGYFLATAAHDGVKLWDL
Sbjct: 364 DGLILGTGTSEALVKIWDVKSQKNVARFDGHVGAVTAISFSENGYFLATAAHDGVKLWDL 423

Query: 467 RKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIR 505
           RKLKNFRTFAPYDSETPTNSV+FDHSGSYLAIAGSDIR
Sbjct: 424 RKLKNFRTFAPYDSETPTNSVEFDHSGSYLAIAGSDIR 460

[Close]

BLAST of CaUC05G083350 vs. TAIR 10
Match: AT1G04510.2 (MOS4-associated complex 3A )

HSP 1 Score: 676.8 bits (1745), Expect = 1.9e-194
Identity = 346/489 (70.76%), Postives = 402/489 (82.21%), Query Frame = 0


Query: 48  LSGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPR-- 107
           +SGE+PEEPVVSK SGLL+EKRLI+ HI DYGKCPVTGEP ++DDIVPIKTGKIVKP+  
Sbjct: 5   ISGEVPEEPVVSKKSGLLYEKRLIQTHISDYGKCPVTGEPHTLDDIVPIKTGKIVKPKPL 64

Query: 108 QAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDE 167
             ASIPG+LG FQ EWD L+LSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDE
Sbjct: 65  HTASIPGLLGTFQTEWDSLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDE 124

Query: 168 ARSLLAQAERQMPLSSTSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTD 227
           +R LLA+AERQ+P +    +SNAA    NGKR  +D E GP+ KK+R GISA VI+ELTD
Sbjct: 125 SRQLLAEAERQLPAAPEVATSNAAL--SNGKRGIDDGEQGPNAKKMRLGISAEVITELTD 184

Query: 228 CNAALSQQRKRRQIPPTLVPVEALESYTQISSHPLHKTSKPGIISLDIHHEKDVIATGGL 287
           CNAALSQQRK+RQIP TL  V+ALE +TQ+SSHPLHKT+KPGI S+DI H KDVIATGG+
Sbjct: 185 CNAALSQQRKKRQIPKTLASVDALEKFTQLSSHPLHKTNKPGIFSMDILHSKDVIATGGI 244

Query: 288 DTNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCR 347
           DT AVLF R SG+ILSTL+GHSKKVTS+KFVG  DL LT S+DKTVR+W  S+DGNY  R
Sbjct: 245 DTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSR 304

Query: 348 HILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSQTE-GYTSAAF 407
           H LKDH+AEV+AVTVHATN +FV+ASLD+TWCFY+L+SGLCL QV + S+ +  YT+AAF
Sbjct: 305 HTLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTAAAF 364

Query: 408 HPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLW 467
           HPDGLILGTGT++++VKIWDVKSQ NVAKF GH G +T+ISFSENGYFLATAA DGV+LW
Sbjct: 365 HPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALDGVRLW 424

Query: 468 DLRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIREGNLSKI---WTGCKILGSR 527
           DLRKLKNFRTF   D+    NSV+FDHSGSYL IA SDIR    + +   W   K L   
Sbjct: 425 DLRKLKNFRTFDFPDA----NSVEFDHSGSYLGIAASDIRVFQAASVKAEWNPIKTLPDL 484

Query: 528 VNGSKSSNL 531
               KS+++
Sbjct: 485 SGTGKSTSV 487

[Close]

BLAST of CaUC05G083350 vs. TAIR 10
Match: AT1G04510.1 (MOS4-associated complex 3A )

HSP 1 Score: 675.6 bits (1742), Expect = 4.2e-194
Identity = 345/489 (70.55%), Postives = 402/489 (82.21%), Query Frame = 0


Query: 48  LSGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPR-- 107
           +SGE+PEEPVVSK SGLL+EKRLI+ HI DYGKCPVTGEP ++DDIVPIKTGKIVKP+  
Sbjct: 5   ISGEVPEEPVVSKKSGLLYEKRLIQTHISDYGKCPVTGEPHTLDDIVPIKTGKIVKPKPL 64

Query: 108 QAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDE 167
             ASIPG+LG FQ EWD L+LSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDE
Sbjct: 65  HTASIPGLLGTFQTEWDSLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDE 124

Query: 168 ARSLLAQAERQMPLSSTSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTD 227
           +R LLA+AERQ+P +    +SNAA    NGKR  +D E GP+ KK+R GISA VI+ELTD
Sbjct: 125 SRQLLAEAERQLPAAPEVATSNAAL--SNGKRGIDDGEQGPNAKKMRLGISAEVITELTD 184

Query: 228 CNAALSQQRKRRQIPPTLVPVEALESYTQISSHPLHKTSKPGIISLDIHHEKDVIATGGL 287
           CNAALSQQRK+RQIP TL  V+ALE +TQ+SSHPLHKT+KPGI S+DI H KDVIATGG+
Sbjct: 185 CNAALSQQRKKRQIPKTLASVDALEKFTQLSSHPLHKTNKPGIFSMDILHSKDVIATGGI 244

Query: 288 DTNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCR 347
           DT AVLF R SG+ILSTL+GHSKKVTS+KFVG  DL LT S+DKTVR+W  S+DGNY  R
Sbjct: 245 DTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSR 304

Query: 348 HILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSQTE-GYTSAAF 407
           H LKDH+AEV+AVTVHATN +FV+ASLD+TWCFY+L+SGLCL QV + S+ +  YT+AAF
Sbjct: 305 HTLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTAAAF 364

Query: 408 HPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLW 467
           HPDGLILGTGT++++VKIWDVKSQ NVAKF GH G +T+ISFSENGYFLATAA DGV+LW
Sbjct: 365 HPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALDGVRLW 424

Query: 468 DLRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIREGNLSKI---WTGCKILGSR 527
           DLRKLKNFRTF   D+    NSV+FDHSGSYL IA SDIR    + +   W   K L   
Sbjct: 425 DLRKLKNFRTFDFPDA----NSVEFDHSGSYLGIAASDIRVFQAASVKAEWNPIKTLPDL 484

Query: 528 VNGSKSSNL 531
               K++++
Sbjct: 485 SGTGKATSV 487

[Close]

BLAST of CaUC05G083350 vs. TAIR 10
Match: AT2G33340.1 (MOS4-associated complex 3B )

HSP 1 Score: 673.3 bits (1736), Expect = 2.1e-193
Identity = 334/459 (72.77%), Postives = 387/459 (84.31%), Query Frame = 0


Query: 48  LSGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPR-- 107
           +SGE+P EPVVS  SGLLFE+RLIERHI DYGKCPVTGEPL+IDDIVPIKTG+I+KP+  
Sbjct: 5   ISGEVPVEPVVSTKSGLLFERRLIERHISDYGKCPVTGEPLTIDDIVPIKTGEIIKPKTL 64

Query: 108 QAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDE 167
             ASIPG+LG FQNEWD L+LSNFALEQQLHTARQELSHALYQHD+ACRVIARLKKERDE
Sbjct: 65  HTASIPGLLGTFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDSACRVIARLKKERDE 124

Query: 168 ARSLLAQAERQMPLSSTSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTD 227
           AR LLA+ ER +P +  + ++NAA    NGKR   DEELGPD KK+ PGISA +I+ELTD
Sbjct: 125 ARQLLAEVERHIPAAPEAVTANAAL--SNGKRAAVDEELGPDAKKLCPGISAEIITELTD 184

Query: 228 CNAALSQQRKRRQIPPTLVPVEALESYTQISSHPLHKTSKPGIISLDIHHEKDVIATGGL 287
           CNAALSQ+RK+RQIP TL  ++ LE +TQ+SSHPLHKT+KPGI S+DI H KDVIATGG+
Sbjct: 185 CNAALSQKRKKRQIPQTLASIDTLERFTQLSSHPLHKTNKPGICSMDILHSKDVIATGGV 244

Query: 288 DTNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCR 347
           D  AVLF R SG+ILSTL+GHSKKVTSVKFVG  DL LT SADKTVR+W+   DGNY C 
Sbjct: 245 DATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACG 304

Query: 348 HILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSQTEGYTSAAFH 407
           + L DH+AEV+AVTVH TN +FV+ASLD TWCFY+L+SG CL QV++DS+   YT+AAFH
Sbjct: 305 YTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFH 364

Query: 408 PDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWD 467
           PDGLILGTGTS+++VKIWDVKSQ NVAKFDGH G VTAISFSENGYFLATAA DGV+LWD
Sbjct: 365 PDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGVRLWD 424

Query: 468 LRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIR 505
           LRKL+NF++F   D+    NSV+FD SGSYL IA SDI+
Sbjct: 425 LRKLRNFKSFLSADA----NSVEFDPSGSYLGIAASDIK 457

[Close]

BLAST of CaUC05G083350 vs. TAIR 10
Match: AT2G33340.2 (MOS4-associated complex 3B )

HSP 1 Score: 673.3 bits (1736), Expect = 2.1e-193
Identity = 334/459 (72.77%), Postives = 387/459 (84.31%), Query Frame = 0


Query: 48  LSGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPR-- 107
           +SGE+P EPVVS  SGLLFE+RLIERHI DYGKCPVTGEPL+IDDIVPIKTG+I+KP+  
Sbjct: 5   ISGEVPVEPVVSTKSGLLFERRLIERHISDYGKCPVTGEPLTIDDIVPIKTGEIIKPKTL 64

Query: 108 QAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDE 167
             ASIPG+LG FQNEWD L+LSNFALEQQLHTARQELSHALYQHD+ACRVIARLKKERDE
Sbjct: 65  HTASIPGLLGTFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDSACRVIARLKKERDE 124

Query: 168 ARSLLAQAERQMPLSSTSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTD 227
           AR LLA+ ER +P +  + ++NAA    NGKR   DEELGPD KK+ PGISA +I+ELTD
Sbjct: 125 ARQLLAEVERHIPAAPEAVTANAAL--SNGKRAAVDEELGPDAKKLCPGISAEIITELTD 184

Query: 228 CNAALSQQRKRRQIPPTLVPVEALESYTQISSHPLHKTSKPGIISLDIHHEKDVIATGGL 287
           CNAALSQ+RK+RQIP TL  ++ LE +TQ+SSHPLHKT+KPGI S+DI H KDVIATGG+
Sbjct: 185 CNAALSQKRKKRQIPQTLASIDTLERFTQLSSHPLHKTNKPGICSMDILHSKDVIATGGV 244

Query: 288 DTNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCR 347
           D  AVLF R SG+ILSTL+GHSKKVTSVKFVG  DL LT SADKTVR+W+   DGNY C 
Sbjct: 245 DATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACG 304

Query: 348 HILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSQTEGYTSAAFH 407
           + L DH+AEV+AVTVH TN +FV+ASLD TWCFY+L+SG CL QV++DS+   YT+AAFH
Sbjct: 305 YTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFH 364

Query: 408 PDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWD 467
           PDGLILGTGTS+++VKIWDVKSQ NVAKFDGH G VTAISFSENGYFLATAA DGV+LWD
Sbjct: 365 PDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGVRLWD 424

Query: 468 LRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIR 505
           LRKL+NF++F   D+    NSV+FD SGSYL IA SDI+
Sbjct: 425 LRKLRNFKSFLSADA----NSVEFDPSGSYLGIAASDIK 457

[Close]

BLAST of CaUC05G083350 vs. TAIR 10
Match: AT2G33340.3 (MOS4-associated complex 3B )

HSP 1 Score: 673.3 bits (1736), Expect = 2.1e-193
Identity = 334/459 (72.77%), Postives = 387/459 (84.31%), Query Frame = 0


Query: 48  LSGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPR-- 107
           +SGE+P EPVVS  SGLLFE+RLIERHI DYGKCPVTGEPL+IDDIVPIKTG+I+KP+  
Sbjct: 5   ISGEVPVEPVVSTKSGLLFERRLIERHISDYGKCPVTGEPLTIDDIVPIKTGEIIKPKTL 64

Query: 108 QAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDE 167
             ASIPG+LG FQNEWD L+LSNFALEQQLHTARQELSHALYQHD+ACRVIARLKKERDE
Sbjct: 65  HTASIPGLLGTFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDSACRVIARLKKERDE 124

Query: 168 ARSLLAQAERQMPLSSTSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTD 227
           AR LLA+ ER +P +  + ++NAA    NGKR   DEELGPD KK+ PGISA +I+ELTD
Sbjct: 125 ARQLLAEVERHIPAAPEAVTANAAL--SNGKRAAVDEELGPDAKKLCPGISAEIITELTD 184

Query: 228 CNAALSQQRKRRQIPPTLVPVEALESYTQISSHPLHKTSKPGIISLDIHHEKDVIATGGL 287
           CNAALSQ+RK+RQIP TL  ++ LE +TQ+SSHPLHKT+KPGI S+DI H KDVIATGG+
Sbjct: 185 CNAALSQKRKKRQIPQTLASIDTLERFTQLSSHPLHKTNKPGICSMDILHSKDVIATGGV 244

Query: 288 DTNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCR 347
           D  AVLF R SG+ILSTL+GHSKKVTSVKFVG  DL LT SADKTVR+W+   DGNY C 
Sbjct: 245 DATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACG 304

Query: 348 HILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSQTEGYTSAAFH 407
           + L DH+AEV+AVTVH TN +FV+ASLD TWCFY+L+SG CL QV++DS+   YT+AAFH
Sbjct: 305 YTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFH 364

Query: 408 PDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWD 467
           PDGLILGTGTS+++VKIWDVKSQ NVAKFDGH G VTAISFSENGYFLATAA DGV+LWD
Sbjct: 365 PDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGVRLWD 424

Query: 468 LRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIR 505
           LRKL+NF++F   D+    NSV+FD SGSYL IA SDI+
Sbjct: 425 LRKLRNFKSFLSADA----NSVEFDPSGSYLGIAASDIK 457

The following BLAST results are available for this feature:

BLAST of CaUC05G083350 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK17345.1	6.1e-264	91.10	pre-mRNA-processing factor 19 [Cucumis melo var. makuwa]	[more]
KAA0049213.1	1.6e-259	86.58	pre-mRNA-processing factor 19 [Cucumis melo var. makuwa]	[more]
XP_038891633.1	3.8e-258	98.47	pre-mRNA-processing factor 19 [Benincasa hispida]	[more]
XP_008438467.1	2.1e-256	94.53	PREDICTED: pre-mRNA-processing factor 19 [Cucumis melo]	[more]
XP_004134043.1	2.3e-255	94.32	pre-mRNA-processing factor 19 [Cucumis sativus]	[more]

BLAST of CaUC05G083350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9AV81	6.3e-203	71.72	Pre-mRNA-processing factor 19 OS=Oryza sativa subsp. japonica OX=39947 GN=PRP19 ...	[more]
Q94BR4	5.9e-193	70.55	Pre-mRNA-processing factor 19 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=PRP19...	[more]
O22785	2.9e-192	72.77	Pre-mRNA-processing factor 19 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=PRP19...	[more]
Q9UMS4	1.5e-100	43.72	Pre-mRNA-processing factor 19 OS=Homo sapiens OX=9606 GN=PRPF19 PE=1 SV=1	[more]
Q08E38	4.5e-100	43.51	Pre-mRNA-processing factor 19 OS=Bos taurus OX=9913 GN=PRPF19 PE=2 SV=1	[more]

BLAST of CaUC05G083350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D0U3	3.0e-264	91.10	Pre-mRNA-processing factor 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5A7U025	7.6e-260	86.58	Pre-mRNA-processing factor 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A1S3AWF5	1.0e-256	94.53	Pre-mRNA-processing factor 19 OS=Cucumis melo OX=3656 GN=LOC103483553 PE=3 SV=1	[more]
A0A0A0L6Z6	1.1e-255	94.32	Pre-mRNA-processing factor 19 OS=Cucumis sativus OX=3659 GN=Csa_3G134680 PE=3 SV...	[more]
A0A6J1FIG8	2.4e-253	96.94	Pre-mRNA-processing factor 19 OS=Cucurbita moschata OX=3662 GN=LOC111445620 PE=3...	[more]

BLAST of CaUC05G083350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04510.2	1.9e-194	70.76	MOS4-associated complex 3A	[more]
AT1G04510.1	4.2e-194	70.55	MOS4-associated complex 3A	[more]
AT2G33340.1	2.1e-193	72.77	MOS4-associated complex 3B	[more]
AT2G33340.2	2.1e-193	72.77	MOS4-associated complex 3B	[more]
AT2G33340.3	2.1e-193	72.77	MOS4-associated complex 3B	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 156..176
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 303..335 score: 11.919224
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 392..427 score: 8.702878
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 434..467 score: 8.65015
None	No IPR available	CDD	cd00200	WD40	coord: 267..512 e-value: 1.11932E-43 score: 157.112
None	No IPR available	CDD	cd16656	RING-Ubox_PRP19	coord: 48..97 e-value: 1.7727E-26 score: 100.347
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 48..96
IPR003613	U box domain	SMART	SM00504	Ubox_2	coord: 47..109 e-value: 2.1E-17 score: 73.8
IPR003613	U box domain	PROSITE	PS51698	U_BOX	coord: 48..113 score: 13.146477
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 468..513 e-value: 65.0 score: 5.6 coord: 296..335 e-value: 7.4E-9 score: 45.4 coord: 341..380 e-value: 3.1E-5 score: 33.4 coord: 383..424 e-value: 0.73 score: 17.9 coord: 251..293 e-value: 26.0 score: 8.1 coord: 427..465 e-value: 2.5E-8 score: 43.7
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 429..465 e-value: 0.0013 score: 19.5 coord: 298..334 e-value: 1.3E-6 score: 29.0
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 392..433 score: 11.410742
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 303..335 score: 14.41838
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 434..474 score: 11.009724
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 243..535 e-value: 1.1E-73 score: 249.7
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 45..103 e-value: 3.5E-21 score: 76.6
IPR013915	Pre-mRNA-splicing factor 19	PFAM	PF08606	Prp19	coord: 107..172 e-value: 1.2E-29 score: 102.1
IPR038959	Pre-mRNA-processing factor 19	PANTHER	PTHR43995	PRE-MRNA-PROCESSING FACTOR 19	coord: 29..504
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 265..502

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC05G083350.1	CaUC05G083350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0070534	protein K63-linked ubiquitination
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0000974	Prp19 complex
cellular_component	GO:0071006	U2-type catalytic step 1 spliceosome
molecular_function	GO:0005515	protein binding
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0004842	ubiquitin-protein transferase activity