CaUC05G083310 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC05G083310
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	RING-type E3 ubiquitin transferase
Location	Ciama_Chr05: 3852543 .. 3855031 (-)
RNA-Seq Expression	CaUC05G083310
Synteny	CaUC05G083310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTGCAAAGAGGCTGTAATTTAATTCATCATATTCATTATCATTATTCAGATCAAAGTTCTGCAAATATTTCTTCTAGGATTTTCTCAGCAACCAAACAGTATATACCAAGTAGATACGGAAAGCGAGTAGGAAAATACTTTTAAGAGCATTATCATAATTCATTATAAGAGAAGGGAACCTCGAGAACTGAGAGCCGAAGAAAACCGGCTTGGCGATGGAACTTGGCAATTCACTTTTGAACTGACACGGCGAGAGCACCGAGCAAGGTGGCCTGCTGCAACTCGAGCTCATTGAGCTGCTGTTCATGATCCATCTCGATGATAAGCGGGACAACGAGGATGAGAAATGTGGTGCCGGCGATCCAGGCGGCCTTACCCGTGCTCCGCAACAGCTTATTGGTGACGAATGTGGTATTTGAAGCGGCGCGTTTGGATTGGCGATAGATCGAGGATTCGGATAAGGAACGTGATATCCTGGAAAGAACACCGGCGTCGCCGTCGTCGTCGCTGGTGAGCGACAATCGGTTCTTGCCATTGACCGTCATGAGAGACGCAGAGGGGAACTTTGCTTTCGGGGGATCGAGCGCCAACACTGCTTCAGTTTTGCTTTCACGGAGAATGTGTGNCCCTATGGTTGCCCATATGCTGGTTCAGAATGCTCTGCTGTTGGGGACATTCCTTTCCTTGTTGCCCATCTCAGGGATGATCATAAGGTGGATATGCACACTGGCTGCACATTTAACCATCGCTATGTTAAATCCAATCCAAGGGAAGTGGAGAATGCCACTTGGATGCTTACTGTAAGTCCCATATATTTCACCTCAACTCTCAAGTGGATTCTCATTTTCTCTTTCTTTGGTAACACTTACTTGAATTGATACTTACCTGTGATACATAGACATACATATGCACACGTACGTATGGTTATGTAAATACGTATTTATCCGTTATATAACTCGGTATCTATTAAGGTAAGAGGGAGAGGGAGGGTTTCAAACCCTATCATGAAACTCAGGAGATTAGAAGACTCCAACAAGTTGAAAATAGACTAAAGATGATGAAAAGTCCACTAATACAACAATGCTGCAACTTTGTGTTTGTCTTTTTGTTTTTTGTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGTTTTCGTATTTCAATTTTTAGACCCTTAATTGAGGGTCAATTTCTAATTTCTAACATAAACTTGCTAATTATTTATTTTATTCTCTTTTAAGAATAAATGTTTTCTTTAGTTTTTGTTTCCTCCAAATAAATCTTTAATGAAATGAAATTTTCATCGACTAAGTTCAGCAAATGAGGTATTTCAACGACAAACATGAGCATAGAAAAAAGCCTCAACAACTTCCACGTCTCAAATAAAAAAAATTAAAAAGGTCATATTATATTCTTCTTTCGAGGTCGTTTTGTGTATATTTAGTATATATTTGACATGCTTTATGAAGGATGTTTCCAAGTGAAATTTCTTTTACATTAACACTTTATAACGAAAATTTACCACAAGTTACATCTAAAAATACTGAATCTAGAAGCATTTAAATATTTTTATAATTTTTTTTTACAATTTAAATACAGCTTAACTGATTAAAGGAGTTTGTGAATTTAACACTCAAGAGTATTTTATCTATTTTTTAAAATTGAACCCAACACTGCCCAGTCAAAATTTTTAAAAAGTATTTCAACTTTCAGAGTGGACAACTAGCTAATAGACAAATTCAGAGGTTGGTGGCTAAACCAGACCACAAGGCTAAAAACATAATAAATGTATAACTTAGTAATATAAATCAATTTCTACCAAAAAGCTGATTGTTGAACAATTAATCAATAAGTACAAAACCTCTCTTAATATACTCCAAGCATGAAAATGGCAGCTTTAGAAGATGTTCTACTTCAAGGGATTTGGATATCAGTGTGTTCATTATTGAATCTCGATTAAGATACTCACAGTTCATCTGGAAACCTTTGCACACAACTAGAGATGTATTGCAGACCCATGGAACCGCCACTGTGAATCCCAAACCAGAACTTTTCTCATCTCCCACCAAAACATCCTTGTATGCTCGCCCTATTTGAAATACATACTTCCCCATTGGCAATACATGTTCAAGAACAGATGGGACAGAGCCATCTGGATTCAAGATATTGGAATCCGAGTGAAGATTCACCACAACAGTCCCATGTTTAGGATGAACCCGCTTGCTGAGGGCATCAAGAAATGTGGAATTTGGATCCCAGAGTTTGTGTGGAAATATGTCATCTCCATCATAAGCATCAATGAAGATCATGTCGTATAGATTGGTCGTTTTGCTGATGAAATCCTCTGCATCTAATTCGTAGAGGAAAAGTCTTTCGTGGATGCCTTTCCACATGATGTCATCAATGAATCTAGGTTTGGCAGACGCACGCTCTCCCGATGCTGTCATAACTGAGAAAGCTGGGAAGCCCATGGCTTGA

mRNA sequence

ATGAAGGAACCTCGAGAACTGAGAGCCGAAGAAAACCGGCTTGGCGATGGAACTTGGCAATTCACTTTTGAACTGACACGGCGAGAGCACCGAGCAAGCGGGACAACGAGGATGAGAAATGTGGTGCCGGCGATCCAGGCGGCCTTACCCGTGCTCCGCAACAGCTTATTGGTGACGAATGTGAACACCGGCGTCGCCGTCGTCGTCGCTGGTGAGCGACAATCGGTTCTTGCCATTGACCGTCATGAGAGACGCAGAGGGGAACTTTGCTTTCGGGGGATCGAGCGCCAACACTGCTTCAGTTTTGCTTTCACGGAGAATGTGTGNCCCTATGGTTGCCCATATGCTGGTTCAGAATGCTCTGCTGTTGGGGACATTCCTTTCCTTGTTGCCCATCTCAGGGATGATCATAAGGTGGATATGCACACTGGCTGCACATTTAACCATCGCTATGTTAAATCCAATCCAAGGGAAGTGGAGAATGCCACTTGGATGCTTACTAGTGGACAACTAGCTAATAGACAAATTCAGAGGTTGGTGGCTAAACCAGACCACAAGGCTAAAAACATAATAAATTTCATCTGGAAACCTTTGCACACAACTAGAGATGTATTGCAGACCCATGGAACCGCCACTGTGAATCCCAAACCAGAACTTTTCTCATCTCCCACCAAAACATCCTTATGGGACAGAGCCATCTGGATTCAAGATATTGGAATCCGAGTGAAGATTCACCACAACAGTCCCATGTTTAGGATGAACCCGCTTGCTGAGGGCATCAAGAAATGTGGAATTTGGATCCCAGAGTTTGTGTGGAAATATGTCATCTCCATCATAAGCATCAATGAAGATCATGTCAGGAAAAGTCTTTCGTGGATGCCTTTCCACATGATGTCATCAATGAATCTAGGTTTGGCAGACGCACGCTCTCCCGATGCTGTCATAACTGAGAAAGCTGGGAAGCCCATGGCTTGA

Coding sequence (CDS)

ATGAAGGAACCTCGAGAACTGAGAGCCGAAGAAAACCGGCTTGGCGATGGAACTTGGCAATTCACTTTTGAACTGACACGGCGAGAGCACCGAGCAAGCGGGACAACGAGGATGAGAAATGTGGTGCCGGCGATCCAGGCGGCCTTACCCGTGCTCCGCAACAGCTTATTGGTGACGAATGTGAACACCGGCGTCGCCGTCGTCGTCGCTGGTGAGCGACAATCGGTTCTTGCCATTGACCGTCATGAGAGACGCAGAGGGGAACTTTGCTTTCGGGGGATCGAGCGCCAACACTGCTTCAGTTTTGCTTTCACGGAGAATGTGTGNCCCTATGGTTGCCCATATGCTGGTTCAGAATGCTCTGCTGTTGGGGACATTCCTTTCCTTGTTGCCCATCTCAGGGATGATCATAAGGTGGATATGCACACTGGCTGCACATTTAACCATCGCTATGTTAAATCCAATCCAAGGGAAGTGGAGAATGCCACTTGGATGCTTACTAGTGGACAACTAGCTAATAGACAAATTCAGAGGTTGGTGGCTAAACCAGACCACAAGGCTAAAAACATAATAAATTTCATCTGGAAACCTTTGCACACAACTAGAGATGTATTGCAGACCCATGGAACCGCCACTGTGAATCCCAAACCAGAACTTTTCTCATCTCCCACCAAAACATCCTTATGGGACAGAGCCATCTGGATTCAAGATATTGGAATCCGAGTGAAGATTCACCACAACAGTCCCATGTTTAGGATGAACCCGCTTGCTGAGGGCATCAAGAAATGTGGAATTTGGATCCCAGAGTTTGTGTGGAAATATGTCATCTCCATCATAAGCATCAATGAAGATCATGTCAGGAAAAGTCTTTCGTGGATGCCTTTCCACATGATGTCATCAATGAATCTAGGTTTGGCAGACGCACGCTCTCCCGATGCTGTCATAACTGAGAAAGCTGGGAAGCCCATGGCTTGA

Protein sequence

MKEPRELRAEENRLGDGTWQFTFELTRREHRASGTTRMRNVVPAIQAALPVLRNSLLVTNVNTGVAVVVAGERQSVLAIDRHERRRGELCFRGIERQHCFSFAFTENVXPYGCPYAGSECSAVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTSGQLANRQIQRLVAKPDHKAKNIINFIWKPLHTTRDVLQTHGTATVNPKPELFSSPTKTSLWDRAIWIQDIGIRVKIHHNSPMFRMNPLAEGIKKCGIWIPEFVWKYVISIISINEDHVRKSLSWMPFHMMSSMNLGLADARSPDAVITEKAGKPMA

Homology

[Close]

BLAST of CaUC05G083310 vs. NCBI nr
Match: KAF1893457.1 (hypothetical protein Lal_00001935 [Lupinus albus])

HSP 1 Score: 133.7 bits (335), Expect = 2.9e-27
Identity = 58/61 (95.08%), Postives = 58/61 (95.08%), Query Frame = 0


Query: 107 NVXPYGCPYAGSECSAVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML 166
           N  PYGCPYAGSECS VGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML
Sbjct: 168 NFRPYGCPYAGSECSVVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML 227

Query: 167 T 168
           T
Sbjct: 228 T 228

[Close]

BLAST of CaUC05G083310 vs. NCBI nr
Match: OIV98006.1 (hypothetical protein TanjilG_21716 [Lupinus angustifolius])

HSP 1 Score: 133.7 bits (335), Expect = 2.9e-27
Identity = 58/61 (95.08%), Postives = 58/61 (95.08%), Query Frame = 0


Query: 107 NVXPYGCPYAGSECSAVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML 166
           N  PYGCPYAGSECS VGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML
Sbjct: 144 NFRPYGCPYAGSECSVVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML 203

Query: 167 T 168
           T
Sbjct: 204 T 204

[Close]

BLAST of CaUC05G083310 vs. NCBI nr
Match: KAE9604015.1 (putative aminoacyltransferase, E1 ubiquitin-activating enzyme [Lupinus albus])

HSP 1 Score: 133.7 bits (335), Expect = 2.9e-27
Identity = 58/61 (95.08%), Postives = 58/61 (95.08%), Query Frame = 0


Query: 107 NVXPYGCPYAGSECSAVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML 166
           N  PYGCPYAGSECS VGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML
Sbjct: 145 NFRPYGCPYAGSECSVVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML 204

Query: 167 T 168
           T
Sbjct: 205 T 205

[Close]

BLAST of CaUC05G083310 vs. NCBI nr
Match: XP_011651326.1 (E3 ubiquitin-protein ligase SINAT5 [Cucumis sativus] >KGN57672.1 hypothetical protein Csa_011027 [Cucumis sativus])

HSP 1 Score: 132.9 bits (333), Expect = 5.0e-27
Identity = 58/61 (95.08%), Postives = 58/61 (95.08%), Query Frame = 0


Query: 107 NVXPYGCPYAGSECSAVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML 166
           N  PY CPYAGSECSAVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML
Sbjct: 153 NYRPYSCPYAGSECSAVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML 212

Query: 167 T 168
           T
Sbjct: 213 T 213

[Close]

BLAST of CaUC05G083310 vs. NCBI nr
Match: KAA0050507.1 (ubiquitin ligase [Cucumis melo var. makuwa] >TYK29184.1 ubiquitin ligase [Cucumis melo var. makuwa])

HSP 1 Score: 132.9 bits (333), Expect = 5.0e-27
Identity = 58/61 (95.08%), Postives = 58/61 (95.08%), Query Frame = 0


Query: 107 NVXPYGCPYAGSECSAVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML 166
           N  PY CPYAGSECSAVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML
Sbjct: 152 NYRPYSCPYAGSECSAVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML 211

Query: 167 T 168
           T
Sbjct: 212 T 212

[Close]

BLAST of CaUC05G083310 vs. ExPASy Swiss-Prot
Match: Q8S3N1 (E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana OX=3702 GN=SINAT5 PE=1 SV=2)

HSP 1 Score: 128.6 bits (322), Expect = 1.2e-28
Identity = 56/61 (91.80%), Postives = 57/61 (93.44%), Query Frame = 0


Query: 107 NVXPYGCPYAGSECSAVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML 166
           N  PY CPYAGSEC+AVGDI FLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML
Sbjct: 128 NFRPYSCPYAGSECAAVGDITFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML 187

Query: 167 T 168
           T
Sbjct: 188 T 188

[Close]

BLAST of CaUC05G083310 vs. ExPASy Swiss-Prot
Match: Q84JL3 (E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana OX=3702 GN=SINAT3 PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.6e-28
Identity = 55/61 (90.16%), Postives = 56/61 (91.80%), Query Frame = 0


Query: 107 NVXPYGCPYAGSECSAVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML 166
           N  PY CPYAGSECS  GDIPFLVAHLRDDHKVDMH+GCTFNHRYVKSNPREVENATWML
Sbjct: 145 NFRPYSCPYAGSECSVTGDIPFLVAHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWML 204

Query: 167 T 168
           T
Sbjct: 205 T 205

[Close]

BLAST of CaUC05G083310 vs. ExPASy Swiss-Prot
Match: Q9STN8 (E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana OX=3702 GN=SINAT4 PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 4.0e-27
Identity = 54/61 (88.52%), Postives = 54/61 (88.52%), Query Frame = 0


Query: 107 NVXPYGCPYAGSECSAVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML 166
           N  PY CPYAGSEC  VGDIPFLVAHLRDDHKVDMH G TFNHRYVKSNPREVENATWML
Sbjct: 146 NFRPYSCPYAGSECGIVGDIPFLVAHLRDDHKVDMHAGSTFNHRYVKSNPREVENATWML 205

Query: 167 T 168
           T
Sbjct: 206 T 206

[Close]

BLAST of CaUC05G083310 vs. ExPASy Swiss-Prot
Match: Q9M2P4 (E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana OX=3702 GN=SINAT2 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 9.9e-26
Identity = 55/79 (69.62%), Postives = 56/79 (70.89%), Query Frame = 0


Query: 97  QHCFSFAFTENVXPYGCPYAGSECSAVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNP 156
           QHC          PY CPYAGSECS  GDIP LV HL+DDHKVDMH GCTFNHRYVKSNP
Sbjct: 139 QHC-------RFRPYTCPYAGSECSVTGDIPTLVVHLKDDHKVDMHDGCTFNHRYVKSNP 198

Query: 157 REVENATWMLTSGQLANRQ 176
            EVENATWMLT      RQ
Sbjct: 199 HEVENATWMLTVFNCFGRQ 210

[Close]

BLAST of CaUC05G083310 vs. ExPASy Swiss-Prot
Match: Q10L91 (E3 ubiquitin-protein ligase DIS1 OS=Oryza sativa subsp. japonica OX=39947 GN=DIS1 PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.7e-25
Identity = 49/58 (84.48%), Postives = 52/58 (89.66%), Query Frame = 0


Query: 110 PYGCPYAGSECSAVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLT 168
           PY CPYAGSEC+  GDIP+LV HL+DDHKVDMH GCTFNHRYVKSNP EVENATWMLT
Sbjct: 138 PYSCPYAGSECTVAGDIPYLVNHLKDDHKVDMHNGCTFNHRYVKSNPHEVENATWMLT 195

[Close]

BLAST of CaUC05G083310 vs. ExPASy TrEMBL
Match: I1JYR7 (RING-type E3 ubiquitin transferase OS=Glycine max OX=3847 GN=GLYMA_04G235700 PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.1e-27
Identity = 59/66 (89.39%), Postives = 59/66 (89.39%), Query Frame = 0


Query: 107 NVXPYGCPYAGSECSAVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML 166
           N  PY CPYAGSECS VGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML
Sbjct: 144 NFRPYSCPYAGSECSVVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML 203

Query: 167 TSGQLA 173
           T   LA
Sbjct: 204 TLSSLA 209

[Close]

BLAST of CaUC05G083310 vs. ExPASy TrEMBL
Match: A0A6A5P7K0 (RING-type E3 ubiquitin transferase OS=Lupinus albus OX=3870 GN=Lal_00001935 PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.4e-27
Identity = 58/61 (95.08%), Postives = 58/61 (95.08%), Query Frame = 0


Query: 107 NVXPYGCPYAGSECSAVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML 166
           N  PYGCPYAGSECS VGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML
Sbjct: 168 NFRPYGCPYAGSECSVVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML 227

Query: 167 T 168
           T
Sbjct: 228 T 228

[Close]

BLAST of CaUC05G083310 vs. ExPASy TrEMBL
Match: A0A6A4PQS7 (RING-type E3 ubiquitin transferase OS=Lupinus albus OX=3870 GN=Lalb_Chr11g0066871 PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.4e-27
Identity = 58/61 (95.08%), Postives = 58/61 (95.08%), Query Frame = 0


Query: 107 NVXPYGCPYAGSECSAVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML 166
           N  PYGCPYAGSECS VGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML
Sbjct: 145 NFRPYGCPYAGSECSVVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML 204

Query: 167 T 168
           T
Sbjct: 205 T 205

[Close]

BLAST of CaUC05G083310 vs. ExPASy TrEMBL
Match: A0A1J7GC84 (RING-type E3 ubiquitin transferase OS=Lupinus angustifolius OX=3871 GN=TanjilG_21716 PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.4e-27
Identity = 58/61 (95.08%), Postives = 58/61 (95.08%), Query Frame = 0


Query: 107 NVXPYGCPYAGSECSAVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML 166
           N  PYGCPYAGSECS VGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML
Sbjct: 144 NFRPYGCPYAGSECSVVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML 203

Query: 167 T 168
           T
Sbjct: 204 T 204

[Close]

BLAST of CaUC05G083310 vs. ExPASy TrEMBL
Match: A0A5D3E075 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G003740 PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.4e-27
Identity = 58/61 (95.08%), Postives = 58/61 (95.08%), Query Frame = 0


Query: 107 NVXPYGCPYAGSECSAVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML 166
           N  PY CPYAGSECSAVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML
Sbjct: 152 NYRPYSCPYAGSECSAVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML 211

Query: 167 T 168
           T
Sbjct: 212 T 212

[Close]

BLAST of CaUC05G083310 vs. TAIR 10
Match: AT5G53360.1 (TRAF-like superfamily protein )

HSP 1 Score: 128.6 bits (322), Expect = 8.8e-30
Identity = 56/61 (91.80%), Postives = 57/61 (93.44%), Query Frame = 0


Query: 107 NVXPYGCPYAGSECSAVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML 166
           N  PY CPYAGSEC+AVGDI FLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML
Sbjct: 52  NFRPYSCPYAGSECAAVGDITFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML 111

Query: 167 T 168
           T
Sbjct: 112 T 112

[Close]

BLAST of CaUC05G083310 vs. TAIR 10
Match: AT3G61790.1 (Protein with RING/U-box and TRAF-like domains )

HSP 1 Score: 128.3 bits (321), Expect = 1.2e-29
Identity = 55/61 (90.16%), Postives = 56/61 (91.80%), Query Frame = 0


Query: 107 NVXPYGCPYAGSECSAVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML 166
           N  PY CPYAGSECS  GDIPFLVAHLRDDHKVDMH+GCTFNHRYVKSNPREVENATWML
Sbjct: 145 NFRPYSCPYAGSECSVTGDIPFLVAHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWML 204

Query: 167 T 168
           T
Sbjct: 205 T 205

[Close]

BLAST of CaUC05G083310 vs. TAIR 10
Match: AT4G27880.1 (Protein with RING/U-box and TRAF-like domains )

HSP 1 Score: 123.6 bits (309), Expect = 2.8e-28
Identity = 54/61 (88.52%), Postives = 54/61 (88.52%), Query Frame = 0


Query: 107 NVXPYGCPYAGSECSAVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWML 166
           N  PY CPYAGSEC  VGDIPFLVAHLRDDHKVDMH G TFNHRYVKSNPREVENATWML
Sbjct: 146 NFRPYSCPYAGSECGIVGDIPFLVAHLRDDHKVDMHAGSTFNHRYVKSNPREVENATWML 205

Query: 167 T 168
           T
Sbjct: 206 T 206

[Close]

BLAST of CaUC05G083310 vs. TAIR 10
Match: AT3G58040.1 (seven in absentia of Arabidopsis 2 )

HSP 1 Score: 119.0 bits (297), Expect = 7.0e-27
Identity = 55/79 (69.62%), Postives = 56/79 (70.89%), Query Frame = 0


Query: 97  QHCFSFAFTENVXPYGCPYAGSECSAVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNP 156
           QHC          PY CPYAGSECS  GDIP LV HL+DDHKVDMH GCTFNHRYVKSNP
Sbjct: 139 QHC-------RFRPYTCPYAGSECSVTGDIPTLVVHLKDDHKVDMHDGCTFNHRYVKSNP 198

Query: 157 REVENATWMLTSGQLANRQ 176
            EVENATWMLT      RQ
Sbjct: 199 HEVENATWMLTVFNCFGRQ 210

[Close]

BLAST of CaUC05G083310 vs. TAIR 10
Match: AT2G41980.1 (Protein with RING/U-box and TRAF-like domains )

HSP 1 Score: 115.9 bits (289), Expect = 5.9e-26
Identity = 54/79 (68.35%), Postives = 55/79 (69.62%), Query Frame = 0


Query: 97  QHCFSFAFTENVXPYGCPYAGSECSAVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNP 156
           QHC           Y CPYAGSECS  GDIP LV HL+DDHKVDMH GCTFNHRYVKSNP
Sbjct: 136 QHC-------RFRSYSCPYAGSECSVTGDIPTLVDHLKDDHKVDMHDGCTFNHRYVKSNP 195

Query: 157 REVENATWMLTSGQLANRQ 176
            EVENATWMLT      RQ
Sbjct: 196 HEVENATWMLTVFNCFGRQ 207

The following BLAST results are available for this feature:

BLAST of CaUC05G083310 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF1893457.1	2.9e-27	95.08	hypothetical protein Lal_00001935 [Lupinus albus]	[more]
OIV98006.1	2.9e-27	95.08	hypothetical protein TanjilG_21716 [Lupinus angustifolius]	[more]
KAE9604015.1	2.9e-27	95.08	putative aminoacyltransferase, E1 ubiquitin-activating enzyme [Lupinus albus]	[more]
XP_011651326.1	5.0e-27	95.08	E3 ubiquitin-protein ligase SINAT5 [Cucumis sativus] >KGN57672.1 hypothetical pr...	[more]
KAA0050507.1	5.0e-27	95.08	ubiquitin ligase [Cucumis melo var. makuwa] >TYK29184.1 ubiquitin ligase [Cucumi...	[more]

BLAST of CaUC05G083310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S3N1	1.2e-28	91.80	E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana OX=3702 GN=SINAT5 PE=...	[more]
Q84JL3	1.6e-28	90.16	E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana OX=3702 GN=SINAT3 PE=...	[more]
Q9STN8	4.0e-27	88.52	E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana OX=3702 GN=SINAT4 PE=...	[more]
Q9M2P4	9.9e-26	69.62	E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana OX=3702 GN=SINAT2 PE=...	[more]
Q10L91	1.7e-25	84.48	E3 ubiquitin-protein ligase DIS1 OS=Oryza sativa subsp. japonica OX=39947 GN=DIS...	[more]

BLAST of CaUC05G083310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
I1JYR7	1.1e-27	89.39	RING-type E3 ubiquitin transferase OS=Glycine max OX=3847 GN=GLYMA_04G235700 PE=...	[more]
A0A6A5P7K0	1.4e-27	95.08	RING-type E3 ubiquitin transferase OS=Lupinus albus OX=3870 GN=Lal_00001935 PE=3...	[more]
A0A6A4PQS7	1.4e-27	95.08	RING-type E3 ubiquitin transferase OS=Lupinus albus OX=3870 GN=Lalb_Chr11g006687...	[more]
A0A1J7GC84	1.4e-27	95.08	RING-type E3 ubiquitin transferase OS=Lupinus angustifolius OX=3871 GN=TanjilG_2...	[more]
A0A5D3E075	2.4e-27	95.08	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]

BLAST of CaUC05G083310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53360.1	8.8e-30	91.80	TRAF-like superfamily protein	[more]
AT3G61790.1	1.2e-29	90.16	Protein with RING/U-box and TRAF-like domains	[more]
AT4G27880.1	2.8e-28	88.52	Protein with RING/U-box and TRAF-like domains	[more]
AT3G58040.1	7.0e-27	69.62	seven in absentia of Arabidopsis 2	[more]
AT2G41980.1	5.9e-26	68.35	Protein with RING/U-box and TRAF-like domains	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 110..138 e-value: 1.2E-6 score: 30.2
None	No IPR available	PANTHER	PTHR10315:SF92	E3 UBIQUITIN-PROTEIN LIGASE	coord: 107..168
None	No IPR available	PANTHER	PTHR10315	E3 UBIQUITIN PROTEIN LIGASE SIAH	coord: 107..168
None	No IPR available	SUPERFAMILY	49599	TRAF domain-like	coord: 109..168
IPR018121	Seven-in-absentia protein, TRAF-like domain	PFAM	PF03145	Sina	coord: 109..168 e-value: 6.0E-16 score: 59.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC05G083310.1	CaUC05G083310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007275	multicellular organism development
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0016746	acyltransferase activity
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0008270	zinc ion binding