CaUC05G083140 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAAGCATGCAACAATCCTTCGAGGCTGGCCAATCCCAAGGCCAAGCAGAGGTATCTAAATGTTTTGTTGTTGAATATTTGAATGGTGAGTGTATAAAATATGTAAAAGATGTTTTGGACTAAAATTTTGAGAATGTGATAATGGGTTGAAGGCAAAGACTGAAGAATGGATTGAATCGGGGAAGGAAGCAGCAAACAAGGCATGTGACAACGCACCCAATGTTTCACAATGTGCTAAGGACTCTGCCCACCAAACCAAGCAAGAAACTTCCAATTTTCTCCAACAGGTTCTCTCTATATATGCTCATACTCTATATCTTTAATAAAAATGAGTTTTTTGAAAAACACGTGGGGTCCTAACTTTCTGTTAAATGAATCTACTTTGTAGACTGGAGAGCAAATGATGAATATGGCTCAAGGTGCAGTGGATACCGTGAAGAATACCCTTGGAATGAATAATGAAAAGAAGAATTGA ATGTCAAGCATGCAACAATCCTTCGAGGCTGGCCAATCCCAAGGCCAAGCAGAGGCAAAGACTGAAGAATGGATTGAATCGGGGAAGGAAGCAGCAAACAAGGCATGTGACAACGCACCCAATGTTTCACAATGTGCTAAGGACTCTGCCCACCAAACCAAGCAAGAAACTTCCAATTTTCTCCAACAGACTGGAGAGCAAATGATGAATATGGCTCAAGGTGCAGTGGATACCGTGAAGAATACCCTTGGAATGAATAATGAAAAGAAGAATTGA ATGTCAAGCATGCAACAATCCTTCGAGGCTGGCCAATCCCAAGGCCAAGCAGAGGCAAAGACTGAAGAATGGATTGAATCGGGGAAGGAAGCAGCAAACAAGGCATGTGACAACGCACCCAATGTTTCACAATGTGCTAAGGACTCTGCCCACCAAACCAAGCAAGAAACTTCCAATTTTCTCCAACAGACTGGAGAGCAAATGATGAATATGGCTCAAGGTGCAGTGGATACCGTGAAGAATACCCTTGGAATGAATAATGAAAAGAAGAATTGA MSSMQQSFEAGQSQGQAEAKTEEWIESGKEAANKACDNAPNVSQCAKDSAHQTKQETSNFLQQTGEQMMNMAQGAVDTVKNTLGMNNEKKN Homology
BLAST of CaUC05G083140 vs. NCBI nr
Match: XP_022157950.1 (late embryogenesis abundant protein 1 [Momordica charantia]) HSP 1 Score: 106.3 bits (264), Expect = 1.4e-19 Identity = 58/88 (65.91%), Postives = 73/88 (82.95%), Query Frame = 0
BLAST of CaUC05G083140 vs. NCBI nr
Match: XP_018432834.1 (PREDICTED: late embryogenesis abundant protein 1-like [Raphanus sativus]) HSP 1 Score: 102.1 bits (253), Expect = 2.7e-18 Identity = 53/90 (58.89%), Postives = 68/90 (75.56%), Query Frame = 0
BLAST of CaUC05G083140 vs. NCBI nr
Match: XP_009102532.1 (late embryogenesis abundant protein 1 [Brassica rapa] >XP_013659028.1 late embryogenesis abundant protein 1 [Brassica napus] >XP_022544361.1 late embryogenesis abundant protein 1-like isoform X2 [Brassica napus] >KAF3590708.1 hypothetical protein DY000_02022672 [Brassica cretica] >KAF8088486.1 hypothetical protein N665_0540s0008 [Sinapis alba] >KAG5378632.1 hypothetical protein IGI04_026474 [Brassica rapa subsp. trilocularis] >VDD36135.1 unnamed protein product [Brassica oleracea] >RID53196.1 hypothetical protein BRARA_G00613 [Brassica rapa]) HSP 1 Score: 101.7 bits (252), Expect = 3.5e-18 Identity = 53/90 (58.89%), Postives = 67/90 (74.44%), Query Frame = 0
BLAST of CaUC05G083140 vs. NCBI nr
Match: XP_022761185.1 (late embryogenesis abundant protein 1 isoform X2 [Durio zibethinus]) HSP 1 Score: 100.1 bits (248), Expect = 1.0e-17 Identity = 54/89 (60.67%), Postives = 71/89 (79.78%), Query Frame = 0
BLAST of CaUC05G083140 vs. NCBI nr
Match: XP_013597327.1 (PREDICTED: late embryogenesis abundant protein 1-like [Brassica oleracea var. oleracea]) HSP 1 Score: 100.1 bits (248), Expect = 1.0e-17 Identity = 52/90 (57.78%), Postives = 67/90 (74.44%), Query Frame = 0
BLAST of CaUC05G083140 vs. ExPASy Swiss-Prot
Match: O49816 (Late embryogenesis abundant protein 1 OS=Cicer arietinum OX=3827 PE=2 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 7.1e-06 Identity = 34/87 (39.08%), Postives = 50/87 (57.47%), Query Frame = 0
BLAST of CaUC05G083140 vs. ExPASy Swiss-Prot
Match: O49817 (Late embryogenesis abundant protein 2 OS=Cicer arietinum OX=3827 PE=2 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 6.0e-05 Identity = 31/84 (36.90%), Postives = 48/84 (57.14%), Query Frame = 0
BLAST of CaUC05G083140 vs. ExPASy Swiss-Prot
Match: P13939 (Late embryogenesis abundant protein D-7 OS=Gossypium hirsutum OX=3635 PE=2 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 1.7e-04 Identity = 37/118 (31.36%), Postives = 54/118 (45.76%), Query Frame = 0
BLAST of CaUC05G083140 vs. ExPASy Swiss-Prot
Match: Q9LW12 (Late embryogenesis abundant protein 29 OS=Arabidopsis thaliana OX=3702 GN=LEA29 PE=2 SV=1) HSP 1 Score: 44.3 bits (103), Expect = 8.7e-04 Identity = 33/98 (33.67%), Postives = 55/98 (56.12%), Query Frame = 0
BLAST of CaUC05G083140 vs. ExPASy TrEMBL
Match: A0A6J1DUG1 (late embryogenesis abundant protein 1 OS=Momordica charantia OX=3673 GN=LOC111024551 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 6.9e-20 Identity = 58/88 (65.91%), Postives = 73/88 (82.95%), Query Frame = 0
BLAST of CaUC05G083140 vs. ExPASy TrEMBL
Match: A0A6J0JD89 (late embryogenesis abundant protein 1-like OS=Raphanus sativus OX=3726 GN=LOC108805314 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 1.3e-18 Identity = 53/90 (58.89%), Postives = 68/90 (75.56%), Query Frame = 0
BLAST of CaUC05G083140 vs. ExPASy TrEMBL
Match: A0A397YQV0 (Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRAA07T28597Z PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.7e-18 Identity = 53/90 (58.89%), Postives = 67/90 (74.44%), Query Frame = 0
BLAST of CaUC05G083140 vs. ExPASy TrEMBL
Match: M4DEV0 (Uncharacterized protein OS=Brassica rapa subsp. pekinensis OX=51351 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.7e-18 Identity = 53/90 (58.89%), Postives = 67/90 (74.44%), Query Frame = 0
BLAST of CaUC05G083140 vs. ExPASy TrEMBL
Match: A0A3P6ERB9 (Uncharacterized protein OS=Brassica oleracea OX=3712 GN=BOLC7T41695H PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.7e-18 Identity = 53/90 (58.89%), Postives = 67/90 (74.44%), Query Frame = 0
BLAST of CaUC05G083140 vs. TAIR 10
Match: AT4G13560.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 72.4 bits (176), Expect = 2.1e-13 Identity = 43/107 (40.19%), Postives = 60/107 (56.07%), Query Frame = 0
BLAST of CaUC05G083140 vs. TAIR 10
Match: AT1G52680.1 (late embryogenesis abundant protein-related / LEA protein-related ) HSP 1 Score: 52.0 bits (123), Expect = 3.0e-07 Identity = 38/90 (42.22%), Postives = 51/90 (56.67%), Query Frame = 0
BLAST of CaUC05G083140 vs. TAIR 10
Match: AT3G15670.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 44.3 bits (103), Expect = 6.2e-05 Identity = 33/98 (33.67%), Postives = 55/98 (56.12%), Query Frame = 0
BLAST of CaUC05G083140 vs. TAIR 10
Match: AT1G52690.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 43.1 bits (100), Expect = 1.4e-04 Identity = 34/88 (38.64%), Postives = 53/88 (60.23%), Query Frame = 0
BLAST of CaUC05G083140 vs. TAIR 10
Match: AT1G52690.2 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 43.1 bits (100), Expect = 1.4e-04 Identity = 34/88 (38.64%), Postives = 53/88 (60.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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