CaUC05G080640 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC05G080640
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionprotein PAIR1 isoform X1
LocationCiama_Chr05: 1582446 .. 1586476 (+)
RNA-Seq ExpressionCaUC05G080640
SyntenyCaUC05G080640
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGGCTGAAGATAAACAAGGCCTGTGATCTCAGTTCTATCTCCGTTCTTCCTCCTCAATCCAGGCATGCGTCTGTTCTTTATTATTTTCAGCGTTATATTTTGTTTGAATTACTAGAATTCATGGATAACAATGCGCAAAGAAGTTTAGGTTGATATGTTGTGAACTCAGCAGCTTGACATTTTTTTAAGAACTTATTTCTTTCCCTTCTAGTTGTTTATCGTGTTGCGAGTTTTGAAGGATATGGATTTCCTTTTGGTCCTAGCTGCGTTCTTTATGTTTCAGAAGGAATTTGTTGTCTCCGAGCTTTTGAGAGATCGACATTTTAAATTTTACTGCAGATATTTCGAAATTTTTCTTTACTCACAGCTTAGTTTGATCTGTTCTATGATTGGATTGACTTCATTTTTGTCGGCACGATATTCAGTTACTTTAAGTTTGGATAAAAAGAACGGAGGAGTAAGAACTGGAAGGTTTCACACTATAATCTTATCATGAAATTGCAAGCTGAATACGCTGTAAACTTGATCCGATCTCTTGAGTTGTACGTCATTATTTTCAATTTTGTTCAGCGCAAAAATGTTCAAGGAAAATATGAAAATTTCTAGTGTATTCTAAAATAAAAATATGAATGGTCTTGATAATCTGTAGGAGGTCAAATGCGTTAACCACTGGGCAGCAAGCACCACAGTTGCGATCACAACCTTCGCAACAATCCTTTTCTCAGGGACTGTCATCTCAGCACGGCATGTATTCTCAACTTTCTCAGAACTCTTTTGACGAAGTCGTGACAAATGAACAGGTCAATCTCGGTTCTTCTCTGGATTTTCACATTTAGGACTTTGTTTCTCCATTAAGAAATGAAGGAAATGATACTAAAATGCTATCGCTCTTTGTCTTTCCTTGCGTATTAGCATTGAAGACAAAACTTGGAGATGGTTCTTTTCATTGTTTAGGAACTACTTATGAATTTTATTTTAATATCTATTTTTTGTCGTAACTAATTTACCAAAAAAAAGAAAAGATAAGGAAACTATCTCTTGAGTTCTTAAATTTAATTTGAGCTTTTCGTTTGCGTGCAATAAAGTTGTTGTTGCTTCTAAGGAAAAATGAACGAGAAAGAGTGAGTGTTTTTTTGTTCCTTGTATTTAGTTGTCCGGAGAGAACACTTCACTGATTACTGTTAAGCTTGCCAAGTCTTAGTTGTGTTACTGGTACACATAAATAATTCATATATATGTGTAATATGCTGGTATAGAATGGGGCTTTCTTGGCTGTCATTCCCATATCTAGTCTCTTCAGAATAGTAACCGATGCAATTTAAGAACATGTGAACACGCATGCGTCTTTCATGGTAAGCACTCTTTGAAACAATTCCCCTCACAGTAGAGCATTCCTTCAACTCTTCATTCTGCAGAATATTATCATATGCGTACCTTTAGTTATACAAAATGCTTATATGAATATGTTTGTGTGGGTATATATCTATTAAGACAGCGCCATGTTAAATGCTCTTAGTTTCTCATGCAATGAGGAACTGACTATGCCGTCGTATTAACTTGAAATAAAGTTCTATGATTATTGTGGCGTTCTTTCTGTTTTCATCTCATCTTATGAATTAACTTTGATGTACCACTTTTTGCGGCAGAGATTTAGCTCTCAAGACCGAGAAAACTCAATTAAGAAGAATTCCTTTTTTACTCCTCTAAGTTACTCCAGAGAAGATTGCCAAATGGCACTCTCTAAATCTTCAACCAGTCTAACACAAAGATGGAAATCAACTCCTCTTCCGGACTCTAAGTGTAAGTTCACTATCTTGGACTCATATGACAGACTTAAAACTGTTCCAATAAGTTCGTTTGATTTCATTACAGCGTGGTATAACTGTTTGAGTAGGGTAAGTTGATCAACTGCCATTTCTTACAACCTTTATATCTTTCGTGACTTGATTTCATAGTTTAGCTTTCCTTTTCAGGTCAAGTTGGTGAAGAACTTGACCGCCGCCTTGGAACCATAGAAAACTCATTAAACAAGTTTGGAAAGATCTTGGATTCTCTTCACAGTGATATCCTGCAACTAAACAAAGGGATGAAGCAAGTTTCTCTGGATGGTGAGCTTTGCAATCCCTCAGGCTGTATAAAGTTGGATGAGAAACTATGTATTACTGCTTGAAAAACACTTTCTGCACTGAAACCTGATGTGTTTGTTCCTCAAGTAGGAACAAAGGTGATGAATATGCTTTATTTGAATTTCAATTCCTTCATAAAGTAGGATTAAGATTGCTATGTTATGAATGTGTAAAGGGAAAGTGCTCAAATCAGTACAAAATCCTGACCTCAAATTTGAAGCTTCAAGGCAAAAGTATATTAAAATAATATGCTTATTTATTTTTCAAATTGCAGTGGAAGGCATATGGCAAAAGATGCTTGTTAACAGTAGCTCGCTACAATCCATGGTAAAATTGTACTAGATCAATACAATATTTTATTGACCATTAAGTTTCTTTAATTTTAATTGTAATGTCTAAATTGTGCATTCAACTAATGAGCGCAAAGTTCAATGTCAGAACAAAGAGCACGATGACATGAAAGCTACCCTCGATGGAGGCTTCAAATTGATATCCGATCTGCTTAAGAAGGATGCATACCAAGAAAGGCTACATGAGATTTCCGATGTTCTTTCTTCATTGGAAAAGCAAGTACAAGTATCTCAACTGAAATTAAAAAATGACTTCATCAGCACATTCACCCAAGAAATGAAGGTCAGTGCATGCTGTATCAAGTATTGCTATAAATGTACGATAAAAAGGATTTGCCTCCTAACTCCATTCCGGCTATTTATACATATTCGTAAAAGTACCCTGCCTAAATTTGTATTCTACTTATTCGTCATTAACTTGTAGGCAATTGTCTGTACCTTGAAGAACCCCTTGCAGAAATTTCCACCTCGCTCTATTCAATCTCCTGAGGTTCGGTTTCTTACGAAATATCGGTCAAATGTCTTAGGCGTTTGTTTCATCCTGAACTGTGTCTCATGGAAGGATTTAATTGCAAATGTCAGGGTACTGCCTGTTTGGATGTTCCACCGCAAAAGCGACATCGATGTAAAATGTATGCATTTCAGGTTTCATAATAACTAACTTGATTCCTTGTGTTTTCATCCATTTCAGATGCAGAAAGTTGTCATATTATAAATGAATAAATTACTGATAATGGTGAATGGGATTAGATTGAATTGATGTATTCCAATCTGAGGGTTCAACTTTCCCTTCTAATGCACAAAATGTAGAATTAGTGACCTACAAAAGCTCAATGGTATCTTCCATTCCCGTATATTTTATGGCTCTGATTTATAGCAGTCTGGAAGTTCTCAAGGGGATTATGTGTTATATTCCATTAAATACTATCATATTCCATACGTAGTATAAGCGAGGAGGAAAGAAATTTCCATTTGTCGGTAATGTTATCTTAATGTGGCATGAAAAATCATACTCTTGAGCAGCCACAATATTCTGGTGATTGTTGATGAACTATGGAATTATATGTATTGGTTCTTTGTTGCTTAGCATCTTAAGAGAACTTACTTTTTCCACTTAATATCAGTCAATCTGCGTCTCCAAATGTTTGCATTCGAGCAACTGCAGTACAAAAGGAGGAAGTAGGACGGTGGAAATCAGTAAAAGTGGGAAAGACGTTTTGCACTAGCAGTGTGGTGAAAAAGGATGATCCAAAGAAAGTAATTCCATTTTCTGAACAGGTACCGATTTGAATTTCATTATGTTTCCTGCTATCACATTACCATTTATTGTGGAAATTGTGCTATTGCATTTTTTATAGCCAATATTAAGTTATTCCTTGATTATTGAACCCGAAATTTACACATTATTCTATGAAGCGGGTAATGATTTCACCTTGGATATTAGCAGTGCTTGGTGCTGGAAAGGGAATATAGAGTTATTGTTGATTCCGATGAGGAGATTGAAAGAAGTTTCTCCTGCTTAATTGAAGAGAAGAAAACAGGTGATTCCTGA

mRNA sequence

ATGCGGCTGAAGATAAACAAGGCCTGTGATCTCAGTTCTATCTCCGTTCTTCCTCCTCAATCCAGGCATGCGAGGTCAAATGCGTTAACCACTGGGCAGCAAGCACCACAGTTGCGATCACAACCTTCGCAACAATCCTTTTCTCAGGGACTGTCATCTCAGCACGGCATGTATTCTCAACTTTCTCAGAACTCTTTTGACGAAGTCGTGACAAATGAACAGAGATTTAGCTCTCAAGACCGAGAAAACTCAATTAAGAAGAATTCCTTTTTTACTCCTCTAAGTTACTCCAGAGAAGATTGCCAAATGGCACTCTCTAAATCTTCAACCAGTCTAACACAAAGATGGAAATCAACTCCTCTTCCGGACTCTAAGTGTCAAGTTGGTGAAGAACTTGACCGCCGCCTTGGAACCATAGAAAACTCATTAAACAAGTTTGGAAAGATCTTGGATTCTCTTCACAGTGATATCCTGCAACTAAACAAAGGGATGAAGCAAGTTTCTCTGGATGTGGAAGGCATATGGCAAAAGATGCTTGTTAACAGTAGCTCGCTACAATCCATGAACAAAGAGCACGATGACATGAAAGCTACCCTCGATGGAGGCTTCAAATTGATATCCGATCTGCTTAAGAAGGATGCATACCAAGAAAGGCTACATGAGATTTCCGATGTTCTTTCTTCATTGGAAAAGCAAGTACAAGTATCTCAACTGAAATTAAAAAATGACTTCATCAGCACATTCACCCAAGAAATGAAGGCAATTGTCTGTACCTTGAAGAACCCCTTGCAGAAATTTCCACCTCGCTCTATTCAATCTCCTGAGGTTCGGTTTCTTACGAAATATCGGTCAAATGTCTTAGGCGTTTGTTTCATCCTGAACTGTGTCTCATGGAAGGATTTAATTGCAAATGTCAGGGTACTGCCTGTTTGGATGTTCCACCGCAAAAGCGACATCGATGTAAAATGTATGCATTTCAGTCAATCTGCGTCTCCAAATGTTTGCATTCGAGCAACTGCAGTACAAAAGGAGGAAGTAGGACGGTGGAAATCAGTAAAAGTGGGAAAGACGTTTTGCACTAGCAGTGTGGTGAAAAAGGATGATCCAAAGAAAGTAATTCCATTTTCTGAACAGTGCTTGGTGCTGGAAAGGGAATATAGAGTTATTGTTGATTCCGATGAGGAGATTGAAAGAAGTTTCTCCTGCTTAATTGAAGAGAAGAAAACAGGTGATTCCTGA

Coding sequence (CDS)

ATGCGGCTGAAGATAAACAAGGCCTGTGATCTCAGTTCTATCTCCGTTCTTCCTCCTCAATCCAGGCATGCGAGGTCAAATGCGTTAACCACTGGGCAGCAAGCACCACAGTTGCGATCACAACCTTCGCAACAATCCTTTTCTCAGGGACTGTCATCTCAGCACGGCATGTATTCTCAACTTTCTCAGAACTCTTTTGACGAAGTCGTGACAAATGAACAGAGATTTAGCTCTCAAGACCGAGAAAACTCAATTAAGAAGAATTCCTTTTTTACTCCTCTAAGTTACTCCAGAGAAGATTGCCAAATGGCACTCTCTAAATCTTCAACCAGTCTAACACAAAGATGGAAATCAACTCCTCTTCCGGACTCTAAGTGTCAAGTTGGTGAAGAACTTGACCGCCGCCTTGGAACCATAGAAAACTCATTAAACAAGTTTGGAAAGATCTTGGATTCTCTTCACAGTGATATCCTGCAACTAAACAAAGGGATGAAGCAAGTTTCTCTGGATGTGGAAGGCATATGGCAAAAGATGCTTGTTAACAGTAGCTCGCTACAATCCATGAACAAAGAGCACGATGACATGAAAGCTACCCTCGATGGAGGCTTCAAATTGATATCCGATCTGCTTAAGAAGGATGCATACCAAGAAAGGCTACATGAGATTTCCGATGTTCTTTCTTCATTGGAAAAGCAAGTACAAGTATCTCAACTGAAATTAAAAAATGACTTCATCAGCACATTCACCCAAGAAATGAAGGCAATTGTCTGTACCTTGAAGAACCCCTTGCAGAAATTTCCACCTCGCTCTATTCAATCTCCTGAGGTTCGGTTTCTTACGAAATATCGGTCAAATGTCTTAGGCGTTTGTTTCATCCTGAACTGTGTCTCATGGAAGGATTTAATTGCAAATGTCAGGGTACTGCCTGTTTGGATGTTCCACCGCAAAAGCGACATCGATGTAAAATGTATGCATTTCAGTCAATCTGCGTCTCCAAATGTTTGCATTCGAGCAACTGCAGTACAAAAGGAGGAAGTAGGACGGTGGAAATCAGTAAAAGTGGGAAAGACGTTTTGCACTAGCAGTGTGGTGAAAAAGGATGATCCAAAGAAAGTAATTCCATTTTCTGAACAGTGCTTGGTGCTGGAAAGGGAATATAGAGTTATTGTTGATTCCGATGAGGAGATTGAAAGAAGTTTCTCCTGCTTAATTGAAGAGAAGAAAACAGGTGATTCCTGA

Protein sequence

MRLKINKACDLSSISVLPPQSRHARSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLVNSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDAYQERLHEISDVLSSLEKQVQVSQLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKDLIANVRVLPVWMFHRKSDIDVKCMHFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGDS
Homology
BLAST of CaUC05G080640 vs. NCBI nr
Match: XP_038882642.1 (putative recombination initiation defects 3 isoform X2 [Benincasa hispida])

HSP 1 Score: 623.2 bits (1606), Expect = 1.6e-174
Identity = 343/411 (83.45%), Postives = 354/411 (86.13%), Query Frame = 0

Query: 1   MRLKINKACDLSSISVLPPQSRHARSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60
           MRLKINKACDLSSISVLPP SR  RSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ
Sbjct: 1   MRLKINKACDLSSISVLPPHSR--RSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60

Query: 61  LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQRWKSTP 120
           LSQNSFDEVVTNEQRFSSQDRENSIKKNSFF PLSYSREDCQ+ALSKSSTSLTQRWK TP
Sbjct: 61  LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREDCQLALSKSSTSLTQRWKPTP 120

Query: 121 LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLV 180
           LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQ+SLDVEGIWQKMLV
Sbjct: 121 LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMLV 180

Query: 181 NSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDAYQERLHEISDVLSSLEKQVQVSQLKL 240
           NSSSLQSMNK+HDDMKATLDGGFKLIS+ LKKDAYQERL+EIS+VLSSLEKQVQ SQLKL
Sbjct: 181 NSSSLQSMNKDHDDMKATLDGGFKLISNQLKKDAYQERLNEISNVLSSLEKQVQASQLKL 240

Query: 241 KNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKD 300
           KNDFISTFTQE+KA+VCTLKNPLQKFPP SIQSPE                   C+    
Sbjct: 241 KNDFISTFTQEIKAMVCTLKNPLQKFPPHSIQSPE----------------STACLD--- 300

Query: 301 LIANVRVLPVWMFHRKSDIDVKCMHFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCT 360
                  +P    HR       C    QSASPNVCIRAT VQKEEVGRWKSVKVGKTFCT
Sbjct: 301 -------VPQQKRHR-------CK--IQSASPNVCIRATTVQKEEVGRWKSVKVGKTFCT 360

Query: 361 SSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGD 412
            SV KKDDPKKVIPFSEQ LVLEREYRVIVDSDEEIERSFSCLIEEKKTG+
Sbjct: 361 GSVAKKDDPKKVIPFSEQRLVLEREYRVIVDSDEEIERSFSCLIEEKKTGE 374

BLAST of CaUC05G080640 vs. NCBI nr
Match: XP_038882627.1 (putative recombination initiation defects 3 isoform X1 [Benincasa hispida] >XP_038882635.1 putative recombination initiation defects 3 isoform X1 [Benincasa hispida])

HSP 1 Score: 618.6 bits (1594), Expect = 3.8e-173
Identity = 343/412 (83.25%), Postives = 354/412 (85.92%), Query Frame = 0

Query: 1   MRLKINKACDLSSISVLPPQSRHARSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60
           MRLKINKACDLSSISVLPP SR  RSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ
Sbjct: 1   MRLKINKACDLSSISVLPPHSR--RSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60

Query: 61  LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQRWKSTP 120
           LSQNSFDEVVTNEQRFSSQDRENSIKKNSFF PLSYSREDCQ+ALSKSSTSLTQRWK TP
Sbjct: 61  LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREDCQLALSKSSTSLTQRWKPTP 120

Query: 121 LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLV 180
           LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQ+SLDVEGIWQKMLV
Sbjct: 121 LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMLV 180

Query: 181 NSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDAYQERLHEISDVLSSLEKQVQVSQLKL 240
           NSSSLQSMNK+HDDMKATLDGGFKLIS+ LKKDAYQERL+EIS+VLSSLEKQVQ SQLKL
Sbjct: 181 NSSSLQSMNKDHDDMKATLDGGFKLISNQLKKDAYQERLNEISNVLSSLEKQVQASQLKL 240

Query: 241 KNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKD 300
           KNDFISTFTQE+KA+VCTLKNPLQKFPP SIQSPE                   C+    
Sbjct: 241 KNDFISTFTQEIKAMVCTLKNPLQKFPPHSIQSPE----------------STACLD--- 300

Query: 301 LIANVRVLPVWMFHRKSDIDVKCMHFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCT 360
                  +P    HR       C    QSASPNVCIRAT VQKEEVGRWKSVKVGKTFCT
Sbjct: 301 -------VPQQKRHR-------CK--IQSASPNVCIRATTVQKEEVGRWKSVKVGKTFCT 360

Query: 361 SSVVKKDDPKKVIPFSE-QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGD 412
            SV KKDDPKKVIPFSE Q LVLEREYRVIVDSDEEIERSFSCLIEEKKTG+
Sbjct: 361 GSVAKKDDPKKVIPFSEQQRLVLEREYRVIVDSDEEIERSFSCLIEEKKTGE 375

BLAST of CaUC05G080640 vs. NCBI nr
Match: XP_008438048.1 (PREDICTED: protein PAIR1 isoform X3 [Cucumis melo])

HSP 1 Score: 597.8 bits (1540), Expect = 7.0e-167
Identity = 331/410 (80.73%), Postives = 344/410 (83.90%), Query Frame = 0

Query: 1   MRLKINKACDLSSISVLPPQSRHARSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60
           MRLKINKACDLSSISVLPPQSR  R NALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ
Sbjct: 1   MRLKINKACDLSSISVLPPQSR--RLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60

Query: 61  LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQRWKSTP 120
           LSQNSFDEVVTNEQRFSSQDRENSIKKNSFF PLSYS+EDCQ+ LSKSSTSLTQ+W+ +P
Sbjct: 61  LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSP 120

Query: 121 LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLV 180
           L DSKCQVGEELDRRLGTIENSLNKFGKILDSL SDILQLNKGMKQVSLDVE IWQKMLV
Sbjct: 121 LTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLV 180

Query: 181 NSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDAYQERLHEISDVLSSLEKQVQVSQLKL 240
           NSS LQSMNK+HDDMKA +DGGFKLISD LKKDAYQERLHEISD LSSLEKQVQ SQLKL
Sbjct: 181 NSSLLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKL 240

Query: 241 KNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKD 300
           KNDFISTFT+EMKA++ TLK PLQKFPP SIQSPE       R+  L V           
Sbjct: 241 KNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPE-------RTACLDV----------- 300

Query: 301 LIANVRVLPVWMFHRKSDIDVKCMHFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCT 360
                   P    HR       C    QSASPNVC +ATAVQKEEVG WKSVKVGK FCT
Sbjct: 301 --------PKQKRHR-------CK--IQSASPNVCTQATAVQKEEVGMWKSVKVGKAFCT 360

Query: 361 SSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG 411
           SSVV +DDP KVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG
Sbjct: 361 SSVVTRDDPNKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG 373

BLAST of CaUC05G080640 vs. NCBI nr
Match: KAG6597127.1 (putative recombination initiation defects 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 594.3 bits (1531), Expect = 7.8e-166
Identity = 327/412 (79.37%), Postives = 345/412 (83.74%), Query Frame = 0

Query: 1   MRLKINKACDLSSISVLPPQSRHARSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60
           MRLKINKACDLSSISVLPPQS   RSNALTTGQQAPQLRSQPSQQSFSQGLSS HG  SQ
Sbjct: 1   MRLKINKACDLSSISVLPPQS---RSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQ 60

Query: 61  LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQRWKSTP 120
            SQNSFDEVVTNEQRFSSQDRENSIKKNSFF PLSYSRE+CQ+ LSKSSTSLTQRWKSTP
Sbjct: 61  FSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTP 120

Query: 121 LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLV 180
           LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLH DIL LN+GMKQ+SLDVEGIWQK++V
Sbjct: 121 LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIV 180

Query: 181 NSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDAYQERLHEISDVLSSLEKQVQVSQLKL 240
           NSS LQSMNKEHDDMK+TLDGGFKLISD LKKDAYQERLHEISDVLS+LEKQVQ SQLKL
Sbjct: 181 NSSLLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKL 240

Query: 241 KNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKD 300
           +NDFISTFTQEMKA+VCTLK PLQKFP R I+SPE                         
Sbjct: 241 RNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPE------------------------- 300

Query: 301 LIANVRVLPVWMFHRKSDIDVKCMHFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCT 360
              +   L V    R+     +C    QSASP+VCIRATAVQ EEVGRWKSVKVGKTFCT
Sbjct: 301 ---STASLDVPQQKRR-----RCK--IQSASPDVCIRATAVQTEEVGRWKSVKVGKTFCT 360

Query: 361 SSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGDS 413
           S+V KK+D KK IPFSEQ LV+EREYRVIVDSDEEIERSFSCLIEEKKTGDS
Sbjct: 361 STVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTGDS 374

BLAST of CaUC05G080640 vs. NCBI nr
Match: XP_023526420.1 (protein PAIR1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 593.6 bits (1529), Expect = 1.3e-165
Identity = 328/411 (79.81%), Postives = 345/411 (83.94%), Query Frame = 0

Query: 1   MRLKINKACDLSSISVLPPQSRHARSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60
           MRLKINKACDLSSISVLPPQSR  RSNALTTGQQAPQLRSQPSQQSFS GLSS+HGMYSQ
Sbjct: 1   MRLKINKACDLSSISVLPPQSR--RSNALTTGQQAPQLRSQPSQQSFSLGLSSEHGMYSQ 60

Query: 61  LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQRWKSTP 120
           LSQNSFDEVVTNEQRFSSQDRENSIKKNSFF P S+ REDCQ++LSKSSTSLTQRWKSTP
Sbjct: 61  LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPP-SFFREDCQLSLSKSSTSLTQRWKSTP 120

Query: 121 LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLV 180
           LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQ+SLDVEGIWQKM++
Sbjct: 121 LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMII 180

Query: 181 NSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDAYQERLHEISDVLSSLEKQVQVSQLKL 240
           +SS LQSMNKEHDDMKATLDGGFKLISD LK DAYQER+HEISDVLS+LEKQVQ S LKL
Sbjct: 181 SSSLLQSMNKEHDDMKATLDGGFKLISDQLKNDAYQERVHEISDVLSALEKQVQASHLKL 240

Query: 241 KNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKD 300
           KNDFISTFTQEM A+VCTLK PL+KFPP S  +PE              C  L+    K 
Sbjct: 241 KNDFISTFTQEMNAMVCTLKKPLKKFPPHS--TPEST-----------TC--LDAPQQKR 300

Query: 301 LIANVRVLPVWMFHRKSDIDVKCMHFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCT 360
           L   +                      Q ASPNVCIRATAVQ EEVGRWKSVKV K FCT
Sbjct: 301 LRCKI----------------------QPASPNVCIRATAVQSEEVGRWKSVKVEKAFCT 360

Query: 361 SSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGD 412
           SSVVKK+DPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG+
Sbjct: 361 SSVVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGE 371

BLAST of CaUC05G080640 vs. ExPASy Swiss-Prot
Match: Q0WWX5 (Putative recombination initiation defects 3 OS=Arabidopsis thaliana OX=3702 GN=PRD3 PE=1 SV=2)

HSP 1 Score: 226.1 bits (575), Expect = 7.3e-58
Identity = 159/431 (36.89%), Postives = 242/431 (56.15%), Query Frame = 0

Query: 1   MRLKINKACDLSSISVLPPQSRHARSNALTTGQQAPQLRSQPSQQSFSQGLSSQH---GM 60
           M++ INKACDL SISV PP  R +        Q + QLRSQ SQQSFSQG SS     G 
Sbjct: 1   MKMNINKACDLKSISVFPPNLRRS-----AEPQASQQLRSQQSQQSFSQGPSSSQRGCGG 60

Query: 61  YSQLSQNSFDEVVTNEQRFSSQDRENSIKK-NSFFTPLSYSREDCQMALSKSSTSLTQRW 120
           +SQ++Q+S DE++ N+QRFSSQ+R+ S+KK +S   P+++ RED Q+  S+SS+ L++RW
Sbjct: 61  FSQMTQSSIDELLINDQRFSSQERDLSLKKVSSCLPPINHKREDSQLVASRSSSGLSRRW 120

Query: 121 KSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQ 180
            S  + +SK Q+ EEL++R G +E SL++FG +LDS+ SDI+Q N+G K+V L+ E I Q
Sbjct: 121 SSASIGESKSQISEELEQRFGMMETSLSRFGMMLDSIQSDIMQANRGTKEVFLETERIQQ 180

Query: 181 KMLVNSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDAYQERLHEISDVLSSLEKQVQVS 240
           K+ +  +SLQ + KE  D KA+LDGG K I +   KD  QE+L +I  +L+++ +QV+ +
Sbjct: 181 KLTLQDTSLQQLRKEQADSKASLDGGVKFILEEFSKDPNQEKLQKILQMLTTIPEQVETA 240

Query: 241 QLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCV 300
             K++ +   TFT+E++ ++ +L+ P  +   R   +P+V+              +L  +
Sbjct: 241 LQKIQREICHTFTREIQ-VLASLRTPEPRV--RVPTAPQVKAKENLPEQRGQAAKVLTSL 300

Query: 301 SWKDLIANVRVL------------PVWMFHRKSDIDVKCMHFSQSASPN----VCIRATA 360
              +    V               PV   +   +  +K        +PN      ++   
Sbjct: 301 KMPEPRVQVPAAPQAKENFPEQRGPVAKSNSFCNTTLKTKQPQFPRNPNDASARAVKPYL 360

Query: 361 VQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEE-IERS 411
             K +VG WK+VK  K     S  KK   +K +  SE       +  V++DSDEE I+  
Sbjct: 361 SPKIQVGCWKTVKPEK-----SNFKKRATRKPVK-SESTRTQFEQCSVVIDSDEEDIDGG 417

BLAST of CaUC05G080640 vs. ExPASy Swiss-Prot
Match: Q75RY2 (Protein PAIR1 OS=Oryza sativa subsp. japonica OX=39947 GN=PAIR1 PE=1 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 6.0e-28
Identity = 104/309 (33.66%), Postives = 164/309 (53.07%), Query Frame = 0

Query: 1   MRLKINKACDLSSISVLPPQSRHARSNALTTGQQAPQLRSQP-------SQQSFSQGLSS 60
           M+LK+NKACD++SISVLPP+     S A  +G  A  + SQP       SQQSFSQG S+
Sbjct: 1   MKLKMNKACDIASISVLPPRRTGGSSGASASGSVAVAVASQPRSQPLSQSQQSFSQGASA 60

Query: 61  Q--HGMYSQLSQNSFDEVV-------TNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMA 120
              H   SQ SQ S D+ +       T +QRF   D  +    +   +  S +RE+ Q+ 
Sbjct: 61  SLLHSQ-SQFSQVSLDDNLLTLLPSPTRDQRFGLHDDSSKRMSSLPASSASCAREESQLQ 120

Query: 121 LSKSSTSLTQRWKSTPLPDSKCQV-GEELDRRLGTIENSLNKFGKILDSLHSDILQLNKG 180
           L+K  ++   RW  +       QV  E+++R+   + +S++K G ++DS+ SD++QLN+ 
Sbjct: 121 LAKLPSNPVHRWNPSIADTRSGQVTNEDVERKFQHLASSVHKMGMVVDSVQSDVMQLNRA 180

Query: 181 MKQVSLDVEGIWQKMLVNSSSLQSMNKEHDDMKATLDGGFKLISDLLK-KDAYQERLHEI 240
           MK+ SLD   I QK+ V  SSLQ + K  DD+KA      K   D     ++   +L+EI
Sbjct: 181 MKEASLDSGSIRQKIAVLESSLQQILKGQDDLKALFGSSTKHNPDQTSVLNSLGSKLNEI 240

Query: 241 SDVLSSLEKQVQVSQLKLKNDFI----STFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRF 288
           S  L++L+ Q+Q  QL+     +    ++ + E+ + + TL+  +Q    R ++    R 
Sbjct: 241 SSTLATLQTQMQARQLQGDQTTVLNSNASKSNEISSTLATLQTQMQA-DIRQLRCDVFRV 300

BLAST of CaUC05G080640 vs. ExPASy TrEMBL
Match: A0A1S3AVJ5 (protein PAIR1 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483272 PE=4 SV=1)

HSP 1 Score: 597.8 bits (1540), Expect = 3.4e-167
Identity = 331/410 (80.73%), Postives = 344/410 (83.90%), Query Frame = 0

Query: 1   MRLKINKACDLSSISVLPPQSRHARSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60
           MRLKINKACDLSSISVLPPQSR  R NALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ
Sbjct: 1   MRLKINKACDLSSISVLPPQSR--RLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60

Query: 61  LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQRWKSTP 120
           LSQNSFDEVVTNEQRFSSQDRENSIKKNSFF PLSYS+EDCQ+ LSKSSTSLTQ+W+ +P
Sbjct: 61  LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSP 120

Query: 121 LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLV 180
           L DSKCQVGEELDRRLGTIENSLNKFGKILDSL SDILQLNKGMKQVSLDVE IWQKMLV
Sbjct: 121 LTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLV 180

Query: 181 NSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDAYQERLHEISDVLSSLEKQVQVSQLKL 240
           NSS LQSMNK+HDDMKA +DGGFKLISD LKKDAYQERLHEISD LSSLEKQVQ SQLKL
Sbjct: 181 NSSLLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKL 240

Query: 241 KNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKD 300
           KNDFISTFT+EMKA++ TLK PLQKFPP SIQSPE       R+  L V           
Sbjct: 241 KNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPE-------RTACLDV----------- 300

Query: 301 LIANVRVLPVWMFHRKSDIDVKCMHFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCT 360
                   P    HR       C    QSASPNVC +ATAVQKEEVG WKSVKVGK FCT
Sbjct: 301 --------PKQKRHR-------CK--IQSASPNVCTQATAVQKEEVGMWKSVKVGKAFCT 360

Query: 361 SSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG 411
           SSVV +DDP KVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG
Sbjct: 361 SSVVTRDDPNKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG 373

BLAST of CaUC05G080640 vs. ExPASy TrEMBL
Match: A0A1S3AV35 (protein PAIR1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483272 PE=4 SV=1)

HSP 1 Score: 593.2 bits (1528), Expect = 8.4e-166
Identity = 331/411 (80.54%), Postives = 344/411 (83.70%), Query Frame = 0

Query: 1   MRLKINKACDLSSISVLPPQSRHARSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60
           MRLKINKACDLSSISVLPPQSR  R NALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ
Sbjct: 1   MRLKINKACDLSSISVLPPQSR--RLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60

Query: 61  LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQRWKSTP 120
           LSQNSFDEVVTNEQRFSSQDRENSIKKNSFF PLSYS+EDCQ+ LSKSSTSLTQ+W+ +P
Sbjct: 61  LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSP 120

Query: 121 LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLV 180
           L DSKCQVGEELDRRLGTIENSLNKFGKILDSL SDILQLNKGMKQVSLDVE IWQKMLV
Sbjct: 121 LTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLV 180

Query: 181 NSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDAYQERLHEISDVLSSLEKQVQVSQLKL 240
           NSS LQSMNK+HDDMKA +DGGFKLISD LKKDAYQERLHEISD LSSLEKQVQ SQLKL
Sbjct: 181 NSSLLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKL 240

Query: 241 KNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKD 300
           KNDFISTFT+EMKA++ TLK PLQKFPP SIQSPE       R+  L V           
Sbjct: 241 KNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPE-------RTACLDV----------- 300

Query: 301 LIANVRVLPVWMFHRKSDIDVKCMHFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCT 360
                   P    HR       C    QSASPNVC +ATAVQKEEVG WKSVKVGK FCT
Sbjct: 301 --------PKQKRHR-------CK--IQSASPNVCTQATAVQKEEVGMWKSVKVGKAFCT 360

Query: 361 SSVVKKDDPKKVIPFSE-QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG 411
           SSVV +DDP KVIPFSE QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG
Sbjct: 361 SSVVTRDDPNKVIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG 374

BLAST of CaUC05G080640 vs. ExPASy TrEMBL
Match: A0A1S4DSK1 (protein PAIR1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483272 PE=4 SV=1)

HSP 1 Score: 592.8 bits (1527), Expect = 1.1e-165
Identity = 331/412 (80.34%), Postives = 344/412 (83.50%), Query Frame = 0

Query: 1   MRLKINKACDLSSISVLPPQSRHARSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60
           MRLKINKACDLSSISVLPPQSR  R NALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ
Sbjct: 1   MRLKINKACDLSSISVLPPQSR--RLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60

Query: 61  LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQRWKSTP 120
           LSQNSFDEVVTNEQRFSSQDRENSIKKNSFF PLSYS+EDCQ+ LSKSSTSLTQ+W+ +P
Sbjct: 61  LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSP 120

Query: 121 LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLV 180
           L DSKCQVGEELDRRLGTIENSLNKFGKILDSL SDILQLNKGMKQVSLDVE IWQKMLV
Sbjct: 121 LTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLV 180

Query: 181 NSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDAYQERLHEISDVLSSLEKQVQVSQLKL 240
           NSS LQSMNK+HDDMKA +DGGFKLISD LKKDAYQERLHEISD LSSLEKQVQ SQLKL
Sbjct: 181 NSSLLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKL 240

Query: 241 KNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKD 300
           KNDFISTFT+EMKA++ TLK PLQKFPP SIQSPE       R+  L V           
Sbjct: 241 KNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPE-------RTACLDV----------- 300

Query: 301 LIANVRVLPVWMFHRKSDIDVKCMHFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCT 360
                   P    HR       C    QSASPNVC +ATAVQKEEVG WKSVKVGK FCT
Sbjct: 301 --------PKQKRHR-------CK--IQSASPNVCTQATAVQKEEVGMWKSVKVGKAFCT 360

Query: 361 SSVVKKDDPKKVIPFSE--QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG 411
           SSVV +DDP KVIPFSE  QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG
Sbjct: 361 SSVVTRDDPNKVIPFSEQQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG 375

BLAST of CaUC05G080640 vs. ExPASy TrEMBL
Match: A0A6J1FY69 (protein PAIR1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448385 PE=4 SV=1)

HSP 1 Score: 592.0 bits (1525), Expect = 1.9e-165
Identity = 325/411 (79.08%), Postives = 345/411 (83.94%), Query Frame = 0

Query: 1   MRLKINKACDLSSISVLPPQSRHARSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60
           MRLKINKACDLSSISVLPPQS  +RSNALTTGQQAPQLRSQPSQQSFSQGLSS HG  SQ
Sbjct: 1   MRLKINKACDLSSISVLPPQS--SRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQ 60

Query: 61  LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQRWKSTP 120
            SQNSFDEVVTNEQRFSSQDRENSIKKNSFF PLSYSRE+CQ+ LSKSSTSLTQRWKSTP
Sbjct: 61  FSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTP 120

Query: 121 LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLV 180
           LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLH DIL LN+GMKQ+SLDVEGIWQK++V
Sbjct: 121 LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIV 180

Query: 181 NSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDAYQERLHEISDVLSSLEKQVQVSQLKL 240
           NSS LQSMNKEHDDMK+TLDGGFKLISD LKKDAYQERLHEISDVLS+LEKQVQ SQLKL
Sbjct: 181 NSSLLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKL 240

Query: 241 KNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKD 300
           +NDFISTFTQEMKA+VCTLK PLQKFP R I+SPE                         
Sbjct: 241 RNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPE------------------------- 300

Query: 301 LIANVRVLPVWMFHRKSDIDVKCMHFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCT 360
              +   L V    R+     +C    QSASP+VCIRATAVQ EEVGRWKSVKVGKTFCT
Sbjct: 301 ---STASLDVPQQKRR-----RCK--IQSASPDVCIRATAVQTEEVGRWKSVKVGKTFCT 360

Query: 361 SSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGD 412
           S+V KK+D KK IPFSEQ LV+EREYRVIVDSDEEIERSFSCLIEEKKTG+
Sbjct: 361 STVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTGE 374

BLAST of CaUC05G080640 vs. ExPASy TrEMBL
Match: A0A6J1FTV4 (protein PAIR1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448385 PE=4 SV=1)

HSP 1 Score: 591.3 bits (1523), Expect = 3.2e-165
Identity = 325/411 (79.08%), Postives = 344/411 (83.70%), Query Frame = 0

Query: 1   MRLKINKACDLSSISVLPPQSRHARSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60
           MRLKINKACDLSSISVLPPQS   RSNALTTGQQAPQLRSQPSQQSFSQGLSS HG  SQ
Sbjct: 1   MRLKINKACDLSSISVLPPQS---RSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQ 60

Query: 61  LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQRWKSTP 120
            SQNSFDEVVTNEQRFSSQDRENSIKKNSFF PLSYSRE+CQ+ LSKSSTSLTQRWKSTP
Sbjct: 61  FSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTP 120

Query: 121 LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLV 180
           LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLH DIL LN+GMKQ+SLDVEGIWQK++V
Sbjct: 121 LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIV 180

Query: 181 NSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDAYQERLHEISDVLSSLEKQVQVSQLKL 240
           NSS LQSMNKEHDDMK+TLDGGFKLISD LKKDAYQERLHEISDVLS+LEKQVQ SQLKL
Sbjct: 181 NSSLLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKL 240

Query: 241 KNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKD 300
           +NDFISTFTQEMKA+VCTLK PLQKFP R I+SPE                         
Sbjct: 241 RNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPE------------------------- 300

Query: 301 LIANVRVLPVWMFHRKSDIDVKCMHFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCT 360
              +   L V    R+     +C    QSASP+VCIRATAVQ EEVGRWKSVKVGKTFCT
Sbjct: 301 ---STASLDVPQQKRR-----RCK--IQSASPDVCIRATAVQTEEVGRWKSVKVGKTFCT 360

Query: 361 SSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGD 412
           S+V KK+D KK IPFSEQ LV+EREYRVIVDSDEEIERSFSCLIEEKKTG+
Sbjct: 361 STVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTGE 373

BLAST of CaUC05G080640 vs. TAIR 10
Match: AT1G01690.1 (putative recombination initiation defects 3 )

HSP 1 Score: 226.1 bits (575), Expect = 5.2e-59
Identity = 159/431 (36.89%), Postives = 242/431 (56.15%), Query Frame = 0

Query: 1   MRLKINKACDLSSISVLPPQSRHARSNALTTGQQAPQLRSQPSQQSFSQGLSSQH---GM 60
           M++ INKACDL SISV PP  R +        Q + QLRSQ SQQSFSQG SS     G 
Sbjct: 1   MKMNINKACDLKSISVFPPNLRRS-----AEPQASQQLRSQQSQQSFSQGPSSSQRGCGG 60

Query: 61  YSQLSQNSFDEVVTNEQRFSSQDRENSIKK-NSFFTPLSYSREDCQMALSKSSTSLTQRW 120
           +SQ++Q+S DE++ N+QRFSSQ+R+ S+KK +S   P+++ RED Q+  S+SS+ L++RW
Sbjct: 61  FSQMTQSSIDELLINDQRFSSQERDLSLKKVSSCLPPINHKREDSQLVASRSSSGLSRRW 120

Query: 121 KSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQ 180
            S  + +SK Q+ EEL++R G +E SL++FG +LDS+ SDI+Q N+G K+V L+ E I Q
Sbjct: 121 SSASIGESKSQISEELEQRFGMMETSLSRFGMMLDSIQSDIMQANRGTKEVFLETERIQQ 180

Query: 181 KMLVNSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDAYQERLHEISDVLSSLEKQVQVS 240
           K+ +  +SLQ + KE  D KA+LDGG K I +   KD  QE+L +I  +L+++ +QV+ +
Sbjct: 181 KLTLQDTSLQQLRKEQADSKASLDGGVKFILEEFSKDPNQEKLQKILQMLTTIPEQVETA 240

Query: 241 QLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCV 300
             K++ +   TFT+E++ ++ +L+ P  +   R   +P+V+              +L  +
Sbjct: 241 LQKIQREICHTFTREIQ-VLASLRTPEPRV--RVPTAPQVKAKENLPEQRGQAAKVLTSL 300

Query: 301 SWKDLIANVRVL------------PVWMFHRKSDIDVKCMHFSQSASPN----VCIRATA 360
              +    V               PV   +   +  +K        +PN      ++   
Sbjct: 301 KMPEPRVQVPAAPQAKENFPEQRGPVAKSNSFCNTTLKTKQPQFPRNPNDASARAVKPYL 360

Query: 361 VQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEE-IERS 411
             K +VG WK+VK  K     S  KK   +K +  SE       +  V++DSDEE I+  
Sbjct: 361 SPKIQVGCWKTVKPEK-----SNFKKRATRKPVK-SESTRTQFEQCSVVIDSDEEDIDGG 417

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038882642.11.6e-17483.45putative recombination initiation defects 3 isoform X2 [Benincasa hispida][more]
XP_038882627.13.8e-17383.25putative recombination initiation defects 3 isoform X1 [Benincasa hispida] >XP_0... [more]
XP_008438048.17.0e-16780.73PREDICTED: protein PAIR1 isoform X3 [Cucumis melo][more]
KAG6597127.17.8e-16679.37putative recombination initiation defects 3, partial [Cucurbita argyrosperma sub... [more]
XP_023526420.11.3e-16579.81protein PAIR1-like isoform X2 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Q0WWX57.3e-5836.89Putative recombination initiation defects 3 OS=Arabidopsis thaliana OX=3702 GN=P... [more]
Q75RY26.0e-2833.66Protein PAIR1 OS=Oryza sativa subsp. japonica OX=39947 GN=PAIR1 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A1S3AVJ53.4e-16780.73protein PAIR1 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483272 PE=4 SV=1[more]
A0A1S3AV358.4e-16680.54protein PAIR1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483272 PE=4 SV=1[more]
A0A1S4DSK11.1e-16580.34protein PAIR1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483272 PE=4 SV=1[more]
A0A6J1FY691.9e-16579.08protein PAIR1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448385 PE=4 SV=1[more]
A0A6J1FTV43.2e-16579.08protein PAIR1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448385 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G01690.15.2e-5936.89putative recombination initiation defects 3 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 212..232
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..54
NoneNo IPR availablePANTHERPTHR37695:SF1RECOMBINATION INITIATION DEFECTS 3-RELATEDcoord: 1..410
IPR034546Protein PAIR1PANTHERPTHR37695RECOMBINATION INITIATION DEFECTS 3-RELATEDcoord: 1..410

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC05G080640.1CaUC05G080640.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051026 chiasma assembly
biological_process GO:0009553 embryo sac development
biological_process GO:0042138 meiotic DNA double-strand break formation
biological_process GO:0048236 plant-type sporogenesis
biological_process GO:0009555 pollen development
biological_process GO:0070192 chromosome organization involved in meiotic cell cycle