Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGGCTGAAGATAAACAAGGCCTGTGATCTCAGTTCTATCTCCGTTCTTCCTCCTCAATCCAGGCATGCGTCTGTTCTTTATTATTTTCAGCGTTATATTTTGTTTGAATTACTAGAATTCATGGATAACAATGCGCAAAGAAGTTTAGGTTGATATGTTGTGAACTCAGCAGCTTGACATTTTTTTAAGAACTTATTTCTTTCCCTTCTAGTTGTTTATCGTGTTGCGAGTTTTGAAGGATATGGATTTCCTTTTGGTCCTAGCTGCGTTCTTTATGTTTCAGAAGGAATTTGTTGTCTCCGAGCTTTTGAGAGATCGACATTTTAAATTTTACTGCAGATATTTCGAAATTTTTCTTTACTCACAGCTTAGTTTGATCTGTTCTATGATTGGATTGACTTCATTTTTGTCGGCACGATATTCAGTTACTTTAAGTTTGGATAAAAAGAACGGAGGAGTAAGAACTGGAAGGTTTCACACTATAATCTTATCATGAAATTGCAAGCTGAATACGCTGTAAACTTGATCCGATCTCTTGAGTTGTACGTCATTATTTTCAATTTTGTTCAGCGCAAAAATGTTCAAGGAAAATATGAAAATTTCTAGTGTATTCTAAAATAAAAATATGAATGGTCTTGATAATCTGTAGGAGGTCAAATGCGTTAACCACTGGGCAGCAAGCACCACAGTTGCGATCACAACCTTCGCAACAATCCTTTTCTCAGGGACTGTCATCTCAGCACGGCATGTATTCTCAACTTTCTCAGAACTCTTTTGACGAAGTCGTGACAAATGAACAGGTCAATCTCGGTTCTTCTCTGGATTTTCACATTTAGGACTTTGTTTCTCCATTAAGAAATGAAGGAAATGATACTAAAATGCTATCGCTCTTTGTCTTTCCTTGCGTATTAGCATTGAAGACAAAACTTGGAGATGGTTCTTTTCATTGTTTAGGAACTACTTATGAATTTTATTTTAATATCTATTTTTTGTCGTAACTAATTTACCAAAAAAAAGAAAAGATAAGGAAACTATCTCTTGAGTTCTTAAATTTAATTTGAGCTTTTCGTTTGCGTGCAATAAAGTTGTTGTTGCTTCTAAGGAAAAATGAACGAGAAAGAGTGAGTGTTTTTTTGTTCCTTGTATTTAGTTGTCCGGAGAGAACACTTCACTGATTACTGTTAAGCTTGCCAAGTCTTAGTTGTGTTACTGGTACACATAAATAATTCATATATATGTGTAATATGCTGGTATAGAATGGGGCTTTCTTGGCTGTCATTCCCATATCTAGTCTCTTCAGAATAGTAACCGATGCAATTTAAGAACATGTGAACACGCATGCGTCTTTCATGGTAAGCACTCTTTGAAACAATTCCCCTCACAGTAGAGCATTCCTTCAACTCTTCATTCTGCAGAATATTATCATATGCGTACCTTTAGTTATACAAAATGCTTATATGAATATGTTTGTGTGGGTATATATCTATTAAGACAGCGCCATGTTAAATGCTCTTAGTTTCTCATGCAATGAGGAACTGACTATGCCGTCGTATTAACTTGAAATAAAGTTCTATGATTATTGTGGCGTTCTTTCTGTTTTCATCTCATCTTATGAATTAACTTTGATGTACCACTTTTTGCGGCAGAGATTTAGCTCTCAAGACCGAGAAAACTCAATTAAGAAGAATTCCTTTTTTACTCCTCTAAGTTACTCCAGAGAAGATTGCCAAATGGCACTCTCTAAATCTTCAACCAGTCTAACACAAAGATGGAAATCAACTCCTCTTCCGGACTCTAAGTGTAAGTTCACTATCTTGGACTCATATGACAGACTTAAAACTGTTCCAATAAGTTCGTTTGATTTCATTACAGCGTGGTATAACTGTTTGAGTAGGGTAAGTTGATCAACTGCCATTTCTTACAACCTTTATATCTTTCGTGACTTGATTTCATAGTTTAGCTTTCCTTTTCAGGTCAAGTTGGTGAAGAACTTGACCGCCGCCTTGGAACCATAGAAAACTCATTAAACAAGTTTGGAAAGATCTTGGATTCTCTTCACAGTGATATCCTGCAACTAAACAAAGGGATGAAGCAAGTTTCTCTGGATGGTGAGCTTTGCAATCCCTCAGGCTGTATAAAGTTGGATGAGAAACTATGTATTACTGCTTGAAAAACACTTTCTGCACTGAAACCTGATGTGTTTGTTCCTCAAGTAGGAACAAAGGTGATGAATATGCTTTATTTGAATTTCAATTCCTTCATAAAGTAGGATTAAGATTGCTATGTTATGAATGTGTAAAGGGAAAGTGCTCAAATCAGTACAAAATCCTGACCTCAAATTTGAAGCTTCAAGGCAAAAGTATATTAAAATAATATGCTTATTTATTTTTCAAATTGCAGTGGAAGGCATATGGCAAAAGATGCTTGTTAACAGTAGCTCGCTACAATCCATGGTAAAATTGTACTAGATCAATACAATATTTTATTGACCATTAAGTTTCTTTAATTTTAATTGTAATGTCTAAATTGTGCATTCAACTAATGAGCGCAAAGTTCAATGTCAGAACAAAGAGCACGATGACATGAAAGCTACCCTCGATGGAGGCTTCAAATTGATATCCGATCTGCTTAAGAAGGATGCATACCAAGAAAGGCTACATGAGATTTCCGATGTTCTTTCTTCATTGGAAAAGCAAGTACAAGTATCTCAACTGAAATTAAAAAATGACTTCATCAGCACATTCACCCAAGAAATGAAGGTCAGTGCATGCTGTATCAAGTATTGCTATAAATGTACGATAAAAAGGATTTGCCTCCTAACTCCATTCCGGCTATTTATACATATTCGTAAAAGTACCCTGCCTAAATTTGTATTCTACTTATTCGTCATTAACTTGTAGGCAATTGTCTGTACCTTGAAGAACCCCTTGCAGAAATTTCCACCTCGCTCTATTCAATCTCCTGAGGTTCGGTTTCTTACGAAATATCGGTCAAATGTCTTAGGCGTTTGTTTCATCCTGAACTGTGTCTCATGGAAGGATTTAATTGCAAATGTCAGGGTACTGCCTGTTTGGATGTTCCACCGCAAAAGCGACATCGATGTAAAATGTATGCATTTCAGGTTTCATAATAACTAACTTGATTCCTTGTGTTTTCATCCATTTCAGATGCAGAAAGTTGTCATATTATAAATGAATAAATTACTGATAATGGTGAATGGGATTAGATTGAATTGATGTATTCCAATCTGAGGGTTCAACTTTCCCTTCTAATGCACAAAATGTAGAATTAGTGACCTACAAAAGCTCAATGGTATCTTCCATTCCCGTATATTTTATGGCTCTGATTTATAGCAGTCTGGAAGTTCTCAAGGGGATTATGTGTTATATTCCATTAAATACTATCATATTCCATACGTAGTATAAGCGAGGAGGAAAGAAATTTCCATTTGTCGGTAATGTTATCTTAATGTGGCATGAAAAATCATACTCTTGAGCAGCCACAATATTCTGGTGATTGTTGATGAACTATGGAATTATATGTATTGGTTCTTTGTTGCTTAGCATCTTAAGAGAACTTACTTTTTCCACTTAATATCAGTCAATCTGCGTCTCCAAATGTTTGCATTCGAGCAACTGCAGTACAAAAGGAGGAAGTAGGACGGTGGAAATCAGTAAAAGTGGGAAAGACGTTTTGCACTAGCAGTGTGGTGAAAAAGGATGATCCAAAGAAAGTAATTCCATTTTCTGAACAGGTACCGATTTGAATTTCATTATGTTTCCTGCTATCACATTACCATTTATTGTGGAAATTGTGCTATTGCATTTTTTATAGCCAATATTAAGTTATTCCTTGATTATTGAACCCGAAATTTACACATTATTCTATGAAGCGGGTAATGATTTCACCTTGGATATTAGCAGTGCTTGGTGCTGGAAAGGGAATATAGAGTTATTGTTGATTCCGATGAGGAGATTGAAAGAAGTTTCTCCTGCTTAATTGAAGAGAAGAAAACAGGTGATTCCTGA
mRNA sequence
ATGCGGCTGAAGATAAACAAGGCCTGTGATCTCAGTTCTATCTCCGTTCTTCCTCCTCAATCCAGGCATGCGAGGTCAAATGCGTTAACCACTGGGCAGCAAGCACCACAGTTGCGATCACAACCTTCGCAACAATCCTTTTCTCAGGGACTGTCATCTCAGCACGGCATGTATTCTCAACTTTCTCAGAACTCTTTTGACGAAGTCGTGACAAATGAACAGAGATTTAGCTCTCAAGACCGAGAAAACTCAATTAAGAAGAATTCCTTTTTTACTCCTCTAAGTTACTCCAGAGAAGATTGCCAAATGGCACTCTCTAAATCTTCAACCAGTCTAACACAAAGATGGAAATCAACTCCTCTTCCGGACTCTAAGTGTCAAGTTGGTGAAGAACTTGACCGCCGCCTTGGAACCATAGAAAACTCATTAAACAAGTTTGGAAAGATCTTGGATTCTCTTCACAGTGATATCCTGCAACTAAACAAAGGGATGAAGCAAGTTTCTCTGGATGTGGAAGGCATATGGCAAAAGATGCTTGTTAACAGTAGCTCGCTACAATCCATGAACAAAGAGCACGATGACATGAAAGCTACCCTCGATGGAGGCTTCAAATTGATATCCGATCTGCTTAAGAAGGATGCATACCAAGAAAGGCTACATGAGATTTCCGATGTTCTTTCTTCATTGGAAAAGCAAGTACAAGTATCTCAACTGAAATTAAAAAATGACTTCATCAGCACATTCACCCAAGAAATGAAGGCAATTGTCTGTACCTTGAAGAACCCCTTGCAGAAATTTCCACCTCGCTCTATTCAATCTCCTGAGGTTCGGTTTCTTACGAAATATCGGTCAAATGTCTTAGGCGTTTGTTTCATCCTGAACTGTGTCTCATGGAAGGATTTAATTGCAAATGTCAGGGTACTGCCTGTTTGGATGTTCCACCGCAAAAGCGACATCGATGTAAAATGTATGCATTTCAGTCAATCTGCGTCTCCAAATGTTTGCATTCGAGCAACTGCAGTACAAAAGGAGGAAGTAGGACGGTGGAAATCAGTAAAAGTGGGAAAGACGTTTTGCACTAGCAGTGTGGTGAAAAAGGATGATCCAAAGAAAGTAATTCCATTTTCTGAACAGTGCTTGGTGCTGGAAAGGGAATATAGAGTTATTGTTGATTCCGATGAGGAGATTGAAAGAAGTTTCTCCTGCTTAATTGAAGAGAAGAAAACAGGTGATTCCTGA
Coding sequence (CDS)
ATGCGGCTGAAGATAAACAAGGCCTGTGATCTCAGTTCTATCTCCGTTCTTCCTCCTCAATCCAGGCATGCGAGGTCAAATGCGTTAACCACTGGGCAGCAAGCACCACAGTTGCGATCACAACCTTCGCAACAATCCTTTTCTCAGGGACTGTCATCTCAGCACGGCATGTATTCTCAACTTTCTCAGAACTCTTTTGACGAAGTCGTGACAAATGAACAGAGATTTAGCTCTCAAGACCGAGAAAACTCAATTAAGAAGAATTCCTTTTTTACTCCTCTAAGTTACTCCAGAGAAGATTGCCAAATGGCACTCTCTAAATCTTCAACCAGTCTAACACAAAGATGGAAATCAACTCCTCTTCCGGACTCTAAGTGTCAAGTTGGTGAAGAACTTGACCGCCGCCTTGGAACCATAGAAAACTCATTAAACAAGTTTGGAAAGATCTTGGATTCTCTTCACAGTGATATCCTGCAACTAAACAAAGGGATGAAGCAAGTTTCTCTGGATGTGGAAGGCATATGGCAAAAGATGCTTGTTAACAGTAGCTCGCTACAATCCATGAACAAAGAGCACGATGACATGAAAGCTACCCTCGATGGAGGCTTCAAATTGATATCCGATCTGCTTAAGAAGGATGCATACCAAGAAAGGCTACATGAGATTTCCGATGTTCTTTCTTCATTGGAAAAGCAAGTACAAGTATCTCAACTGAAATTAAAAAATGACTTCATCAGCACATTCACCCAAGAAATGAAGGCAATTGTCTGTACCTTGAAGAACCCCTTGCAGAAATTTCCACCTCGCTCTATTCAATCTCCTGAGGTTCGGTTTCTTACGAAATATCGGTCAAATGTCTTAGGCGTTTGTTTCATCCTGAACTGTGTCTCATGGAAGGATTTAATTGCAAATGTCAGGGTACTGCCTGTTTGGATGTTCCACCGCAAAAGCGACATCGATGTAAAATGTATGCATTTCAGTCAATCTGCGTCTCCAAATGTTTGCATTCGAGCAACTGCAGTACAAAAGGAGGAAGTAGGACGGTGGAAATCAGTAAAAGTGGGAAAGACGTTTTGCACTAGCAGTGTGGTGAAAAAGGATGATCCAAAGAAAGTAATTCCATTTTCTGAACAGTGCTTGGTGCTGGAAAGGGAATATAGAGTTATTGTTGATTCCGATGAGGAGATTGAAAGAAGTTTCTCCTGCTTAATTGAAGAGAAGAAAACAGGTGATTCCTGA
Protein sequence
MRLKINKACDLSSISVLPPQSRHARSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLVNSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDAYQERLHEISDVLSSLEKQVQVSQLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKDLIANVRVLPVWMFHRKSDIDVKCMHFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGDS
Homology
BLAST of CaUC05G080640 vs. NCBI nr
Match:
XP_038882642.1 (putative recombination initiation defects 3 isoform X2 [Benincasa hispida])
HSP 1 Score: 623.2 bits (1606), Expect = 1.6e-174
Identity = 343/411 (83.45%), Postives = 354/411 (86.13%), Query Frame = 0
Query: 1 MRLKINKACDLSSISVLPPQSRHARSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60
MRLKINKACDLSSISVLPP SR RSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ
Sbjct: 1 MRLKINKACDLSSISVLPPHSR--RSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60
Query: 61 LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQRWKSTP 120
LSQNSFDEVVTNEQRFSSQDRENSIKKNSFF PLSYSREDCQ+ALSKSSTSLTQRWK TP
Sbjct: 61 LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREDCQLALSKSSTSLTQRWKPTP 120
Query: 121 LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLV 180
LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQ+SLDVEGIWQKMLV
Sbjct: 121 LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMLV 180
Query: 181 NSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDAYQERLHEISDVLSSLEKQVQVSQLKL 240
NSSSLQSMNK+HDDMKATLDGGFKLIS+ LKKDAYQERL+EIS+VLSSLEKQVQ SQLKL
Sbjct: 181 NSSSLQSMNKDHDDMKATLDGGFKLISNQLKKDAYQERLNEISNVLSSLEKQVQASQLKL 240
Query: 241 KNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKD 300
KNDFISTFTQE+KA+VCTLKNPLQKFPP SIQSPE C+
Sbjct: 241 KNDFISTFTQEIKAMVCTLKNPLQKFPPHSIQSPE----------------STACLD--- 300
Query: 301 LIANVRVLPVWMFHRKSDIDVKCMHFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCT 360
+P HR C QSASPNVCIRAT VQKEEVGRWKSVKVGKTFCT
Sbjct: 301 -------VPQQKRHR-------CK--IQSASPNVCIRATTVQKEEVGRWKSVKVGKTFCT 360
Query: 361 SSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGD 412
SV KKDDPKKVIPFSEQ LVLEREYRVIVDSDEEIERSFSCLIEEKKTG+
Sbjct: 361 GSVAKKDDPKKVIPFSEQRLVLEREYRVIVDSDEEIERSFSCLIEEKKTGE 374
BLAST of CaUC05G080640 vs. NCBI nr
Match:
XP_038882627.1 (putative recombination initiation defects 3 isoform X1 [Benincasa hispida] >XP_038882635.1 putative recombination initiation defects 3 isoform X1 [Benincasa hispida])
HSP 1 Score: 618.6 bits (1594), Expect = 3.8e-173
Identity = 343/412 (83.25%), Postives = 354/412 (85.92%), Query Frame = 0
Query: 1 MRLKINKACDLSSISVLPPQSRHARSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60
MRLKINKACDLSSISVLPP SR RSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ
Sbjct: 1 MRLKINKACDLSSISVLPPHSR--RSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60
Query: 61 LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQRWKSTP 120
LSQNSFDEVVTNEQRFSSQDRENSIKKNSFF PLSYSREDCQ+ALSKSSTSLTQRWK TP
Sbjct: 61 LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREDCQLALSKSSTSLTQRWKPTP 120
Query: 121 LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLV 180
LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQ+SLDVEGIWQKMLV
Sbjct: 121 LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMLV 180
Query: 181 NSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDAYQERLHEISDVLSSLEKQVQVSQLKL 240
NSSSLQSMNK+HDDMKATLDGGFKLIS+ LKKDAYQERL+EIS+VLSSLEKQVQ SQLKL
Sbjct: 181 NSSSLQSMNKDHDDMKATLDGGFKLISNQLKKDAYQERLNEISNVLSSLEKQVQASQLKL 240
Query: 241 KNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKD 300
KNDFISTFTQE+KA+VCTLKNPLQKFPP SIQSPE C+
Sbjct: 241 KNDFISTFTQEIKAMVCTLKNPLQKFPPHSIQSPE----------------STACLD--- 300
Query: 301 LIANVRVLPVWMFHRKSDIDVKCMHFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCT 360
+P HR C QSASPNVCIRAT VQKEEVGRWKSVKVGKTFCT
Sbjct: 301 -------VPQQKRHR-------CK--IQSASPNVCIRATTVQKEEVGRWKSVKVGKTFCT 360
Query: 361 SSVVKKDDPKKVIPFSE-QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGD 412
SV KKDDPKKVIPFSE Q LVLEREYRVIVDSDEEIERSFSCLIEEKKTG+
Sbjct: 361 GSVAKKDDPKKVIPFSEQQRLVLEREYRVIVDSDEEIERSFSCLIEEKKTGE 375
BLAST of CaUC05G080640 vs. NCBI nr
Match:
XP_008438048.1 (PREDICTED: protein PAIR1 isoform X3 [Cucumis melo])
HSP 1 Score: 597.8 bits (1540), Expect = 7.0e-167
Identity = 331/410 (80.73%), Postives = 344/410 (83.90%), Query Frame = 0
Query: 1 MRLKINKACDLSSISVLPPQSRHARSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60
MRLKINKACDLSSISVLPPQSR R NALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ
Sbjct: 1 MRLKINKACDLSSISVLPPQSR--RLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60
Query: 61 LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQRWKSTP 120
LSQNSFDEVVTNEQRFSSQDRENSIKKNSFF PLSYS+EDCQ+ LSKSSTSLTQ+W+ +P
Sbjct: 61 LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSP 120
Query: 121 LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLV 180
L DSKCQVGEELDRRLGTIENSLNKFGKILDSL SDILQLNKGMKQVSLDVE IWQKMLV
Sbjct: 121 LTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLV 180
Query: 181 NSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDAYQERLHEISDVLSSLEKQVQVSQLKL 240
NSS LQSMNK+HDDMKA +DGGFKLISD LKKDAYQERLHEISD LSSLEKQVQ SQLKL
Sbjct: 181 NSSLLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKL 240
Query: 241 KNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKD 300
KNDFISTFT+EMKA++ TLK PLQKFPP SIQSPE R+ L V
Sbjct: 241 KNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPE-------RTACLDV----------- 300
Query: 301 LIANVRVLPVWMFHRKSDIDVKCMHFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCT 360
P HR C QSASPNVC +ATAVQKEEVG WKSVKVGK FCT
Sbjct: 301 --------PKQKRHR-------CK--IQSASPNVCTQATAVQKEEVGMWKSVKVGKAFCT 360
Query: 361 SSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG 411
SSVV +DDP KVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG
Sbjct: 361 SSVVTRDDPNKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG 373
BLAST of CaUC05G080640 vs. NCBI nr
Match:
KAG6597127.1 (putative recombination initiation defects 3, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 594.3 bits (1531), Expect = 7.8e-166
Identity = 327/412 (79.37%), Postives = 345/412 (83.74%), Query Frame = 0
Query: 1 MRLKINKACDLSSISVLPPQSRHARSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60
MRLKINKACDLSSISVLPPQS RSNALTTGQQAPQLRSQPSQQSFSQGLSS HG SQ
Sbjct: 1 MRLKINKACDLSSISVLPPQS---RSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQ 60
Query: 61 LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQRWKSTP 120
SQNSFDEVVTNEQRFSSQDRENSIKKNSFF PLSYSRE+CQ+ LSKSSTSLTQRWKSTP
Sbjct: 61 FSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTP 120
Query: 121 LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLV 180
LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLH DIL LN+GMKQ+SLDVEGIWQK++V
Sbjct: 121 LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIV 180
Query: 181 NSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDAYQERLHEISDVLSSLEKQVQVSQLKL 240
NSS LQSMNKEHDDMK+TLDGGFKLISD LKKDAYQERLHEISDVLS+LEKQVQ SQLKL
Sbjct: 181 NSSLLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKL 240
Query: 241 KNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKD 300
+NDFISTFTQEMKA+VCTLK PLQKFP R I+SPE
Sbjct: 241 RNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPE------------------------- 300
Query: 301 LIANVRVLPVWMFHRKSDIDVKCMHFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCT 360
+ L V R+ +C QSASP+VCIRATAVQ EEVGRWKSVKVGKTFCT
Sbjct: 301 ---STASLDVPQQKRR-----RCK--IQSASPDVCIRATAVQTEEVGRWKSVKVGKTFCT 360
Query: 361 SSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGDS 413
S+V KK+D KK IPFSEQ LV+EREYRVIVDSDEEIERSFSCLIEEKKTGDS
Sbjct: 361 STVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTGDS 374
BLAST of CaUC05G080640 vs. NCBI nr
Match:
XP_023526420.1 (protein PAIR1-like isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 593.6 bits (1529), Expect = 1.3e-165
Identity = 328/411 (79.81%), Postives = 345/411 (83.94%), Query Frame = 0
Query: 1 MRLKINKACDLSSISVLPPQSRHARSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60
MRLKINKACDLSSISVLPPQSR RSNALTTGQQAPQLRSQPSQQSFS GLSS+HGMYSQ
Sbjct: 1 MRLKINKACDLSSISVLPPQSR--RSNALTTGQQAPQLRSQPSQQSFSLGLSSEHGMYSQ 60
Query: 61 LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQRWKSTP 120
LSQNSFDEVVTNEQRFSSQDRENSIKKNSFF P S+ REDCQ++LSKSSTSLTQRWKSTP
Sbjct: 61 LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPP-SFFREDCQLSLSKSSTSLTQRWKSTP 120
Query: 121 LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLV 180
LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQ+SLDVEGIWQKM++
Sbjct: 121 LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMII 180
Query: 181 NSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDAYQERLHEISDVLSSLEKQVQVSQLKL 240
+SS LQSMNKEHDDMKATLDGGFKLISD LK DAYQER+HEISDVLS+LEKQVQ S LKL
Sbjct: 181 SSSLLQSMNKEHDDMKATLDGGFKLISDQLKNDAYQERVHEISDVLSALEKQVQASHLKL 240
Query: 241 KNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKD 300
KNDFISTFTQEM A+VCTLK PL+KFPP S +PE C L+ K
Sbjct: 241 KNDFISTFTQEMNAMVCTLKKPLKKFPPHS--TPEST-----------TC--LDAPQQKR 300
Query: 301 LIANVRVLPVWMFHRKSDIDVKCMHFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCT 360
L + Q ASPNVCIRATAVQ EEVGRWKSVKV K FCT
Sbjct: 301 LRCKI----------------------QPASPNVCIRATAVQSEEVGRWKSVKVEKAFCT 360
Query: 361 SSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGD 412
SSVVKK+DPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG+
Sbjct: 361 SSVVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGE 371
BLAST of CaUC05G080640 vs. ExPASy Swiss-Prot
Match:
Q0WWX5 (Putative recombination initiation defects 3 OS=Arabidopsis thaliana OX=3702 GN=PRD3 PE=1 SV=2)
HSP 1 Score: 226.1 bits (575), Expect = 7.3e-58
Identity = 159/431 (36.89%), Postives = 242/431 (56.15%), Query Frame = 0
Query: 1 MRLKINKACDLSSISVLPPQSRHARSNALTTGQQAPQLRSQPSQQSFSQGLSSQH---GM 60
M++ INKACDL SISV PP R + Q + QLRSQ SQQSFSQG SS G
Sbjct: 1 MKMNINKACDLKSISVFPPNLRRS-----AEPQASQQLRSQQSQQSFSQGPSSSQRGCGG 60
Query: 61 YSQLSQNSFDEVVTNEQRFSSQDRENSIKK-NSFFTPLSYSREDCQMALSKSSTSLTQRW 120
+SQ++Q+S DE++ N+QRFSSQ+R+ S+KK +S P+++ RED Q+ S+SS+ L++RW
Sbjct: 61 FSQMTQSSIDELLINDQRFSSQERDLSLKKVSSCLPPINHKREDSQLVASRSSSGLSRRW 120
Query: 121 KSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQ 180
S + +SK Q+ EEL++R G +E SL++FG +LDS+ SDI+Q N+G K+V L+ E I Q
Sbjct: 121 SSASIGESKSQISEELEQRFGMMETSLSRFGMMLDSIQSDIMQANRGTKEVFLETERIQQ 180
Query: 181 KMLVNSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDAYQERLHEISDVLSSLEKQVQVS 240
K+ + +SLQ + KE D KA+LDGG K I + KD QE+L +I +L+++ +QV+ +
Sbjct: 181 KLTLQDTSLQQLRKEQADSKASLDGGVKFILEEFSKDPNQEKLQKILQMLTTIPEQVETA 240
Query: 241 QLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCV 300
K++ + TFT+E++ ++ +L+ P + R +P+V+ +L +
Sbjct: 241 LQKIQREICHTFTREIQ-VLASLRTPEPRV--RVPTAPQVKAKENLPEQRGQAAKVLTSL 300
Query: 301 SWKDLIANVRVL------------PVWMFHRKSDIDVKCMHFSQSASPN----VCIRATA 360
+ V PV + + +K +PN ++
Sbjct: 301 KMPEPRVQVPAAPQAKENFPEQRGPVAKSNSFCNTTLKTKQPQFPRNPNDASARAVKPYL 360
Query: 361 VQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEE-IERS 411
K +VG WK+VK K S KK +K + SE + V++DSDEE I+
Sbjct: 361 SPKIQVGCWKTVKPEK-----SNFKKRATRKPVK-SESTRTQFEQCSVVIDSDEEDIDGG 417
BLAST of CaUC05G080640 vs. ExPASy Swiss-Prot
Match:
Q75RY2 (Protein PAIR1 OS=Oryza sativa subsp. japonica OX=39947 GN=PAIR1 PE=1 SV=1)
HSP 1 Score: 126.7 bits (317), Expect = 6.0e-28
Identity = 104/309 (33.66%), Postives = 164/309 (53.07%), Query Frame = 0
Query: 1 MRLKINKACDLSSISVLPPQSRHARSNALTTGQQAPQLRSQP-------SQQSFSQGLSS 60
M+LK+NKACD++SISVLPP+ S A +G A + SQP SQQSFSQG S+
Sbjct: 1 MKLKMNKACDIASISVLPPRRTGGSSGASASGSVAVAVASQPRSQPLSQSQQSFSQGASA 60
Query: 61 Q--HGMYSQLSQNSFDEVV-------TNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMA 120
H SQ SQ S D+ + T +QRF D + + + S +RE+ Q+
Sbjct: 61 SLLHSQ-SQFSQVSLDDNLLTLLPSPTRDQRFGLHDDSSKRMSSLPASSASCAREESQLQ 120
Query: 121 LSKSSTSLTQRWKSTPLPDSKCQV-GEELDRRLGTIENSLNKFGKILDSLHSDILQLNKG 180
L+K ++ RW + QV E+++R+ + +S++K G ++DS+ SD++QLN+
Sbjct: 121 LAKLPSNPVHRWNPSIADTRSGQVTNEDVERKFQHLASSVHKMGMVVDSVQSDVMQLNRA 180
Query: 181 MKQVSLDVEGIWQKMLVNSSSLQSMNKEHDDMKATLDGGFKLISDLLK-KDAYQERLHEI 240
MK+ SLD I QK+ V SSLQ + K DD+KA K D ++ +L+EI
Sbjct: 181 MKEASLDSGSIRQKIAVLESSLQQILKGQDDLKALFGSSTKHNPDQTSVLNSLGSKLNEI 240
Query: 241 SDVLSSLEKQVQVSQLKLKNDFI----STFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRF 288
S L++L+ Q+Q QL+ + ++ + E+ + + TL+ +Q R ++ R
Sbjct: 241 SSTLATLQTQMQARQLQGDQTTVLNSNASKSNEISSTLATLQTQMQA-DIRQLRCDVFRV 300
BLAST of CaUC05G080640 vs. ExPASy TrEMBL
Match:
A0A1S3AVJ5 (protein PAIR1 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483272 PE=4 SV=1)
HSP 1 Score: 597.8 bits (1540), Expect = 3.4e-167
Identity = 331/410 (80.73%), Postives = 344/410 (83.90%), Query Frame = 0
Query: 1 MRLKINKACDLSSISVLPPQSRHARSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60
MRLKINKACDLSSISVLPPQSR R NALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ
Sbjct: 1 MRLKINKACDLSSISVLPPQSR--RLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60
Query: 61 LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQRWKSTP 120
LSQNSFDEVVTNEQRFSSQDRENSIKKNSFF PLSYS+EDCQ+ LSKSSTSLTQ+W+ +P
Sbjct: 61 LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSP 120
Query: 121 LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLV 180
L DSKCQVGEELDRRLGTIENSLNKFGKILDSL SDILQLNKGMKQVSLDVE IWQKMLV
Sbjct: 121 LTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLV 180
Query: 181 NSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDAYQERLHEISDVLSSLEKQVQVSQLKL 240
NSS LQSMNK+HDDMKA +DGGFKLISD LKKDAYQERLHEISD LSSLEKQVQ SQLKL
Sbjct: 181 NSSLLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKL 240
Query: 241 KNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKD 300
KNDFISTFT+EMKA++ TLK PLQKFPP SIQSPE R+ L V
Sbjct: 241 KNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPE-------RTACLDV----------- 300
Query: 301 LIANVRVLPVWMFHRKSDIDVKCMHFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCT 360
P HR C QSASPNVC +ATAVQKEEVG WKSVKVGK FCT
Sbjct: 301 --------PKQKRHR-------CK--IQSASPNVCTQATAVQKEEVGMWKSVKVGKAFCT 360
Query: 361 SSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG 411
SSVV +DDP KVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG
Sbjct: 361 SSVVTRDDPNKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG 373
BLAST of CaUC05G080640 vs. ExPASy TrEMBL
Match:
A0A1S3AV35 (protein PAIR1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483272 PE=4 SV=1)
HSP 1 Score: 593.2 bits (1528), Expect = 8.4e-166
Identity = 331/411 (80.54%), Postives = 344/411 (83.70%), Query Frame = 0
Query: 1 MRLKINKACDLSSISVLPPQSRHARSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60
MRLKINKACDLSSISVLPPQSR R NALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ
Sbjct: 1 MRLKINKACDLSSISVLPPQSR--RLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60
Query: 61 LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQRWKSTP 120
LSQNSFDEVVTNEQRFSSQDRENSIKKNSFF PLSYS+EDCQ+ LSKSSTSLTQ+W+ +P
Sbjct: 61 LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSP 120
Query: 121 LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLV 180
L DSKCQVGEELDRRLGTIENSLNKFGKILDSL SDILQLNKGMKQVSLDVE IWQKMLV
Sbjct: 121 LTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLV 180
Query: 181 NSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDAYQERLHEISDVLSSLEKQVQVSQLKL 240
NSS LQSMNK+HDDMKA +DGGFKLISD LKKDAYQERLHEISD LSSLEKQVQ SQLKL
Sbjct: 181 NSSLLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKL 240
Query: 241 KNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKD 300
KNDFISTFT+EMKA++ TLK PLQKFPP SIQSPE R+ L V
Sbjct: 241 KNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPE-------RTACLDV----------- 300
Query: 301 LIANVRVLPVWMFHRKSDIDVKCMHFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCT 360
P HR C QSASPNVC +ATAVQKEEVG WKSVKVGK FCT
Sbjct: 301 --------PKQKRHR-------CK--IQSASPNVCTQATAVQKEEVGMWKSVKVGKAFCT 360
Query: 361 SSVVKKDDPKKVIPFSE-QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG 411
SSVV +DDP KVIPFSE QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG
Sbjct: 361 SSVVTRDDPNKVIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG 374
BLAST of CaUC05G080640 vs. ExPASy TrEMBL
Match:
A0A1S4DSK1 (protein PAIR1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483272 PE=4 SV=1)
HSP 1 Score: 592.8 bits (1527), Expect = 1.1e-165
Identity = 331/412 (80.34%), Postives = 344/412 (83.50%), Query Frame = 0
Query: 1 MRLKINKACDLSSISVLPPQSRHARSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60
MRLKINKACDLSSISVLPPQSR R NALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ
Sbjct: 1 MRLKINKACDLSSISVLPPQSR--RLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60
Query: 61 LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQRWKSTP 120
LSQNSFDEVVTNEQRFSSQDRENSIKKNSFF PLSYS+EDCQ+ LSKSSTSLTQ+W+ +P
Sbjct: 61 LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSLTQKWRPSP 120
Query: 121 LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLV 180
L DSKCQVGEELDRRLGTIENSLNKFGKILDSL SDILQLNKGMKQVSLDVE IWQKMLV
Sbjct: 121 LTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLV 180
Query: 181 NSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDAYQERLHEISDVLSSLEKQVQVSQLKL 240
NSS LQSMNK+HDDMKA +DGGFKLISD LKKDAYQERLHEISD LSSLEKQVQ SQLKL
Sbjct: 181 NSSLLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVQASQLKL 240
Query: 241 KNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKD 300
KNDFISTFT+EMKA++ TLK PLQKFPP SIQSPE R+ L V
Sbjct: 241 KNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPE-------RTACLDV----------- 300
Query: 301 LIANVRVLPVWMFHRKSDIDVKCMHFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCT 360
P HR C QSASPNVC +ATAVQKEEVG WKSVKVGK FCT
Sbjct: 301 --------PKQKRHR-------CK--IQSASPNVCTQATAVQKEEVGMWKSVKVGKAFCT 360
Query: 361 SSVVKKDDPKKVIPFSE--QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG 411
SSVV +DDP KVIPFSE QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG
Sbjct: 361 SSVVTRDDPNKVIPFSEQQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG 375
BLAST of CaUC05G080640 vs. ExPASy TrEMBL
Match:
A0A6J1FY69 (protein PAIR1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448385 PE=4 SV=1)
HSP 1 Score: 592.0 bits (1525), Expect = 1.9e-165
Identity = 325/411 (79.08%), Postives = 345/411 (83.94%), Query Frame = 0
Query: 1 MRLKINKACDLSSISVLPPQSRHARSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60
MRLKINKACDLSSISVLPPQS +RSNALTTGQQAPQLRSQPSQQSFSQGLSS HG SQ
Sbjct: 1 MRLKINKACDLSSISVLPPQS--SRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQ 60
Query: 61 LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQRWKSTP 120
SQNSFDEVVTNEQRFSSQDRENSIKKNSFF PLSYSRE+CQ+ LSKSSTSLTQRWKSTP
Sbjct: 61 FSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTP 120
Query: 121 LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLV 180
LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLH DIL LN+GMKQ+SLDVEGIWQK++V
Sbjct: 121 LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIV 180
Query: 181 NSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDAYQERLHEISDVLSSLEKQVQVSQLKL 240
NSS LQSMNKEHDDMK+TLDGGFKLISD LKKDAYQERLHEISDVLS+LEKQVQ SQLKL
Sbjct: 181 NSSLLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKL 240
Query: 241 KNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKD 300
+NDFISTFTQEMKA+VCTLK PLQKFP R I+SPE
Sbjct: 241 RNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPE------------------------- 300
Query: 301 LIANVRVLPVWMFHRKSDIDVKCMHFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCT 360
+ L V R+ +C QSASP+VCIRATAVQ EEVGRWKSVKVGKTFCT
Sbjct: 301 ---STASLDVPQQKRR-----RCK--IQSASPDVCIRATAVQTEEVGRWKSVKVGKTFCT 360
Query: 361 SSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGD 412
S+V KK+D KK IPFSEQ LV+EREYRVIVDSDEEIERSFSCLIEEKKTG+
Sbjct: 361 STVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTGE 374
BLAST of CaUC05G080640 vs. ExPASy TrEMBL
Match:
A0A6J1FTV4 (protein PAIR1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448385 PE=4 SV=1)
HSP 1 Score: 591.3 bits (1523), Expect = 3.2e-165
Identity = 325/411 (79.08%), Postives = 344/411 (83.70%), Query Frame = 0
Query: 1 MRLKINKACDLSSISVLPPQSRHARSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQ 60
MRLKINKACDLSSISVLPPQS RSNALTTGQQAPQLRSQPSQQSFSQGLSS HG SQ
Sbjct: 1 MRLKINKACDLSSISVLPPQS---RSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQ 60
Query: 61 LSQNSFDEVVTNEQRFSSQDRENSIKKNSFFTPLSYSREDCQMALSKSSTSLTQRWKSTP 120
SQNSFDEVVTNEQRFSSQDRENSIKKNSFF PLSYSRE+CQ+ LSKSSTSLTQRWKSTP
Sbjct: 61 FSQNSFDEVVTNEQRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTP 120
Query: 121 LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLV 180
LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLH DIL LN+GMKQ+SLDVEGIWQK++V
Sbjct: 121 LPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIV 180
Query: 181 NSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDAYQERLHEISDVLSSLEKQVQVSQLKL 240
NSS LQSMNKEHDDMK+TLDGGFKLISD LKKDAYQERLHEISDVLS+LEKQVQ SQLKL
Sbjct: 181 NSSLLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQERLHEISDVLSALEKQVQASQLKL 240
Query: 241 KNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKD 300
+NDFISTFTQEMKA+VCTLK PLQKFP R I+SPE
Sbjct: 241 RNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPE------------------------- 300
Query: 301 LIANVRVLPVWMFHRKSDIDVKCMHFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCT 360
+ L V R+ +C QSASP+VCIRATAVQ EEVGRWKSVKVGKTFCT
Sbjct: 301 ---STASLDVPQQKRR-----RCK--IQSASPDVCIRATAVQTEEVGRWKSVKVGKTFCT 360
Query: 361 SSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGD 412
S+V KK+D KK IPFSEQ LV+EREYRVIVDSDEEIERSFSCLIEEKKTG+
Sbjct: 361 STVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTGE 373
BLAST of CaUC05G080640 vs. TAIR 10
Match:
AT1G01690.1 (putative recombination initiation defects 3 )
HSP 1 Score: 226.1 bits (575), Expect = 5.2e-59
Identity = 159/431 (36.89%), Postives = 242/431 (56.15%), Query Frame = 0
Query: 1 MRLKINKACDLSSISVLPPQSRHARSNALTTGQQAPQLRSQPSQQSFSQGLSSQH---GM 60
M++ INKACDL SISV PP R + Q + QLRSQ SQQSFSQG SS G
Sbjct: 1 MKMNINKACDLKSISVFPPNLRRS-----AEPQASQQLRSQQSQQSFSQGPSSSQRGCGG 60
Query: 61 YSQLSQNSFDEVVTNEQRFSSQDRENSIKK-NSFFTPLSYSREDCQMALSKSSTSLTQRW 120
+SQ++Q+S DE++ N+QRFSSQ+R+ S+KK +S P+++ RED Q+ S+SS+ L++RW
Sbjct: 61 FSQMTQSSIDELLINDQRFSSQERDLSLKKVSSCLPPINHKREDSQLVASRSSSGLSRRW 120
Query: 121 KSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQ 180
S + +SK Q+ EEL++R G +E SL++FG +LDS+ SDI+Q N+G K+V L+ E I Q
Sbjct: 121 SSASIGESKSQISEELEQRFGMMETSLSRFGMMLDSIQSDIMQANRGTKEVFLETERIQQ 180
Query: 181 KMLVNSSSLQSMNKEHDDMKATLDGGFKLISDLLKKDAYQERLHEISDVLSSLEKQVQVS 240
K+ + +SLQ + KE D KA+LDGG K I + KD QE+L +I +L+++ +QV+ +
Sbjct: 181 KLTLQDTSLQQLRKEQADSKASLDGGVKFILEEFSKDPNQEKLQKILQMLTTIPEQVETA 240
Query: 241 QLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCV 300
K++ + TFT+E++ ++ +L+ P + R +P+V+ +L +
Sbjct: 241 LQKIQREICHTFTREIQ-VLASLRTPEPRV--RVPTAPQVKAKENLPEQRGQAAKVLTSL 300
Query: 301 SWKDLIANVRVL------------PVWMFHRKSDIDVKCMHFSQSASPN----VCIRATA 360
+ V PV + + +K +PN ++
Sbjct: 301 KMPEPRVQVPAAPQAKENFPEQRGPVAKSNSFCNTTLKTKQPQFPRNPNDASARAVKPYL 360
Query: 361 VQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEE-IERS 411
K +VG WK+VK K S KK +K + SE + V++DSDEE I+
Sbjct: 361 SPKIQVGCWKTVKPEK-----SNFKKRATRKPVK-SESTRTQFEQCSVVIDSDEEDIDGG 417
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038882642.1 | 1.6e-174 | 83.45 | putative recombination initiation defects 3 isoform X2 [Benincasa hispida] | [more] |
XP_038882627.1 | 3.8e-173 | 83.25 | putative recombination initiation defects 3 isoform X1 [Benincasa hispida] >XP_0... | [more] |
XP_008438048.1 | 7.0e-167 | 80.73 | PREDICTED: protein PAIR1 isoform X3 [Cucumis melo] | [more] |
KAG6597127.1 | 7.8e-166 | 79.37 | putative recombination initiation defects 3, partial [Cucurbita argyrosperma sub... | [more] |
XP_023526420.1 | 1.3e-165 | 79.81 | protein PAIR1-like isoform X2 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
Q0WWX5 | 7.3e-58 | 36.89 | Putative recombination initiation defects 3 OS=Arabidopsis thaliana OX=3702 GN=P... | [more] |
Q75RY2 | 6.0e-28 | 33.66 | Protein PAIR1 OS=Oryza sativa subsp. japonica OX=39947 GN=PAIR1 PE=1 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3AVJ5 | 3.4e-167 | 80.73 | protein PAIR1 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483272 PE=4 SV=1 | [more] |
A0A1S3AV35 | 8.4e-166 | 80.54 | protein PAIR1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483272 PE=4 SV=1 | [more] |
A0A1S4DSK1 | 1.1e-165 | 80.34 | protein PAIR1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483272 PE=4 SV=1 | [more] |
A0A6J1FY69 | 1.9e-165 | 79.08 | protein PAIR1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448385 PE=4 SV=1 | [more] |
A0A6J1FTV4 | 3.2e-165 | 79.08 | protein PAIR1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448385 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT1G01690.1 | 5.2e-59 | 36.89 | putative recombination initiation defects 3 | [more] |