CaUC05G079530 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGCATATCATTCACTCTCGTAACACCTGGTTTAGGAATAAAGCCTTGTAGTGACCAAACTGAATCTTAAGCAGCATGTTAAATGATGATGCTGAATATTCTCCTCCAGCATCCATGGCAGAGGCTTTTGCCATGAGAAAGAAGAGCATGAACAGAAGAAGGTTCAGCGAAGAACAGATCAAATCACTGGAGTCAATTTTCGAGTCTGAGTCAAGGCTTGAGCCCAGAAAGAAGTTGCAGCTGGCGGGAGAGCTGGGTTTGCATCCACGCCAGGTTGCAATATGGTTTCAGAACAAGAGAGCTAGATGGAAGTCAAAGCAGCTTGAACGAGACTACAGTGTTTTACGAGCTAATTACAACACTCTAGCCTCCCGGTTTGAAGCTCTTAAGAAGGAAAAGCAAGCTTTGACTATACAGGTATTTGTTCTTTGTTTCTCTAGGAAAAGACCGGCTGTTGCTTTTTGCTAATCATTGTTATTTCTTTCATTTGGGCAGTTGGAGAAGCTAAATAATCTGGTGCAGAGGTCCATGGAGGAAACTGAGAGCTGCAGGGGAGGTCTCTCCGCAGAAACCATTGATGGCAAATCTGAAAATGGCCACAGAACTAAGTATGAGTCTGAAGTAAAGCCTTGTGCGTCAGTTGAGGAGAAATCAGAACATGAATTAGAGGTTCTTTCCAACTATGGTAGTGGCATAAAGGAAGCCTATCTTGGATTAGAGGATCCCCAGCCCAGGGAACCTGCTCAAGGCTCCTTGATATCGACACCAAATTGGAGCAATTTAGACTCTGAAGGCCTTTTCAGTCAGTCCAATACCAATGGCCAGTGGTGGGACTTCTGGTCGTGAAAAGTAAAACCACCCAGAGAAACTATTAGGGGAATTGTAAACAAATAAAATTCCAACCTTTTAAATAGATCATCCCAGCAATGATTTTGGCTCACAGGACGAGGAACAGTTAAGAGCATAACGACTTCTATCAAGGATAGCAATGAACTGAAATTTGGTTCTTTCAAGCACTGATGCTCCAAATTCACCACAATTTCAGATGGAATTCAGAGAAAAAAAAAAAACAAGAAAAAAACAAAAAATTCGGTGAGCAACTCTAGGAAATACCACCTGCAAAGAGTGTTGCCTTGGAAAACTGAAACAATATGCTCATATGCAGACAGGGGTGCAGTCTGGAGTGTTTTCAGTGTGTGAGAGTTCTTCTTCTTCTGTTTTTTCCCCTTTTTCTGTTTGGTTGGTTGGGGGTAGGGATGGGGGGCGACTATGAAACTCTATATTCATATGCTCAGTTATGAACTAGAACTAGTGCTCATTTTATACGAAGAGAATCTCAGTTTTTTCGTGCTTCTTTTGATTAGGGTCATCTAACAAAAGATTCAATCCGTCCCATAACAAACCAGAGGAATAATGTCAGTGAAATCTAGAATTTGAATGGTCCAATTTGATATCATGGAGATTATTCCTCTGCTGAAAATAGCTAGAAGATGTCCATCTTTCTTATTGCAGGTTCTCCCATAGATATATTAATCCTGTAAGACAACCTAAATATCATCTAATGTAACCAATAAAACGTAACCAGTAATAGCAAGTCAATGTAACTCATATTCGGCCACCTAAGAACTAAAAGGCTTAAGTAGCTAAAAAATAACCAAACATTTTTCATAAACTAAGGTGGATAACTTTACCCTTCCTATCTCATTTTATCTTGTCCCCTCTCAATCACTTTCATTATTTCTTAATATTAAAGCACGTTGTCATCTTACATACTCTTTTATGTACACTTACAAACGGAACGTAAGTATGAGAAAACACAAACCATTTTAGAGACCCTCCCTCAAACTGTGAGATTCCATTTTGACTAACTGTCGCAAAATCCTAGTTAGCGAAGGCTTGTGAATGCGAATCAGCAAATGATTGATTTGCATAAGGAATATAGGACGTGGAACTCCAACTTTACATCATGAATTTAAGATTTTGTTTTATATGAACAAAATGCAAAAATTACCCTTGTACTTGATCATTTCGCCAGTACACACTTCATCTATTTTCTGAATTTTCCTGACCTCATATTTAATGACCTGTCCAACTTCATCCTTCTATCTACATTAACTGTTATTTATGAGCAGACATCATTTGCCC TGCATATCATTCACTCTCGTAACACCTGGTTTAGGAATAAAGCCTTGTAGTGACCAAACTGAATCTTAAGCAGCATGTTAAATGATGATGCTGAATATTCTCCTCCAGCATCCATGGCAGAGGCTTTTGCCATGAGAAAGAAGAGCATGAACAGAAGAAGGTTCAGCGAAGAACAGATCAAATCACTGGAGTCAATTTTCGAGTCTGAGTCAAGGCTTGAGCCCAGAAAGAAGTTGCAGCTGGCGGGAGAGCTGGGTTTGCATCCACGCCAGGTTGCAATATGGTTTCAGAACAAGAGAGCTAGATGGAAGTCAAAGCAGCTTGAACGAGACTACAGTGTTTTACGAGCTAATTACAACACTCTAGCCTCCCGGTTTGAAGCTCTTAAGAAGGAAAAGCAAGCTTTGACTATACAGTTGGAGAAGCTAAATAATCTGGTGCAGAGGTCCATGGAGGAAACTGAGAGCTGCAGGGGAGGTCTCTCCGCAGAAACCATTGATGGCAAATCTGAAAATGGCCACAGAACTAAGTATGAGTCTGAAGTAAAGCCTTGTGCGTCAGTTGAGGAGAAATCAGAACATGAATTAGAGGTTCTTTCCAACTATGGTAGTGGCATAAAGGAAGCCTATCTTGGATTAGAGGATCCCCAGCCCAGGGAACCTGCTCAAGGCTCCTTGATATCGACACCAAATTGGAGCAATTTAGACTCTGAAGGCCTTTTCAGTCAGTCCAATACCAATGGCCAGTGGTGGGACTTCTGGTCGTGAAAAGTAAAACCACCCAGAGAAACTATTAGGGGAATTGTAAACAAATAAAATTCCAACCTTTTAAATAGATCATCCCAGCAATGATTTTGGCTCACAGGACGAGGAACAGTTAAGAGCATAACGACTTCTATCAAGGATAGCAATGAACTGAAATTTGGTTCTTTCAAGCACTGATGCTCCAAATTCACCACAATTTCAGATGGAATTCAGAGAAAAAAAAAAAACAAGAAAAAAACAAAAAATTCGGTGAGCAACTCTAGGAAATACCACCTGCAAAGAGTGTTGCCTTGGAAAACTGAAACAATATGCTCATATGCAGACAGGGGTGCAGTCTGGAGTGTTTTCAGTGTGTGAGAGTTCTTCTTCTTCTGTTTTTTCCCCTTTTTCTGTTTGGTTGGTTGGGGGTAGGGATGGGGGGCGACTATGAAACTCTATATTCATATGCTCAGTTATGAACTAGAACTAGTGCTCATTTTATACGAAGAGAATCTCAGTTTTTTCGTGCTTCTTTTGATTAGGGTCATCTAACAAAAGATTCAATCCGTCCCATAACAAACCAGAGGAATAATGTCAGTGAAATCTAGAATTTGAATGGTCCAATTTGATATCATGGAGATTATTCCTCTGCTGAAAATAGCTAGAAGATGTCCATCTTTCTTATTGCAGGTTCTCCCATAGATATATTAATCCTGTAAGACAACCTAAATATCATCTAATGTAACCAATAAAACGTAACCAGTAATAGCAAGTCAATGTAACTCATATTCGGCCACCTAAGAACTAAAAGGCTTAAGTAGCTAAAAAATAACCAAACATTTTTCATAAACTAAGGTGGATAACTTTACCCTTCCTATCTCATTTTATCTTGTCCCCTCTCAATCACTTTCATTATTTCTTAATATTAAAGCACGTTGTCATCTTACATACTCTTTTATGTACACTTACAAACGGAACGTAAGTATGAGAAAACACAAACCATTTTAGAGACCCTCCCTCAAACTGTGAGATTCCATTTTGACTAACTGTCGCAAAATCCTAGTTAGCGAAGGCTTGTGAATGCGAATCAGCAAATGATTGATTTGCATAAGGAATATAGGACGTGGAACTCCAACTTTACATCATGAATTTAAGATTTTGTTTTATATGAACAAAATGCAAAAATTACCCTTGTACTTGATCATTTCGCCAGTACACACTTCATCTATTTTCTGAATTTTCCTGACCTCATATTTAATGACCTGTCCAACTTCATCCTTCTATCTACATTAACTGTTATTTATGAGCAGACATCATTTGCCC ATGTTAAATGATGATGCTGAATATTCTCCTCCAGCATCCATGGCAGAGGCTTTTGCCATGAGAAAGAAGAGCATGAACAGAAGAAGGTTCAGCGAAGAACAGATCAAATCACTGGAGTCAATTTTCGAGTCTGAGTCAAGGCTTGAGCCCAGAAAGAAGTTGCAGCTGGCGGGAGAGCTGGGTTTGCATCCACGCCAGGTTGCAATATGGTTTCAGAACAAGAGAGCTAGATGGAAGTCAAAGCAGCTTGAACGAGACTACAGTGTTTTACGAGCTAATTACAACACTCTAGCCTCCCGGTTTGAAGCTCTTAAGAAGGAAAAGCAAGCTTTGACTATACAGTTGGAGAAGCTAAATAATCTGGTGCAGAGGTCCATGGAGGAAACTGAGAGCTGCAGGGGAGGTCTCTCCGCAGAAACCATTGATGGCAAATCTGAAAATGGCCACAGAACTAAGTATGAGTCTGAAGTAAAGCCTTGTGCGTCAGTTGAGGAGAAATCAGAACATGAATTAGAGGTTCTTTCCAACTATGGTAGTGGCATAAAGGAAGCCTATCTTGGATTAGAGGATCCCCAGCCCAGGGAACCTGCTCAAGGCTCCTTGATATCGACACCAAATTGGAGCAATTTAGACTCTGAAGGCCTTTTCAGTCAGTCCAATACCAATGGCCAGTGGTGGGACTTCTGGTCGTGA MLNDDAEYSPPASMAEAFAMRKKSMNRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLASRFEALKKEKQALTIQLEKLNNLVQRSMEETESCRGGLSAETIDGKSENGHRTKYESEVKPCASVEEKSEHELEVLSNYGSGIKEAYLGLEDPQPREPAQGSLISTPNWSNLDSEGLFSQSNTNGQWWDFWS Homology
BLAST of CaUC05G079530 vs. NCBI nr
Match: XP_038874805.1 (homeobox-leucine zipper protein ATHB-7 [Benincasa hispida]) HSP 1 Score: 435.6 bits (1119), Expect = 2.6e-118 Identity = 222/230 (96.52%), Postives = 223/230 (96.96%), Query Frame = 0
BLAST of CaUC05G079530 vs. NCBI nr
Match: XP_004133792.1 (homeobox-leucine zipper protein ATHB-12 [Cucumis sativus] >KGN56390.1 hypothetical protein Csa_010007 [Cucumis sativus]) HSP 1 Score: 423.7 bits (1088), Expect = 1.0e-114 Identity = 216/230 (93.91%), Postives = 222/230 (96.52%), Query Frame = 0
BLAST of CaUC05G079530 vs. NCBI nr
Match: XP_022924402.1 (homeobox-leucine zipper protein ATHB-7 [Cucurbita moschata] >KAG6582693.1 Homeobox-leucine zipper protein ATHB-7, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 421.8 bits (1083), Expect = 3.8e-114 Identity = 216/231 (93.51%), Postives = 221/231 (95.67%), Query Frame = 0
BLAST of CaUC05G079530 vs. NCBI nr
Match: XP_023527384.1 (homeobox-leucine zipper protein ATHB-12 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 420.2 bits (1079), Expect = 1.1e-113 Identity = 215/231 (93.07%), Postives = 220/231 (95.24%), Query Frame = 0
BLAST of CaUC05G079530 vs. NCBI nr
Match: XP_022979311.1 (homeobox-leucine zipper protein ATHB-7 [Cucurbita maxima]) HSP 1 Score: 419.9 bits (1078), Expect = 1.5e-113 Identity = 215/231 (93.07%), Postives = 220/231 (95.24%), Query Frame = 0
BLAST of CaUC05G079530 vs. ExPASy Swiss-Prot
Match: P46897 (Homeobox-leucine zipper protein ATHB-7 OS=Arabidopsis thaliana OX=3702 GN=ATHB-7 PE=1 SV=2) HSP 1 Score: 182.6 bits (462), Expect = 5.2e-45 Identity = 119/259 (45.95%), Postives = 153/259 (59.07%), Query Frame = 0
BLAST of CaUC05G079530 vs. ExPASy Swiss-Prot
Match: Q9M276 (Homeobox-leucine zipper protein ATHB-12 OS=Arabidopsis thaliana OX=3702 GN=ATHB-12 PE=1 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 5.7e-44 Identity = 112/224 (50.00%), Postives = 140/224 (62.50%), Query Frame = 0
BLAST of CaUC05G079530 vs. ExPASy Swiss-Prot
Match: Q9XH35 (Homeobox-leucine zipper protein HOX6 OS=Oryza sativa subsp. indica OX=39946 GN=HOX6 PE=2 SV=2) HSP 1 Score: 133.3 bits (334), Expect = 3.6e-30 Identity = 68/97 (70.10%), Postives = 83/97 (85.57%), Query Frame = 0
BLAST of CaUC05G079530 vs. ExPASy Swiss-Prot
Match: Q651Z5 (Homeobox-leucine zipper protein HOX6 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX6 PE=2 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 3.6e-30 Identity = 68/97 (70.10%), Postives = 83/97 (85.57%), Query Frame = 0
BLAST of CaUC05G079530 vs. ExPASy Swiss-Prot
Match: Q01IK0 (Homeobox-leucine zipper protein HOX22 OS=Oryza sativa subsp. indica OX=39946 GN=HOX22 PE=2 SV=2) HSP 1 Score: 125.2 bits (313), Expect = 9.8e-28 Identity = 69/123 (56.10%), Postives = 89/123 (72.36%), Query Frame = 0
BLAST of CaUC05G079530 vs. ExPASy TrEMBL
Match: A0A0A0L317 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G119240 PE=4 SV=1) HSP 1 Score: 423.7 bits (1088), Expect = 4.9e-115 Identity = 216/230 (93.91%), Postives = 222/230 (96.52%), Query Frame = 0
BLAST of CaUC05G079530 vs. ExPASy TrEMBL
Match: A0A6J1E8U3 (homeobox-leucine zipper protein ATHB-7 OS=Cucurbita moschata OX=3662 GN=LOC111431912 PE=4 SV=1) HSP 1 Score: 421.8 bits (1083), Expect = 1.9e-114 Identity = 216/231 (93.51%), Postives = 221/231 (95.67%), Query Frame = 0
BLAST of CaUC05G079530 vs. ExPASy TrEMBL
Match: A0A6J1IQF4 (homeobox-leucine zipper protein ATHB-7 OS=Cucurbita maxima OX=3661 GN=LOC111479074 PE=4 SV=1) HSP 1 Score: 419.9 bits (1078), Expect = 7.1e-114 Identity = 215/231 (93.07%), Postives = 220/231 (95.24%), Query Frame = 0
BLAST of CaUC05G079530 vs. ExPASy TrEMBL
Match: A0A6J1D0R4 (homeobox-leucine zipper protein ATHB-12 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016235 PE=4 SV=1) HSP 1 Score: 401.4 bits (1030), Expect = 2.6e-108 Identity = 208/233 (89.27%), Postives = 217/233 (93.13%), Query Frame = 0
BLAST of CaUC05G079530 vs. ExPASy TrEMBL
Match: A0A5A7U0W8 (Homeobox-leucine zipper protein ATHB-7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00710 PE=4 SV=1) HSP 1 Score: 394.4 bits (1012), Expect = 3.2e-106 Identity = 206/230 (89.57%), Postives = 215/230 (93.48%), Query Frame = 0
BLAST of CaUC05G079530 vs. TAIR 10
Match: AT2G46680.1 (homeobox 7 ) HSP 1 Score: 182.6 bits (462), Expect = 3.7e-46 Identity = 119/259 (45.95%), Postives = 153/259 (59.07%), Query Frame = 0
BLAST of CaUC05G079530 vs. TAIR 10
Match: AT3G61890.1 (homeobox 12 ) HSP 1 Score: 179.1 bits (453), Expect = 4.0e-45 Identity = 112/224 (50.00%), Postives = 140/224 (62.50%), Query Frame = 0
BLAST of CaUC05G079530 vs. TAIR 10
Match: AT2G46680.2 (homeobox 7 ) HSP 1 Score: 176.4 bits (446), Expect = 2.6e-44 Identity = 119/259 (45.95%), Postives = 151/259 (58.30%), Query Frame = 0
BLAST of CaUC05G079530 vs. TAIR 10
Match: AT2G22430.1 (homeobox protein 6 ) HSP 1 Score: 105.5 bits (262), Expect = 5.7e-23 Identity = 69/200 (34.50%), Postives = 109/200 (54.50%), Query Frame = 0
BLAST of CaUC05G079530 vs. TAIR 10
Match: AT5G65310.1 (homeobox protein 5 ) HSP 1 Score: 104.4 bits (259), Expect = 1.3e-22 Identity = 58/138 (42.03%), Postives = 87/138 (63.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|