CaUC04G078380 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC04G078380
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	BTB/POZ and TAZ domain-containing protein 1-like
Location	Ciama_Chr04: 27718855 .. 27719754 (+)
RNA-Seq Expression	CaUC04G078380
Synteny	CaUC04G078380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACATGTAATTGAATTGATTGGGTAAAAGGAATCGATTAAAACAAAAACACCCTTTCCAATTAATTATCGTTGCGGTGGGCTTCTAGAAAAGTCTTCGGCTGTTTTTCAAAGAAAAGAAAAGGAAAAAGGTCTTCGGTGGATACCTTTTGCAAAAGCTAAATGATGGATCAAAAATTCCCTTTCACATGAGCGTGTTTTAGTCAATATGATGGGGATTGTTGCGGTTGTTGGGGAGACCCAATGTTCCAATGATGATGATTTTGAAGTTCTTTAATCTTAGTTTTTAACTTTGTTGGGTTTGGTTTGACAGGCAATTCAAACAAAAAATGCAGCAAGAGAATAATAATGGAAAAGAGGATGCGAAGTGGAAGCTGCTAGTGAAAAAGGTGTTGTCCGCTAAAACCATTTCTTCAGTTTGTCTTCCCAAAAGGAAGAGAGCAGCAGCAGGGGACGCCATGAGCGCGGACCGCATCAGAAGCTTTAGATTACAATCTGTCGAACAAAATCGATCACGCTTAGAAATTAGAACGTAATGTTGTTTTCAAATTAGAAATTAGGAGGATGAGGGGGAGAGGCTTTCTAAAAATTTTGGTGGTTTCATTTGATTTGTTTTTTATGAGGAGCTTTGAGGTTTCCTTTCCTTTCATCAACTGTTTGTTATTTGTATAGGGACAGGAAGGAATGTGTTGTGGTTTGTAAGAAAATATATATAGATAAGAAAAGAAGATAAAAAACAGAGTTTGTTTTGTTTGCTGTATTTCTAATTTTTCCAATATTTAGGCCTTTGTAGTCTGTCTGCCCAAGAGTGCCTTACAATCCAAAAAAGCTTTCTTTCTAAGCTCTTAAGTTATTCATGGGCAAAAAGTTTGCAAGTTTTTAATTCACCAACAAAGTAT

mRNA sequence

ATGGACATTCTTCGGCTGTTTTTCAAAGAAAAGAAAAGGAAAAAGGTCTTCGGTGGATACCTTTTGCAAAAGCTAAATGATGGATCAAAAATTCCCTTTCACATGAGCGTGCAATTCAAACAAAAAATGCAGCAAGAGAATAATAATGGAAAAGAGGATGCGAAGTGGAAGCTGCTAGTGAAAAAGGTGTTGTCCGCTAAAACCATTTCTTCAGTTTGTCTTCCCAAAAGGAAGAGAGCAGCAGCAGGGGACGCCATGAGCGCGGACCGCATCAGAAGCTTTAGATTACAATCTGTCGAACAAAATCGATCACGCTTAGAAATTAGAACGTAATGTTGTTTTCAAATTAGAAATTAGGAGGATGAGGGGGAGAGGCTTTCTAAAAATTTTGGTGGTTTCATTTGATTTGTTTTTTATGAGGAGCTTTGAGGTTTCCTTTCCTTTCATCAACTGTTTGTTATTTGTATAGGGACAGGAAGGAATGTGTTGTGGTTTGTAAGAAAATATATATAGATAAGAAAAGAAGATAAAAAACAGAGTTTGTTTTGTTTGCTGTATTTCTAATTTTTCCAATATTTAGGCCTTTGTAGTCTGTCTGCCCAAGAGTGCCTTACAATCCAAAAAAGCTTTCTTTCTAAGCTCTTAAGTTATTCATGGGCAAAAAGTTTGCAAGTTTTTAATTCACCAACAAAGTAT

Coding sequence (CDS)

ATGGACATTCTTCGGCTGTTTTTCAAAGAAAAGAAAAGGAAAAAGGTCTTCGGTGGATACCTTTTGCAAAAGCTAAATGATGGATCAAAAATTCCCTTTCACATGAGCGTGCAATTCAAACAAAAAATGCAGCAAGAGAATAATAATGGAAAAGAGGATGCGAAGTGGAAGCTGCTAGTGAAAAAGGTGTTGTCCGCTAAAACCATTTCTTCAGTTTGTCTTCCCAAAAGGAAGAGAGCAGCAGCAGGGGACGCCATGAGCGCGGACCGCATCAGAAGCTTTAGATTACAATCTGTCGAACAAAATCGATCACGCTTAGAAATTAGAACGTAA

Protein sequence

MDILRLFFKEKKRKKVFGGYLLQKLNDGSKIPFHMSVQFKQKMQQENNNGKEDAKWKLLVKKVLSAKTISSVCLPKRKRAAAGDAMSADRIRSFRLQSVEQNRSRLEIRT

Homology

[Close]

BLAST of CaUC04G078380 vs. NCBI nr
Match: XP_038893905.1 (BTB/POZ and TAZ domain-containing protein 1-like [Benincasa hispida])

HSP 1 Score: 107.5 bits (267), Expect = 7.7e-20
Identity = 62/78 (79.49%), Postives = 68/78 (87.18%), Query Frame = 0


Query: 26  NDGSKIPFHMSVQFKQKMQQENNNGKEDAKWKLLVKKVLSAKTISSVCLPKRKRAAAGDA 85
           +D  K+P  +  QFK KMQQE N+GKED KWKLLVKKVLSAKTISS+CLPKRKRAAA DA
Sbjct: 322 SDACKVP--LCRQFKVKMQQE-NDGKEDPKWKLLVKKVLSAKTISSICLPKRKRAAA-DA 381

Query: 86  MSADRIRSFRLQSVEQNR 104
           MSADRIRSFR+QSVEQNR
Sbjct: 382 MSADRIRSFRIQSVEQNR 395

[Close]

BLAST of CaUC04G078380 vs. NCBI nr
Match: XP_004137576.1 (BTB/POZ and TAZ domain-containing protein 1 [Cucumis sativus] >KGN63975.1 hypothetical protein Csa_013343 [Cucumis sativus])

HSP 1 Score: 90.5 bits (223), Expect = 9.7e-15
Identity = 55/73 (75.34%), Postives = 60/73 (82.19%), Query Frame = 0


Query: 26  NDGSKIPFHMSVQFKQKMQQENNNGKEDAKWKLLVKKVLSAKTISSVCLPKRKRAAAGDA 85
           +D  K+P  +  QFKQKM+QEN   KEDAKWKLLVKKVLSAKTISSVCLPKRKRA   DA
Sbjct: 294 SDACKVP--LCRQFKQKMKQENVE-KEDAKWKLLVKKVLSAKTISSVCLPKRKRAVR-DA 353

Query: 86  MSADRIRSFRLQS 99
           MSAD I+SFRLQS
Sbjct: 354 MSADCIKSFRLQS 362

[Close]

BLAST of CaUC04G078380 vs. NCBI nr
Match: KAG7020035.1 (BTB/POZ and TAZ domain-containing protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 90.5 bits (223), Expect = 9.7e-15
Identity = 55/82 (67.07%), Postives = 64/82 (78.05%), Query Frame = 0


Query: 26  NDGSKIPFHMSVQFKQKMQQENNNGKEDAKWKLLVKKVLSAKTISSVCLPKRKR-AAAGD 85
           +D  K+P  +  QFK KM+QE  +GKED+KWK+LVKKV+SAKTISS+ LPKRKR AAAGD
Sbjct: 290 SDACKVP--LCRQFKLKMEQE-KDGKEDSKWKMLVKKVVSAKTISSLSLPKRKRAAAAGD 349

Query: 86  AMSADRIRSFRLQSVEQNRSRL 107
             S DRIRSFRLQ VE N S L
Sbjct: 350 TTSGDRIRSFRLQCVEPNGSVL 368

[Close]

BLAST of CaUC04G078380 vs. NCBI nr
Match: XP_022924010.1 (BTB/POZ and TAZ domain-containing protein 1-like [Cucurbita moschata])

HSP 1 Score: 90.5 bits (223), Expect = 9.7e-15
Identity = 55/82 (67.07%), Postives = 64/82 (78.05%), Query Frame = 0


Query: 26  NDGSKIPFHMSVQFKQKMQQENNNGKEDAKWKLLVKKVLSAKTISSVCLPKRKR-AAAGD 85
           +D  K+P  +  QFK KM+QE  +GKED+KWK+LVKKV+SAKTISS+ LPKRKR AAAGD
Sbjct: 290 SDACKVP--LCRQFKLKMEQE-KDGKEDSKWKMLVKKVVSAKTISSLSLPKRKRAAAAGD 349

Query: 86  AMSADRIRSFRLQSVEQNRSRL 107
             S DRIRSFRLQ VE N S L
Sbjct: 350 TTSGDRIRSFRLQCVEPNGSVL 368

[Close]

BLAST of CaUC04G078380 vs. NCBI nr
Match: XP_008439713.1 (PREDICTED: BTB/POZ and TAZ domain-containing protein 1-like [Cucumis melo] >KAA0036064.1 BTB/POZ and TAZ domain-containing protein 1-like [Cucumis melo var. makuwa] >TYJ98871.1 BTB/POZ and TAZ domain-containing protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 90.5 bits (223), Expect = 9.7e-15
Identity = 55/73 (75.34%), Postives = 60/73 (82.19%), Query Frame = 0


Query: 26  NDGSKIPFHMSVQFKQKMQQENNNGKEDAKWKLLVKKVLSAKTISSVCLPKRKRAAAGDA 85
           +D  K+P  +  QFKQKM+QEN   KEDAKWKLLVKKVLSAKTISSVCLPKRKRA   DA
Sbjct: 294 SDACKVP--LCRQFKQKMKQENIE-KEDAKWKLLVKKVLSAKTISSVCLPKRKRAVR-DA 353

Query: 86  MSADRIRSFRLQS 99
           MSAD I+SFRLQS
Sbjct: 354 MSADCIKSFRLQS 362

[Close]

BLAST of CaUC04G078380 vs. ExPASy TrEMBL
Match: A0A5A7SXK0 (BTB/POZ and TAZ domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00670 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 4.7e-15
Identity = 55/73 (75.34%), Postives = 60/73 (82.19%), Query Frame = 0


Query: 26  NDGSKIPFHMSVQFKQKMQQENNNGKEDAKWKLLVKKVLSAKTISSVCLPKRKRAAAGDA 85
           +D  K+P  +  QFKQKM+QEN   KEDAKWKLLVKKVLSAKTISSVCLPKRKRA   DA
Sbjct: 294 SDACKVP--LCRQFKQKMKQENIE-KEDAKWKLLVKKVLSAKTISSVCLPKRKRAVR-DA 353

Query: 86  MSADRIRSFRLQS 99
           MSAD I+SFRLQS
Sbjct: 354 MSADCIKSFRLQS 362

[Close]

BLAST of CaUC04G078380 vs. ExPASy TrEMBL
Match: A0A0A0LPZ8 (Protein binding protein OS=Cucumis sativus OX=3659 GN=Csa_1G032450 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 4.7e-15
Identity = 55/73 (75.34%), Postives = 60/73 (82.19%), Query Frame = 0


Query: 26  NDGSKIPFHMSVQFKQKMQQENNNGKEDAKWKLLVKKVLSAKTISSVCLPKRKRAAAGDA 85
           +D  K+P  +  QFKQKM+QEN   KEDAKWKLLVKKVLSAKTISSVCLPKRKRA   DA
Sbjct: 294 SDACKVP--LCRQFKQKMKQENVE-KEDAKWKLLVKKVLSAKTISSVCLPKRKRAVR-DA 353

Query: 86  MSADRIRSFRLQS 99
           MSAD I+SFRLQS
Sbjct: 354 MSADCIKSFRLQS 362

[Close]

BLAST of CaUC04G078380 vs. ExPASy TrEMBL
Match: A0A6J1EDK7 (BTB/POZ and TAZ domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111431558 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 4.7e-15
Identity = 55/82 (67.07%), Postives = 64/82 (78.05%), Query Frame = 0


Query: 26  NDGSKIPFHMSVQFKQKMQQENNNGKEDAKWKLLVKKVLSAKTISSVCLPKRKR-AAAGD 85
           +D  K+P  +  QFK KM+QE  +GKED+KWK+LVKKV+SAKTISS+ LPKRKR AAAGD
Sbjct: 290 SDACKVP--LCRQFKLKMEQE-KDGKEDSKWKMLVKKVVSAKTISSLSLPKRKRAAAAGD 349

Query: 86  AMSADRIRSFRLQSVEQNRSRL 107
             S DRIRSFRLQ VE N S L
Sbjct: 350 TTSGDRIRSFRLQCVEPNGSVL 368

[Close]

BLAST of CaUC04G078380 vs. ExPASy TrEMBL
Match: A0A1S3AZ02 (BTB/POZ and TAZ domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103484398 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 4.7e-15
Identity = 55/73 (75.34%), Postives = 60/73 (82.19%), Query Frame = 0


Query: 26  NDGSKIPFHMSVQFKQKMQQENNNGKEDAKWKLLVKKVLSAKTISSVCLPKRKRAAAGDA 85
           +D  K+P  +  QFKQKM+QEN   KEDAKWKLLVKKVLSAKTISSVCLPKRKRA   DA
Sbjct: 294 SDACKVP--LCRQFKQKMKQENIE-KEDAKWKLLVKKVLSAKTISSVCLPKRKRAVR-DA 353

Query: 86  MSADRIRSFRLQS 99
           MSAD I+SFRLQS
Sbjct: 354 MSADCIKSFRLQS 362

[Close]

BLAST of CaUC04G078380 vs. ExPASy TrEMBL
Match: A0A6J1KHZ2 (BTB/POZ and TAZ domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111495406 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 8.0e-15
Identity = 52/81 (64.20%), Postives = 63/81 (77.78%), Query Frame = 0


Query: 26  NDGSKIPFHMSVQFKQKMQQENNNGKEDAKWKLLVKKVLSAKTISSVCLPKRKRAAAGDA 85
           +D  ++P  +  QFK KM+QE  +GKED+KWK+LVKKV+SAKTISS+ LP+RKRAAA D 
Sbjct: 290 SDACRVP--LCRQFKLKMEQE-KDGKEDSKWKMLVKKVVSAKTISSLSLPRRKRAAAEDT 349

Query: 86  MSADRIRSFRLQSVEQNRSRL 107
            S DRIRSFRLQ VE N S L
Sbjct: 350 TSGDRIRSFRLQCVEPNGSVL 367

[Close]

BLAST of CaUC04G078380 vs. TAIR 10
Match: AT3G48360.1 (BTB and TAZ domain protein 2 )

HSP 1 Score: 40.8 bits (94), Expect = 8.2e-04
Identity = 21/53 (39.62%), Postives = 36/53 (67.92%), Query Frame = 0


Query: 27  DGSKIPFHMSVQFKQKMQQENNNGKEDAKWKLLVKKVLSAKTISSVCLPKRKR 80
           D  ++P  +  QF+++ +Q+   G ED KWKLLV +V+SAK ++S+C  K+ +
Sbjct: 308 DSCRVP--LCRQFRKRGEQDKKMG-EDTKWKLLVTRVVSAKAMTSLCQSKKNK 357

The following BLAST results are available for this feature:

BLAST of CaUC04G078380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893905.1	7.7e-20	79.49	BTB/POZ and TAZ domain-containing protein 1-like [Benincasa hispida]	[more]
XP_004137576.1	9.7e-15	75.34	BTB/POZ and TAZ domain-containing protein 1 [Cucumis sativus] >KGN63975.1 hypoth...	[more]
KAG7020035.1	9.7e-15	67.07	BTB/POZ and TAZ domain-containing protein 1, partial [Cucurbita argyrosperma sub...	[more]
XP_022924010.1	9.7e-15	67.07	BTB/POZ and TAZ domain-containing protein 1-like [Cucurbita moschata]	[more]
XP_008439713.1	9.7e-15	75.34	PREDICTED: BTB/POZ and TAZ domain-containing protein 1-like [Cucumis melo] >KAA0...	[more]

BLAST of CaUC04G078380 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC04G078380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SXK0	4.7e-15	75.34	BTB/POZ and TAZ domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=...	[more]
A0A0A0LPZ8	4.7e-15	75.34	Protein binding protein OS=Cucumis sativus OX=3659 GN=Csa_1G032450 PE=4 SV=1	[more]
A0A6J1EDK7	4.7e-15	67.07	BTB/POZ and TAZ domain-containing protein 1-like OS=Cucurbita moschata OX=3662 G...	[more]
A0A1S3AZ02	4.7e-15	75.34	BTB/POZ and TAZ domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1KHZ2	8.0e-15	64.20	BTB/POZ and TAZ domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=...	[more]

BLAST of CaUC04G078380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G48360.1	8.2e-04	39.62	BTB and TAZ domain protein 2	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC04G078380.1	CaUC04G078380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009725	response to hormone
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009751	response to salicylic acid
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005516	calmodulin binding
molecular_function	GO:0046872	metal ion binding