CaUC04G078050 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC04G078050
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	Ciama_Chr04: 27465570 .. 27470138 (+)
RNA-Seq Expression	CaUC04G078050
Synteny	CaUC04G078050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATTTGTTGGGATATTGGTAATGGGATTTTTGTGTTTGTGCTCTTTGGTTCATGGCTATGGTGGACGCTGGATCAATGACGCTCATGCTACTTTCTATGGCGGCCCCGATGCTTCTGGTACTTTGGGTACGTAAACTAACTAATTAAACTCTCACTTCTTTTCCTTTATTAAAGATGCTGTTTCGATATTGTGTTTTATATATTCGTTAACTTTAGAAGTATAAAAACATGGTTTTCAACGTTTAAAATTAAAAGTTTCAACTCTATTTGATAATGATACTGTTTGGTTTTTTCTATCATGCTTGTATTATCTCACATTTTCTATTATGTTTTCATCTCTATGACTTGAATTTTCTAAATATCTCCTAGAATGTAGATAACAAAAAGAAAAATCTATAATTGAAAGTAGGGTTGGTTAATTTCCAAGACAAAATAATCATTGAATATAAGTTAATGAAATTTTTATTGAATGTTTTTAAAATGCAAAATTTTATTAAACACAATTTTGAATATTAATTCATGTTTTATCTTTTTTTTTTTATCTCTCTTAAACTTTCTATCTTATCACGATATTACATTTTTTTATCGACATATCAATATTTTTATTGATATTTTTCACATTTTTTTAGAGTAGACATCAACATAAGAAGCAAATCGTGATTTTTGTCATATCGTAAAAAATTCATGAACATGGAAAAATAAGTAATAAAATGTCACTAATGTAAATATGATATAAGTGACAAACAATTTAACACTTATTTAAATAGGCGGTGTATAATATTTATTTTTTTTTAAAAAAATGGTGTAAAATAATTATTTACTATTATACATTTTTTGAACTTTTTATTTTAATTATAATTTTAGTTAATTATGACATTTTCGTAAAATTTGAGACCTCAATTATTTTGATTGTGGAGATGGGTATTTTAAAGGTGGATGTTGATTGTGATTTTAATGGAATATTTGTGCAGGTGGGGCTTGTGGTTATGGGAATGTATATAGCGCGGACTATGGGATTAAAACGACGGCGTTGAGTCCAGCATTGTTCGACAATGGGTTGAGTTGTGGGGCTTGTTTTGAGGTTAGGTGTGTGAATAACCAAAAATGCCTTCCCGGCTCCGTCGTGGTCACCGCCACCAACTTCTGTCCTCCCGGCGGTTGGTGCGCCCCTTCCCTCCACCATTTTGATCTCTCTCAACCTGCCTTCCAAACCATCGCTCAATCCATCGCCGGGGTCGTCCCCGTTGCTTATCGAAGGTACGCCCTTTGTTAAGAATATGAATGAAAGATCGCTTACAATCATTCTAACCTTTAAAAAAAAAAGTCTTAGAATTATCGAATACAAAATTAATAGTTTAATCAGATTGGTTTGATCATCCTTTGATTTTTTAAAATTAAAATATTGAATTTTTTAACTTGTTATCTACTCAATAGAGGTGTTTTAAGAAACCAAATCAAAATTTGAAAACTAAAAAAATTAGTTTTTAAAAACTTGTTTTTGTTTTTGAATTTGCTTAATAATTCAACTACTTATTTAGTAAACATGAAACCACGGTAAAGAAGTCATAAAAAAACAAAATCATTTTCAGAAACTAAATGATTACTAAATTGAGTCTTAGTTACAATAAACTAAATGGTTACCAAACCGACTTTTGGTTTTTTTATTTTTTTGAAAATTAAGTTCATAAATTCTACTTCCATCGTTTCCATTTGTCATCTGACATTCTAACTTGTACAATTGTTTTAAAGAATCAAGCCAATTTATAAGAAAACTAAAAACAAAAAGCTGTTTTTAAAATTTGGCTAATAATTCAAACAAAATTATAACAAAAAATTTCAAAAACCAAATGATTTTACCGAAAACCAGCCTTAGTTTTTATCTTTTATTTTTGAAAATTGTGTTAATTTATCAAAATTCAGCTATAAATTCAAACGTTGACTTAAAAATATAAAAATTATTGTAAAGAAATGGTAAGCAAACAAGCATAATTATTAAAAAAAAAGAAAAAATTATATAGTCATAAAAATAAGGTTGTAAAAACTAAGTTAAATTACAAGTTTAGTCTTGAAAGTTGAGATTTGTGTTTATTTATTTTCGAATAGAACTTTTAAAATTTTAGATCATATATATGTGTTAATATAAAACCCTAAACTTTAAAAAATATCCAATATTAGATTCTTTGACTTTCAATTTTATGAGCAGCTAATAAATCATAATTTAAATTTTACATCTAATGAAACCTAACATGATTGTAGGGTTAAATGTGCAAGAAAGGGAGGAATAAAGTTCAGAATCGAAGGGAATCCAAACTTCAATTTGGTGCTAATAAGCAATGTGGGAGGCGCTGGAGACGTTCATGCAGTTTACATCAAAGGGGGAAGGAATGGTTGGAAGGCAATGGTTAGAAATTGGGGTCAAAATTGGCAAAGCAATGATAATCTTGTAGGACAGTCCCTTTCTTTTAAGGTCATTACTGGTGATGGTCACTCACTTGTGTCTTACAATGTTGCCCCTTCTAGTTGGTCATTTGGACAAACCTTTGTTGGTAGACAGTTCCCTTAAAACACTTTCTAAATCATATCATCATGGATTTCATAGTTTAATTATCACATGTTAATTCTAATGTATTGGACTTTTTAAATTATTGATACGGTACGTATCTAGGTTTAGGATCGTAATATCCATTTACTCCAATCTCAATAGAAAAAAGTTATGTTTGAATGTTTGGACTTTAATTAGAGTTACTATTCTAAAATGTTTATCATTCAATCATTACCTAAATGGTAATGTAGCATGATGATTGATCAACTAAGATCATGTTTACTAGTCCATAATCAAAATTGTTGCATTGTAATGAATTTTTTTCATTATTCATAATTCATAAAATATTGTTAATTAGTTTTTCTGGAAAAATATTTAAATGGGTCTCATTTTTTATATTACCATTGATTGATTATGTTTACTGGGAAGTAAATGTAGTCTAAGTGATGATTTAGTAAACTAATACAAAAGTAAGGCAACCAAATAAAATAAGATCACCAAGCAAGAAATTTTGGTGGGCTAAGGCAAGTGAAATTTTGTTTTAAACTATTTTATTAAAAATTTCACTAGGCGTTATTTCATCGAGGTGGTTTAACTCTATTCATGCTTCATTTTATCATGTCATGTCAAACGATTATGATGAGACTTTGTAATGTAATAGTGATTTAATTTAACAAGACTCAAAATATCTACATCTAAAATAATATGTTAGCATGGTTAGCCATCCATTATATCCCACGTGGTAAAATATTTCCCATTTTGTAGGAAGAATCAAGTTTCTATCATGGGCTAAAAGTTGGCCTACACTATCTTTCTTCAACCAACTGAAACAAAGATTTAGATTTAAGGATATGGCAATGGACCCTAAGATAAAAGGATAAGGCTCTTTTGTTCCTATTGGTTCATCCAAAACTTCATAAAACTCATCTTAACCATCTGATCCTAAAGTATCATATTTTCTAACCCTTGATATCCATCAAACAAATCAACACCATAAATCTTAAATGCCATTACAAAGCCATGAACAAAATACACTTCTTGAACTCAAACCAAAGCCAGGTTTTCTTCTACCATCATTCTTGCTCAAAAAATGGTAACTGTCACGACCCAGGCTTCGGCCGTTGTCTTCCAGCCATGCACGTCAAGATCGAGGTTTCTCTCGGGGTCTTCGGGAAAGTTTAACAGAGCTTTGTCTGTTAAGCCAACAACTTCTTTAGTTCTTAATTCTTTCAAAGTTGAGGCCAAGAAAGGAGAGTGGTTGCCAGGTTTGCCATCCCCAGCTTACCTTGATGGAAGGTATAAATTATTTCAAACATATGTAAGACATGTGGAAATAGAGATGTGAAATAAAACAATCAACTTAAACATTTCTGTATGCAGTCTGCCAGGTGACAATGGGTTTGATCCTCTGGGACTTGCAGAGGATCCTGAAAACTTGAGGTGGTATGTGCAAGCCGAGCTCGTGAATGGCCGATGGGCGATGCTCGGAGTTGCAGGTATGGTATTGCCTGAAGTCTTCACAAATTTCGGAATCATCAATGTACCGAAATGGTACGATGCAGGGAAAGCTGAGTATTTCGCATCGTCATCGACTCTCTTTGTGATTGAGTTCATTCTGTTCCATTATGTGGAAATCAGAAGATGGCAAGATATAAAGAACCCAGGAAGTGTAAACCAAGATCCCATTTTCAAGCAATACAGCTTGCCACCAAACGATGTTGGATATCCAGGGGGAATTTTCAACCCACTCAACTTTGAGCCAACTCTCGAGGCCAAGGAGAAGGAGATTGCTAATGGTAAATGTCTCAGAAACAAAACTAGCTAATCAAATTCCTCAATTATTACATGTACAATAATGTAGCTGATCAAGTTTTGATGATGTTCTACAGGAAGACTGGCAATGTTGGCATTCTTGGGATTCATCGTTCAACACAATGTGACTGGAAAAGGTCCATTTGACAACTTCTTGCAGCACATTTCAGACCCGTGGCACAACACTATAGTTCAAACACTAAGGGGGTAG

mRNA sequence

ATGGGATTTGTTGGGATATTGGTAATGGGATTTTTGTGTTTGTGCTCTTTGGTTCATGGCTATGGTGGACGCTGGATCAATGACGCTCATGCTACTTTCTATGGCGGCCCCGATGCTTCTGGTACTTTGGGTACCGCGGACTATGGGATTAAAACGACGGCGTTGAGTCCAGCATTGTTCGACAATGGGTTGAGTTGTGGGGCTTGTTTTGAGGTTAGGTGTGTGAATAACCAAAAATGCCTTCCCGGCTCCGTCGTGGTCACCGCCACCAACTTCTGTCCTCCCGGCGGTTGGTGCGCCCCTTCCCTCCACCATTTTGATCTCTCTCAACCTGCCTTCCAAACCATCGCTCAATCCATCGCCGGGGTCGTCCCCGTTGCTTATCGAAGGGTTAAATGTGCAAGAAAGGGAGGAATAAAGTTCAGAATCGAAGGGAATCCAAACTTCAATTTGGTGCTAATAAGCAATGTGGGAGGCGCTGGAGACGTTCATGCAGTTTACATCAAAGGGGGAAGGAATGGTTGGAAGGCAATGGTTAGAAATTGGGGTCAAAATTGGCAAAGCAATGATAATCTTGTAGGACAGTCCCTTTCTTTTAAGGCTTCGGCCGTTGTCTTCCAGCCATGCACGTCAAGATCGAGGTTTCTCTCGGGGTCTTCGGGAAAGTTTAACAGAGCTTTGTCTGTTAAGCCAACAACTTCTTTAGTTCTTAATTCTTTCAAAGTTGAGGCCAAGAAAGGAGAGTGGTTGCCAGGTTTGCCATCCCCAGCTTACCTTGATGGAAGTCTGCCAGGTGACAATGGGTTTGATCCTCTGGGACTTGCAGAGGATCCTGAAAACTTGAGGTGGTATGTGCAAGCCGAGCTCGTGAATGGCCGATGGGCGATGCTCGGAGTTGCAGGTATGGTATTGCCTGAAGTCTTCACAAATTTCGGAATCATCAATGTACCGAAATGGTACGATGCAGGGAAAGCTGAGTATTTCGCATCGTCATCGACTCTCTTTGTGATTGAGTTCATTCTGTTCCATTATGTGGAAATCAGAAGATGGCAAGATATAAAGAACCCAGGAAGTGTAAACCAAGATCCCATTTTCAAGCAATACAGCTTGCCACCAAACGATGTTGGATATCCAGGGGGAATTTTCAACCCACTCAACTTTGAGCCAACTCTCGAGGCCAAGGAGAAGGAGATTGCTAATGGAAGACTGGCAATGTTGGCATTCTTGGGATTCATCGTTCAACACAATGTGACTGGAAAAGGTCCATTTGACAACTTCTTGCAGCACATTTCAGACCCGTGGCACAACACTATAGTTCAAACACTAAGGGGGTAG

Coding sequence (CDS)

ATGGGATTTGTTGGGATATTGGTAATGGGATTTTTGTGTTTGTGCTCTTTGGTTCATGGCTATGGTGGACGCTGGATCAATGACGCTCATGCTACTTTCTATGGCGGCCCCGATGCTTCTGGTACTTTGGGTACCGCGGACTATGGGATTAAAACGACGGCGTTGAGTCCAGCATTGTTCGACAATGGGTTGAGTTGTGGGGCTTGTTTTGAGGTTAGGTGTGTGAATAACCAAAAATGCCTTCCCGGCTCCGTCGTGGTCACCGCCACCAACTTCTGTCCTCCCGGCGGTTGGTGCGCCCCTTCCCTCCACCATTTTGATCTCTCTCAACCTGCCTTCCAAACCATCGCTCAATCCATCGCCGGGGTCGTCCCCGTTGCTTATCGAAGGGTTAAATGTGCAAGAAAGGGAGGAATAAAGTTCAGAATCGAAGGGAATCCAAACTTCAATTTGGTGCTAATAAGCAATGTGGGAGGCGCTGGAGACGTTCATGCAGTTTACATCAAAGGGGGAAGGAATGGTTGGAAGGCAATGGTTAGAAATTGGGGTCAAAATTGGCAAAGCAATGATAATCTTGTAGGACAGTCCCTTTCTTTTAAGGCTTCGGCCGTTGTCTTCCAGCCATGCACGTCAAGATCGAGGTTTCTCTCGGGGTCTTCGGGAAAGTTTAACAGAGCTTTGTCTGTTAAGCCAACAACTTCTTTAGTTCTTAATTCTTTCAAAGTTGAGGCCAAGAAAGGAGAGTGGTTGCCAGGTTTGCCATCCCCAGCTTACCTTGATGGAAGTCTGCCAGGTGACAATGGGTTTGATCCTCTGGGACTTGCAGAGGATCCTGAAAACTTGAGGTGGTATGTGCAAGCCGAGCTCGTGAATGGCCGATGGGCGATGCTCGGAGTTGCAGGTATGGTATTGCCTGAAGTCTTCACAAATTTCGGAATCATCAATGTACCGAAATGGTACGATGCAGGGAAAGCTGAGTATTTCGCATCGTCATCGACTCTCTTTGTGATTGAGTTCATTCTGTTCCATTATGTGGAAATCAGAAGATGGCAAGATATAAAGAACCCAGGAAGTGTAAACCAAGATCCCATTTTCAAGCAATACAGCTTGCCACCAAACGATGTTGGATATCCAGGGGGAATTTTCAACCCACTCAACTTTGAGCCAACTCTCGAGGCCAAGGAGAAGGAGATTGCTAATGGAAGACTGGCAATGTTGGCATTCTTGGGATTCATCGTTCAACACAATGTGACTGGAAAAGGTCCATTTGACAACTTCTTGCAGCACATTTCAGACCCGTGGCACAACACTATAGTTCAAACACTAAGGGGGTAG

Protein sequence

MGFVGILVMGFLCLCSLVHGYGGRWINDAHATFYGGPDASGTLGTADYGIKTTALSPALFDNGLSCGACFEVRCVNNQKCLPGSVVVTATNFCPPGGWCAPSLHHFDLSQPAFQTIAQSIAGVVPVAYRRVKCARKGGIKFRIEGNPNFNLVLISNVGGAGDVHAVYIKGGRNGWKAMVRNWGQNWQSNDNLVGQSLSFKASAVVFQPCTSRSRFLSGSSGKFNRALSVKPTTSLVLNSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMVLPEVFTNFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIVQTLRG

Homology

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BLAST of CaUC04G078050 vs. NCBI nr
Match: KAG7037112.1 (Chlorophyll a-b binding protein P4, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 768.8 bits (1984), Expect = 2.5e-218
Identity = 384/499 (76.95%), Postives = 405/499 (81.16%), Query Frame = 0


Query: 4   VGILVMGFL-----CLCSLVHGY-GGRWINDAHATFYGGPDASGTLGTA---------DY 63
           +G++V  FL      LCS VHGY G  W+N AHATFYGGPDA GTLG A         +Y
Sbjct: 1   MGVVVAQFLLVTLFILCSFVHGYRGTNWVNGAHATFYGGPDAYGTLGGACGYGNVYSENY 60

Query: 64  GIKTTALSPALFDNGLSCGACFEVRCVNNQK-CLPGSVVVTATNFCPPGGWCAPSLHHFD 123
           GIKTTALS AL+DNGLSCGACFEV+CVN+ K CLPGSVVVTATNFCPPGGWC PSL HFD
Sbjct: 61  GIKTTALSTALYDNGLSCGACFEVKCVNDPKWCLPGSVVVTATNFCPPGGWCDPSLRHFD 120

Query: 124 LSQPAFQTIAQSIAGVVPVAYRRVKCARKGGIKFRIEGNPNFNLVLISNVGGAGDVHAVY 183
           LSQPAFQ+IAQ+IAGVVPVAYRRV+CAR+GGIKFRI+GNP FNLVL+SNVGGAGDVHAVY
Sbjct: 121 LSQPAFQSIAQTIAGVVPVAYRRVRCARRGGIKFRIDGNPYFNLVLVSNVGGAGDVHAVY 180

Query: 184 IKGGRNGWKAMVRNWGQNWQSNDNLVGQSLSF---------------------------- 243
           IKG R GW+AM+RNWGQNWQSND LVGQSLSF                            
Sbjct: 181 IKGSRTGWRAMIRNWGQNWQSNDYLVGQSLSFRVITGDGRSVVSYNVAPSGWEDISFYHG 240

Query: 244 ----------------------------KASAVVFQPCTSRSRFLSGSSGKFNRALSVKP 303
                                       KASA VF P  SRSRFLSGSSGKFNRALSVKP
Sbjct: 241 LKSGLHHLFFNQLKQRFRFMDMAMDPEIKASAAVFWPSASRSRFLSGSSGKFNRALSVKP 300

Query: 304 TTSLVLNSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVN 363
           TTSLV +SFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVN
Sbjct: 301 TTSLVPSSFKVEAKKGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVN 360

Query: 364 GRWAMLGVAGMVLPEVFTNFGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQ 423
           GRWAMLGVAGM+LPEVFT++GIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQ
Sbjct: 361 GRWAMLGVAGMLLPEVFTSYGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQ 420

Query: 424 DIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGF 431
           DIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGF
Sbjct: 421 DIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGF 480

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BLAST of CaUC04G078050 vs. NCBI nr
Match: GEU87931.1 (chlorophyll a-b binding protein P4, chloroplastic [Tanacetum cinerariifolium])

HSP 1 Score: 632.9 bits (1631), Expect = 2.1e-177
Identity = 320/476 (67.23%), Postives = 358/476 (75.21%), Query Frame = 0


Query: 4   VGILVMGFLCLCSLVHGYGGRWINDAHATFYGGPDASGTLGTA---------DYGIKTTA 63
           +G+LV+G   L S+V G  G W+ DAHATFYGG DASGT+G A          YG  T A
Sbjct: 11  IGLLVVGI--LVSMVKGNNGGWV-DAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAA 70

Query: 64  LSPALFDNGLSCGACFEVRCVNNQK-CLPGSVVVTATNFCPP--------GGWCAPSLHH 123
           LS +LF+NG+SCGACFE++C  + K C PGS+VVTATNFCPP        GGWC P   H
Sbjct: 71  LSTSLFNNGMSCGACFEIKCTGDPKWCHPGSIVVTATNFCPPNNALPNNAGGWCNPPQQH 130

Query: 124 FDLSQPAFQTIAQSIAGVVPVAYRRVKCARKGGIKFRIEGNPNFNLVLISNVGGAGDVHA 183
           FDLSQP FQ IAQ  AG+VPV Y+RV C +KGGI+F + G+  FNLVLI+NVGGAGD+ A
Sbjct: 131 FDLSQPVFQQIAQYRAGIVPVQYKRVPCIKKGGIRFTVNGHSYFNLVLITNVGGAGDITA 190

Query: 184 VYIKGGRNGWKAMVRNWG--QNWQSNDNLVGQ---------------SLSFKASAVVFQP 243
           V IKG     K + R       W +   LV +               +   +AS    +P
Sbjct: 191 VAIKG-----KEVARELHALARWSNGSMLVSERNNTLFRRCRSHSKMATVTQASVPTLRP 250

Query: 244 CTSRSRFLSGSSGKFNRALSVKPTTSLVLNSFKVEAKKGEWLPGLPSPAYLDGSLPGDNG 303
           C SRS FLSGS GK NR L+VKP TS  + SFKVEAKKGEWLPGL SP+YLDGSL GDNG
Sbjct: 251 CASRSAFLSGSFGKLNRTLAVKPATSSSV-SFKVEAKKGEWLPGLASPSYLDGSLAGDNG 310

Query: 304 FDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMVLPEVFTNFGIINVPKWYDAGKAEYF 363
           FDPLGLAEDPE+L+W+VQAEL NGRWAMLGVAGM+LPEV TN GI+NVPKWYDAGK EYF
Sbjct: 311 FDPLGLAEDPESLKWFVQAELQNGRWAMLGVAGMLLPEVLTNSGILNVPKWYDAGKQEYF 370

Query: 364 ASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFE 423
           ASSSTL VIEFILFHYVEIRRWQDIKNPGSVNQDPIFK YSLPPN VGYPGGIFNPLNF 
Sbjct: 371 ASSSTLLVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKSYSLPPNKVGYPGGIFNPLNFA 430

Query: 424 PTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIVQTLRG 445
           PT EAK+KEIANGRLAMLAFLGFIVQHNVTGKGPFDN +QH+SDPWHNTIVQTL G
Sbjct: 431 PTAEAKDKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLMQHLSDPWHNTIVQTLSG 477

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BLAST of CaUC04G078050 vs. NCBI nr
Match: XP_038894825.1 (chlorophyll a-b binding protein P4, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 495.7 bits (1275), Expect = 4.0e-136
Identity = 234/245 (95.51%), Postives = 239/245 (97.55%), Query Frame = 0


Query: 200 KASAVVFQPCTSRSRFLSGSSGKFNRALSVKPTTSLVLNSFKVEAKKGEWLPGLPSPAYL 259
           +ASA VF+PCT RSRFLS +SGKFNR LSVKPTTS V NSFKVEAKKGEWLPGLPSPAYL
Sbjct: 7   QASASVFRPCTLRSRFLSRTSGKFNRGLSVKPTTSSVPNSFKVEAKKGEWLPGLPSPAYL 66

Query: 260 DGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMVLPEVFTNFGIINVPKW 319
           DGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGM+LPEVFT+FGIINVPKW
Sbjct: 67  DGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSFGIINVPKW 126

Query: 320 YDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPG 379
           YDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPG
Sbjct: 127 YDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPG 186

Query: 380 GIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIV 439
           GIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIV
Sbjct: 187 GIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIV 246

Query: 440 QTLRG 445
           QTLRG
Sbjct: 247 QTLRG 251

[Close]

BLAST of CaUC04G078050 vs. NCBI nr
Match: XP_022949090.1 (chlorophyll a-b binding protein P4, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 495.4 bits (1274), Expect = 5.3e-136
Identity = 233/245 (95.10%), Postives = 240/245 (97.96%), Query Frame = 0


Query: 200 KASAVVFQPCTSRSRFLSGSSGKFNRALSVKPTTSLVLNSFKVEAKKGEWLPGLPSPAYL 259
           +ASA VF+P  SRSRFL GSSGKFNRALSVKPTTSLV +SFKVEAKKGEWLPGLPSPAYL
Sbjct: 7   QASAAVFRPSASRSRFLLGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAYL 66

Query: 260 DGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMVLPEVFTNFGIINVPKW 319
           DGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGM+LPEVFT++GIINVPKW
Sbjct: 67  DGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYGIINVPKW 126

Query: 320 YDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPG 379
           YDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPG
Sbjct: 127 YDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPG 186

Query: 380 GIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIV 439
           GIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFI+QHNVTGKGPFDNFLQHISDPWHNTIV
Sbjct: 187 GIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTIV 246

Query: 440 QTLRG 445
           QTLRG
Sbjct: 247 QTLRG 251

[Close]

BLAST of CaUC04G078050 vs. NCBI nr
Match: XP_022998805.1 (chlorophyll a-b binding protein P4, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 495.0 bits (1273), Expect = 6.9e-136
Identity = 233/245 (95.10%), Postives = 240/245 (97.96%), Query Frame = 0


Query: 200 KASAVVFQPCTSRSRFLSGSSGKFNRALSVKPTTSLVLNSFKVEAKKGEWLPGLPSPAYL 259
           +ASA VF+P  SRSRFLSGSSGKFNRALSVKPTTSLV +SFKVEAKKGEWLPGLPSPAYL
Sbjct: 7   QASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAYL 66

Query: 260 DGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMVLPEVFTNFGIINVPKW 319
           DGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGM+LPEVFT+ GIINVPKW
Sbjct: 67  DGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSNGIINVPKW 126

Query: 320 YDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPG 379
           YDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPG
Sbjct: 127 YDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPG 186

Query: 380 GIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIV 439
           GIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFI+QHNVTGKGPFDNFLQHISDPWHNT+V
Sbjct: 187 GIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTVV 246

Query: 440 QTLRG 445
           QTLRG
Sbjct: 247 QTLRG 251

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BLAST of CaUC04G078050 vs. ExPASy Swiss-Prot
Match: Q9SQL2 (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum OX=3888 GN=lhcA-P4 PE=1 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 1.6e-122
Identity = 207/249 (83.13%), Postives = 221/249 (88.76%), Query Frame = 0


Query: 196 SLSFKASAVVFQPCTSRSRFLSGSSGKFNRALSVKPTTSLVLNSFKVEAKKGEWLPGLPS 255
           +++ +ASA +F PC  +SRFL GSSGK NR ++ +P       SFKVEAKKGEWLPGL S
Sbjct: 3   TVTTQASAAIFGPCGLKSRFLGGSSGKLNRGVAFRPVGCSPSASFKVEAKKGEWLPGLAS 62

Query: 256 PAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMVLPEVFTNFGIIN 315
           P YL GSLPGDNGFDPLGLAEDPENLRW+VQAELVNGRWAMLGVAGM+LPEVFT+ GIIN
Sbjct: 63  PGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGIIN 122

Query: 316 VPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDV 375
           VPKWY AGK EYFASSSTLFVIEFIL HYVEIRRWQDIKNPGSVNQDPIFKQYSLP  +V
Sbjct: 123 VPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSLPAGEV 182

Query: 376 GYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWH 435
           GYPGGIFNPLNF PTLEAKEKEIANGRLAMLAFLGFI+QHNVTGKGPFDN LQHISDPWH
Sbjct: 183 GYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQHISDPWH 242

Query: 436 NTIVQTLRG 445
           NTIVQTL G
Sbjct: 243 NTIVQTLGG 251

[Close]

BLAST of CaUC04G078050 vs. ExPASy Swiss-Prot
Match: P27521 (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA4 PE=1 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 4.7e-119
Identity = 201/242 (83.06%), Postives = 218/242 (90.08%), Query Frame = 0


Query: 201 ASAVVFQPCTSRSRFLSGSSGKFNRALSVKPT-TSLVLNSFKVEAKKGEWLPGLPSPAYL 260
           ASA +F+PCTS+ RFL+GSSG+ NR LS     +S   +SFKVEAKKGEWLPGL SP YL
Sbjct: 8   ASASIFRPCTSKPRFLTGSSGRLNRDLSFTSIGSSAKTSSFKVEAKKGEWLPGLASPDYL 67

Query: 261 DGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMVLPEVFTNFGIINVPKW 320
            GSL GDNGFDPLGLAEDPENL+W+VQAELVNGRWAMLGVAGM+LPEVFT  GIINVP+W
Sbjct: 68  TGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPEW 127

Query: 321 YDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPG 380
           YDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP  +VGYPG
Sbjct: 128 YDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPG 187

Query: 381 GIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIV 440
           GIFNPLNF PT EAKEKE+ANGRLAMLAFLGF+VQHNVTGKGPF+N LQH+SDPWHNTIV
Sbjct: 188 GIFNPLNFAPTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDPWHNTIV 247

Query: 441 QT 442
           QT
Sbjct: 248 QT 249

[Close]

BLAST of CaUC04G078050 vs. ExPASy Swiss-Prot
Match: Q36718 (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare OX=4513 GN=LHC Ib-20 PE=1 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 6.8e-86
Identity = 147/200 (73.50%), Postives = 168/200 (84.00%), Query Frame = 0


Query: 246 KGEWLPGLPSPAYLDGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMVLP 305
           KG WLPGL SPAYLDGSL GDNGFDPL LAEDPE+LRW+VQA++VNGRWAMLGVAGM++P
Sbjct: 33  KGSWLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFVQADVVNGRWAMLGVAGMLIP 92

Query: 306 EVFTNFGIINVPKWYD-AGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPI 365
           EV T  G++N P+W    GK  YFASSST   +  +   YVEIRRWQDIKNPGSVNQDPI
Sbjct: 93  EVLTKAGLMNAPEWLRLPGKETYFASSSTALRVH-MSSTYVEIRRWQDIKNPGSVNQDPI 152

Query: 366 FKQYSLPPNDVGYPGGIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFD 425
           FK YSLPP++ GYPG +FNPLNF P LE KEKE+ANGRLAMLAFLGF+VQHNV GKGPF+
Sbjct: 153 FKSYSLPPHECGYPGRVFNPLNFAP-LENKEKELANGRLAMLAFLGFLVQHNVHGKGPFE 212

Query: 426 NFLQHISDPWHNTIVQTLRG 445
           N  QH++DPWHNTI+QT+ G
Sbjct: 213 NLQQHLADPWHNTIIQTISG 230

[Close]

BLAST of CaUC04G078050 vs. ExPASy Swiss-Prot
Match: Q9LDR9 (Expansin-A10 OS=Arabidopsis thaliana OX=3702 GN=EXPA10 PE=2 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 2.8e-71
Identity = 140/221 (63.35%), Postives = 160/221 (72.40%), Query Frame = 0


Query: 1   MGFVGILVMGFL-CLCSLVHGYGGRWINDAHATFYGGPDASGTLGTA---------DYGI 60
           MG +G LVM  +  + S V GYGG WIN AHATFYGG DASGT+G A          YG 
Sbjct: 1   MGHLGFLVMIMVGVMASSVSGYGGGWIN-AHATFYGGGDASGTMGGACGYGNLYSQGYGT 60

Query: 61  KTTALSPALFDNGLSCGACFEVRCVNNQK-CLPGSVVVTATNFCPP--------GGWCAP 120
            T ALS ALF+NGLSCG+CFE+RC N+ K CLPGS+VVTATNFCPP        GGWC P
Sbjct: 61  STAALSTALFNNGLSCGSCFEIRCENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNP 120

Query: 121 SLHHFDLSQPAFQTIAQSIAGVVPVAYRRVKCARKGGIKFRIEGNPNFNLVLISNVGGAG 180
            L HFDL+QP FQ IAQ  AG+VPV+YRRV C R+GGI+F I G+  FNLVLI+NVGGAG
Sbjct: 121 PLEHFDLAQPVFQRIAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAG 180

Query: 181 DVHAVYIKGGRNGWKAMVRNWGQNWQSNDNLVGQSLSFKAS 203
           DVH+  IKG R  W+AM RNWGQNWQSN  L GQ+LSFK +
Sbjct: 181 DVHSAAIKGSRTVWQAMSRNWGQNWQSNSYLNGQALSFKVT 220

[Close]

BLAST of CaUC04G078050 vs. ExPASy Swiss-Prot
Match: O80622 (Expansin-A15 OS=Arabidopsis thaliana OX=3702 GN=EXPA15 PE=2 SV=2)

HSP 1 Score: 270.4 bits (690), Expect = 3.6e-71
Identity = 134/221 (60.63%), Postives = 159/221 (71.95%), Query Frame = 0


Query: 1   MGFVGILVMGFLCLCSLVHGYGGRWINDAHATFYGGPDASGTLGTA---------DYGIK 60
           MG +GI +  F  +   VHGY   W+N AHATFYGG DASGT+G A          YG  
Sbjct: 6   MGLLGIALFCFAAMVCSVHGYDAGWVN-AHATFYGGSDASGTMGGACGYGNLYSQGYGTN 65

Query: 61  TTALSPALFDNGLSCGACFEVRCVNNQK-CLPGSVVVTATNFCPP--------GGWCAPS 120
           T ALS ALF+NGLSCGACFE++C ++   CLPG+++VTATNFCPP        GGWC P 
Sbjct: 66  TAALSTALFNNGLSCGACFEIKCQSDGAWCLPGAIIVTATNFCPPNNALPNNAGGWCNPP 125

Query: 121 LHHFDLSQPAFQTIAQSIAGVVPVAYRRVKCARKGGIKFRIEGNPNFNLVLISNVGGAGD 180
           LHHFDLSQP FQ IAQ  AGVVPV+YRRV C R+GGI+F I G+  FNLVL++NVGGAGD
Sbjct: 126 LHHFDLSQPVFQRIAQYKAGVVPVSYRRVPCMRRGGIRFTINGHSYFNLVLVTNVGGAGD 185

Query: 181 VHAVYIKGGRNGWKAMVRNWGQNWQSNDNLVGQSLSFKASA 204
           VH+V +KG R  W+ M RNWGQNWQSN+ L GQ+LSFK +A
Sbjct: 186 VHSVAVKGSRTRWQQMSRNWGQNWQSNNLLNGQALSFKVTA 225

[Close]

BLAST of CaUC04G078050 vs. ExPASy TrEMBL
Match: A0A6L2NNJ5 (Chlorophyll a-b binding protein, chloroplastic OS=Tanacetum cinerariifolium OX=118510 GN=Tci_059909 PE=3 SV=1)

HSP 1 Score: 632.9 bits (1631), Expect = 1.0e-177
Identity = 320/476 (67.23%), Postives = 358/476 (75.21%), Query Frame = 0


Query: 4   VGILVMGFLCLCSLVHGYGGRWINDAHATFYGGPDASGTLGTA---------DYGIKTTA 63
           +G+LV+G   L S+V G  G W+ DAHATFYGG DASGT+G A          YG  T A
Sbjct: 11  IGLLVVGI--LVSMVKGNNGGWV-DAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAA 70

Query: 64  LSPALFDNGLSCGACFEVRCVNNQK-CLPGSVVVTATNFCPP--------GGWCAPSLHH 123
           LS +LF+NG+SCGACFE++C  + K C PGS+VVTATNFCPP        GGWC P   H
Sbjct: 71  LSTSLFNNGMSCGACFEIKCTGDPKWCHPGSIVVTATNFCPPNNALPNNAGGWCNPPQQH 130

Query: 124 FDLSQPAFQTIAQSIAGVVPVAYRRVKCARKGGIKFRIEGNPNFNLVLISNVGGAGDVHA 183
           FDLSQP FQ IAQ  AG+VPV Y+RV C +KGGI+F + G+  FNLVLI+NVGGAGD+ A
Sbjct: 131 FDLSQPVFQQIAQYRAGIVPVQYKRVPCIKKGGIRFTVNGHSYFNLVLITNVGGAGDITA 190

Query: 184 VYIKGGRNGWKAMVRNWG--QNWQSNDNLVGQ---------------SLSFKASAVVFQP 243
           V IKG     K + R       W +   LV +               +   +AS    +P
Sbjct: 191 VAIKG-----KEVARELHALARWSNGSMLVSERNNTLFRRCRSHSKMATVTQASVPTLRP 250

Query: 244 CTSRSRFLSGSSGKFNRALSVKPTTSLVLNSFKVEAKKGEWLPGLPSPAYLDGSLPGDNG 303
           C SRS FLSGS GK NR L+VKP TS  + SFKVEAKKGEWLPGL SP+YLDGSL GDNG
Sbjct: 251 CASRSAFLSGSFGKLNRTLAVKPATSSSV-SFKVEAKKGEWLPGLASPSYLDGSLAGDNG 310

Query: 304 FDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMVLPEVFTNFGIINVPKWYDAGKAEYF 363
           FDPLGLAEDPE+L+W+VQAEL NGRWAMLGVAGM+LPEV TN GI+NVPKWYDAGK EYF
Sbjct: 311 FDPLGLAEDPESLKWFVQAELQNGRWAMLGVAGMLLPEVLTNSGILNVPKWYDAGKQEYF 370

Query: 364 ASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPGGIFNPLNFE 423
           ASSSTL VIEFILFHYVEIRRWQDIKNPGSVNQDPIFK YSLPPN VGYPGGIFNPLNF 
Sbjct: 371 ASSSTLLVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKSYSLPPNKVGYPGGIFNPLNFA 430

Query: 424 PTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIVQTLRG 445
           PT EAK+KEIANGRLAMLAFLGFIVQHNVTGKGPFDN +QH+SDPWHNTIVQTL G
Sbjct: 431 PTAEAKDKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLMQHLSDPWHNTIVQTLSG 477

[Close]

BLAST of CaUC04G078050 vs. ExPASy TrEMBL
Match: A0A6J1GBT1 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111452545 PE=3 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 2.6e-136
Identity = 233/245 (95.10%), Postives = 240/245 (97.96%), Query Frame = 0


Query: 200 KASAVVFQPCTSRSRFLSGSSGKFNRALSVKPTTSLVLNSFKVEAKKGEWLPGLPSPAYL 259
           +ASA VF+P  SRSRFL GSSGKFNRALSVKPTTSLV +SFKVEAKKGEWLPGLPSPAYL
Sbjct: 7   QASAAVFRPSASRSRFLLGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAYL 66

Query: 260 DGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMVLPEVFTNFGIINVPKW 319
           DGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGM+LPEVFT++GIINVPKW
Sbjct: 67  DGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSYGIINVPKW 126

Query: 320 YDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPG 379
           YDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPG
Sbjct: 127 YDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPG 186

Query: 380 GIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIV 439
           GIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFI+QHNVTGKGPFDNFLQHISDPWHNTIV
Sbjct: 187 GIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTIV 246

Query: 440 QTLRG 445
           QTLRG
Sbjct: 247 QTLRG 251

[Close]

BLAST of CaUC04G078050 vs. ExPASy TrEMBL
Match: A0A6J1KDI3 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493358 PE=3 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 3.3e-136
Identity = 233/245 (95.10%), Postives = 240/245 (97.96%), Query Frame = 0


Query: 200 KASAVVFQPCTSRSRFLSGSSGKFNRALSVKPTTSLVLNSFKVEAKKGEWLPGLPSPAYL 259
           +ASA VF+P  SRSRFLSGSSGKFNRALSVKPTTSLV +SFKVEAKKGEWLPGLPSPAYL
Sbjct: 7   QASAAVFRPSASRSRFLSGSSGKFNRALSVKPTTSLVPSSFKVEAKKGEWLPGLPSPAYL 66

Query: 260 DGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMVLPEVFTNFGIINVPKW 319
           DGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGM+LPEVFT+ GIINVPKW
Sbjct: 67  DGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSNGIINVPKW 126

Query: 320 YDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPG 379
           YDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPG
Sbjct: 127 YDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPG 186

Query: 380 GIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIV 439
           GIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFI+QHNVTGKGPFDNFLQHISDPWHNT+V
Sbjct: 187 GIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNFLQHISDPWHNTVV 246

Query: 440 QTLRG 445
           QTLRG
Sbjct: 247 QTLRG 251

[Close]

BLAST of CaUC04G078050 vs. ExPASy TrEMBL
Match: A0A0A0LTE5 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_1G033310 PE=3 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 9.7e-136
Identity = 230/244 (94.26%), Postives = 237/244 (97.13%), Query Frame = 0


Query: 200 KASAVVFQPCTSRSRFLSGSSGKFNRALSVKPTTSLVLNSFKVEAKKGEWLPGLPSPAYL 259
           +ASA VF+PC SRSRFLSGSSGKFNRALSVKPTTS + N+FKVEAKKGEWLPGLPSP YL
Sbjct: 7   QASATVFRPCASRSRFLSGSSGKFNRALSVKPTTSSIPNAFKVEAKKGEWLPGLPSPTYL 66

Query: 260 DGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMVLPEVFTNFGIINVPKW 319
           DGSLPGDNGFDPLGLAEDPENLRWY QAELVNGRWAMLGVAGMVLPEV TN+GIINVPKW
Sbjct: 67  DGSLPGDNGFDPLGLAEDPENLRWYTQAELVNGRWAMLGVAGMVLPEVLTNYGIINVPKW 126

Query: 320 YDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPG 379
           YDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPG
Sbjct: 127 YDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPG 186

Query: 380 GIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIV 439
           GIFNPLNFEPTLEA+EKEIANGRLAMLAFLGFIVQHNVTGKGPFDNF+QHISDPWHNTIV
Sbjct: 187 GIFNPLNFEPTLEAREKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFMQHISDPWHNTIV 246

Query: 440 QTLR 444
           QTLR
Sbjct: 247 QTLR 250

[Close]

BLAST of CaUC04G078050 vs. ExPASy TrEMBL
Match: A0A6J1C5V9 (Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111008702 PE=3 SV=1)

HSP 1 Score: 485.7 bits (1249), Expect = 2.0e-133
Identity = 229/245 (93.47%), Postives = 235/245 (95.92%), Query Frame = 0


Query: 200 KASAVVFQPCTSRSRFLSGSSGKFNRALSVKPTTSLVLNSFKVEAKKGEWLPGLPSPAYL 259
           +ASA VF+PC SRSRFLSGSSGKFNRALSVKPT S +   FKVEAKKGEWLPGLPSPAYL
Sbjct: 7   QASAAVFRPCASRSRFLSGSSGKFNRALSVKPTASSLPCYFKVEAKKGEWLPGLPSPAYL 66

Query: 260 DGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMVLPEVFTNFGIINVPKW 319
           DGSL GDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGM+LPEVFT+ GIINVPKW
Sbjct: 67  DGSLAGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTSIGIINVPKW 126

Query: 320 YDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPG 379
           YDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFK YSLPPNDVGYPG
Sbjct: 127 YDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKXYSLPPNDVGYPG 186

Query: 380 GIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIV 439
           GIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTI+
Sbjct: 187 GIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTII 246

Query: 440 QTLRG 445
           QTLRG
Sbjct: 247 QTLRG 251

[Close]

BLAST of CaUC04G078050 vs. TAIR 10
Match: AT3G47470.1 (light-harvesting chlorophyll-protein complex I subunit A4 )

HSP 1 Score: 429.5 bits (1103), Expect = 3.3e-120
Identity = 201/242 (83.06%), Postives = 218/242 (90.08%), Query Frame = 0


Query: 201 ASAVVFQPCTSRSRFLSGSSGKFNRALSVKPT-TSLVLNSFKVEAKKGEWLPGLPSPAYL 260
           ASA +F+PCTS+ RFL+GSSG+ NR LS     +S   +SFKVEAKKGEWLPGL SP YL
Sbjct: 8   ASASIFRPCTSKPRFLTGSSGRLNRDLSFTSIGSSAKTSSFKVEAKKGEWLPGLASPDYL 67

Query: 261 DGSLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMVLPEVFTNFGIINVPKW 320
            GSL GDNGFDPLGLAEDPENL+W+VQAELVNGRWAMLGVAGM+LPEVFT  GIINVP+W
Sbjct: 68  TGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPEW 127

Query: 321 YDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNDVGYPG 380
           YDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP  +VGYPG
Sbjct: 128 YDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPG 187

Query: 381 GIFNPLNFEPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNFLQHISDPWHNTIV 440
           GIFNPLNF PT EAKEKE+ANGRLAMLAFLGF+VQHNVTGKGPF+N LQH+SDPWHNTIV
Sbjct: 188 GIFNPLNFAPTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDPWHNTIV 247

Query: 441 QT 442
           QT
Sbjct: 248 QT 249

[Close]

BLAST of CaUC04G078050 vs. TAIR 10
Match: AT1G26770.1 (expansin A10 )

HSP 1 Score: 270.8 bits (691), Expect = 2.0e-72
Identity = 140/221 (63.35%), Postives = 160/221 (72.40%), Query Frame = 0


Query: 1   MGFVGILVMGFL-CLCSLVHGYGGRWINDAHATFYGGPDASGTLGTA---------DYGI 60
           MG +G LVM  +  + S V GYGG WIN AHATFYGG DASGT+G A          YG 
Sbjct: 1   MGHLGFLVMIMVGVMASSVSGYGGGWIN-AHATFYGGGDASGTMGGACGYGNLYSQGYGT 60

Query: 61  KTTALSPALFDNGLSCGACFEVRCVNNQK-CLPGSVVVTATNFCPP--------GGWCAP 120
            T ALS ALF+NGLSCG+CFE+RC N+ K CLPGS+VVTATNFCPP        GGWC P
Sbjct: 61  STAALSTALFNNGLSCGSCFEIRCENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNP 120

Query: 121 SLHHFDLSQPAFQTIAQSIAGVVPVAYRRVKCARKGGIKFRIEGNPNFNLVLISNVGGAG 180
            L HFDL+QP FQ IAQ  AG+VPV+YRRV C R+GGI+F I G+  FNLVLI+NVGGAG
Sbjct: 121 PLEHFDLAQPVFQRIAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAG 180

Query: 181 DVHAVYIKGGRNGWKAMVRNWGQNWQSNDNLVGQSLSFKAS 203
           DVH+  IKG R  W+AM RNWGQNWQSN  L GQ+LSFK +
Sbjct: 181 DVHSAAIKGSRTVWQAMSRNWGQNWQSNSYLNGQALSFKVT 220

[Close]

BLAST of CaUC04G078050 vs. TAIR 10
Match: AT1G26770.2 (expansin A10 )

HSP 1 Score: 270.8 bits (691), Expect = 2.0e-72
Identity = 140/221 (63.35%), Postives = 160/221 (72.40%), Query Frame = 0


Query: 1   MGFVGILVMGFL-CLCSLVHGYGGRWINDAHATFYGGPDASGTLGTA---------DYGI 60
           MG +G LVM  +  + S V GYGG WIN AHATFYGG DASGT+G A          YG 
Sbjct: 11  MGHLGFLVMIMVGVMASSVSGYGGGWIN-AHATFYGGGDASGTMGGACGYGNLYSQGYGT 70

Query: 61  KTTALSPALFDNGLSCGACFEVRCVNNQK-CLPGSVVVTATNFCPP--------GGWCAP 120
            T ALS ALF+NGLSCG+CFE+RC N+ K CLPGS+VVTATNFCPP        GGWC P
Sbjct: 71  STAALSTALFNNGLSCGSCFEIRCENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNP 130

Query: 121 SLHHFDLSQPAFQTIAQSIAGVVPVAYRRVKCARKGGIKFRIEGNPNFNLVLISNVGGAG 180
            L HFDL+QP FQ IAQ  AG+VPV+YRRV C R+GGI+F I G+  FNLVLI+NVGGAG
Sbjct: 131 PLEHFDLAQPVFQRIAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAG 190

Query: 181 DVHAVYIKGGRNGWKAMVRNWGQNWQSNDNLVGQSLSFKAS 203
           DVH+  IKG R  W+AM RNWGQNWQSN  L GQ+LSFK +
Sbjct: 191 DVHSAAIKGSRTVWQAMSRNWGQNWQSNSYLNGQALSFKVT 230

[Close]

BLAST of CaUC04G078050 vs. TAIR 10
Match: AT2G03090.1 (expansin A15 )

HSP 1 Score: 270.4 bits (690), Expect = 2.6e-72
Identity = 134/221 (60.63%), Postives = 159/221 (71.95%), Query Frame = 0


Query: 1   MGFVGILVMGFLCLCSLVHGYGGRWINDAHATFYGGPDASGTLGTA---------DYGIK 60
           MG +GI +  F  +   VHGY   W+N AHATFYGG DASGT+G A          YG  
Sbjct: 6   MGLLGIALFCFAAMVCSVHGYDAGWVN-AHATFYGGSDASGTMGGACGYGNLYSQGYGTN 65

Query: 61  TTALSPALFDNGLSCGACFEVRCVNNQK-CLPGSVVVTATNFCPP--------GGWCAPS 120
           T ALS ALF+NGLSCGACFE++C ++   CLPG+++VTATNFCPP        GGWC P 
Sbjct: 66  TAALSTALFNNGLSCGACFEIKCQSDGAWCLPGAIIVTATNFCPPNNALPNNAGGWCNPP 125

Query: 121 LHHFDLSQPAFQTIAQSIAGVVPVAYRRVKCARKGGIKFRIEGNPNFNLVLISNVGGAGD 180
           LHHFDLSQP FQ IAQ  AGVVPV+YRRV C R+GGI+F I G+  FNLVL++NVGGAGD
Sbjct: 126 LHHFDLSQPVFQRIAQYKAGVVPVSYRRVPCMRRGGIRFTINGHSYFNLVLVTNVGGAGD 185

Query: 181 VHAVYIKGGRNGWKAMVRNWGQNWQSNDNLVGQSLSFKASA 204
           VH+V +KG R  W+ M RNWGQNWQSN+ L GQ+LSFK +A
Sbjct: 186 VHSVAVKGSRTRWQQMSRNWGQNWQSNNLLNGQALSFKVTA 225

[Close]

BLAST of CaUC04G078050 vs. TAIR 10
Match: AT1G69530.3 (expansin A1 )

HSP 1 Score: 269.2 bits (687), Expect = 5.7e-72
Identity = 148/258 (57.36%), Postives = 174/258 (67.44%), Query Frame = 0


Query: 3   FVGILVMGFLCLCSLVHGY-GGRWINDAHATFYGGPDASGTLGTA---------DYGIKT 62
           F+ I  +G   + S V+GY GG W+N AHATFYGG DASGT+G A          YG  T
Sbjct: 6   FLFIATLG--AMTSHVNGYAGGGWVN-AHATFYGGGDASGTMGGACGYGNLYSQGYGTNT 65

Query: 63  TALSPALFDNGLSCGACFEVRCVNNQK-CLPGSVVVTATNFCPP--------GGWCAPSL 122
            ALS ALF+NGLSCGACFE+RC N+ K CLPGS+VVTATNFCPP        GGWC P  
Sbjct: 66  AALSTALFNNGLSCGACFEIRCQNDGKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPQ 125

Query: 123 HHFDLSQPAFQTIAQSIAGVVPVAYRRVKCARKGGIKFRIEGNPNFNLVLISNVGGAGDV 182
            HFDLSQP FQ IAQ  AG+VPVAYRRV C R+GGI+F I G+  FNLVLI+NVGGAGDV
Sbjct: 126 QHFDLSQPVFQRIAQYRAGIVPVAYRRVPCVRRGGIRFTINGHSYFNLVLITNVGGAGDV 185

Query: 183 HAVYIKGGRNGWKAMVRNWGQNWQSNDNLVGQSLSFKASAVVFQPCTSRSRFLSG-SSGK 241
           H+  +KG R GW+AM RNWGQNWQSN  L GQSLSFK +    Q   S +   +G S G+
Sbjct: 186 HSAMVKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFKVTTSDGQTIVSNNVANAGWSFGQ 245

The following BLAST results are available for this feature:

BLAST of CaUC04G078050 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7037112.1	2.5e-218	76.95	Chlorophyll a-b binding protein P4, chloroplastic, partial [Cucurbita argyrosper...	[more]
GEU87931.1	2.1e-177	67.23	chlorophyll a-b binding protein P4, chloroplastic [Tanacetum cinerariifolium]	[more]
XP_038894825.1	4.0e-136	95.51	chlorophyll a-b binding protein P4, chloroplastic-like [Benincasa hispida]	[more]
XP_022949090.1	5.3e-136	95.10	chlorophyll a-b binding protein P4, chloroplastic-like [Cucurbita moschata]	[more]
XP_022998805.1	6.9e-136	95.10	chlorophyll a-b binding protein P4, chloroplastic-like [Cucurbita maxima]	[more]

BLAST of CaUC04G078050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SQL2	1.6e-122	83.13	Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum OX=3888 GN=lh...	[more]
P27521	4.7e-119	83.06	Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
Q36718	6.8e-86	73.50	Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulga...	[more]
Q9LDR9	2.8e-71	63.35	Expansin-A10 OS=Arabidopsis thaliana OX=3702 GN=EXPA10 PE=2 SV=1	[more]
O80622	3.6e-71	60.63	Expansin-A15 OS=Arabidopsis thaliana OX=3702 GN=EXPA15 PE=2 SV=2	[more]

BLAST of CaUC04G078050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6L2NNJ5	1.0e-177	67.23	Chlorophyll a-b binding protein, chloroplastic OS=Tanacetum cinerariifolium OX=1...	[more]
A0A6J1GBT1	2.6e-136	95.10	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1KDI3	3.3e-136	95.10	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A0A0LTE5	9.7e-136	94.26	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A6J1C5V9	2.0e-133	93.47	Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN...	[more]

BLAST of CaUC04G078050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47470.1	3.3e-120	83.06	light-harvesting chlorophyll-protein complex I subunit A4	[more]
AT1G26770.1	2.0e-72	63.35	expansin A10	[more]
AT1G26770.2	2.0e-72	63.35	expansin A10	[more]
AT2G03090.1	2.6e-72	60.63	expansin A15	[more]
AT1G69530.3	5.7e-72	57.36	expansin A1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007118	Expansin/Lol pI	PRINTS	PR01225	EXPANSNFAMLY	coord: 121..137 score: 57.06 coord: 34..52 score: 31.45 coord: 175..189 score: 65.33 coord: 56..74 score: 61.45
IPR002963	Expansin	PRINTS	PR01226	EXPANSIN	coord: 96..113 score: 65.56 coord: 47..61 score: 57.78 coord: 85..95 score: 78.79 coord: 137..149 score: 50.51 coord: 184..205 score: 57.88 coord: 149..170 score: 70.0 coord: 113..126 score: 54.29
IPR007112	Expansin/pollen allergen, DPBB domain	SMART	SM00837	dpbb_1	coord: 52..128 e-value: 1.7E-38 score: 143.9
IPR007112	Expansin/pollen allergen, DPBB domain	PROSITE	PS50842	EXPANSIN_EG45	coord: 35..138 score: 25.386972
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 256..435 e-value: 6.9E-67 score: 227.0
IPR007117	Expansin, cellulose-binding-like domain	PFAM	PF01357	Expansin_C	coord: 139..201 e-value: 5.7E-20 score: 71.1
IPR007117	Expansin, cellulose-binding-like domain	PROSITE	PS50843	EXPANSIN_CBD	coord: 148..242 score: 13.875817
IPR036908	RlpA-like domain superfamily	GENE3D	2.40.40.10		coord: 16..134 e-value: 3.4E-33 score: 116.6
IPR036908	RlpA-like domain superfamily	SUPERFAMILY	50685	Barwin-like endoglucanases	coord: 25..156
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 256..415 e-value: 6.3E-49 score: 166.6
IPR036749	Expansin, cellulose-binding-like domain superfamily	GENE3D	2.60.40.760		coord: 136..211 e-value: 2.5E-12 score: 48.5
IPR036749	Expansin, cellulose-binding-like domain superfamily	SUPERFAMILY	49590	PHL pollen allergen	coord: 135..201
IPR009009	RlpA-like protein, double-psi beta-barrel domain	PFAM	PF03330	DPBB_1	coord: 52..128 e-value: 9.1E-21 score: 74.0
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 198..444
None	No IPR available	PANTHER	PTHR21649:SF109	CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC	coord: 198..444
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 246..442

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC04G078050.1	CaUC04G078050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0009664	plant-type cell wall organization
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009409	response to cold
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0009645	response to low light intensity stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0019904	protein domain specific binding