CaUC04G077980 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTGTAAAGTGAATGAGAAAATGAGATAGAGTGATGGAGCTTCTTTTGTTTGGGCCTTCTGTAATGGATATGGACATTTAGGGCACCAAAAAAGCAAAGATCTTGAAGAGGAATTTTGGATTTGGAGTGGGGTTACTCCTCTAATTTAGTGCTATTGTAATGGATAGACTCCACCAAAAGCCCCCAATTGGAACTTCAAATTTTCAGGAGTTTCTTCCTCTTCTGTTTGTTGCATGAACAGTGCAGCCCAAAGCCTTGAAATTTCTCCTCCATTTCTCATTTGCTTCAATTCTCCATGTCGAAACAGTAATTGGGTCGGCGTGTTAATGGCGGATGATGAATCCAGATCGATTTTCGACTGTGAAAACTTCCCTCTACAGCGGAAAATCGAATCCAAAGAATGGTCGATGGTGGTGATTAGGGATTCTCTTCCCGATGATGATTTCTCCGTTTTCCCACCTTCAAAACACGAGAATCTTCAACCCCCATCCATTGAAGAAGACGAACGAGGAAGCCCGGTTTCATTTCAATCCAATTCGCCATCATCGTTGTTTAGTTCGTCCCAATCATCTTCATCCTTCTCGTCGTTCTCATTTTCTGATGACGAGATTTCACACCCACACTCACCCAAGCCATCTGATTGTCAAATTCGAAAATCTATGACGGCTTCTAGGTGGCTGCTTTTTGGGGTTCAGATTCTACGCTCACGGATTACTGCAATGGCGCGTAGAACGGCTTTTTGGTTGTTTTCCCCTGCAGGAAGGATTGCGTTATTGATGACTCTTTTGTGGCTGTACAAGAGAGCTCGTAAGCGCCGTTTGCGTCAAAGCACCGAGGAATTAAAGATGATGATCAAGGAGAAAGACGAGGTTTGTCAATTTCTGATCTCCAAGTGTTTGTGAAAATGCTTGTTAGAGTTTGAACACACCCCTGTATTCTGCAAAATGGGTACTAGAGAAGATAATTACTCTTCATTACACGACAATGCGTTTCCAAATTCACAACAACGAAAATTTGACATACCACCTTAAAAAAATAACTTGGTATTGAGTCTAGCTGTTTAAATTATACGTAAAAGTAGGTCATGATTGCATGTGGGGGGTATCAGAAGTAGTGAAGTTGTTGTCTTTCTTGGCATTACCTTGTTCCCTTCTGCTTTTGGCTGGTCCTCCTCACAGTCAATTCAGTTACCTGTAAAGCTAATAATGTTTGGCTTCTTCTAGTTGTACATTTATTCTCTTTTACTTGTCTGATGGTTTCTGGGATTTTTTCATTTCTTTACACAGAAAATCAGTCAACTACTGCAACAAGTCGCACAATTGAATCGATCACTGTTATTATCTCAACAGAAAGTACTGCCTTCAAATTGGAAAATGAAACAAGATGGCAGTGTTTAGCTTGTATCTCAGAGAGAGAGGCAGCAAGAAGCATTGCAGCTATGCTGAATGCCTCGTTTTGGCCGCTCGTATTCTTGTTTGGATTTATTATACTATAGATGGATATTCCAGTAGCAGCAGATTGGAACTGAGACAAACTCCTGCCTTTGCAGTGTGTTGAAGCACAGGGCAAGCTTATCAGACACCATCTATGCCCTCAAACGAGTTGAATCTGTTTGTGCTGCATAAAAACAGATTATCAGTTCACAGCAGGAGTGTATACAGATGATTTGTATTGATTTTTTCAGTATTTGTTGCAATATATATGTGCGATAAAAAGTCTTTATATTGTCAGCCATTTATCAACTTGGTTTACTGACTGGGAAGCTTATTCTTATGCACCAATATATTGGATATGTAAATAGATATGTTTTTCCTATCATGTTAGTCTAAACTAAGTACTTTCAAGTCAAAATGCACATAGCTCAATTGGCATAGTGCTTGTATTAACTTTAAGGTTAGAAATTCGATATCTCTACCCCATATATTAAAAAAT AATTGTAAAGTGAATGAGAAAATGAGATAGAGTGATGGAGCTTCTTTTGTTTGGGCCTTCTGTAATGGATATGGACATTTAGGGCACCAAAAAAGCAAAGATCTTGAAGAGGAATTTTGGATTTGGAGTGGGGTTACTCCTCTAATTTAGTGCTATTGTAATGGATAGACTCCACCAAAAGCCCCCAATTGGAACTTCAAATTTTCAGGAGTTTCTTCCTCTTCTGTTTGTTGCATGAACAGTGCAGCCCAAAGCCTTGAAATTTCTCCTCCATTTCTCATTTGCTTCAATTCTCCATGTCGAAACAGTAATTGGGTCGGCGTGTTAATGGCGGATGATGAATCCAGATCGATTTTCGACTGTGAAAACTTCCCTCTACAGCGGAAAATCGAATCCAAAGAATGGTCGATGGTGGTGATTAGGGATTCTCTTCCCGATGATGATTTCTCCGTTTTCCCACCTTCAAAACACGAGAATCTTCAACCCCCATCCATTGAAGAAGACGAACGAGGAAGCCCGGTTTCATTTCAATCCAATTCGCCATCATCGTTGTTTAGTTCGTCCCAATCATCTTCATCCTTCTCGTCGTTCTCATTTTCTGATGACGAGATTTCACACCCACACTCACCCAAGCCATCTGATTGTCAAATTCGAAAATCTATGACGGCTTCTAGGTGGCTGCTTTTTGGGGTTCAGATTCTACGCTCACGGATTACTGCAATGGCGCGTAGAACGGCTTTTTGGTTGTTTTCCCCTGCAGGAAGGATTGCGTTATTGATGACTCTTTTGTGGCTGTACAAGAGAGCTCGTAAGCGCCGTTTGCGTCAAAGCACCGAGGAATTAAAGATGATGATCAAGGAGAAAGACGAGAAAATCAGTCAACTACTGCAACAAGTCGCACAATTGAATCGATCACTGTTATTATCTCAACAGAAAGTACTGCCTTCAAATTGGAAAATGAAACAAGATGGCAGTGTTTAGCTTGTATCTCAGAGAGAGAGGCAGCAAGAAGCATTGCAGCTATGCTGAATGCCTCGTTTTGGCCGCTCGTATTCTTGTTTGGATTTATTATACTATAGATGGATATTCCAGTAGCAGCAGATTGGAACTGAGACAAACTCCTGCCTTTGCAGTGTGTTGAAGCACAGGGCAAGCTTATCAGACACCATCTATGCCCTCAAACGAGTTGAATCTGTTTGTGCTGCATAAAAACAGATTATCAGTTCACAGCAGGAGTGTATACAGATGATTTGTATTGATTTTTTCAGTATTTGTTGCAATATATATGTGCGATAAAAAGTCTTTATATTGTCAGCCATTTATCAACTTGGTTTACTGACTGGGAAGCTTATTCTTATGCACCAATATATTGGATATGTAAATAGATATGTTTTTCCTATCATGTTAGTCTAAACTAAGTACTTTCAAGTCAAAATGCACATAGCTCAATTGGCATAGTGCTTGTATTAACTTTAAGGTTAGAAATTCGATATCTCTACCCCATATATTAAAAAAT ATGAACAGTGCAGCCCAAAGCCTTGAAATTTCTCCTCCATTTCTCATTTGCTTCAATTCTCCATGTCGAAACAGTAATTGGGTCGGCGTGTTAATGGCGGATGATGAATCCAGATCGATTTTCGACTGTGAAAACTTCCCTCTACAGCGGAAAATCGAATCCAAAGAATGGTCGATGGTGGTGATTAGGGATTCTCTTCCCGATGATGATTTCTCCGTTTTCCCACCTTCAAAACACGAGAATCTTCAACCCCCATCCATTGAAGAAGACGAACGAGGAAGCCCGGTTTCATTTCAATCCAATTCGCCATCATCGTTGTTTAGTTCGTCCCAATCATCTTCATCCTTCTCGTCGTTCTCATTTTCTGATGACGAGATTTCACACCCACACTCACCCAAGCCATCTGATTGTCAAATTCGAAAATCTATGACGGCTTCTAGGTGGCTGCTTTTTGGGGTTCAGATTCTACGCTCACGGATTACTGCAATGGCGCGTAGAACGGCTTTTTGGTTGTTTTCCCCTGCAGGAAGGATTGCGTTATTGATGACTCTTTTGTGGCTGTACAAGAGAGCTCGTAAGCGCCGTTTGCGTCAAAGCACCGAGGAATTAAAGATGATGATCAAGGAGAAAGACGAGAAAATCAGTCAACTACTGCAACAAGTCGCACAATTGAATCGATCACTGTTATTATCTCAACAGAAAGTACTGCCTTCAAATTGGAAAATGAAACAAGATGGCAGTGTTTAG MNSAAQSLEISPPFLICFNSPCRNSNWVGVLMADDESRSIFDCENFPLQRKIESKEWSMVVIRDSLPDDDFSVFPPSKHENLQPPSIEEDERGSPVSFQSNSPSSLFSSSQSSSSFSSFSFSDDEISHPHSPKPSDCQIRKSMTASRWLLFGVQILRSRITAMARRTAFWLFSPAGRIALLMTLLWLYKRARKRRLRQSTEELKMMIKEKDEKISQLLQQVAQLNRSLLLSQQKVLPSNWKMKQDGSV Homology
BLAST of CaUC04G077980 vs. NCBI nr
Match: XP_038894063.1 (uncharacterized protein LOC120082810 [Benincasa hispida]) HSP 1 Score: 358.6 bits (919), Expect = 4.3e-95 Identity = 192/217 (88.48%), Postives = 202/217 (93.09%), Query Frame = 0
BLAST of CaUC04G077980 vs. NCBI nr
Match: XP_008444586.2 (PREDICTED: uncharacterized protein LOC103487835 [Cucumis melo]) HSP 1 Score: 330.9 bits (847), Expect = 9.6e-87 Identity = 184/228 (80.70%), Postives = 195/228 (85.53%), Query Frame = 0
BLAST of CaUC04G077980 vs. NCBI nr
Match: XP_011649918.1 (uncharacterized protein LOC105434678 [Cucumis sativus]) HSP 1 Score: 309.3 bits (791), Expect = 3.0e-80 Identity = 174/221 (78.73%), Postives = 187/221 (84.62%), Query Frame = 0
BLAST of CaUC04G077980 vs. NCBI nr
Match: KAE8652514.1 (hypothetical protein Csa_014185 [Cucumis sativus]) HSP 1 Score: 308.1 bits (788), Expect = 6.7e-80 Identity = 173/221 (78.28%), Postives = 187/221 (84.62%), Query Frame = 0
BLAST of CaUC04G077980 vs. NCBI nr
Match: XP_022137016.1 (uncharacterized protein LOC111008581 [Momordica charantia]) HSP 1 Score: 297.7 bits (761), Expect = 9.0e-77 Identity = 169/227 (74.45%), Postives = 189/227 (83.26%), Query Frame = 0
BLAST of CaUC04G077980 vs. ExPASy TrEMBL
Match: A0A1S3BA65 (uncharacterized protein LOC103487835 OS=Cucumis melo OX=3656 GN=LOC103487835 PE=4 SV=1) HSP 1 Score: 330.9 bits (847), Expect = 4.7e-87 Identity = 184/228 (80.70%), Postives = 195/228 (85.53%), Query Frame = 0
BLAST of CaUC04G077980 vs. ExPASy TrEMBL
Match: A0A0A0LVK1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G038390 PE=4 SV=1) HSP 1 Score: 309.3 bits (791), Expect = 1.5e-80 Identity = 174/221 (78.73%), Postives = 187/221 (84.62%), Query Frame = 0
BLAST of CaUC04G077980 vs. ExPASy TrEMBL
Match: A0A6J1C560 (uncharacterized protein LOC111008581 OS=Momordica charantia OX=3673 GN=LOC111008581 PE=4 SV=1) HSP 1 Score: 297.7 bits (761), Expect = 4.4e-77 Identity = 169/227 (74.45%), Postives = 189/227 (83.26%), Query Frame = 0
BLAST of CaUC04G077980 vs. ExPASy TrEMBL
Match: A0A6J1GB64 (uncharacterized protein LOC111452392 OS=Cucurbita moschata OX=3662 GN=LOC111452392 PE=4 SV=1) HSP 1 Score: 293.5 bits (750), Expect = 8.2e-76 Identity = 169/227 (74.45%), Postives = 181/227 (79.74%), Query Frame = 0
BLAST of CaUC04G077980 vs. ExPASy TrEMBL
Match: A0A6J1K6L4 (uncharacterized protein LOC111492777 OS=Cucurbita maxima OX=3661 GN=LOC111492777 PE=4 SV=1) HSP 1 Score: 286.6 bits (732), Expect = 1.0e-73 Identity = 167/230 (72.61%), Postives = 179/230 (77.83%), Query Frame = 0
BLAST of CaUC04G077980 vs. TAIR 10
Match: AT5G61360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G07730.1); Has 20 Blast hits to 20 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 49.3 bits (116), Expect = 5.2e-06 Identity = 55/185 (29.73%), Postives = 85/185 (45.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|