CaUC04G076500 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC04G076500
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	lipid transfer-like protein VAS
Location	Ciama_Chr04: 25828838 .. 25830558 (+)
RNA-Seq Expression	CaUC04G076500
Synteny	CaUC04G076500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTCCTTGAGATTCTTCGCGTTGTTCCTCCTCCTGATTTTTTCTCGGATTTTCCTCGGTTTTTCTCTAGATCTCGACCACTTTTTCAAAGGAATAGCATCGGACCTAATTCCGCCGTGTATGCAGCAGATTCTTCCGTGTCAACCATTCATCAAATTGCCGGAAAATCCGTCGCCAATGTGCTGTTTTCCATTGAAGGAGATGCTGGCCGGCGATCTTCCTTGCCTTTGCTCCTTCTTCAACAATATGGATCTGTTGAAGGCTCTGAATGTTACGCAGAGCCAAGCCTTGCAGCTTCCTAAGGCTTGCGGTGCCGCCGACGCTGATATTTCTGCCTGCAACCATGGTGAACTTCAAATTTCTCCCCTTATTTTTAACTTCACTGAATTCCATTTCCATTTTTCTTTATTTATACTATTAAAATAATGTGAACAGTATACGAGTCGTTTAAGTGACCTTCGTAGTTCGTAATTCTGTTTTCCCCCAAATTTTCAGCCGGGCCGCCGCCAACCGGTTCAACGGACGCGCCGCCGCCTCCTCCAGCCCCTAAAACTTCCGATGGTAAATTTCTGTGGTTTTTTCATAAATTATATTATAACTCTCTTAGTGCCCAAAATTTTGACTATGAATTGTGTGTGCTTTGTTGTTCGTTCTTGCATGAATTATTAATTGGTTAATTTGTGGATGATTTTGAGTGTTTTGTTGCTGAATTTTGTATTGATGTAATTAGTTAACTTTTTGTATAAATTATTAGTTAATTGTGTCTAAGATTTTAATTAAAATTTGATGAGTGTCAATTTCATAAAATATTAATCTTTAGGTTTCAGATTGTTCATACTTTTATATTTTTATTTTCATCCAATTTAACATTTTATTGAGTGTTTTGATTGTTGTAACTGAAATAAAATTGAAACTCCAAACCGGTTATGATATTTAAAAAGTATCTAATATAGATCATTTAGTGACTATATGATTTTTGGCCTATTCAATATGTTTAAAAAATTATGGACGAACCTTACAATAGAAATTCGAACACAAATATGCATTTTGTAGCAAATTCATAAATTGGATTCTAATTTAAATAGTTTTAAAATGGGCTTGAAACTATATATTTATAAATCATAAAACTAGTTGTAATTACTTCTACTATTTAGTTTACAATAAATTATTATTAATTTATTTATAAATATAATTTAGGTTAAAAATTTTATATAATTAATATTTTGTAATATTATATAATTTATACTACATCACATAATATATATTACATTAAAAAAAAAATTGAATTTATAACCTGACATATTGTATTTTTAAATGTTTTTATATTTATTTAATATAATTTTGTATTTTAAAATTTAAAATTCAAAATTTGGATACAATAAAAGGATATAAATGTTGTTTTCAAAATTTGCACCAACCGTTTTCAAAACTAAAAATCACATGGTCATGCAAAAAATTATTAGGAGCCAAGTGGTCGGGACACTTGCAAATATAACAAAAGTTTAGATCTTAAAGTTAAGTTTTGGTTTATTTGCAATAGTCTTGAAATGTTGCTGTATACATCATTATTATCCCTAAAAATGATACTTATTTTGTGATTAAAATGTTAATGTTGTAAATTGAATTCAGGTTCTTCTCCCAGCAAATCAACATACGGGATTGGCTATGGCTATGGCTTCGCAGCTTCGTTTGTGGCTTTGTTGCTTTCACCATTATAG

mRNA sequence

ATGTCGTCCTTGAGATTCTTCGCGTTGTTCCTCCTCCTGATTTTTTCTCGGATTTTCCTCGGTTTTTCTCTAGATCTCGACCACTTTTTCAAAGGAATAGCATCGGACCTAATTCCGCCGTGTATGCAGCAGATTCTTCCGTGTCAACCATTCATCAAATTGCCGGAAAATCCGTCGCCAATGTGCTGTTTTCCATTGAAGGAGATGCTGGCCGGCGATCTTCCTTGCCTTTGCTCCTTCTTCAACAATATGGATCTGTTGAAGGCTCTGAATGTTACGCAGAGCCAAGCCTTGCAGCTTCCTAAGGCTTGCGGTGCCGCCGACGCTGATATTTCTGCCTGCAACCATGCCGGGCCGCCGCCAACCGGTTCAACGGACGCGCCGCCGCCTCCTCCAGCCCCTAAAACTTCCGATGGTTCTTCTCCCAGCAAATCAACATACGGGATTGGCTATGGCTATGGCTTCGCAGCTTCGTTTGTGGCTTTGTTGCTTTCACCATTATAG

Coding sequence (CDS)

ATGTCGTCCTTGAGATTCTTCGCGTTGTTCCTCCTCCTGATTTTTTCTCGGATTTTCCTCGGTTTTTCTCTAGATCTCGACCACTTTTTCAAAGGAATAGCATCGGACCTAATTCCGCCGTGTATGCAGCAGATTCTTCCGTGTCAACCATTCATCAAATTGCCGGAAAATCCGTCGCCAATGTGCTGTTTTCCATTGAAGGAGATGCTGGCCGGCGATCTTCCTTGCCTTTGCTCCTTCTTCAACAATATGGATCTGTTGAAGGCTCTGAATGTTACGCAGAGCCAAGCCTTGCAGCTTCCTAAGGCTTGCGGTGCCGCCGACGCTGATATTTCTGCCTGCAACCATGCCGGGCCGCCGCCAACCGGTTCAACGGACGCGCCGCCGCCTCCTCCAGCCCCTAAAACTTCCGATGGTTCTTCTCCCAGCAAATCAACATACGGGATTGGCTATGGCTATGGCTTCGCAGCTTCGTTTGTGGCTTTGTTGCTTTCACCATTATAG

Protein sequence

MSSLRFFALFLLLIFSRIFLGFSLDLDHFFKGIASDLIPPCMQQILPCQPFIKLPENPSPMCCFPLKEMLAGDLPCLCSFFNNMDLLKALNVTQSQALQLPKACGAADADISACNHAGPPPTGSTDAPPPPPAPKTSDGSSPSKSTYGIGYGYGFAASFVALLLSPL

Homology

[Close]

BLAST of CaUC04G076500 vs. NCBI nr
Match: XP_038895529.1 (non-specific lipid transfer protein GPI-anchored 8-like [Benincasa hispida] >XP_038895530.1 non-specific lipid transfer protein GPI-anchored 8-like [Benincasa hispida])

HSP 1 Score: 251.9 bits (642), Expect = 3.8e-63
Identity = 137/177 (77.40%), Postives = 148/177 (83.62%), Query Frame = 0


Query: 1   MSSLRFFALFLLLIFSRIFLGFSLDLDHFFKGIASDLIPPCMQQILPCQPFIKLPENPSP 60
           M+S RFFA FLLLI SRIF GFS  L +FFKG+ SDLIPPCMQ+ILPCQPFIKLPENP P
Sbjct: 1   MASRRFFA-FLLLISSRIFFGFSQHLGNFFKGMDSDLIPPCMQKILPCQPFIKLPENPLP 60

Query: 61  MCCFPLKEMLAGDLPCLCSFFNNMDLLKALNVTQSQALQLPKACGAADADISACN-HAGP 120
           +CC PLKEMLAGDLPCLCSFFNN ++LK+LNVTQSQAL+LPKACGAAD DISACN HAGP
Sbjct: 61  VCCLPLKEMLAGDLPCLCSFFNNAEMLKSLNVTQSQALKLPKACGAADVDISACNHHAGP 120

Query: 121 PPTGSTDAPPPPPAPKTSDGSSPSK---------STYGIGYGYGFAASFVALLLSPL 168
           P TGSTDAPP PPAPKTSDGSSPSK          TYGI YG+  A+SFVALLLS L
Sbjct: 121 PSTGSTDAPPSPPAPKTSDGSSPSKPDSSSRSNNPTYGIDYGFAAASSFVALLLSAL 176

[Close]

BLAST of CaUC04G076500 vs. NCBI nr
Match: XP_008465997.1 (PREDICTED: lipid transfer-like protein VAS [Cucumis melo])

HSP 1 Score: 217.6 bits (553), Expect = 8.0e-53
Identity = 120/171 (70.18%), Postives = 137/171 (80.12%), Query Frame = 0


Query: 3   SLRFFALFLLLIFSRIFLGFSLDLDHFFKGIASDLIPPCMQQILPCQPFIKLPENPSPMC 62
           ++ FFA  +LL+FS +  GFS DLD FFKG+ S  IP CMQ+ILPCQPFIKLPENPS MC
Sbjct: 5   TMLFFAFLILLMFSSV--GFSQDLDAFFKGMESGKIPQCMQKILPCQPFIKLPENPSAMC 64

Query: 63  CFPLKEMLAGDLPCLCSFFNNMDLLKALNVTQSQALQLPKACGAADADISACNHAGPPPT 122
           C PLKEML GD+ CLCSFFN++D+LKALNVTQSQAL+LPKACGAAD DISAC   GPPPT
Sbjct: 65  CLPLKEMLVGDVQCLCSFFNDVDMLKALNVTQSQALKLPKACGAADVDISAC---GPPPT 124

Query: 123 GSTDAPPPPPAPKTSDGSSPSKS------TYGIGYGYGFAASFVALLLSPL 168
           GSTDAPPPPPA KT+D S  + S      + GIGYG+  A+SFVALLLSPL
Sbjct: 125 GSTDAPPPPPA-KTADDSKANGSRRNNNPSKGIGYGFAAASSFVALLLSPL 169

[Close]

BLAST of CaUC04G076500 vs. NCBI nr
Match: TYJ99041.1 (lipid transfer-like protein VAS [Cucumis melo var. makuwa])

HSP 1 Score: 211.8 bits (538), Expect = 4.4e-51
Identity = 113/154 (73.38%), Postives = 126/154 (81.82%), Query Frame = 0


Query: 20  LGFSLDLDHFFKGIASDLIPPCMQQILPCQPFIKLPENPSPMCCFPLKEMLAGDLPCLCS 79
           +GFS DLD FFKG+ S  IP CMQ+ILPCQPFIKLPENPS MCC PLKEML GD+ CLCS
Sbjct: 5   VGFSQDLDAFFKGMESGKIPQCMQKILPCQPFIKLPENPSAMCCLPLKEMLVGDVQCLCS 64

Query: 80  FFNNMDLLKALNVTQSQALQLPKACGAADADISACNHAGPPPTGSTDAPPPPPAPKTSDG 139
           FFN++D+LKALNVTQSQAL+LPKACGAAD DISAC   GPPPTGSTDAPPPPPA KT+D 
Sbjct: 65  FFNDVDMLKALNVTQSQALKLPKACGAADVDISAC---GPPPTGSTDAPPPPPA-KTADD 124

Query: 140 SSPSKS------TYGIGYGYGFAASFVALLLSPL 168
           S  + S      + GIGYG+  A+SFVALLLSPL
Sbjct: 125 SKANGSRRNNNPSKGIGYGFAAASSFVALLLSPL 154

[Close]

BLAST of CaUC04G076500 vs. NCBI nr
Match: XP_011650886.1 (non-specific lipid-transfer protein-like protein At5g64080 [Cucumis sativus] >KGN64183.1 hypothetical protein Csa_013403 [Cucumis sativus])

HSP 1 Score: 189.5 bits (480), Expect = 2.3e-44
Identity = 109/173 (63.01%), Postives = 128/173 (73.99%), Query Frame = 0


Query: 3   SLRFFALFLLLIFSRIFLGFSLDLDHFFKGI-ASDLIPPCMQQILPCQPFIKLPENPSPM 62
           ++ FFA+  LLI S +  GFS +LD FFKG+  +  IP CMQ+ILPCQPF KLPE PS +
Sbjct: 5   TILFFAVLTLLIVSSV--GFSEELDGFFKGMDEATKIPQCMQKILPCQPFFKLPEIPSSI 64

Query: 63  CCFPLKEMLAGDLPCLCSFFNNMDLLKALNVTQSQALQLPKACGAADADISACNHAGPPP 122
           CC PLKEML GDL C CSFFN+ ++LK LN TQSQ L LPKACGA DADISAC++   PP
Sbjct: 65  CCLPLKEMLVGDLQCFCSFFNDSEMLKVLNATQSQVLNLPKACGADDADISACDNDAQPP 124

Query: 123 TGSTDAPPPPPAPKTSDGS--SPSKSTYG-----IGYGYGFAASFVALLLSPL 168
           TGSTDAPP PPA KT+DGS  + S+  Y      IGYG+  A+SFVALLLSPL
Sbjct: 125 TGSTDAPPSPPA-KTADGSKANSSRRNYNNPSNIIGYGFAAASSFVALLLSPL 174

[Close]

BLAST of CaUC04G076500 vs. NCBI nr
Match: XP_023001811.1 (protein YLS3-like [Cucurbita maxima])

HSP 1 Score: 162.5 bits (410), Expect = 3.1e-36
Identity = 101/179 (56.42%), Postives = 122/179 (68.16%), Query Frame = 0


Query: 1   MSSLRFFALFLLLIFSRIFLGFSLDLDHFFKGIASDL---IPPCMQQILPCQPFIKLPEN 60
           M+S RFFA FLLLI S++F+GFS DL  F KG  S L   +PPCM+Q+L CQP+IK PEN
Sbjct: 1   MASSRFFA-FLLLISSQMFVGFSQDLSEFLKGTESILDRQLPPCMRQMLSCQPYIKSPEN 60

Query: 61  PSPMCCFPLKEMLAGDLPCLCSFFNNMDLLKALNVTQSQALQLPKACGAADADISACNHA 120
           P   CC PLKE+L  DLPCLCSFFNN  +L  LNV+QS+AL+LPK CG A+ DIS C+HA
Sbjct: 61  PPTACCTPLKELLNSDLPCLCSFFNNEKMLNTLNVSQSRALELPKNCG-AELDISGCSHA 120

Query: 121 GPPPTGSTDAP----PPPPAPKTS-------DGSSPSKSTYGIGYGYGFAASFVALLLS 166
              PTGST+ P     P P   TS        G++ +  TYGIG+G   A+S VALLLS
Sbjct: 121 -ESPTGSTEGPSSSTTPSPTANTSGLNDSSTGGATRNNPTYGIGHGVAAASSVVALLLS 176

[Close]

BLAST of CaUC04G076500 vs. ExPASy Swiss-Prot
Match: Q9LE56 (Non-specific lipid transfer protein GPI-anchored 3 OS=Arabidopsis thaliana OX=3702 GN=LTPG3 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.6e-19
Identity = 59/140 (42.14%), Postives = 81/140 (57.86%), Query Frame = 0


Query: 40  PCMQQILPCQPFIKLPENPSPMCCFPLKEMLAGDLPCLCSFFNNMDLLKALNVTQSQALQ 99
           PC+Q+++PCQP++ L   P   CC PL E++A D  CLC+ FNN+D+LK+LN+T+  AL 
Sbjct: 40  PCIQKLMPCQPYLHLATPPPATCCMPLNEIVAKDATCLCAVFNNVDMLKSLNLTKENALD 99

Query: 100 LPKACGAADADISACNHAGPPPTGSTD--APPPPPAPKTSDG-------------SSPSK 159
           LPKACG A AD+S C  +    + ST    P  PPA  TS G             + P+ 
Sbjct: 100 LPKACG-AKADVSLCKTSAGTNSSSTPPATPKTPPASSTSTGTGSGSTGNAAPSTAKPTS 159

Query: 160 STYGIGY-GYGFAASFVALL 164
           S   I + G  FA++ VA L
Sbjct: 160 SAPAINFGGLSFASAVVATL 178

[Close]

BLAST of CaUC04G076500 vs. ExPASy Swiss-Prot
Match: Q1PFD8 (Non-specific lipid transfer protein GPI-anchored 9 OS=Arabidopsis thaliana OX=3702 GN=LTPG9 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 7.3e-17
Identity = 53/124 (42.74%), Postives = 77/124 (62.10%), Query Frame = 0


Query: 41  CMQQILPCQPFI-KLPENPSPMCCFPLKEMLAGDLPCLCSFFNNMDLLKALNVTQSQALQ 100
           C+Q++LPCQP+I  L   P P CC P+KE++  D PCLC  FNN ++LKALN+T+  AL 
Sbjct: 33  CLQKLLPCQPYIHSLNPPPPPSCCGPMKEIVEKDAPCLCIAFNNPEVLKALNLTKENALL 92

Query: 101 LPKACGAADADISACNHAGPPPTGSTDAPPPPPAPKTSDGSSPSKSTYGIGYGYGFAASF 160
           LPKACG  + D+S C+            P P  +P +++G+S S ST      + F ++F
Sbjct: 93  LPKACG-VNPDVSLCSKIA--------TPSPIASPGSTNGTS-SASTISFN-RFSFLSAF 145

Query: 161 VALL 164
           VA++
Sbjct: 153 VAMI 145

[Close]

BLAST of CaUC04G076500 vs. ExPASy Swiss-Prot
Match: B3H587 (Non-specific lipid transfer protein GPI-anchored 8 OS=Arabidopsis thaliana OX=3702 GN=LTPG8 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 6.0e-11
Identity = 40/124 (32.26%), Postives = 71/124 (57.26%), Query Frame = 0


Query: 41  CMQQILPCQPFIKLPENPSPMCCFPLKEMLAGDLPCLCSFFNNMDLLKALNVTQSQALQL 100
           C+ +++PCQP+I L   P P+CC P+K++   D+ CLC+ F + DLL+ L +T+  A+++
Sbjct: 35  CVAKLMPCQPYIHLSIPPPPLCCNPMKQIAEKDVSCLCTAFKHPDLLRFLALTKENAIKI 94

Query: 101 PKACGAADADISACNHAGPPPTGSTDAPPPPPAPKTSDGSSPSKSTYGIGYGYGFAASFV 160
             +CG  + D S CN   P    S+ A  P  A   +  S+   +   I + +GF+  F+
Sbjct: 95  LDSCG-INHDPSVCNKTNP----SSPAALPEAATSGNSFSTKKNTALAITF-FGFSFVFL 152

Query: 161 ALLL 165
            +++
Sbjct: 155 GMII 152

[Close]

BLAST of CaUC04G076500 vs. ExPASy Swiss-Prot
Match: Q6NLF7 (Non-specific lipid transfer protein GPI-anchored 7 OS=Arabidopsis thaliana OX=3702 GN=LTPG7 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.1e-07
Identity = 42/128 (32.81%), Postives = 61/128 (47.66%), Query Frame = 0


Query: 41  CMQQILPCQPFIKLPENPSPMCCFPLKEMLAGDLPCLCSFFNNMDLLKALNVTQSQALQL 100
           C+ +++PC   +     P   CC  +KE +  +L CLC+ + +  LL   NVT  +AL L
Sbjct: 29  CVSKLVPCFNDLNTTTTPVKECCDSIKEAVEKELTCLCTIYTSPGLLAQFNVTTEKALGL 88

Query: 101 PKACGAADADISACNHAGPPPTGSTDAPPPPPAPKTSDGSSPSKSTYGIG---YGYGFAA 160
            + C     D+SAC   G P   S  A  PPPAP     +  +K   G G    GYG   
Sbjct: 89  SRRCNVT-TDLSACTAKGAP---SPKASLPPPAP-----AGNTKKDAGAGNKLAGYGVTT 147

Query: 161 SFVALLLS 166
             ++L+ S
Sbjct: 149 VILSLISS 147

[Close]

BLAST of CaUC04G076500 vs. ExPASy Swiss-Prot
Match: Q7EB72 (Non-specific lipid transfer protein GPI-anchored 15 OS=Arabidopsis thaliana OX=3702 GN=LTPG15 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 6.5e-05
Identity = 39/110 (35.45%), Postives = 50/110 (45.45%), Query Frame = 0


Query: 47  PCQPFIK-LPENPSPMCCFPLKEMLAGDLPCLCSFFNNMDLLKALNVTQSQALQLPKACG 106
           PC  +I      PS  CC  L  ++     C+CS  N+      LN+ ++QALQLP AC 
Sbjct: 39  PCLSYITGNSTTPSQPCCSRLDSVIKSSPQCICSAVNSPIPNIGLNINRTQALQLPNACN 98

Query: 107 AADADISACNHAGPPPTGSTDAPP-PPPAPKTSDGSSPSKSTYGIGYGYG 155
                ++ CN A    TG T  PP P P  KT D +    S  G   G G
Sbjct: 99  IQTPPLTQCNAA----TGPTAQPPAPSPTEKTPDVTLTPTSLPGARSGVG 144

[Close]

BLAST of CaUC04G076500 vs. ExPASy TrEMBL
Match: A0A1S3CQ75 (lipid transfer-like protein VAS OS=Cucumis melo OX=3656 GN=LOC103503471 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 3.9e-53
Identity = 120/171 (70.18%), Postives = 137/171 (80.12%), Query Frame = 0


Query: 3   SLRFFALFLLLIFSRIFLGFSLDLDHFFKGIASDLIPPCMQQILPCQPFIKLPENPSPMC 62
           ++ FFA  +LL+FS +  GFS DLD FFKG+ S  IP CMQ+ILPCQPFIKLPENPS MC
Sbjct: 5   TMLFFAFLILLMFSSV--GFSQDLDAFFKGMESGKIPQCMQKILPCQPFIKLPENPSAMC 64

Query: 63  CFPLKEMLAGDLPCLCSFFNNMDLLKALNVTQSQALQLPKACGAADADISACNHAGPPPT 122
           C PLKEML GD+ CLCSFFN++D+LKALNVTQSQAL+LPKACGAAD DISAC   GPPPT
Sbjct: 65  CLPLKEMLVGDVQCLCSFFNDVDMLKALNVTQSQALKLPKACGAADVDISAC---GPPPT 124

Query: 123 GSTDAPPPPPAPKTSDGSSPSKS------TYGIGYGYGFAASFVALLLSPL 168
           GSTDAPPPPPA KT+D S  + S      + GIGYG+  A+SFVALLLSPL
Sbjct: 125 GSTDAPPPPPA-KTADDSKANGSRRNNNPSKGIGYGFAAASSFVALLLSPL 169

[Close]

BLAST of CaUC04G076500 vs. ExPASy TrEMBL
Match: A0A5D3BJY6 (Lipid transfer-like protein VAS OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002450 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 2.1e-51
Identity = 113/154 (73.38%), Postives = 126/154 (81.82%), Query Frame = 0


Query: 20  LGFSLDLDHFFKGIASDLIPPCMQQILPCQPFIKLPENPSPMCCFPLKEMLAGDLPCLCS 79
           +GFS DLD FFKG+ S  IP CMQ+ILPCQPFIKLPENPS MCC PLKEML GD+ CLCS
Sbjct: 5   VGFSQDLDAFFKGMESGKIPQCMQKILPCQPFIKLPENPSAMCCLPLKEMLVGDVQCLCS 64

Query: 80  FFNNMDLLKALNVTQSQALQLPKACGAADADISACNHAGPPPTGSTDAPPPPPAPKTSDG 139
           FFN++D+LKALNVTQSQAL+LPKACGAAD DISAC   GPPPTGSTDAPPPPPA KT+D 
Sbjct: 65  FFNDVDMLKALNVTQSQALKLPKACGAADVDISAC---GPPPTGSTDAPPPPPA-KTADD 124

Query: 140 SSPSKS------TYGIGYGYGFAASFVALLLSPL 168
           S  + S      + GIGYG+  A+SFVALLLSPL
Sbjct: 125 SKANGSRRNNNPSKGIGYGFAAASSFVALLLSPL 154

[Close]

BLAST of CaUC04G076500 vs. ExPASy TrEMBL
Match: A0A0A0LQX5 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042900 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 1.1e-44
Identity = 109/173 (63.01%), Postives = 128/173 (73.99%), Query Frame = 0


Query: 3   SLRFFALFLLLIFSRIFLGFSLDLDHFFKGI-ASDLIPPCMQQILPCQPFIKLPENPSPM 62
           ++ FFA+  LLI S +  GFS +LD FFKG+  +  IP CMQ+ILPCQPF KLPE PS +
Sbjct: 5   TILFFAVLTLLIVSSV--GFSEELDGFFKGMDEATKIPQCMQKILPCQPFFKLPEIPSSI 64

Query: 63  CCFPLKEMLAGDLPCLCSFFNNMDLLKALNVTQSQALQLPKACGAADADISACNHAGPPP 122
           CC PLKEML GDL C CSFFN+ ++LK LN TQSQ L LPKACGA DADISAC++   PP
Sbjct: 65  CCLPLKEMLVGDLQCFCSFFNDSEMLKVLNATQSQVLNLPKACGADDADISACDNDAQPP 124

Query: 123 TGSTDAPPPPPAPKTSDGS--SPSKSTYG-----IGYGYGFAASFVALLLSPL 168
           TGSTDAPP PPA KT+DGS  + S+  Y      IGYG+  A+SFVALLLSPL
Sbjct: 125 TGSTDAPPSPPA-KTADGSKANSSRRNYNNPSNIIGYGFAAASSFVALLLSPL 174

[Close]

BLAST of CaUC04G076500 vs. ExPASy TrEMBL
Match: A0A6J1KJP7 (protein YLS3-like OS=Cucurbita maxima OX=3661 GN=LOC111495840 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.5e-36
Identity = 101/179 (56.42%), Postives = 122/179 (68.16%), Query Frame = 0


Query: 1   MSSLRFFALFLLLIFSRIFLGFSLDLDHFFKGIASDL---IPPCMQQILPCQPFIKLPEN 60
           M+S RFFA FLLLI S++F+GFS DL  F KG  S L   +PPCM+Q+L CQP+IK PEN
Sbjct: 1   MASSRFFA-FLLLISSQMFVGFSQDLSEFLKGTESILDRQLPPCMRQMLSCQPYIKSPEN 60

Query: 61  PSPMCCFPLKEMLAGDLPCLCSFFNNMDLLKALNVTQSQALQLPKACGAADADISACNHA 120
           P   CC PLKE+L  DLPCLCSFFNN  +L  LNV+QS+AL+LPK CG A+ DIS C+HA
Sbjct: 61  PPTACCTPLKELLNSDLPCLCSFFNNEKMLNTLNVSQSRALELPKNCG-AELDISGCSHA 120

Query: 121 GPPPTGSTDAP----PPPPAPKTS-------DGSSPSKSTYGIGYGYGFAASFVALLLS 166
              PTGST+ P     P P   TS        G++ +  TYGIG+G   A+S VALLLS
Sbjct: 121 -ESPTGSTEGPSSSTTPSPTANTSGLNDSSTGGATRNNPTYGIGHGVAAASSVVALLLS 176

[Close]

BLAST of CaUC04G076500 vs. ExPASy TrEMBL
Match: A0A6J1E8R9 (protein YLS3-like OS=Cucurbita moschata OX=3662 GN=LOC111431672 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.3e-35
Identity = 100/180 (55.56%), Postives = 122/180 (67.78%), Query Frame = 0


Query: 1   MSSLRFFALFLLLIFSRIFLGFSLDLDHFFKGIASDL---IPPCMQQILPCQPFIKLPEN 60
           M+S RF A FLLLI S++F+GFS DL  F KG  S L   +PPCM+Q+L CQP+IK PEN
Sbjct: 1   MASSRFVA-FLLLISSQMFVGFSQDLSEFLKGTESILDGNLPPCMRQMLSCQPYIKSPEN 60

Query: 61  PSPMCCFPLKEMLAGDLPCLCSFFNNMDLLKALNVTQSQALQLPKACGAADADISACNHA 120
           P P CC PLKE+L  D+PCLCSFF+N  +LK LNV+QS+AL+LPK CG AD DIS C+ A
Sbjct: 61  PPPACCTPLKELLDSDVPCLCSFFSNEKMLKTLNVSQSRALELPKNCG-ADLDISGCSDA 120

Query: 121 GPPPTGSTDAP-----PPPPAPKTS-------DGSSPSKSTYGIGYGYGFAASFVALLLS 166
              PTGST+ P      P P   TS        G++ +  TYGIG+G   A+S VALLLS
Sbjct: 121 -ESPTGSTEGPSSSTTTPSPTANTSGLNDSSTGGATRNNPTYGIGHGVAAASSVVALLLS 177

[Close]

BLAST of CaUC04G076500 vs. TAIR 10
Match: AT1G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 97.4 bits (241), Expect = 1.1e-20
Identity = 59/140 (42.14%), Postives = 81/140 (57.86%), Query Frame = 0


Query: 40  PCMQQILPCQPFIKLPENPSPMCCFPLKEMLAGDLPCLCSFFNNMDLLKALNVTQSQALQ 99
           PC+Q+++PCQP++ L   P   CC PL E++A D  CLC+ FNN+D+LK+LN+T+  AL 
Sbjct: 40  PCIQKLMPCQPYLHLATPPPATCCMPLNEIVAKDATCLCAVFNNVDMLKSLNLTKENALD 99

Query: 100 LPKACGAADADISACNHAGPPPTGSTD--APPPPPAPKTSDG-------------SSPSK 159
           LPKACG A AD+S C  +    + ST    P  PPA  TS G             + P+ 
Sbjct: 100 LPKACG-AKADVSLCKTSAGTNSSSTPPATPKTPPASSTSTGTGSGSTGNAAPSTAKPTS 159

Query: 160 STYGIGY-GYGFAASFVALL 164
           S   I + G  FA++ VA L
Sbjct: 160 SAPAINFGGLSFASAVVATL 178

[Close]

BLAST of CaUC04G076500 vs. TAIR 10
Match: AT1G73560.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 88.6 bits (218), Expect = 5.2e-18
Identity = 53/124 (42.74%), Postives = 77/124 (62.10%), Query Frame = 0


Query: 41  CMQQILPCQPFI-KLPENPSPMCCFPLKEMLAGDLPCLCSFFNNMDLLKALNVTQSQALQ 100
           C+Q++LPCQP+I  L   P P CC P+KE++  D PCLC  FNN ++LKALN+T+  AL 
Sbjct: 33  CLQKLLPCQPYIHSLNPPPPPSCCGPMKEIVEKDAPCLCIAFNNPEVLKALNLTKENALL 92

Query: 101 LPKACGAADADISACNHAGPPPTGSTDAPPPPPAPKTSDGSSPSKSTYGIGYGYGFAASF 160
           LPKACG  + D+S C+            P P  +P +++G+S S ST      + F ++F
Sbjct: 93  LPKACG-VNPDVSLCSKIA--------TPSPIASPGSTNGTS-SASTISFN-RFSFLSAF 145

Query: 161 VALL 164
           VA++
Sbjct: 153 VAMI 145

[Close]

BLAST of CaUC04G076500 vs. TAIR 10
Match: AT1G73550.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 70.5 bits (171), Expect = 1.5e-12
Identity = 31/79 (39.24%), Postives = 51/79 (64.56%), Query Frame = 0


Query: 41  CMQQILPCQPFIKLPENPSPMCCFPLKEMLAGDLPCLCSFFNNMDLLKALNVTQSQALQL 100
           C+ +++PCQP+I L   P P+CC P+K++   D+ CLC+ F + DLL+ L +T+  A+++
Sbjct: 35  CVAKLMPCQPYIHLSIPPPPLCCNPMKQIAEKDVSCLCTAFKHPDLLRFLALTKENAIKI 94

Query: 101 PKACGAADADISACNHAGP 120
             +CG  + D S CN   P
Sbjct: 95  LDSCG-INHDPSVCNKTNP 112

[Close]

BLAST of CaUC04G076500 vs. TAIR 10
Match: AT1G73550.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 68.9 bits (167), Expect = 4.3e-12
Identity = 40/124 (32.26%), Postives = 71/124 (57.26%), Query Frame = 0


Query: 41  CMQQILPCQPFIKLPENPSPMCCFPLKEMLAGDLPCLCSFFNNMDLLKALNVTQSQALQL 100
           C+ +++PCQP+I L   P P+CC P+K++   D+ CLC+ F + DLL+ L +T+  A+++
Sbjct: 35  CVAKLMPCQPYIHLSIPPPPLCCNPMKQIAEKDVSCLCTAFKHPDLLRFLALTKENAIKI 94

Query: 101 PKACGAADADISACNHAGPPPTGSTDAPPPPPAPKTSDGSSPSKSTYGIGYGYGFAASFV 160
             +CG  + D S CN   P    S+ A  P  A   +  S+   +   I + +GF+  F+
Sbjct: 95  LDSCG-INHDPSVCNKTNP----SSPAALPEAATSGNSFSTKKNTALAITF-FGFSFVFL 152

Query: 161 ALLL 165
            +++
Sbjct: 155 GMII 152

[Close]

BLAST of CaUC04G076500 vs. TAIR 10
Match: AT1G62790.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 57.0 bits (136), Expect = 1.7e-08
Identity = 34/109 (31.19%), Postives = 53/109 (48.62%), Query Frame = 0


Query: 41  CMQQILPCQPFIKLPENPSPMCCFPLKEMLAGDLPCLCSFFNNMDLLKALNVTQSQALQL 100
           C+ +++PC   +     P   CC  +KE +  +L CLC+ + +  LL   NVT  +AL L
Sbjct: 29  CVSKLVPCFNDLNTTTTPVKECCDSIKEAVEKELTCLCTIYTSPGLLAQFNVTTEKALGL 88

Query: 101 PKACGAADADISACNHAGPPPTGSTDAPPPPPAPKTSDGSSPSKSTYGI 150
            + C     D+SAC   G P   ++  PP P   K   G+    + YG+
Sbjct: 89  SRRCNVT-TDLSACTAKGAPSPKASLPPPAPGNTKKDAGAGNKLAGYGV 136

The following BLAST results are available for this feature:

BLAST of CaUC04G076500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895529.1	3.8e-63	77.40	non-specific lipid transfer protein GPI-anchored 8-like [Benincasa hispida] >XP_...	[more]
XP_008465997.1	8.0e-53	70.18	PREDICTED: lipid transfer-like protein VAS [Cucumis melo]	[more]
TYJ99041.1	4.4e-51	73.38	lipid transfer-like protein VAS [Cucumis melo var. makuwa]	[more]
XP_011650886.1	2.3e-44	63.01	non-specific lipid-transfer protein-like protein At5g64080 [Cucumis sativus] >KG...	[more]
XP_023001811.1	3.1e-36	56.42	protein YLS3-like [Cucurbita maxima]	[more]

BLAST of CaUC04G076500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LE56	1.6e-19	42.14	Non-specific lipid transfer protein GPI-anchored 3 OS=Arabidopsis thaliana OX=37...	[more]
Q1PFD8	7.3e-17	42.74	Non-specific lipid transfer protein GPI-anchored 9 OS=Arabidopsis thaliana OX=37...	[more]
B3H587	6.0e-11	32.26	Non-specific lipid transfer protein GPI-anchored 8 OS=Arabidopsis thaliana OX=37...	[more]
Q6NLF7	3.1e-07	32.81	Non-specific lipid transfer protein GPI-anchored 7 OS=Arabidopsis thaliana OX=37...	[more]
Q7EB72	6.5e-05	35.45	Non-specific lipid transfer protein GPI-anchored 15 OS=Arabidopsis thaliana OX=3...	[more]

BLAST of CaUC04G076500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CQ75	3.9e-53	70.18	lipid transfer-like protein VAS OS=Cucumis melo OX=3656 GN=LOC103503471 PE=4 SV=...	[more]
A0A5D3BJY6	2.1e-51	73.38	Lipid transfer-like protein VAS OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A0A0LQX5	1.1e-44	63.01	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042900 PE=4 SV...	[more]
A0A6J1KJP7	1.5e-36	56.42	protein YLS3-like OS=Cucurbita maxima OX=3661 GN=LOC111495840 PE=4 SV=1	[more]
A0A6J1E8R9	1.3e-35	55.56	protein YLS3-like OS=Cucurbita moschata OX=3662 GN=LOC111431672 PE=4 SV=1	[more]

BLAST of CaUC04G076500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18280.1	1.1e-20	42.14	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G73560.1	5.2e-18	42.74	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G73550.2	1.5e-12	39.24	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G73550.1	4.3e-12	32.26	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G62790.2	1.7e-08	31.19	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 40..110 e-value: 1.1E-12 score: 49.6
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 41..108
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 38..114 e-value: 4.1E-15 score: 55.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..137
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..143
None	No IPR available	PANTHER	PTHR33044:SF100	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 6..163
None	No IPR available	CDD	cd00010	AAI_LTSS	coord: 45..105 e-value: 2.62245E-11 score: 54.3551
IPR043325	Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein	PANTHER	PTHR33044	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED	coord: 6..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC04G076500.1	CaUC04G076500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0005886	plasma membrane