CaUC04G074310 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGAACCTCAGTCTGCTCCGTAAGGCACTTGGATCCAACTTCATTTCTCGATCGGCGGCGGCAAACGATCGCCTCCCTCTGTTTTTCCGCCAATCTCCAAGTTTCTTCTCCACGGAAGGTGAACAACCTCCAGCTGAATCGCCCGCCGATTCTTTTCTCGATACATCAAAAACAACAGGTATGAAGTTCGTTCCTACGTCGCCGCCGCGTCTGGACGTTGTCCTTCTGTCGTGTGTGATATTGGGAGAGGTTTAGGGTTTATAAATGGTGGCGGGTTAGAATTTTGGGAACAACTTTCATAAATTTCTCGTTTATTTGAGCTTCTGGCAATAAGTTTGGCTGATTGTATTATACGAGTTAGGTTTTGTATCTTTGATTCTGTAAGGTTGAGAAACTTCGATTCATTAATCGCTGCAAAATCCTTTTGGTGTACTTACTTACTGATGTACTGTTATTATTTATGTAATTGATTTCTCGTCTGATTTTATGTGGTACAATGCATAATAAGTTTGTTGTGATACTCTTCTCAGGTTTGGTGTATGGAAAATTGTATGGTATCACAAGGAATACTCTAAAAACGGACATGGTCAATTTGCTTGAAGGATGTAATTTGAGTTTGGATGATCTCAAAGTTGAATACAGTCGGATTTTCAAGCCAATCTCTATGTAATATTCTTCCTTTTAGTTTATTTTGCATATCGGTGCTTTCTGTATTATGTTCTGCCACTGTTGTTATGGTTGTATTCCTACTGCGTCATGGAAACTAAAATGATCAAAGAATATCTAAGTGCCCTTTTGATCCTTCGATCATTTTAAGACAAATCCAGTTCTTTACTCTGGGTATTAGCTTACATGTTAGTCCATTGGATATATGTTCAATTAAGTGTGTTGTACATGTATATATATTTGAGTAACACTGGTGTTTGAGGTTGGTTTTCATTAACTATTTATGGATGTTGTAACCAGGATGATACAGTTCCCCTCACGACAGGCCTTTGAGCATGCTTTTGTAATGATTAGAAGAAAAGGTCGCTTGTACAGAATGGAACGGGTGATGTTTTGATGGATACCTAATAATTGTTTATTTTGTTTTGTTTTTAAAGTTTTAGAAATCTATAACTTTTATTCTAAATTTCAGGTTGATCGTTCGCAGTGGGACCTTCTTTCACCTTACAATGGAAAAACTGTAATGCCAAAACTTATGCACTTATTATCAATTGAAAAATCTCTTTTTTCAATTATAGTCTTGTTTTTGCCCTCGGTAACTTTGATCAGAAGGCAACCCATTCTACTTTAGTTTTGTTTATCTAATATCATGTGATTGTATGACATGGTTTCAAGGATCAAGCATACATATCAATATGTTCTCTGTTCTTCTACTGCCTAATGATTAGTTTTAATGGATTGTTCCTTACACTCTCCAAATTTAAAACTGTTTATAGAGAAACTAATTTTTCATGTTAAGCTGTTTAGAAGGGAGTAAAAAATGTTGTTAAGTTTCATGTGGTTGGGATCTCCTTTTAGTAGCTTCTCAAGAACGTAAACTTGCAGTAACTACCTCAACTAGGAAGGTTAAGGATTTTTGTAATAAGATCATTGGTAAGGATGATAATGCACTGATGTGATTAGATTTTCAATTGAAACTTGATGCTTCAAAGAATGGGGATTGGCTACCTTCCTGGCCTTAGGTTTGTGGTTCGTAAAATCATTTGCAGCTTATTGTGCAGACTGCAGTCAATGGGCATCTCATATTAAATATAAACCTTGGGTTGTTTCTGAATTTGTTTCCGTAATATTCATTTTTCTTTGTATTTATAGGTTCTGCTGCAAGGAATACCTCGAAATGCAATGATAGAAGACGTGGAACACTTCTTATCTGGCTGTGACTATGATGGAACCTCAATCAATATATTTATCAGGTAGAGATCAAATATTTGTGGCAAAGTTTAGAATTAGTATTTCCTTGCTATTACTTGTGGTAAATAGTCACCTCTTTTACTTATAGCTTTGCTAATCTTTCTCCAATGGGAAAGGTTTATTGTAACTCCTTTGGATACAAGTTTATTGCTCTGTTCTTTTGTAAGTTTCCTACTGTAACGCTCTAGTTAGGATTATATGGGGATAATTCGTATTATTATTAGTAAGGAGCATATTAGTAAATAACTAGTAAGTTTGTTAGTGTTTTTAGTTAGAAATAGAGAGAGTGGGTTGAGAGTAGGGTGTGAAGAATTTTGTAGGATTTCTTTAGTTGGGAATTTGGGAGAGTCTAGTCCTCTCGAAAGGCTAGTGGCTACCTTTTTACTTGTTCTTATGATATTATAGCATATTTCCTTATATTTTCATATATTTCTATATTTTAGTTTTCTTGAGTTTGCTGTGTGTTCTTATTAGGAGGTATCCTAACAAATACACCAATGAAATTGTTTCCTATAAAGAAAATAAGTAGGTGTTTCAACCCCCAACTTCAAGTGGGTGGGGAGTGGGCTAGTTGTAATTGTAATAGTTGATGTCTCATACTATTATAACCTACAATTAACTACCATATTACTATTTCAAATCACTCTTTGATACAATGTTTACGATTTGTTACCTGTTTACCATTTCCTACTCATCCTCTCTTTTCCTCTTTGGTACAGTGTTAGTATTTCCTACCTAGACTAAAACAGTTTGCACTCCAAACACGGACTATTATAATTGAAATTATTATGTAGTGTGAACTTTGTGTGATGCATCATTTATACATCATTGCAGGTCATCCTTTCCAGATCCCATCAAAATGGCAACGGTGCTGTTCCCTTCACCAACACAAGCAATGCATGCATTTCTTACAAAGAACAGAGGCTTTTGTCTGAACAACCGAATTTCGATGCAGGTTCTCCAATAACTAGTAACTCTTATCATCTGTGTTGGACACATTCTTTTGGTGGCTCGTTGGCTGGACGTTTTGTAGTAGTCTTTATTGAGTTATGACTTGCATCTTCATATCTCAAGCCTCCAGTAGGTTAGCAATCACATGCACATTCAAAGTGACATGAAATCTTTCTTTCTTTTCACATATTAGCAGTTTGTTTGTGCTAAAGAATCTGCATTTGCAAGAAGAAGGATATTTGGATTTTGAATTTAGGCCATGTTTACTATTCCGTAATCAAAATTGCAG ATGTCGAACCTCAGTCTGCTCCGTAAGGCACTTGGATCCAACTTCATTTCTCGATCGGCGGCGGCAAACGATCGCCTCCCTCTGTTTTTCCGCCAATCTCCAAGTTTCTTCTCCACGGAAGGTGAACAACCTCCAGCTGAATCGCCCGCCGATTCTTTTCTCGATACATCAAAAACAACAGGTATGAAGTTCGTTCCTACGTCGCCGCCGCGTCTGGACGTTGTCCTTCTGTCGTGTGTGATATTGGGAGAGGCCTTTGAGCATGCTTTTGTAATGATTAGAAGAAAAGGTCGCTTGTACAGAATGGAACGGGTTGATCGTTCGCAGTGGGACCTTCTTTCACCTTACAATGGAAAAACTGTTCTGCTGCAAGGAATACCTCGAAATGCAATGATAGAAGACGTGGAACACTTCTTATCTGGCTGTGACTATGATGGAACCTCAATCAATATATTTATCAGGATTTCTTTAGTTGGGAATTTGGGAGAGTCTAGTCCTCTCGAAAGGCTAGTGGCTACCTTTTTACTTGTCATCCTTTCCAGATCCCATCAAAATGGCAACGGTGCTGTTCCCTTCACCAACACAAGCAATGCATGCATTTCTTACAAAGAACAGAGGCTTTTGTCTGAACAACCGAATTTCGATGCAGGTTCTCCAATAACTAGTAACTCTTATCATCTGTGTTGGACACATTCTTTTGGTGGCTCGTTGGCTGGACGTTTTGTAGTAGTCTTTATTGAGTTATGACTTGCATCTTCATATCTCAAGCCTCCAGTAGGTTAGCAATCACATGCACATTCAAAGTGACATGAAATCTTTCTTTCTTTTCACATATTAGCAGTTTGTTTGTGCTAAAGAATCTGCATTTGCAAGAAGAAGGATATTTGGATTTTGAATTTAGGCCATGTTTACTATTCCGTAATCAAAATTGCAG ATGTCGAACCTCAGTCTGCTCCGTAAGGCACTTGGATCCAACTTCATTTCTCGATCGGCGGCGGCAAACGATCGCCTCCCTCTGTTTTTCCGCCAATCTCCAAGTTTCTTCTCCACGGAAGGTGAACAACCTCCAGCTGAATCGCCCGCCGATTCTTTTCTCGATACATCAAAAACAACAGGTATGAAGTTCGTTCCTACGTCGCCGCCGCGTCTGGACGTTGTCCTTCTGTCGTGTGTGATATTGGGAGAGGCCTTTGAGCATGCTTTTGTAATGATTAGAAGAAAAGGTCGCTTGTACAGAATGGAACGGGTTGATCGTTCGCAGTGGGACCTTCTTTCACCTTACAATGGAAAAACTGTTCTGCTGCAAGGAATACCTCGAAATGCAATGATAGAAGACGTGGAACACTTCTTATCTGGCTGTGACTATGATGGAACCTCAATCAATATATTTATCAGGATTTCTTTAGTTGGGAATTTGGGAGAGTCTAGTCCTCTCGAAAGGCTAGTGGCTACCTTTTTACTTGTCATCCTTTCCAGATCCCATCAAAATGGCAACGGTGCTGTTCCCTTCACCAACACAAGCAATGCATGCATTTCTTACAAAGAACAGAGGCTTTTGTCTGAACAACCGAATTTCGATGCAGGTTCTCCAATAACTAGTAACTCTTATCATCTGTGTTGGACACATTCTTTTGGTGGCTCGTTGGCTGGACGTTTTGTAGTAGTCTTTATTGAGTTATGA MSNLSLLRKALGSNFISRSAAANDRLPLFFRQSPSFFSTEGEQPPAESPADSFLDTSKTTGMKFVPTSPPRLDVVLLSCVILGEAFEHAFVMIRRKGRLYRMERVDRSQWDLLSPYNGKTVLLQGIPRNAMIEDVEHFLSGCDYDGTSINIFIRISLVGNLGESSPLERLVATFLLVILSRSHQNGNGAVPFTNTSNACISYKEQRLLSEQPNFDAGSPITSNSYHLCWTHSFGGSLAGRFVVVFIEL Homology
BLAST of CaUC04G074310 vs. NCBI nr
Match: KAA0047320.1 (uncharacterized protein E6C27_scaffold908G001380 [Cucumis melo var. makuwa]) HSP 1 Score: 271.9 bits (694), Expect = 5.3e-69 Identity = 160/303 (52.81%), Postives = 177/303 (58.42%), Query Frame = 0
BLAST of CaUC04G074310 vs. NCBI nr
Match: XP_022972751.1 (uncharacterized protein LOC111471264 [Cucurbita maxima]) HSP 1 Score: 195.7 bits (496), Expect = 4.8e-46 Identity = 106/186 (56.99%), Postives = 127/186 (68.28%), Query Frame = 0
BLAST of CaUC04G074310 vs. NCBI nr
Match: XP_023518188.1 (uncharacterized protein LOC111781730 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 191.4 bits (485), Expect = 9.1e-45 Identity = 104/186 (55.91%), Postives = 126/186 (67.74%), Query Frame = 0
BLAST of CaUC04G074310 vs. NCBI nr
Match: XP_022963065.1 (uncharacterized protein LOC111463377 [Cucurbita moschata] >KAG7027296.1 hypothetical protein SDJN02_11308 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 190.7 bits (483), Expect = 1.6e-44 Identity = 104/186 (55.91%), Postives = 126/186 (67.74%), Query Frame = 0
BLAST of CaUC04G074310 vs. NCBI nr
Match: XP_023544682.1 (uncharacterized protein LOC111804194 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 189.1 bits (479), Expect = 4.5e-44 Identity = 104/187 (55.61%), Postives = 127/187 (67.91%), Query Frame = 0
BLAST of CaUC04G074310 vs. ExPASy TrEMBL
Match: A0A5A7TVY8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G001380 PE=4 SV=1) HSP 1 Score: 271.9 bits (694), Expect = 2.6e-69 Identity = 160/303 (52.81%), Postives = 177/303 (58.42%), Query Frame = 0
BLAST of CaUC04G074310 vs. ExPASy TrEMBL
Match: A0A6J1I6U3 (uncharacterized protein LOC111471264 OS=Cucurbita maxima OX=3661 GN=LOC111471264 PE=4 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 2.3e-46 Identity = 106/186 (56.99%), Postives = 127/186 (68.28%), Query Frame = 0
BLAST of CaUC04G074310 vs. ExPASy TrEMBL
Match: A0A6J1HGY5 (uncharacterized protein LOC111463377 OS=Cucurbita moschata OX=3662 GN=LOC111463377 PE=4 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 7.5e-45 Identity = 104/186 (55.91%), Postives = 126/186 (67.74%), Query Frame = 0
BLAST of CaUC04G074310 vs. ExPASy TrEMBL
Match: A0A6J1GDZ1 (uncharacterized protein LOC111453126 OS=Cucurbita moschata OX=3662 GN=LOC111453126 PE=4 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 9.2e-43 Identity = 100/187 (53.48%), Postives = 126/187 (67.38%), Query Frame = 0
BLAST of CaUC04G074310 vs. ExPASy TrEMBL
Match: A0A1S3BH58 (uncharacterized protein LOC103489786 OS=Cucumis melo OX=3656 GN=LOC103489786 PE=4 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 7.8e-42 Identity = 101/182 (55.49%), Postives = 118/182 (64.84%), Query Frame = 0
BLAST of CaUC04G074310 vs. TAIR 10
Match: AT5G02740.1 (Ribosomal protein S24e family protein ) HSP 1 Score: 75.5 bits (184), Expect = 6.8e-14 Identity = 35/75 (46.67%), Postives = 50/75 (66.67%), Query Frame = 0
BLAST of CaUC04G074310 vs. TAIR 10
Match: AT5G02740.2 (Ribosomal protein S24e family protein ) HSP 1 Score: 75.1 bits (183), Expect = 8.9e-14 Identity = 33/65 (50.77%), Postives = 45/65 (69.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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