CaUC04G072250 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC04G072250
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Non-specific lipid-transfer protein
Location	Ciama_Chr04: 20827724 .. 20828796 (-)
RNA-Seq Expression	CaUC04G072250
Synteny	CaUC04G072250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGAGTAAGTTGAACACAATTGTAAAGTTGGGTTTGGCCATCACATTCTTGTGTGCCGTAATAGGTGGAGGGGTGACGACGGAGGCAGCCGTGACGTGCAACCAAGTGGTCAGCGGTTTGAGTCCCTGTATTCAGTATGTGACCGGTGGAGGAGCCCCGTCGTCGACCTGTTGCTACGGTGTGAAACAGCTAAACACGGTGGCTCAGACGACGCAGGTCCGACAAGCGGTATGTCAGTGCTTGAAATCAGTGGTGAAGGAAGTTAAGTATAATGCTCAAAACGTTGCTAATGCTGCTGCTCTTCCGGCCAAGTGCGGCGTCAAGCTTCCCTACCCTATCAACCCCAATGTTGACTGTAAAACGTAACAATATATCTCTCAAATTTTACCTTCATATCTTTCAATTTTATTGGAAAATTATACCCTTTTTTATGTCTATGTTTTGCTTATACTTTTTCATAATTTTACTCATCTTTTTTACTTTCTTACCTCTTGAATTTAGTTTTCATCTAATTTCTAACTCAGTTTTGAGTTCAACTTTTACACTTTTACTCCCTCAATTTTTACTAATATTATGTTAATGCTCACTTTTAGTCTTAGATAATAAAATGATTTCAAATGAAAATTGCATGAAAAATTAGTGAAAACTTACTTAAATTAATATTACTGTAATATCTTTCAATTAAGTAATAAACTATTAACATAAATGACCAAATCAAGCATTAGTGAGAAATTAAAGGGTAAAAAAAACACTTTATAAATAAGAATTTAACTCTAATATTTTGAAATTTAAGGACTAAATAAAAATTAAACTCAAAATTTACAAATAAAAAATGTAACTTAGAGAGTAAGTGAAATTTTACTCAAAACTCAGCCTGTTTTCTATTTATTAACTTTCAGCACATTTATTTTAGTTCTTAAAAAAAGATACAATAACTTTCTTTTCTCTTAAACAGAATTAAAAAAAAAAAAAAATACTAATTAATTGACAACTATTATTTTGCAGTATTAAAATGTGAGGAAAGTCAAGCAGCAACTCTAGTAGACGGCGTCGTATCGATGGAAGAATAA

mRNA sequence

ATGATGAGTAAGTTGAACACAATTGTAAAGTTGGGTTTGGCCATCACATTCTTGTGTGCCGTAATAGGTGGAGGGGTGACGACGGAGGCAGCCGTGACGTGCAACCAAGTGGTCAGCGGTTTGAGTCCCTGTATTCAGTATGTGACCGGTGGAGGAGCCCCGTCGTCGACCTGTTGCTACGGTGTGAAACAGCTAAACACGGTGGCTCAGACGACGCAGGTCCGACAAGCGGTATGTCAGTGCTTGAAATCAGTGGTGAAGGAAGTTAAGTATAATGCTCAAAACGTTGCTAATGCTGCTGCTCTTCCGGCCAAGTGCGGCGTCAAGCTTCCCTACCCTATCAACCCCAATGTTGACTTATTAAAATGTGAGGAAAGTCAAGCAGCAACTCTAGTAGACGGCGTCGTATCGATGGAAGAATAA

Coding sequence (CDS)

ATGATGAGTAAGTTGAACACAATTGTAAAGTTGGGTTTGGCCATCACATTCTTGTGTGCCGTAATAGGTGGAGGGGTGACGACGGAGGCAGCCGTGACGTGCAACCAAGTGGTCAGCGGTTTGAGTCCCTGTATTCAGTATGTGACCGGTGGAGGAGCCCCGTCGTCGACCTGTTGCTACGGTGTGAAACAGCTAAACACGGTGGCTCAGACGACGCAGGTCCGACAAGCGGTATGTCAGTGCTTGAAATCAGTGGTGAAGGAAGTTAAGTATAATGCTCAAAACGTTGCTAATGCTGCTGCTCTTCCGGCCAAGTGCGGCGTCAAGCTTCCCTACCCTATCAACCCCAATGTTGACTTATTAAAATGTGAGGAAAGTCAAGCAGCAACTCTAGTAGACGGCGTCGTATCGATGGAAGAATAA

Protein sequence

MMSKLNTIVKLGLAITFLCAVIGGGVTTEAAVTCNQVVSGLSPCIQYVTGGGAPSSTCCYGVKQLNTVAQTTQVRQAVCQCLKSVVKEVKYNAQNVANAAALPAKCGVKLPYPINPNVDLLKCEESQAATLVDGVVSMEE

Homology

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BLAST of CaUC04G072250 vs. NCBI nr
Match: XP_004151695.1 (non-specific lipid-transfer protein 1 [Cucumis sativus] >KGN54448.1 hypothetical protein Csa_012253 [Cucumis sativus])

HSP 1 Score: 175.6 bits (444), Expect = 2.9e-40
Identity = 88/119 (73.95%), Postives = 98/119 (82.35%), Query Frame = 0


Query: 1   MMSKLNTIVKLGLAITFLCAVIGGGVTTEAAVTCNQVVSGLSPCIQYVTGGGAPSSTCCY 60
           M S L TI+KLGL +TFL AVIGGGVTTEA V+CNQV++ L PC+ YVTGGG PSS CC 
Sbjct: 1   MASNLITILKLGLTVTFLYAVIGGGVTTEAVVSCNQVITNLRPCVSYVTGGGYPSSNCCS 60

Query: 61  GVKQLNTVAQTTQVRQAVCQCLKSVVKEVKYNAQNVANAAALPAKCGVKLPYPINPNVD 120
           GVKQL+T A+TT  RQAVC+CLKS+V  VKYN QNVANAAALP KCGV LPY INPNVD
Sbjct: 61  GVKQLSTAARTTPDRQAVCRCLKSLVNGVKYNGQNVANAAALPTKCGVTLPYSINPNVD 119

[Close]

BLAST of CaUC04G072250 vs. NCBI nr
Match: KAA0025399.1 (non-specific lipid-transfer protein 1-like [Cucumis melo var. makuwa] >TYK09774.1 non-specific lipid-transfer protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 171.4 bits (433), Expect = 5.5e-39
Identity = 87/119 (73.11%), Postives = 94/119 (78.99%), Query Frame = 0


Query: 1   MMSKLNTIVKLGLAITFLCAVIGGGVTTEAAVTCNQVVSGLSPCIQYVTGGGAPSSTCCY 60
           M S L TI+KLGL +T L AVIGGGVTTEA VTCNQVVS LSPCI YVTGGG+PS  CC 
Sbjct: 1   MASNLITILKLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCS 60

Query: 61  GVKQLNTVAQTTQVRQAVCQCLKSVVKEVKYNAQNVANAAALPAKCGVKLPYPINPNVD 120
           GV+QLN  AQTT  RQ VC+CLKS++  V YN QNVANAAALP KCGV LPY INPN D
Sbjct: 61  GVRQLNKAAQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNAD 119

[Close]

BLAST of CaUC04G072250 vs. NCBI nr
Match: XP_008463259.1 (PREDICTED: non-specific lipid-transfer protein 1-like [Cucumis melo])

HSP 1 Score: 171.4 bits (433), Expect = 5.5e-39
Identity = 87/119 (73.11%), Postives = 94/119 (78.99%), Query Frame = 0


Query: 1   MMSKLNTIVKLGLAITFLCAVIGGGVTTEAAVTCNQVVSGLSPCIQYVTGGGAPSSTCCY 60
           M S L TI+KLGL +T L AVIGGGVTTEA VTCNQVVS LSPCI YVTGGG+PS  CC 
Sbjct: 1   MASNLITILKLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCS 60

Query: 61  GVKQLNTVAQTTQVRQAVCQCLKSVVKEVKYNAQNVANAAALPAKCGVKLPYPINPNVD 120
           GV+QLN  AQTT  RQ VC+CLKS++  V YN QNVANAAALP KCGV LPY INPN D
Sbjct: 61  GVRQLNKAAQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNAD 119

[Close]

BLAST of CaUC04G072250 vs. NCBI nr
Match: XP_038883886.1 (non-specific lipid-transfer protein 1-like [Benincasa hispida])

HSP 1 Score: 166.4 bits (420), Expect = 1.8e-37
Identity = 84/119 (70.59%), Postives = 97/119 (81.51%), Query Frame = 0


Query: 1   MMSKLNTIVKLGLAITFLCAVIGGGVTTEAAVTCNQVVSGLSPCIQYVTGGGAPSSTCCY 60
           M S L   VKLGL ITFLC VIGG V TEA VTCNQV+S L+PC+Q+VTGGGAPS  CC 
Sbjct: 1   MASNLIGNVKLGLIITFLCTVIGGRVMTEAVVTCNQVISNLNPCVQFVTGGGAPSGNCCS 60

Query: 61  GVKQLNTVAQTTQVRQAVCQCLKSVVKEVKYNAQNVANAAALPAKCGVKLPYPINPNVD 120
           GV+QL  +AQTT  RQAVC+CLKSVV  V+Y+ +NVANAAALP+KCGV+LPY I+PNVD
Sbjct: 61  GVRQLFALAQTTPDRQAVCRCLKSVVNGVRYSGKNVANAAALPSKCGVQLPYAIDPNVD 119

[Close]

BLAST of CaUC04G072250 vs. NCBI nr
Match: XP_022966484.1 (non-specific lipid-transfer protein 1-like [Cucurbita maxima])

HSP 1 Score: 149.1 bits (375), Expect = 2.9e-32
Identity = 72/111 (64.86%), Postives = 87/111 (78.38%), Query Frame = 0


Query: 9   VKLGLAITFLCAVIGGGVTTEAAVTCNQVVSGLSPCIQYVTGGGAPSSTCCYGVKQLNTV 68
           VK+GL +  +C +I GG  +EAAVTCNQVVS L  C+ YVTGGGAPS+TCC GV+ LN +
Sbjct: 9   VKMGLVVALVCGIIMGGRVSEAAVTCNQVVSDLGACVSYVTGGGAPSATCCSGVQDLNKL 68

Query: 69  AQTTQVRQAVCQCLKSVVKEVKYNAQNVANAAALPAKCGVKLPYPINPNVD 120
           A T   RQAVC CL+S+VK V YNAQ +ANAAALPA+CGVKLPY I+P +D
Sbjct: 69  ASTAADRQAVCGCLESLVKGVSYNAQTLANAAALPARCGVKLPYKIDPRID 119

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BLAST of CaUC04G072250 vs. ExPASy Swiss-Prot
Match: Q43019 (Non-specific lipid-transfer protein 3 OS=Prunus dulcis OX=3755 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.4e-23
Identity = 53/118 (44.92%), Postives = 73/118 (61.86%), Query Frame = 0


Query: 2   MSKLNTIVKLGLAITFLCAVIGGGVTTEAAVTCNQVVSGLSPCIQYVTGGGAPSSTCCYG 61
           M+    ++KL   +  +C +  GG    AAV+C QVV+ L+PCI YV  GGA + +CC G
Sbjct: 1   MASSGQLLKLVCLVAVMCCMAVGGPKAMAAVSCGQVVNNLTPCINYVANGGALNPSCCTG 60

Query: 62  VKQLNTVAQTTQVRQAVCQCLKSVVKEVKYNAQNVANAAALPAKCGVKLPYPINPNVD 120
           V+ L ++AQTT  RQ++C CLK  V  + Y   N   AA LP KCGV +PY I+P+ D
Sbjct: 61  VRSLYSLAQTTADRQSICNCLKQAVNGIPYTNANAGLAAGLPGKCGVNIPYKISPSTD 118

[Close]

BLAST of CaUC04G072250 vs. ExPASy Swiss-Prot
Match: Q7XJ39 (Non-specific lipid-transfer protein 2A OS=Oryza sativa subsp. japonica OX=39947 GN=LTP2-A PE=3 SV=2)

HSP 1 Score: 100.5 bits (249), Expect = 1.6e-20
Identity = 47/107 (43.93%), Postives = 69/107 (64.49%), Query Frame = 0


Query: 13  LAITFLCAVIGGGVTTEAAVTCNQVVSGLSPCIQYVTGGGAPSSTCCYGVKQLNTVAQTT 72
           +A+     ++ G  TT AA++C QV S +SPC+ Y  GG  PS+ CC GV+ LN+ A TT
Sbjct: 9   VALVAAALLLAGPHTTMAAISCGQVNSAVSPCLSYARGGSGPSAACCSGVRSLNSAASTT 68

Query: 73  QVRQAVCQCLKSVVKEVKYNAQNVANAAALPAKCGVKLPYPINPNVD 120
             R+  C CLK+V   +  +  N  NAA++P+KCGV +PY I+P++D
Sbjct: 69  ADRRTACNCLKNVAGSI--SGLNAGNAASIPSKCGVSIPYTISPSID 113

[Close]

BLAST of CaUC04G072250 vs. ExPASy Swiss-Prot
Match: A2ZAT0 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=LTP2-A PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.6e-20
Identity = 47/107 (43.93%), Postives = 69/107 (64.49%), Query Frame = 0


Query: 13  LAITFLCAVIGGGVTTEAAVTCNQVVSGLSPCIQYVTGGGAPSSTCCYGVKQLNTVAQTT 72
           +A+     ++ G  TT AA++C QV S +SPC+ Y  GG  PS+ CC GV+ LN+ A TT
Sbjct: 9   VALVAAALLLAGPHTTMAAISCGQVNSAVSPCLSYARGGSGPSAACCSGVRSLNSAASTT 68

Query: 73  QVRQAVCQCLKSVVKEVKYNAQNVANAAALPAKCGVKLPYPINPNVD 120
             R+  C CLK+V   +  +  N  NAA++P+KCGV +PY I+P++D
Sbjct: 69  ADRRTACNCLKNVAGSI--SGLNAGNAASIPSKCGVSIPYTISPSID 113

[Close]

BLAST of CaUC04G072250 vs. ExPASy Swiss-Prot
Match: Q2QYL2 (Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica OX=39947 GN=LTP2-B PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 3.5e-20
Identity = 48/110 (43.64%), Postives = 69/110 (62.73%), Query Frame = 0


Query: 10  KLGLAITFLCAVIGGGVTTEAAVTCNQVVSGLSPCIQYVTGGGAPSSTCCYGVKQLNTVA 69
           +L L       ++ G  TT AA++C QV S +SPC+ Y  GG  PS+ CC GV+ LN+ A
Sbjct: 5   QLVLVALVAALLLAGPHTTMAAISCGQVNSAVSPCLSYARGGSGPSAACCSGVRSLNSAA 64

Query: 70  QTTQVRQAVCQCLKSVVKEVKYNAQNVANAAALPAKCGVKLPYPINPNVD 120
            TT  R+  C CLK+V   +  +  N  NAA++P+KCGV +PY I+P++D
Sbjct: 65  TTTADRRTACNCLKNVAGSI--SGLNAGNAASIPSKCGVSIPYTISPSID 112

[Close]

BLAST of CaUC04G072250 vs. ExPASy Swiss-Prot
Match: Q39950 (Non-specific lipid-transfer protein OS=Helianthus annuus OX=4232 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.0e-19
Identity = 51/106 (48.11%), Postives = 65/106 (61.32%), Query Frame = 0


Query: 19  CAVIGGGVTTEAAVTCNQVVSGLSPCIQYVTGGGAPSSTCCYGVKQLNTVAQTTQVRQAV 78
           C V+G   T   A++C QV S L+PCI Y+T GGA    CC GVK LN+ A+TT  RQA 
Sbjct: 15  CMVVGAPYT--EALSCGQVSSSLAPCISYLTKGGAVPPACCSGVKSLNSAAKTTPDRQAA 74

Query: 79  CQCLKSVVKEVKYNAQNVANAAALPAKCGVKLPYPINPNVDLLKCE 125
           C CLKS    +  +  N  NAA+ P KCGV +PY I+P+ D  K +
Sbjct: 75  CGCLKSAYNSI--SGVNAGNAASFPGKCGVSIPYKISPSTDCSKVQ 116

[Close]

BLAST of CaUC04G072250 vs. ExPASy TrEMBL
Match: A0A0A0KY77 (Non-specific lipid-transfer protein OS=Cucumis sativus OX=3659 GN=Csa_4G333620 PE=3 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.4e-40
Identity = 88/119 (73.95%), Postives = 98/119 (82.35%), Query Frame = 0


Query: 1   MMSKLNTIVKLGLAITFLCAVIGGGVTTEAAVTCNQVVSGLSPCIQYVTGGGAPSSTCCY 60
           M S L TI+KLGL +TFL AVIGGGVTTEA V+CNQV++ L PC+ YVTGGG PSS CC 
Sbjct: 1   MASNLITILKLGLTVTFLYAVIGGGVTTEAVVSCNQVITNLRPCVSYVTGGGYPSSNCCS 60

Query: 61  GVKQLNTVAQTTQVRQAVCQCLKSVVKEVKYNAQNVANAAALPAKCGVKLPYPINPNVD 120
           GVKQL+T A+TT  RQAVC+CLKS+V  VKYN QNVANAAALP KCGV LPY INPNVD
Sbjct: 61  GVKQLSTAARTTPDRQAVCRCLKSLVNGVKYNGQNVANAAALPTKCGVTLPYSINPNVD 119

[Close]

BLAST of CaUC04G072250 vs. ExPASy TrEMBL
Match: A0A5D3CEZ6 (Non-specific lipid-transfer protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold127G00580 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.7e-39
Identity = 87/119 (73.11%), Postives = 94/119 (78.99%), Query Frame = 0


Query: 1   MMSKLNTIVKLGLAITFLCAVIGGGVTTEAAVTCNQVVSGLSPCIQYVTGGGAPSSTCCY 60
           M S L TI+KLGL +T L AVIGGGVTTEA VTCNQVVS LSPCI YVTGGG+PS  CC 
Sbjct: 1   MASNLITILKLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCS 60

Query: 61  GVKQLNTVAQTTQVRQAVCQCLKSVVKEVKYNAQNVANAAALPAKCGVKLPYPINPNVD 120
           GV+QLN  AQTT  RQ VC+CLKS++  V YN QNVANAAALP KCGV LPY INPN D
Sbjct: 61  GVRQLNKAAQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNAD 119

[Close]

BLAST of CaUC04G072250 vs. ExPASy TrEMBL
Match: A0A1S3CIS8 (Non-specific lipid-transfer protein OS=Cucumis melo OX=3656 GN=LOC103501462 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.7e-39
Identity = 87/119 (73.11%), Postives = 94/119 (78.99%), Query Frame = 0


Query: 1   MMSKLNTIVKLGLAITFLCAVIGGGVTTEAAVTCNQVVSGLSPCIQYVTGGGAPSSTCCY 60
           M S L TI+KLGL +T L AVIGGGVTTEA VTCNQVVS LSPCI YVTGGG+PS  CC 
Sbjct: 1   MASNLITILKLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCS 60

Query: 61  GVKQLNTVAQTTQVRQAVCQCLKSVVKEVKYNAQNVANAAALPAKCGVKLPYPINPNVD 120
           GV+QLN  AQTT  RQ VC+CLKS++  V YN QNVANAAALP KCGV LPY INPN D
Sbjct: 61  GVRQLNKAAQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNAD 119

[Close]

BLAST of CaUC04G072250 vs. ExPASy TrEMBL
Match: A0A6J1HTX7 (Non-specific lipid-transfer protein OS=Cucurbita maxima OX=3661 GN=LOC111466126 PE=3 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 1.4e-32
Identity = 72/111 (64.86%), Postives = 87/111 (78.38%), Query Frame = 0


Query: 9   VKLGLAITFLCAVIGGGVTTEAAVTCNQVVSGLSPCIQYVTGGGAPSSTCCYGVKQLNTV 68
           VK+GL +  +C +I GG  +EAAVTCNQVVS L  C+ YVTGGGAPS+TCC GV+ LN +
Sbjct: 9   VKMGLVVALVCGIIMGGRVSEAAVTCNQVVSDLGACVSYVTGGGAPSATCCSGVQDLNKL 68

Query: 69  AQTTQVRQAVCQCLKSVVKEVKYNAQNVANAAALPAKCGVKLPYPINPNVD 120
           A T   RQAVC CL+S+VK V YNAQ +ANAAALPA+CGVKLPY I+P +D
Sbjct: 69  ASTAADRQAVCGCLESLVKGVSYNAQTLANAAALPARCGVKLPYKIDPRID 119

[Close]

BLAST of CaUC04G072250 vs. ExPASy TrEMBL
Match: A0A6J1EBM4 (Non-specific lipid-transfer protein OS=Cucurbita moschata OX=3662 GN=LOC111432531 PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 4.1e-32
Identity = 72/111 (64.86%), Postives = 85/111 (76.58%), Query Frame = 0


Query: 9   VKLGLAITFLCAVIGGGVTTEAAVTCNQVVSGLSPCIQYVTGGGAPSSTCCYGVKQLNTV 68
           VK+GL +  +C +I GG  +EAAVTCNQVVS L  C+ YVTGGG PS+TCC GV+ LN +
Sbjct: 9   VKMGLVVALVCGIIMGGRVSEAAVTCNQVVSDLGACVSYVTGGGTPSATCCSGVQDLNKL 68

Query: 69  AQTTQVRQAVCQCLKSVVKEVKYNAQNVANAAALPAKCGVKLPYPINPNVD 120
           A T   RQAVC CL+S+VK V YNAQ +ANAAALPAKCGVKLPY I+P  D
Sbjct: 69  ASTAADRQAVCGCLESLVKGVSYNAQTLANAAALPAKCGVKLPYKIDPRTD 119

[Close]

BLAST of CaUC04G072250 vs. TAIR 10
Match: AT5G01870.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 94.0 bits (232), Expect = 1.0e-19
Identity = 44/92 (47.83%), Postives = 63/92 (68.48%), Query Frame = 0


Query: 28  TEAAVTCNQVVSGLSPCIQYVTGGGAPSSTCCYGVKQLNTVAQTTQVRQAVCQCLKSVVK 87
           +EAA++CN V + L PC+ YV  GGA   +CC G++ L+  A +   +Q VC+C+KSVV 
Sbjct: 20  SEAAISCNAVQANLYPCVVYVVQGGAIPYSCCNGIRMLSKQATSASDKQGVCRCIKSVVG 79

Query: 88  EVKYNAQNVANAAALPAKCGVKLPYPINPNVD 120
            V Y++  +  AAALP KCGVKLPY I+P+ +
Sbjct: 80  RVSYSSIYLKKAAALPGKCGVKLPYKIDPSTN 111

[Close]

BLAST of CaUC04G072250 vs. TAIR 10
Match: AT3G08770.1 (lipid transfer protein 6 )

HSP 1 Score: 91.7 bits (226), Expect = 5.2e-19
Identity = 42/91 (46.15%), Postives = 60/91 (65.93%), Query Frame = 0


Query: 29  EAAVTCNQVVSGLSPCIQYVTGGGAPSSTCCYGVKQLNTVAQTTQVRQAVCQCLKSVVKE 88
           EAAV+CN V++ L PC+ YVT GG   + CC G+  L + AQT+  RQ VC+C+KS +  
Sbjct: 18  EAAVSCNTVIADLYPCLSYVTQGGPVPTLCCNGLTTLKSQAQTSVDRQGVCRCIKSAIGG 77

Query: 89  VKYNAQNVANAAALPAKCGVKLPYPINPNVD 120
           +  + + + NA  LP+KCGV LPY  +P+ D
Sbjct: 78  LTLSPRTIQNALELPSKCGVDLPYKFSPSTD 108

[Close]

BLAST of CaUC04G072250 vs. TAIR 10
Match: AT3G08770.2 (lipid transfer protein 6 )

HSP 1 Score: 91.7 bits (226), Expect = 5.2e-19
Identity = 42/91 (46.15%), Postives = 60/91 (65.93%), Query Frame = 0


Query: 29  EAAVTCNQVVSGLSPCIQYVTGGGAPSSTCCYGVKQLNTVAQTTQVRQAVCQCLKSVVKE 88
           EAAV+CN V++ L PC+ YVT GG   + CC G+  L + AQT+  RQ VC+C+KS +  
Sbjct: 18  EAAVSCNTVIADLYPCLSYVTQGGPVPTLCCNGLTTLKSQAQTSVDRQGVCRCIKSAIGG 77

Query: 89  VKYNAQNVANAAALPAKCGVKLPYPINPNVD 120
           +  + + + NA  LP+KCGV LPY  +P+ D
Sbjct: 78  LTLSPRTIQNALELPSKCGVDLPYKFSPSTD 108

[Close]

BLAST of CaUC04G072250 vs. TAIR 10
Match: AT5G59310.1 (lipid transfer protein 4 )

HSP 1 Score: 88.6 bits (218), Expect = 4.4e-18
Identity = 44/93 (47.31%), Postives = 60/93 (64.52%), Query Frame = 0


Query: 27  TTEAAVTCNQVVSGLSPCIQYVTGGGAPSSTCCYGVKQLNTVAQTTQVRQAVCQCLKSVV 86
           + +AA+TC  V S LSPC+ Y++ GG     CC GVK+LN +AQTT  RQ  C+CL+S  
Sbjct: 20  SVDAAITCGTVASSLSPCLGYLSKGGVVPPPCCAGVKKLNGMAQTTPDRQQACRCLQSAA 79

Query: 87  KEVKYNAQNVANAAALPAKCGVKLPYPINPNVD 120
           K V     N + A+ LP KCGV +PYPI+ + +
Sbjct: 80  KGV-----NPSLASGLPGKCGVSIPYPISTSTN 107

[Close]

BLAST of CaUC04G072250 vs. TAIR 10
Match: AT5G59320.1 (lipid transfer protein 3 )

HSP 1 Score: 81.6 bits (200), Expect = 5.4e-16
Identity = 41/101 (40.59%), Postives = 63/101 (62.38%), Query Frame = 0


Query: 17  FLCAVIGGGV--TTEAAVTCNQVVSGLSPCIQYVTGGGAPSSTCCYGVKQLNTVAQTTQV 76
           F C V+   +  + +AA++C  V   L+PC  Y++ GG    +CC GVK LN++A+TT  
Sbjct: 8   FTCLVLTVCIVASVDAAISCGTVAGSLAPCATYLSKGGLVPPSCCAGVKTLNSMAKTTPD 67

Query: 77  RQAVCQCLKSVVKEVKYNAQNVANAAALPAKCGVKLPYPIN 116
           RQ  C+C++S  K +  +  N + A+ LP KCGV +PYPI+
Sbjct: 68  RQQACRCIQSTAKSI--SGLNPSLASGLPGKCGVSIPYPIS 106

The following BLAST results are available for this feature:

BLAST of CaUC04G072250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004151695.1	2.9e-40	73.95	non-specific lipid-transfer protein 1 [Cucumis sativus] >KGN54448.1 hypothetical...	[more]
KAA0025399.1	5.5e-39	73.11	non-specific lipid-transfer protein 1-like [Cucumis melo var. makuwa] >TYK09774....	[more]
XP_008463259.1	5.5e-39	73.11	PREDICTED: non-specific lipid-transfer protein 1-like [Cucumis melo]	[more]
XP_038883886.1	1.8e-37	70.59	non-specific lipid-transfer protein 1-like [Benincasa hispida]	[more]
XP_022966484.1	2.9e-32	64.86	non-specific lipid-transfer protein 1-like [Cucurbita maxima]	[more]

BLAST of CaUC04G072250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q43019	3.4e-23	44.92	Non-specific lipid-transfer protein 3 OS=Prunus dulcis OX=3755 PE=2 SV=1	[more]
Q7XJ39	1.6e-20	43.93	Non-specific lipid-transfer protein 2A OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
A2ZAT0	1.6e-20	43.93	Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
Q2QYL2	3.5e-20	43.64	Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q39950	1.0e-19	48.11	Non-specific lipid-transfer protein OS=Helianthus annuus OX=4232 PE=3 SV=1	[more]

BLAST of CaUC04G072250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KY77	1.4e-40	73.95	Non-specific lipid-transfer protein OS=Cucumis sativus OX=3659 GN=Csa_4G333620 P...	[more]
A0A5D3CEZ6	2.7e-39	73.11	Non-specific lipid-transfer protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3CIS8	2.7e-39	73.11	Non-specific lipid-transfer protein OS=Cucumis melo OX=3656 GN=LOC103501462 PE=3...	[more]
A0A6J1HTX7	1.4e-32	64.86	Non-specific lipid-transfer protein OS=Cucurbita maxima OX=3661 GN=LOC111466126 ...	[more]
A0A6J1EBM4	4.1e-32	64.86	Non-specific lipid-transfer protein OS=Cucurbita moschata OX=3662 GN=LOC11143253...	[more]

BLAST of CaUC04G072250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01870.1	1.0e-19	47.83	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G08770.1	5.2e-19	46.15	lipid transfer protein 6	[more]
AT3G08770.2	5.2e-19	46.15	lipid transfer protein 6	[more]
AT5G59310.1	4.4e-18	47.31	lipid transfer protein 4	[more]
AT5G59320.1	5.4e-16	40.59	lipid transfer protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 135..140
None	No IPR available	PANTHER	PTHR33076:SF50	NON-SPECIFIC LIPID-TRANSFER PROTEIN 10-RELATED	coord: 8..119
None	No IPR available	CDD	cd01960	nsLTP1	coord: 32..119 e-value: 1.15712E-28 score: 98.5761
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 33..49 score: 47.6 coord: 74..89 score: 38.08 coord: 93..110 score: 42.22 coord: 111..122 score: 35.9 coord: 53..67 score: 45.54
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PANTHER	PTHR33076	FAMILY NOT NAMED	coord: 8..119
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 34..123 e-value: 1.2E-8 score: 44.7
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF00234	Tryp_alpha_amyl	coord: 34..112 e-value: 9.9E-9 score: 35.5
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 31..125 e-value: 1.1E-26 score: 95.0
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 32..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC04G072250.1	CaUC04G072250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
molecular_function	GO:0008289	lipid binding