CaUC03G064210 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC03G064210
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	RING-type E3 ubiquitin transferase
Location	Ciama_Chr03: 29532045 .. 29532578 (+)
RNA-Seq Expression	CaUC03G064210
Synteny	CaUC03G064210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGATTCTTCTTCAACCTCTTTTGCTCAGCCAACGCCTCATCCTGCAAAATCAAGCTTACCCATGTTGTATTATGGCCTTGTGGTCATCGGAACGGCGGCGATTGTGTTGGTTCTTTACAATTTCATCATTATCAAGTGGTGCTCTGACAACCGCCACCGCCGTGCTTCCCCGGCGTTGGCTGGAAGTTATGCAGAGATGATGAATTCAAGCCGTAGCTTCCAGAGCTCGTTGTGCAGCTTCAAATTCAAGAAGGGGTTCACGGCGGCGGCAGCGGCGGAAGAAAATGGGAATGGGAATGAATGTGCAGTTTGTTTGTCGGCGTTTGAGGATGGGGAAGAGGTTAAGAAACTGCCGAGATGCACACATATGTTTCATGCTTCTTGTATAGACATGTGGCTTTACTCTCACTCCGATTGCCCTCTCTGCCGCGCTCCGGTGGTGGCGCCGGGGCTGAGCCAACACCAAACCACGGCGGAGCAACAGGAGAATTCAGGGCATGGTTTGTTGGATTCCGGCGAGTTGGTTTGA

mRNA sequence

ATGAGTGATTCTTCTTCAACCTCTTTTGCTCAGCCAACGCCTCATCCTGCAAAATCAAGCTTACCCATGTTGTATTATGGCCTTGTGGTCATCGGAACGGCGGCGATTGTGTTGGTTCTTTACAATTTCATCATTATCAAGTGGTGCTCTGACAACCGCCACCGCCGTGCTTCCCCGGCGTTGGCTGGAAGTTATGCAGAGATGATGAATTCAAGCCGTAGCTTCCAGAGCTCGTTGTGCAGCTTCAAATTCAAGAAGGGGTTCACGGCGGCGGCAGCGGCGGAAGAAAATGGGAATGGGAATGAATGTGCAGTTTGTTTGTCGGCGTTTGAGGATGGGGAAGAGGTTAAGAAACTGCCGAGATGCACACATATGTTTCATGCTTCTTGTATAGACATGTGGCTTTACTCTCACTCCGATTGCCCTCTCTGCCGCGCTCCGGTGGTGGCGCCGGGGCTGAGCCAACACCAAACCACGGCGGAGCAACAGGAGAATTCAGGGCATGGTTTGTTGGATTCCGGCGAGTTGGTTTGA

Coding sequence (CDS)

ATGAGTGATTCTTCTTCAACCTCTTTTGCTCAGCCAACGCCTCATCCTGCAAAATCAAGCTTACCCATGTTGTATTATGGCCTTGTGGTCATCGGAACGGCGGCGATTGTGTTGGTTCTTTACAATTTCATCATTATCAAGTGGTGCTCTGACAACCGCCACCGCCGTGCTTCCCCGGCGTTGGCTGGAAGTTATGCAGAGATGATGAATTCAAGCCGTAGCTTCCAGAGCTCGTTGTGCAGCTTCAAATTCAAGAAGGGGTTCACGGCGGCGGCAGCGGCGGAAGAAAATGGGAATGGGAATGAATGTGCAGTTTGTTTGTCGGCGTTTGAGGATGGGGAAGAGGTTAAGAAACTGCCGAGATGCACACATATGTTTCATGCTTCTTGTATAGACATGTGGCTTTACTCTCACTCCGATTGCCCTCTCTGCCGCGCTCCGGTGGTGGCGCCGGGGCTGAGCCAACACCAAACCACGGCGGAGCAACAGGAGAATTCAGGGCATGGTTTGTTGGATTCCGGCGAGTTGGTTTGA

Protein sequence

MSDSSSTSFAQPTPHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIIIKWCSDNRHRRASPALAGSYAEMMNSSRSFQSSLCSFKFKKGFTAAAAAEENGNGNECAVCLSAFEDGEEVKKLPRCTHMFHASCIDMWLYSHSDCPLCRAPVVAPGLSQHQTTAEQQENSGHGLLDSGELV

Homology

[Close]

BLAST of CaUC03G064210 vs. NCBI nr
Match: XP_038879803.1 (RING-H2 finger protein ATL39-like [Benincasa hispida])

HSP 1 Score: 330.1 bits (845), Expect = 1.2e-86
Identity = 163/178 (91.57%), Postives = 170/178 (95.51%), Query Frame = 0


Query: 1   MSDSSSTSFAQPTPHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIIIKWCSDNRHRRASPA 60
           MSDSSSTSFAQPTPHPAKSSLPMLYYGLVV+GTAAIVLVLYNFI+IKWCSDNRHRRASPA
Sbjct: 1   MSDSSSTSFAQPTPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDNRHRRASPA 60

Query: 61  LAGSYAEMMNSSRSFQSSLCSFKFKKGFT-AAAAAEENGNGNECAVCLSAFEDGEEVKKL 120
           LAGSYAEMMNSSRSF SSLCSFKFKKG T AAAAAEE G GNECAVCLSAFEDG+EVKKL
Sbjct: 61  LAGSYAEMMNSSRSFHSSLCSFKFKKGSTVAAAAAEEEGYGNECAVCLSAFEDGDEVKKL 120

Query: 121 PRCTHMFHASCIDMWLYSHSDCPLCRAPVVAPGLSQHQTTAEQQENSGHGLLDSGELV 178
           PRCTHMFHASCIDMWL+SHSDCPLCRAPVVA GLSQHQ  AEQ+ENSGHGLL+SG+LV
Sbjct: 121 PRCTHMFHASCIDMWLFSHSDCPLCRAPVVAQGLSQHQAMAEQEENSGHGLLESGDLV 178

[Close]

BLAST of CaUC03G064210 vs. NCBI nr
Match: XP_022960602.1 (E3 ubiquitin-protein ligase EL5-like [Cucurbita moschata])

HSP 1 Score: 295.8 bits (756), Expect = 2.5e-76
Identity = 149/181 (82.32%), Postives = 156/181 (86.19%), Query Frame = 0


Query: 1   MSDSSSTSFAQPTPHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIIIKWCSDNRHRRASPA 60
           MSDS+S  FAQPT HPAKSSLPMLYYGLVVIGTAAIVLVLYNFI+I WCSDNR  RASPA
Sbjct: 1   MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPA 60

Query: 61  LAGSYAEMMNSSRSFQSS----LCSFKFKKGFTAAAAAEENGNGNECAVCLSAFEDGEEV 120
           LAGSYAEM+NSSRS QSS    LCSFKFKKG  AAAAAEE GNGNEC VCLSAFE+GEEV
Sbjct: 61  LAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAEEEGNGNECVVCLSAFEEGEEV 120

Query: 121 KKLPRCTHMFHASCIDMWLYSHSDCPLCRAPVVAPGLSQHQTTAEQQENSGHGLLDSGEL 178
           KKLPRC HMFHA CIDMWL+SH DCPLCRAPV  PGLS+ QT AEQQ NSGHGL +SG L
Sbjct: 121 KKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGL 180

[Close]

BLAST of CaUC03G064210 vs. NCBI nr
Match: KAG6590024.1 (RING-H2 finger protein ATL1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023686.1 RING-H2 finger protein ATL1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 290.8 bits (743), Expect = 7.9e-75
Identity = 149/183 (81.42%), Postives = 156/183 (85.25%), Query Frame = 0


Query: 1   MSDSSSTSFAQPTPHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIIIKWCSDNRHRRASPA 60
           MSDS+S  FAQPT HPAKSSLPMLYYGLVVIGTAAIVLVLYNFI+I WCSDNR  RASPA
Sbjct: 1   MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPA 60

Query: 61  LAGSYAEMMNSSRSFQSS----LCSFKFKKGFTAA--AAAEENGNGNECAVCLSAFEDGE 120
           LAGSYAEM+NSSRS QSS    LCSFKFKKG  AA  AAAEE GNGNEC VCLSAFE+GE
Sbjct: 61  LAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAATAAAEEEGNGNECVVCLSAFEEGE 120

Query: 121 EVKKLPRCTHMFHASCIDMWLYSHSDCPLCRAPVVAPGLSQHQTTAEQQENSGHGLLDSG 178
           EVKKLPRC HMFHA CIDMWL+SH DCPLCRAPV  PGLS+ QT AEQQ NSGHGL +SG
Sbjct: 121 EVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESG 180

[Close]

BLAST of CaUC03G064210 vs. NCBI nr
Match: XP_022987479.1 (E3 ubiquitin-protein ligase EL5-like [Cucurbita maxima])

HSP 1 Score: 289.7 bits (740), Expect = 1.8e-74
Identity = 147/181 (81.22%), Postives = 156/181 (86.19%), Query Frame = 0


Query: 1   MSDSSSTSFAQPTPHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIIIKWCSDNRHRRASPA 60
           MSDS+S  F+QPT HPAKSSLPMLYYGLVVIGTAAIVLVLYNFI+I WCSDNR  RASPA
Sbjct: 1   MSDSASNHFSQPTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPA 60

Query: 61  LAGSYAEMMNSSRSFQSS----LCSFKFKKGFTAAAAAEENGNGNECAVCLSAFEDGEEV 120
           LAGSYAEM+NSSRS QSS    LCSFKFKKG +AAAA EE GNGNEC VCLSAFE+GEEV
Sbjct: 61  LAGSYAEMVNSSRSLQSSNRNLLCSFKFKKG-SAAAAVEEEGNGNECVVCLSAFEEGEEV 120

Query: 121 KKLPRCTHMFHASCIDMWLYSHSDCPLCRAPVVAPGLSQHQTTAEQQENSGHGLLDSGEL 178
           KKLPRC HMFHA CIDMWL+SH DCPLCRAPV  PGLS+ QT AEQQ NSGHGL +SG L
Sbjct: 121 KKLPRCLHMFHARCIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGL 180

[Close]

BLAST of CaUC03G064210 vs. NCBI nr
Match: XP_023516728.1 (E3 ubiquitin-protein ligase EL5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 288.9 bits (738), Expect = 3.0e-74
Identity = 148/184 (80.43%), Postives = 156/184 (84.78%), Query Frame = 0


Query: 1   MSDSSSTSFAQPTPHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIIIKWCSDNRHRRASPA 60
           MSDS+S  FAQPT HPAKSSLPMLYYGLVVIGTAAIVLVLYNFI+I WCSDNR  RASPA
Sbjct: 1   MSDSASNYFAQPTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPA 60

Query: 61  LAGSYAEMMNSSRSFQSS----LCSFKFKKGFTAAAAA---EENGNGNECAVCLSAFEDG 120
           LAG+YAEM+NSSRS QSS    LCSFKFKKG  AAAAA   EE GNGNEC VCLSAFE+G
Sbjct: 61  LAGNYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAAVVEEEGNGNECVVCLSAFEEG 120

Query: 121 EEVKKLPRCTHMFHASCIDMWLYSHSDCPLCRAPVVAPGLSQHQTTAEQQENSGHGLLDS 178
           EEVKKLPRC HMFHA CIDMWL+SH DCPLCRAPV  PGLS+ QT AEQQ NSGHGL +S
Sbjct: 121 EEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRAPVAVPGLSKRQTVAEQQGNSGHGLPES 180

[Close]

BLAST of CaUC03G064210 vs. ExPASy Swiss-Prot
Match: Q9LRB7 (E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica OX=39947 GN=EL5.1 PE=1 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.5e-17
Identity = 62/172 (36.05%), Postives = 78/172 (45.35%), Query Frame = 0


Query: 1   MSDSSSTSFAQPTPHPAKSSLPMLYYGLVVIGTAAIVLVLYN--FIIIKWCSDNRHRRAS 60
           M +SSS+S   P   PA     M   G+  +    IV       F++++   D R R  +
Sbjct: 12  MDESSSSSSPSPVSAPA-GQAAMTAGGIATVAAVLIVFAALTLAFVLLQCYCDERRRAVT 71

Query: 61  PALAGSYAEMMNSSRSFQS----------------SLCSFKFKKGFTAAAA---AEENGN 120
                         R   S                SL    + +   AAAA    EE+ +
Sbjct: 72  TTSTSGRGRRPRPRRRSGSGGDGGTGGGVDPEVLRSLPVTVYSRSTAAAAAKEEEEEDDD 131

Query: 121 GNECAVCLSAFEDGEEVKKLPRCTHMFHASCIDMWLYSHSDCPLCRAPVVAP 152
           G ECAVCL+  EDGEE + LPRC H FHA C+DMWL SHS CPLCR  VV P
Sbjct: 132 GVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTVVVP 182

[Close]

BLAST of CaUC03G064210 vs. ExPASy Swiss-Prot
Match: P93823 (RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.3e-16
Identity = 59/180 (32.78%), Postives = 91/180 (50.56%), Query Frame = 0


Query: 6   STSFAQPT-PHPAKS--SLPMLYYGLVVIGTAAIVLVLYNFIIIKWCSD-------NRHR 65
           ST+F  P  P  + S  + P+L   ++ I   A +LV Y   +IK C +        R R
Sbjct: 23  STTFTSPIFPRTSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQIDIFRRRR 82

Query: 66  RAS---PALAGSYAEMMNS-SRSFQSSLCSFKFKKGFTAAAAAEENGNGNECAVCLSAFE 125
           R+S   P +  S  E+      S   ++  FKFKK    A   +++ N  EC+VCL+ F+
Sbjct: 83  RSSDQNPLMIYSPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQ 142

Query: 126 DGEEVKKLPRCTHMFHASCIDMWLYSHSDCPLCRAPVVAPG---LSQHQTTAEQQENSGH 169
           + E+++ +P C H+FH  CID+WL  +++CPLCR  V       L      +  +ENS H
Sbjct: 143 EDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLISAPSSPRENSPH 202

[Close]

BLAST of CaUC03G064210 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.0e-16
Identity = 64/185 (34.59%), Postives = 89/185 (48.11%), Query Frame = 0


Query: 3   DSSSTSFAQPTPHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIIIKWCSDNRHRRASPAL- 62
           DSSS+S          SS   L   L+ I T+A++LV Y  +I K+C  +    +S  L 
Sbjct: 46  DSSSSS----------SSFSPLLIALIGILTSALILVSYYTLISKYCHRHHQTSSSETLN 105

Query: 63  -----AGSYAEMMNSS-------RSFQSSLCSFKFKKGFTAAAAAEENGNGNECAVCLSA 122
                 G ++     S        S   S+  +K+K G       +   +G++C+VCLS 
Sbjct: 106 LNHNGEGFFSSTQRISTNGDGLNESMIKSITVYKYKSG-------DGFVDGSDCSVCLSE 165

Query: 123 FEDGEEVKKLPRCTHMFHASCIDMWLYSHSDCPLCRAPVVA---PGLSQHQTTA---EQQ 169
           FE+ E ++ LP+C H FH  CID WL SHS+CPLCRA V     P  S  Q  +     Q
Sbjct: 166 FEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFVTGVNNPTASVGQNVSVVVANQ 213

[Close]

BLAST of CaUC03G064210 vs. ExPASy Swiss-Prot
Match: Q9LSW9 (RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.5e-15
Identity = 57/170 (33.53%), Postives = 81/170 (47.65%), Query Frame = 0


Query: 8   SFAQPTPHP-------AKSSLPMLYYGLVVIGTAAIVLVLYNFIIIKWC----------- 67
           SF  P P P         +S P+L   ++ I   A +LV Y   +IK C           
Sbjct: 14  SFPPPPPPPIFHRASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGR 73

Query: 68  -SDNRHRRASPALAGSYAEMMNS---SRSFQSSLCSFKFKKG-------FTAAAAAEENG 127
            S +R RR        Y+  + S     S   ++  FKFKK        FT     EE  
Sbjct: 74  FSLSRRRRNDQDPLMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEK 133

Query: 128 NGNECAVCLSAFEDGEEVKKLPRCTHMFHASCIDMWLYSHSDCPLCRAPV 149
              EC+VCLS F+D E+++ +P C+H+FH  CID+WL ++++CPLCR  V
Sbjct: 134 RSQECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRV 183

[Close]

BLAST of CaUC03G064210 vs. ExPASy Swiss-Prot
Match: Q9LX93 (E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana OX=3702 GN=ATL55 PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.2e-14
Identity = 53/169 (31.36%), Postives = 77/169 (45.56%), Query Frame = 0


Query: 12  PTPHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIIIKWCSDNRHRRASPALAGSYAE---- 71
           P P P +    +L   + V+G+  + L L  F+ +      R   AS     +  +    
Sbjct: 30  PPPPPPRELSLLLPTSICVVGSIILFLFLVFFLYLHITQQRRISAASVTPGDTNQQEDED 89

Query: 72  -----------------MMNSSRSFQSSLCSFKFKKGFTAAAAAEENGNGNECAVCLSAF 131
                             +   RS  +S+    FKKG       E   +G EC+VCL+ F
Sbjct: 90  ETEERDFSDFHHVWQIPTVGLHRSAINSITVVGFKKG-------EGIIDGTECSVCLNEF 149

Query: 132 EDGEEVKKLPRCTHMFHASCIDMWLYSHSDCPLCRAPVVAPGLSQHQTT 160
           E+ E ++ LP+C+H FH +CID WL SH +CPLCRAPV+      HQ T
Sbjct: 150 EEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVLLITEPPHQET 191

[Close]

BLAST of CaUC03G064210 vs. ExPASy TrEMBL
Match: A0A6J1H7W2 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111461337 PE=3 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.2e-76
Identity = 149/181 (82.32%), Postives = 156/181 (86.19%), Query Frame = 0


Query: 1   MSDSSSTSFAQPTPHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIIIKWCSDNRHRRASPA 60
           MSDS+S  FAQPT HPAKSSLPMLYYGLVVIGTAAIVLVLYNFI+I WCSDNR  RASPA
Sbjct: 1   MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPA 60

Query: 61  LAGSYAEMMNSSRSFQSS----LCSFKFKKGFTAAAAAEENGNGNECAVCLSAFEDGEEV 120
           LAGSYAEM+NSSRS QSS    LCSFKFKKG  AAAAAEE GNGNEC VCLSAFE+GEEV
Sbjct: 61  LAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAEEEGNGNECVVCLSAFEEGEEV 120

Query: 121 KKLPRCTHMFHASCIDMWLYSHSDCPLCRAPVVAPGLSQHQTTAEQQENSGHGLLDSGEL 178
           KKLPRC HMFHA CIDMWL+SH DCPLCRAPV  PGLS+ QT AEQQ NSGHGL +SG L
Sbjct: 121 KKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGL 180

[Close]

BLAST of CaUC03G064210 vs. ExPASy TrEMBL
Match: A0A6J1JJ05 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111485020 PE=3 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 8.5e-75
Identity = 147/181 (81.22%), Postives = 156/181 (86.19%), Query Frame = 0


Query: 1   MSDSSSTSFAQPTPHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIIIKWCSDNRHRRASPA 60
           MSDS+S  F+QPT HPAKSSLPMLYYGLVVIGTAAIVLVLYNFI+I WCSDNR  RASPA
Sbjct: 1   MSDSASNHFSQPTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPA 60

Query: 61  LAGSYAEMMNSSRSFQSS----LCSFKFKKGFTAAAAAEENGNGNECAVCLSAFEDGEEV 120
           LAGSYAEM+NSSRS QSS    LCSFKFKKG +AAAA EE GNGNEC VCLSAFE+GEEV
Sbjct: 61  LAGSYAEMVNSSRSLQSSNRNLLCSFKFKKG-SAAAAVEEEGNGNECVVCLSAFEEGEEV 120

Query: 121 KKLPRCTHMFHASCIDMWLYSHSDCPLCRAPVVAPGLSQHQTTAEQQENSGHGLLDSGEL 178
           KKLPRC HMFHA CIDMWL+SH DCPLCRAPV  PGLS+ QT AEQQ NSGHGL +SG L
Sbjct: 121 KKLPRCLHMFHARCIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGL 180

[Close]

BLAST of CaUC03G064210 vs. ExPASy TrEMBL
Match: A0A6J1HZG2 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111467629 PE=3 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 3.9e-72
Identity = 148/186 (79.57%), Postives = 153/186 (82.26%), Query Frame = 0


Query: 1   MSDSSSTSFAQPTPHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIIIKWCSDNRHRRASPA 60
           M DS+ST  AQPT HPAKSSLPMLYYGLVVIGTA IVLVLYN IIIKWCSDN H +ASPA
Sbjct: 1   MGDSASTFIAQPTSHPAKSSLPMLYYGLVVIGTATIVLVLYNLIIIKWCSDNSHGQASPA 60

Query: 61  LAGSYAEMMNSSRSFQSS----LCSFKFKKGFTAAAAA--EENGNGNECAVCLSAFEDGE 120
           LAGSYAEM+NSSRSFQSS    L SFKFKKG TA A A  EE G GNECAVCLSAFEDGE
Sbjct: 61  LAGSYAEMVNSSRSFQSSNRNLLSSFKFKKGSTAKATATIEEEGIGNECAVCLSAFEDGE 120

Query: 121 EVKKLPRCTHMFHASCIDMWLYSHSDCPLCRAPVVAPGLSQHQT---TAEQQENSGHGLL 178
           EVKKLPRCTHMFHA CIDMWLYSHSDCPLCRAP +AP L Q  T    AEQQ NSGHGLL
Sbjct: 121 EVKKLPRCTHMFHAPCIDMWLYSHSDCPLCRAPAMAPALCQRHTAEDAAEQQVNSGHGLL 180

[Close]

BLAST of CaUC03G064210 vs. ExPASy TrEMBL
Match: A0A6J1D0Z7 (RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC111016600 PE=3 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 7.4e-71
Identity = 146/182 (80.22%), Postives = 155/182 (85.16%), Query Frame = 0


Query: 2   SDSSSTSFAQPTPHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIIIKWCSDNRHRRASPAL 61
           S SSST F QPTPHPAKSSLPMLYYGLVV+GTAAIVLV+YNFI+I+WCSD R  R SP +
Sbjct: 4   SYSSSTPFTQPTPHPAKSSLPMLYYGLVVVGTAAIVLVVYNFIVIRWCSD-RRGRGSPGM 63

Query: 62  AGSYAEMMNSSRSFQSS----LCSFKFKKGFTAAAA-AEENGNGNECAVCLSAFEDGEEV 121
           A SYAEMM+SS SFQSS    L SF+FKKG  AAAA AEE GNG ECAVCLSAFEDGEEV
Sbjct: 64  ARSYAEMMSSSGSFQSSSRNLLSSFRFKKGTKAAAATAEEEGNGLECAVCLSAFEDGEEV 123

Query: 122 KKLPRCTHMFHASCIDMWLYSHSDCPLCRAPV-VAPGLSQHQTTAEQQENSGHGLLDSGE 178
           KKLPRCTHMFHA CIDMWLYSHSDCPLCRAPV +APGL QH T AEQ ENSGHGLL+SG 
Sbjct: 124 KKLPRCTHMFHAPCIDMWLYSHSDCPLCRAPVALAPGLCQHHTAAEQPENSGHGLLESGG 183

[Close]

BLAST of CaUC03G064210 vs. ExPASy TrEMBL
Match: A0A5A7UKT6 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001780 PE=3 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 5.9e-68
Identity = 139/173 (80.35%), Postives = 149/173 (86.13%), Query Frame = 0


Query: 1   MSDSSSTSFAQPTPHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIIIKWCSDNRHRRASPA 60
           MSDSS++     TPHPAKSSLPMLYYGLVV+GTAAIVLVLYNFI+IKWCSD+RHRR    
Sbjct: 1   MSDSSTS-----TPHPAKSSLPMLYYGLVVVGTAAIVLVLYNFIVIKWCSDSRHRR---R 60

Query: 61  LAGSYAEMMNSSRSFQSSLCSFKFKKGFTAAAAAEENGNGNECAVCLSAFEDGEEVKKLP 120
           +A SY EMMNSSRSFQSSL SFKFKK   A A AEE GNGNECAVCLSAFEDGEEVKKLP
Sbjct: 61  MAVSYEEMMNSSRSFQSSLSSFKFKKVAAATATAEE-GNGNECAVCLSAFEDGEEVKKLP 120

Query: 121 RCTHMFHASCIDMWLYSHSDCPLCRAPVVAPGLSQHQ-TTAEQQENSGHGLLD 173
           RCTH FHASCIDMWLYSHSDCPLCRAPV  PG+S+H+ TTAEQ ENSGH LL+
Sbjct: 121 RCTHTFHASCIDMWLYSHSDCPLCRAPVAVPGVSRHETTTAEQDENSGHVLLE 164

[Close]

BLAST of CaUC03G064210 vs. TAIR 10
Match: AT1G04360.1 (RING/U-box superfamily protein )

HSP 1 Score: 87.0 bits (214), Expect = 1.6e-17
Identity = 59/180 (32.78%), Postives = 91/180 (50.56%), Query Frame = 0


Query: 6   STSFAQPT-PHPAKS--SLPMLYYGLVVIGTAAIVLVLYNFIIIKWCSD-------NRHR 65
           ST+F  P  P  + S  + P+L   ++ I   A +LV Y   +IK C +        R R
Sbjct: 23  STTFTSPIFPRTSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQIDIFRRRR 82

Query: 66  RAS---PALAGSYAEMMNS-SRSFQSSLCSFKFKKGFTAAAAAEENGNGNECAVCLSAFE 125
           R+S   P +  S  E+      S   ++  FKFKK    A   +++ N  EC+VCL+ F+
Sbjct: 83  RSSDQNPLMIYSPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQ 142

Query: 126 DGEEVKKLPRCTHMFHASCIDMWLYSHSDCPLCRAPVVAPG---LSQHQTTAEQQENSGH 169
           + E+++ +P C H+FH  CID+WL  +++CPLCR  V       L      +  +ENS H
Sbjct: 143 EDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLISAPSSPRENSPH 202

[Close]

BLAST of CaUC03G064210 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 86.7 bits (213), Expect = 2.1e-17
Identity = 64/185 (34.59%), Postives = 89/185 (48.11%), Query Frame = 0


Query: 3   DSSSTSFAQPTPHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIIIKWCSDNRHRRASPAL- 62
           DSSS+S          SS   L   L+ I T+A++LV Y  +I K+C  +    +S  L 
Sbjct: 46  DSSSSS----------SSFSPLLIALIGILTSALILVSYYTLISKYCHRHHQTSSSETLN 105

Query: 63  -----AGSYAEMMNSS-------RSFQSSLCSFKFKKGFTAAAAAEENGNGNECAVCLSA 122
                 G ++     S        S   S+  +K+K G       +   +G++C+VCLS 
Sbjct: 106 LNHNGEGFFSSTQRISTNGDGLNESMIKSITVYKYKSG-------DGFVDGSDCSVCLSE 165

Query: 123 FEDGEEVKKLPRCTHMFHASCIDMWLYSHSDCPLCRAPVVA---PGLSQHQTTA---EQQ 169
           FE+ E ++ LP+C H FH  CID WL SHS+CPLCRA V     P  S  Q  +     Q
Sbjct: 166 FEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFVTGVNNPTASVGQNVSVVVANQ 213

[Close]

BLAST of CaUC03G064210 vs. TAIR 10
Match: AT5G43420.1 (RING/U-box superfamily protein )

HSP 1 Score: 84.3 bits (207), Expect = 1.0e-16
Identity = 57/170 (33.53%), Postives = 81/170 (47.65%), Query Frame = 0


Query: 8   SFAQPTPHP-------AKSSLPMLYYGLVVIGTAAIVLVLYNFIIIKWC----------- 67
           SF  P P P         +S P+L   ++ I   A +LV Y   +IK C           
Sbjct: 14  SFPPPPPPPIFHRASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGR 73

Query: 68  -SDNRHRRASPALAGSYAEMMNS---SRSFQSSLCSFKFKKG-------FTAAAAAEENG 127
            S +R RR        Y+  + S     S   ++  FKFKK        FT     EE  
Sbjct: 74  FSLSRRRRNDQDPLMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEK 133

Query: 128 NGNECAVCLSAFEDGEEVKKLPRCTHMFHASCIDMWLYSHSDCPLCRAPV 149
              EC+VCLS F+D E+++ +P C+H+FH  CID+WL ++++CPLCR  V
Sbjct: 134 RSQECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRV 183

[Close]

BLAST of CaUC03G064210 vs. TAIR 10
Match: AT5G10380.1 (RING/U-box superfamily protein )

HSP 1 Score: 81.3 bits (199), Expect = 8.8e-16
Identity = 53/169 (31.36%), Postives = 77/169 (45.56%), Query Frame = 0


Query: 12  PTPHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIIIKWCSDNRHRRASPALAGSYAE---- 71
           P P P +    +L   + V+G+  + L L  F+ +      R   AS     +  +    
Sbjct: 30  PPPPPPRELSLLLPTSICVVGSIILFLFLVFFLYLHITQQRRISAASVTPGDTNQQEDED 89

Query: 72  -----------------MMNSSRSFQSSLCSFKFKKGFTAAAAAEENGNGNECAVCLSAF 131
                             +   RS  +S+    FKKG       E   +G EC+VCL+ F
Sbjct: 90  ETEERDFSDFHHVWQIPTVGLHRSAINSITVVGFKKG-------EGIIDGTECSVCLNEF 149

Query: 132 EDGEEVKKLPRCTHMFHASCIDMWLYSHSDCPLCRAPVVAPGLSQHQTT 160
           E+ E ++ LP+C+H FH +CID WL SH +CPLCRAPV+      HQ T
Sbjct: 150 EEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVLLITEPPHQET 191

[Close]

BLAST of CaUC03G064210 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein )

HSP 1 Score: 79.3 bits (194), Expect = 3.4e-15
Identity = 54/189 (28.57%), Postives = 84/189 (44.44%), Query Frame = 0


Query: 17  AKSSLPMLYYGLVVIGTAAIVLVLYNFIIIKWCSDNRHRRASPALA------------GS 76
           + S    L   L+ I  +A +LV Y  +I K+C   RH  +S + A            G+
Sbjct: 52  SSSDFSPLLIALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGT 111

Query: 77  YAEMMNSS----------------RSFQSSLCSFKFKK--GFTAAAAAEENGNGNECAVC 136
                N +                 S   S+  +K++K  GF            ++C+VC
Sbjct: 112 NNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFV---------ESSDCSVC 171

Query: 137 LSAFEDGEEVKKLPRCTHMFHASCIDMWLYSHSDCPLCRAPVVAPGLSQHQTTAEQQENS 176
           LS F++ E ++ LP+C H FH  CID WL SHS+CPLCRA +V     +      QQ  +
Sbjct: 172 LSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDLTNQQIVT 231

The following BLAST results are available for this feature:

BLAST of CaUC03G064210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879803.1	1.2e-86	91.57	RING-H2 finger protein ATL39-like [Benincasa hispida]	[more]
XP_022960602.1	2.5e-76	82.32	E3 ubiquitin-protein ligase EL5-like [Cucurbita moschata]	[more]
KAG6590024.1	7.9e-75	81.42	RING-H2 finger protein ATL1, partial [Cucurbita argyrosperma subsp. sororia] >KA...	[more]
XP_022987479.1	1.8e-74	81.22	E3 ubiquitin-protein ligase EL5-like [Cucurbita maxima]	[more]
XP_023516728.1	3.0e-74	80.43	E3 ubiquitin-protein ligase EL5-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CaUC03G064210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LRB7	3.5e-17	36.05	E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica OX=39947 GN=EL5....	[more]
P93823	2.3e-16	32.78	RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1	[more]
Q9LF64	3.0e-16	34.59	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
Q9LSW9	1.5e-15	33.53	RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1	[more]
Q9LX93	1.2e-14	31.36	E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana OX=3702 GN=ATL55 PE=1 ...	[more]

BLAST of CaUC03G064210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H7W2	1.2e-76	82.32	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111461337...	[more]
A0A6J1JJ05	8.5e-75	81.22	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111485020 P...	[more]
A0A6J1HZG2	3.9e-72	79.57	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111467629 P...	[more]
A0A6J1D0Z7	7.4e-71	80.22	RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC11101660...	[more]
A0A5A7UKT6	5.9e-68	80.35	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]

BLAST of CaUC03G064210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04360.1	1.6e-17	32.78	RING/U-box superfamily protein	[more]
AT5G17600.1	2.1e-17	34.59	RING/U-box superfamily protein	[more]
AT5G43420.1	1.0e-16	33.53	RING/U-box superfamily protein	[more]
AT5G10380.1	8.8e-16	31.36	RING/U-box superfamily protein	[more]
AT3G03550.1	3.4e-15	28.57	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 103..144 e-value: 5.0E-6 score: 36.0
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 101..145 e-value: 1.4E-13 score: 51.0
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 103..145 score: 12.223724
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 63..150 e-value: 4.7E-21 score: 76.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..177
None	No IPR available	PANTHER	PTHR45676:SF84	RING-H2 FINGER PROTEIN ATL52-LIKE	coord: 6..172
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 88..151
IPR044675	E3 ubiquitin-protein ligase RING1-like	PANTHER	PTHR45676	RING-H2 FINGER PROTEIN ATL51-RELATED	coord: 6..172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC03G064210.1	CaUC03G064210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane