CaUC03G059450 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC03G059450
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Zinc finger protein JAGGED
Location	Ciama_Chr03: 13697471 .. 13699706 (-)
RNA-Seq Expression	CaUC03G059450
Synteny	CaUC03G059450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGGTGTGATGTGTCCTGGAGTAACTAAAAACAAAGGCAAAAACGTCCTTCTCAACCAAACGAGACCAGATTTTGCATATAATAACCCTAAACCCTTTGATTTCTTCCCTTTTAAAGTCACGAGAGGCTTCCTGTTGTCTCTTTGTTGTTGTTTCAAGAGAGAGAGAGAGAGAGTGGCAGATGAACTGATAGAGAACTTTCAAAGCTCTTTTTCTTCAACACCCCATTACTCAACTACCATCTTTCTCAAACTCCAAGTCTTCTTTTTATTATTATTATAATTAATTTTCTAATACTCTCCCTACTTCCTCATCTCCCACCATACTCTCTCTTTCTGTCTGTTTCATCATGTAATTAACTCATCCCCACACACAAAAAGAAAAAAACAAACCCTCTTCTTTTTTAGTTTAATTAATTAGTATATGTATGTTTTGAAATAACTGATGTTGTTTAATTTGTTGGTTTGCAGGCGATCCGAGGGGAGCCCTTTGGACCTCAACAACTTACCTGAAGATTATATCAGAGATGGGAAACAGATTATTGAAGATAGCTCTAGTGGTAAACTAAATAAAAGTATTAATGATGATTTGGGAGTTAATAAAATGGTGGGAAGAGAGTTGAGTAAAATGGTCAGTACTGTGTTGTTTGCAGGTCATCGGAAAAAGAAAAGTGGGTTGAAGGAGGGAAAAGAGGAGTCCGGAAAAGTGTATGAATGCAGGTTTTGTTCACTCAAGTTTTGCAAATCCCAGGCTCTTGGTGGCCACATGAACCGCCACCGCCAAGGCAAAATTACTACTCTTTTATTTATTTATTTATTTATTTATTATTATTATTTTAATGAATGATTAGTCATGTCATGGAGGAGAGAGTTTTGGGGGTATTTTGTTTTGTTTTTGTTTTATGGGTGAATTATTATTAGTTAGAGCAGCAGATTTGTTTGTGTGTGATTTGATTTTTGACTTCATTTGTGTTTGGTTTTTGGTCAGAGAGAGAGACAGAGACACTGAATCGAGCTCGTCAGCTTGTTTTCAGTAACGATAACCTCGCCGCCCAACCACCACCTCCTCCTCCTCCTCATTTAGGGTATTCATCTCTCTCTCTTCTTTCTCACCTTCCATTCTTAAACTTCTCATCTTTTAATTCTTTATTTAATCCCCAATTCAACCTACTTACATTTTCCTACCTATTGTATATACCCCCAGAAAAAAAAACTTTTAAATTTTACCTATATAAAACATAAACTAAAAGAGTGAGAGAAGGTACATCTCACAATGGCATAGATTTCCTTTTTTTTATTTTAATAACATGTAGGATTGGAAAATCCAATCTCTAAACTCTGGATGATAACAAGAACACTATATTAATTGAGTTATGCTCGTTTTGACTAAAAGATACATGGATTCCATGGTGGCTTCTCTTATTATCAGTTAATTTTATGATATTTATCTAATTCCACCTATTTTCAAATCTAACCAACTATTAAGCAATATTTGGAAAGATTAAAAAAATTTGCAACATGTTTTACGGTAATAAAATAGTTTTTCTCTAATTTTCCTCTTTTAATTTCTAGATTTGAAAGATTACACGTCCCTATAAAATTTGTGTTTTTTTGGGTGATTAGGTGCTGCCATTCAATGGCACCGGCGAACTACCACACCGCGGGCGGCAGCAGCGGCGTAGGAAGTGATTCAACCCTGCCTCTTAGATTTCCAACGAGAATGTTCTCCGGGTCCTCCCCAAGCACCCTTTTGCCGCAGCCGCCGCCACCACCACTACCTCCGTCACACCAGCCATATCTATACAGCTCGCCATCACGGCCTTCGAGTTTCCCTTCCTACTATCCTCCACAAGCCACTATCAACGACTACTACGTGGGGCATGTCTTGGGGAACCCTTCACAGTGCAGCCATCAGACAGTGAACTACGGTTCCGGCTCGGTGGAGTCGAGTAGCTACACTTGTATCGGAGCTCCGGTAGGGCATGGGGCGGCGTTTGGTGGACGAGATGGCGGTGGCAGTGGCGGTAGAGACGGATCGCAGCAGCAGCAGCGTTTGGACGTTCCTTCTTCGATCAATCGGTTTCAAGATGGATTCTAAAAAGAAGATTAGAATATTTTTTGTTTTAAAATTTTTCTGAGTAATGTTATTGAAATTCTGCAATGACACGCCACCCAGAGAAAGAGAGAGACATAACAAGCTGACAAATGGGGTCATAAATCATAATACAAGGGAA

mRNA sequence

ATGGTTGGTGTGATGTGTCCTGGAGTAACTAAAAACAAAGGCAAAAACGTCCTTCTCAACCAAACGAGACCAGATTTTGCATATAATAACCCTAAACCCTTTGATTTCTTCCCTTTTAAAGTCACGAGAGGCTTCCTGTTGCGATCCGAGGGGAGCCCTTTGGACCTCAACAACTTACCTGAAGATTATATCAGAGATGGGAAACAGATTATTGAAGATAGCTCTAGTGAGAGAGAGACAGAGACACTGAATCGAGCTCGTCAGCTTGTTTTCAGTAACGATAACCTCGCCGCCCAACCACCACCTCCTCCTCCTCCTCATTTAGGGTGCTGCCATTCAATGGCACCGGCGAACTACCACACCGCGGGCGGCAGCAGCGGCGTAGGAAGTGATTCAACCCTGCCTCTTAGATTTCCAACGAGAATGTTCTCCGGGTCCTCCCCAAGCACCCTTTTGCCGCAGCCGCCGCCACCACCACTACCTCCGTCACACCAGCCATATCTATACAGCTCGCCATCACGGCCTTCGAGTTTCCCTTCCTACTATCCTCCACAAGCCACTATCAACGACTACTACGTGGGGCATGTCTTGGGGAACCCTTCACAGTGCAGCCATCAGACAGTGAACTACGGTTCCGGCTCGGTGGAGTCGAGTAGCTACACTTGTATCGGAGCTCCGGTAGGGCATGGGGCGGCGTTTGGTGGACGAGATGGCGGTGGCAGTGGCGGTAGAGACGGATCGCAGCAGCAGCAGCGTTTGGACGTTCCTTCTTCGATCAATCGGTTTCAAGATGGATTCTAAAAAGAAGATTAGAATATTTTTTGTTTTAAAATTTTTCTGAGTAATGTTATTGAAATTCTGCAATGACACGCCACCCAGAGAAAGAGAGAGACATAACAAGCTGACAAATGGGGTCATAAATCATAATACAAGGGAA

Coding sequence (CDS)

ATGGTTGGTGTGATGTGTCCTGGAGTAACTAAAAACAAAGGCAAAAACGTCCTTCTCAACCAAACGAGACCAGATTTTGCATATAATAACCCTAAACCCTTTGATTTCTTCCCTTTTAAAGTCACGAGAGGCTTCCTGTTGCGATCCGAGGGGAGCCCTTTGGACCTCAACAACTTACCTGAAGATTATATCAGAGATGGGAAACAGATTATTGAAGATAGCTCTAGTGAGAGAGAGACAGAGACACTGAATCGAGCTCGTCAGCTTGTTTTCAGTAACGATAACCTCGCCGCCCAACCACCACCTCCTCCTCCTCCTCATTTAGGGTGCTGCCATTCAATGGCACCGGCGAACTACCACACCGCGGGCGGCAGCAGCGGCGTAGGAAGTGATTCAACCCTGCCTCTTAGATTTCCAACGAGAATGTTCTCCGGGTCCTCCCCAAGCACCCTTTTGCCGCAGCCGCCGCCACCACCACTACCTCCGTCACACCAGCCATATCTATACAGCTCGCCATCACGGCCTTCGAGTTTCCCTTCCTACTATCCTCCACAAGCCACTATCAACGACTACTACGTGGGGCATGTCTTGGGGAACCCTTCACAGTGCAGCCATCAGACAGTGAACTACGGTTCCGGCTCGGTGGAGTCGAGTAGCTACACTTGTATCGGAGCTCCGGTAGGGCATGGGGCGGCGTTTGGTGGACGAGATGGCGGTGGCAGTGGCGGTAGAGACGGATCGCAGCAGCAGCAGCGTTTGGACGTTCCTTCTTCGATCAATCGGTTTCAAGATGGATTCTAA

Protein sequence

MVGVMCPGVTKNKGKNVLLNQTRPDFAYNNPKPFDFFPFKVTRGFLLRSEGSPLDLNNLPEDYIRDGKQIIEDSSSERETETLNRARQLVFSNDNLAAQPPPPPPPHLGCCHSMAPANYHTAGGSSGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPPSHQPYLYSSPSRPSSFPSYYPPQATINDYYVGHVLGNPSQCSHQTVNYGSGSVESSSYTCIGAPVGHGAAFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF

Homology

[Close]

BLAST of CaUC03G059450 vs. NCBI nr
Match: TYK04130.1 (zinc finger protein JAGGED [Cucumis melo var. makuwa])

HSP 1 Score: 384.4 bits (986), Expect = 7.9e-103
Identity = 217/295 (73.56%), Postives = 222/295 (75.25%), Query Frame = 0


Query: 12  NKGKN---VLLNQTRPDFAYNNPKPFDFFPFKVTRGFLLRSEGSPLDLNNLPEDYIRDGK 71
           NKG+       NQT   F   N        FK+ R    RSEGSPLDLNNLPEDYIRDGK
Sbjct: 22  NKGRGSQFERFNQTFYSFTRRN--------FKIAR----RSEGSPLDLNNLPEDYIRDGK 81

Query: 72  QIIEDSSS-----------------------------------ERETETLNRARQLVFSN 131
           QIIEDSSS                                   ERETETLNRARQLVFSN
Sbjct: 82  QIIEDSSSGHRKKKSGLKEGKEESGKVYECRFCSLKFCKSQALERETETLNRARQLVFSN 141

Query: 132 DNLAAQPPPPPPPHLGCCHSMAPANYHTAGGSSGVGSDSTLPLRFPTRMFSGSSPSTLLP 191
           DNLAAQ   PPPPHLGCCHSMAPANYHTAGGS  VGSDSTLPLRFPTRMFSGSSP TLLP
Sbjct: 142 DNLAAQ---PPPPHLGCCHSMAPANYHTAGGSGSVGSDSTLPLRFPTRMFSGSSPGTLLP 201

Query: 192 QPPPPPLPPSHQPYLYSSPSRPSSFPSYY-PPQATINDYYVGHVLGNPSQCSHQTVNYGS 251
           QPPPPPLP SHQPYLY+SP+RPSSFPSYY PPQA+INDYYVGHVLGNPSQCSHQTVNYGS
Sbjct: 202 QPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYGS 261

Query: 252 GSVESSSYTCIGAPVGHGAA-FGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF 267
             VESSSYTCIGAPVGH AA FGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF
Sbjct: 262 SPVESSSYTCIGAPVGHAAAGFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF 301

[Close]

BLAST of CaUC03G059450 vs. NCBI nr
Match: XP_008465782.1 (PREDICTED: zinc finger protein JAGGED [Cucumis melo])

HSP 1 Score: 381.7 bits (979), Expect = 5.1e-102
Identity = 207/266 (77.82%), Postives = 211/266 (79.32%), Query Frame = 0


Query: 47  LRSEGSPLDLNNLPEDYIRDGKQIIEDSSS------------------------------ 106
           +RSEGSPLDLNNLPEDYIRDGKQIIEDSSS                              
Sbjct: 1   MRSEGSPLDLNNLPEDYIRDGKQIIEDSSSGHRKKKSGLKEGKEESGKVYECRFCSLKFC 60

Query: 107 --------------ERETETLNRARQLVFSNDNLAAQPPPPPPPHLGCCHSMAPANYHTA 166
                         ERETETLNRARQLVFSNDNLAAQ  PPPPPHLGCCHSMAPANYHTA
Sbjct: 61  KSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQ--PPPPPHLGCCHSMAPANYHTA 120

Query: 167 GGSSGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPPSHQPYLYSSPSRPSSFPSYY 226
           GGS  VGSDSTLPLRFPTRMFSGSSP TLLPQPPPPPLP SHQPYLY+SP+RPSSFPSYY
Sbjct: 121 GGSGSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYY 180

Query: 227 -PPQATINDYYVGHVLGNPSQCSHQTVNYGSGSVESSSYTCIGAPVGHGAA-FGGRDGGG 267
            PPQA+INDYYVGHVLGNPSQCSHQTVNYGS  VESSSYTCIGAPVGH AA FGGRDGGG
Sbjct: 181 PPPQASINDYYVGHVLGNPSQCSHQTVNYGSSPVESSSYTCIGAPVGHAAAGFGGRDGGG 240

[Close]

BLAST of CaUC03G059450 vs. NCBI nr
Match: XP_038876123.1 (zinc finger protein JAGGED-like [Benincasa hispida])

HSP 1 Score: 381.3 bits (978), Expect = 6.7e-102
Identity = 208/270 (77.04%), Postives = 214/270 (79.26%), Query Frame = 0


Query: 47  LRSEGSPLDLNNLPEDYIRDGKQIIEDSSS------------------------------ 106
           +RSEGSPLDLNNLPEDYIRDGKQIIEDSS+                              
Sbjct: 1   MRSEGSPLDLNNLPEDYIRDGKQIIEDSSTGHRKKKSGLKEGKEEAGKVYECRFCSLKFC 60

Query: 107 --------------ERETETLNRARQLVFSNDNLAAQPPPPPPPHLGCCHSMAPANYHTA 166
                         ERETETLNRARQLVFSNDNLAAQ  PPPPPHLGCCHSMAPANYHTA
Sbjct: 61  KSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQ--PPPPPHLGCCHSMAPANYHTA 120

Query: 167 -GGSSGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPPSHQPYLYSSPSRPSSFPSY 226
            GG SGVGSDSTLPLRFPTRMFSGSSPS+LLPQPPPPPLPPSHQPYLYSSPSRPSSFPSY
Sbjct: 121 GGGGSGVGSDSTLPLRFPTRMFSGSSPSSLLPQPPPPPLPPSHQPYLYSSPSRPSSFPSY 180

Query: 227 Y-PPQATINDYYVGHVLGNPSQCSHQTVNYGSGSVESSSYTCIGAPVGHGAAFGGRDGGG 267
           Y PPQA+INDYYVGHVLGNPSQCSHQTVNYGS SVE +SY C+GAPVGHGAAFGGRDGGG
Sbjct: 181 YPPPQASINDYYVGHVLGNPSQCSHQTVNYGSSSVEPNSYACVGAPVGHGAAFGGRDGGG 240

[Close]

BLAST of CaUC03G059450 vs. NCBI nr
Match: KAA0047421.1 (zinc finger protein JAGGED [Cucumis melo var. makuwa])

HSP 1 Score: 380.9 bits (977), Expect = 8.7e-102
Identity = 217/304 (71.38%), Postives = 222/304 (73.03%), Query Frame = 0


Query: 12  NKGKN---VLLNQTRPDFAYNNPKPFDFFPFKVTRGFLLRSEGSPLDLNNLPEDYIRDGK 71
           NKG+       NQT   F   N        FK+ R    RSEGSPLDLNNLPEDYIRDGK
Sbjct: 22  NKGRGSQFERFNQTFYSFTRRN--------FKIAR----RSEGSPLDLNNLPEDYIRDGK 81

Query: 72  QIIEDSSS--------------------------------------------ERETETLN 131
           QIIEDSSS                                            ERETETLN
Sbjct: 82  QIIEDSSSGHRKKKSGLKEGKEESGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLN 141

Query: 132 RARQLVFSNDNLAAQPPPPPPPHLGCCHSMAPANYHTAGGSSGVGSDSTLPLRFPTRMFS 191
           RARQLVFSNDNLAAQ   PPPPHLGCCHSMAPANYHTAGGS  VGSDSTLPLRFPTRMFS
Sbjct: 142 RARQLVFSNDNLAAQ---PPPPHLGCCHSMAPANYHTAGGSGSVGSDSTLPLRFPTRMFS 201

Query: 192 GSSPSTLLPQPPPPPLPPSHQPYLYSSPSRPSSFPSYY-PPQATINDYYVGHVLGNPSQC 251
           GSSP TLLPQPPPPPLP SHQPYLY+SP+RPSSFPSYY PPQA+INDYYVGHVLGNPSQC
Sbjct: 202 GSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGNPSQC 261

Query: 252 SHQTVNYGSGSVESSSYTCIGAPVGHGAA-FGGRDGGGSGGRDGSQQQQRLDVPSSINRF 267
           SHQTVNYGS  VESSSYTCIGAPVGH AA FGGRDGGGSGGRDGSQQQQRLDVPSSINRF
Sbjct: 262 SHQTVNYGSSPVESSSYTCIGAPVGHAAAGFGGRDGGGSGGRDGSQQQQRLDVPSSINRF 310

[Close]

BLAST of CaUC03G059450 vs. NCBI nr
Match: XP_011655169.1 (zinc finger protein JAGGED [Cucumis sativus])

HSP 1 Score: 377.9 bits (969), Expect = 7.4e-101
Identity = 205/266 (77.07%), Postives = 210/266 (78.95%), Query Frame = 0


Query: 47  LRSEGSPLDLNNLPEDYIRDGKQIIEDSSS------------------------------ 106
           +RSEGSPLDLNNLPEDYIRDGKQIIEDSSS                              
Sbjct: 1   MRSEGSPLDLNNLPEDYIRDGKQIIEDSSSGHRKKKSGLKEGKEESGKVYECRFCSLKFC 60

Query: 107 --------------ERETETLNRARQLVFSNDNLAAQPPPPPPPHLGCCHSMAPANYHTA 166
                         ERETETLNRARQLVFSNDNLAAQ   PPPPHLGCCHSMAPANYH+A
Sbjct: 61  KSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQ---PPPPHLGCCHSMAPANYHSA 120

Query: 167 GGSSGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPPSHQPYLYSSPSRPSSFPSYY 226
           GGS  VGSDSTLPLRFPTRMFSGSSP TLLPQPPPPPLP SHQPYLY+SP+RPSSFPSYY
Sbjct: 121 GGSGNVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYY 180

Query: 227 -PPQATINDYYVGHVLGNPSQCSHQTVNYGSGSVESSSYTCIGAPVGHGA-AFGGRDGGG 267
            PPQA+INDYYVGHVLGNPSQCSHQTVNYGS SVESSSYTCIGAPVGH A  FGGRDGGG
Sbjct: 181 PPPQASINDYYVGHVLGNPSQCSHQTVNYGSSSVESSSYTCIGAPVGHAAVGFGGRDGGG 240

[Close]

BLAST of CaUC03G059450 vs. ExPASy Swiss-Prot
Match: Q6S591 (Zinc finger protein JAGGED OS=Arabidopsis thaliana OX=3702 GN=JAG PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 4.4e-16
Identity = 91/278 (32.73%), Postives = 120/278 (43.17%), Query Frame = 0


Query: 47  LRSEGSPLDLNNLPEDYIRDG-KQIIEDSSS----------------------------- 106
           +R E + LDLNNLP+D+ +DG KQ +E+ SS                             
Sbjct: 1   MRHEENYLDLNNLPDDFSKDGNKQALEEGSSSGQRKKKGSKEGKDESGKVYECRFCSLKF 60

Query: 107 ---------------ERETETLNRARQLVFSNDNLAAQPPPPPPPHLGCCHSMAPANYHT 166
                          ERETETLN+ARQLV+ ND +     PP     G  H+  P  Y +
Sbjct: 61  CKSQALGGHMNRHRQERETETLNQARQLVYRNDTIT----PPGISPFGYHHTTDPTIYRS 120

Query: 167 AGGSSGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPPSHQPYLYSSPSRPSSFPSY 226
              S         P+ +P     GSS + L+PQPP PP PP   PY YSS        + 
Sbjct: 121 VYSS---------PMIYP-----GSSSTNLVPQPPMPPPPP---PYPYSS--------NQ 180

Query: 227 YPPQATINDYYVG-------HVLGNPSQCSHQTVNYGSGSVESSSYTCIGAPVG------ 265
           Y P    NDYY+         +  +P+  +  TV+Y + S     YTC+GAP+G      
Sbjct: 181 YSPHNHFNDYYLNPSFRGSRSISPSPNLPTTTTVDYMADSPVEPGYTCVGAPIGPTGFPI 240

[Close]

BLAST of CaUC03G059450 vs. ExPASy Swiss-Prot
Match: Q9LG97 (Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SL1 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 4.5e-08
Identity = 77/260 (29.62%), Postives = 104/260 (40.00%), Query Frame = 0


Query: 48  RSEGSPLDLNNLPEDYIRDGKQIIEDSSS------------------------------- 107
           R EGSPLDLNNLP+++   GKQ +E S++                               
Sbjct: 6   RQEGSPLDLNNLPDEF---GKQTVESSTTTAASSAEASRVTKKKSNGGKDEAGKVYECRF 65

Query: 108 --------------------ERETETLNRARQLVFSNDNLAAQPPPP--PPPHLGCCHSM 167
                               ERETETLNRARQLVF ND+LAA          ++G   + 
Sbjct: 66  CSLKFCKSQALGGHMNRHRQERETETLNRARQLVFGNDSLAAVGAQLNFRDVNMGGGGAA 125

Query: 168 APANYHTAGG----SSGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPPSHQPYLYS 227
           AP      GG      GVG D  +PLR             + P+  PP  PP H  YLY+
Sbjct: 126 APPPTMQMGGGGFRGGGVGGDPCIPLR------------PVQPRLSPPQPPPYHH-YLYT 185

Query: 228 SPSRPS-----SFPSYYP------PQATINDYYVGHVLGNPSQCSHQTVNYGSGSVESSS 240
           + + PS     S+P+ YP        A + DY +GH +      +   +         +S
Sbjct: 186 TTAPPSALHPMSYPATYPAPPRHQQPAAVGDYVIGHAVS-----AGDALVAPPPPPHRAS 244

[Close]

BLAST of CaUC03G059450 vs. ExPASy Swiss-Prot
Match: Q6S592 (Zinc finger protein JAGGED-like OS=Arabidopsis thaliana OX=3702 GN=JGL PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 5.1e-04
Identity = 64/229 (27.95%), Postives = 87/229 (37.99%), Query Frame = 0


Query: 50  EGSPLDLNNLPEDYIRDGKQIIEDSSS--------------------------------- 109
           E + LDLNNLP+D  RD     E+  S                                 
Sbjct: 5   ENNTLDLNNLPDDPSRDIFPFFEEGFSSSSSSGGFREKQTKDGKEYECRFCSLKFFKSQA 64

Query: 110 ----------ERETETLNRARQLVFSNDNLAAQPPPPPPPHLGCCHSMAPANYHTAGGSS 169
                     ERETE+LN+AR+LV  ND+         PPH G      P ++    G  
Sbjct: 65  LGGHMNRHRQERETESLNKARELVLRNDSF--------PPHQG------PPSFSYHQGDV 124

Query: 170 GVGSDSTL-PLRFPTRMFSGSSPSTLLPQPPPPPLPPSHQPYLYSSPSRPSSFPSYYPPQ 229
            +G  +   P+ +P R FS    S++L   PP   PP   P+                PQ
Sbjct: 125 HIGDLTQFKPMMYPPRHFSLPGSSSILQLQPPYLYPPLSSPF----------------PQ 184

Query: 230 ATINDYYVGHVLGNPSQCSHQTVN---YGSGSVESSSYTCIGAPVGHGA 232
              N       +GN +   HQT+     G  ++  SSYT IGAPV +G+
Sbjct: 185 HNTN-------IGN-NGTRHQTLTNSVCGGRALPDSSYTFIGAPVANGS 195

[Close]

BLAST of CaUC03G059450 vs. ExPASy TrEMBL
Match: A0A5D3BYD4 (Zinc finger protein JAGGED OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2119G00720 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 3.8e-103
Identity = 217/295 (73.56%), Postives = 222/295 (75.25%), Query Frame = 0


Query: 12  NKGKN---VLLNQTRPDFAYNNPKPFDFFPFKVTRGFLLRSEGSPLDLNNLPEDYIRDGK 71
           NKG+       NQT   F   N        FK+ R    RSEGSPLDLNNLPEDYIRDGK
Sbjct: 22  NKGRGSQFERFNQTFYSFTRRN--------FKIAR----RSEGSPLDLNNLPEDYIRDGK 81

Query: 72  QIIEDSSS-----------------------------------ERETETLNRARQLVFSN 131
           QIIEDSSS                                   ERETETLNRARQLVFSN
Sbjct: 82  QIIEDSSSGHRKKKSGLKEGKEESGKVYECRFCSLKFCKSQALERETETLNRARQLVFSN 141

Query: 132 DNLAAQPPPPPPPHLGCCHSMAPANYHTAGGSSGVGSDSTLPLRFPTRMFSGSSPSTLLP 191
           DNLAAQ   PPPPHLGCCHSMAPANYHTAGGS  VGSDSTLPLRFPTRMFSGSSP TLLP
Sbjct: 142 DNLAAQ---PPPPHLGCCHSMAPANYHTAGGSGSVGSDSTLPLRFPTRMFSGSSPGTLLP 201

Query: 192 QPPPPPLPPSHQPYLYSSPSRPSSFPSYY-PPQATINDYYVGHVLGNPSQCSHQTVNYGS 251
           QPPPPPLP SHQPYLY+SP+RPSSFPSYY PPQA+INDYYVGHVLGNPSQCSHQTVNYGS
Sbjct: 202 QPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYGS 261

Query: 252 GSVESSSYTCIGAPVGHGAA-FGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF 267
             VESSSYTCIGAPVGH AA FGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF
Sbjct: 262 SPVESSSYTCIGAPVGHAAAGFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF 301

[Close]

BLAST of CaUC03G059450 vs. ExPASy TrEMBL
Match: A0A1S3CQ11 (zinc finger protein JAGGED OS=Cucumis melo OX=3656 GN=LOC103503384 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 2.5e-102
Identity = 207/266 (77.82%), Postives = 211/266 (79.32%), Query Frame = 0


Query: 47  LRSEGSPLDLNNLPEDYIRDGKQIIEDSSS------------------------------ 106
           +RSEGSPLDLNNLPEDYIRDGKQIIEDSSS                              
Sbjct: 1   MRSEGSPLDLNNLPEDYIRDGKQIIEDSSSGHRKKKSGLKEGKEESGKVYECRFCSLKFC 60

Query: 107 --------------ERETETLNRARQLVFSNDNLAAQPPPPPPPHLGCCHSMAPANYHTA 166
                         ERETETLNRARQLVFSNDNLAAQ  PPPPPHLGCCHSMAPANYHTA
Sbjct: 61  KSQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQ--PPPPPHLGCCHSMAPANYHTA 120

Query: 167 GGSSGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPPSHQPYLYSSPSRPSSFPSYY 226
           GGS  VGSDSTLPLRFPTRMFSGSSP TLLPQPPPPPLP SHQPYLY+SP+RPSSFPSYY
Sbjct: 121 GGSGSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYY 180

Query: 227 -PPQATINDYYVGHVLGNPSQCSHQTVNYGSGSVESSSYTCIGAPVGHGAA-FGGRDGGG 267
            PPQA+INDYYVGHVLGNPSQCSHQTVNYGS  VESSSYTCIGAPVGH AA FGGRDGGG
Sbjct: 181 PPPQASINDYYVGHVLGNPSQCSHQTVNYGSSPVESSSYTCIGAPVGHAAAGFGGRDGGG 240

[Close]

BLAST of CaUC03G059450 vs. ExPASy TrEMBL
Match: A0A5A7U1F5 (Zinc finger protein JAGGED OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00090 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 4.2e-102
Identity = 217/304 (71.38%), Postives = 222/304 (73.03%), Query Frame = 0


Query: 12  NKGKN---VLLNQTRPDFAYNNPKPFDFFPFKVTRGFLLRSEGSPLDLNNLPEDYIRDGK 71
           NKG+       NQT   F   N        FK+ R    RSEGSPLDLNNLPEDYIRDGK
Sbjct: 22  NKGRGSQFERFNQTFYSFTRRN--------FKIAR----RSEGSPLDLNNLPEDYIRDGK 81

Query: 72  QIIEDSSS--------------------------------------------ERETETLN 131
           QIIEDSSS                                            ERETETLN
Sbjct: 82  QIIEDSSSGHRKKKSGLKEGKEESGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLN 141

Query: 132 RARQLVFSNDNLAAQPPPPPPPHLGCCHSMAPANYHTAGGSSGVGSDSTLPLRFPTRMFS 191
           RARQLVFSNDNLAAQ   PPPPHLGCCHSMAPANYHTAGGS  VGSDSTLPLRFPTRMFS
Sbjct: 142 RARQLVFSNDNLAAQ---PPPPHLGCCHSMAPANYHTAGGSGSVGSDSTLPLRFPTRMFS 201

Query: 192 GSSPSTLLPQPPPPPLPPSHQPYLYSSPSRPSSFPSYY-PPQATINDYYVGHVLGNPSQC 251
           GSSP TLLPQPPPPPLP SHQPYLY+SP+RPSSFPSYY PPQA+INDYYVGHVLGNPSQC
Sbjct: 202 GSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGNPSQC 261

Query: 252 SHQTVNYGSGSVESSSYTCIGAPVGHGAA-FGGRDGGGSGGRDGSQQQQRLDVPSSINRF 267
           SHQTVNYGS  VESSSYTCIGAPVGH AA FGGRDGGGSGGRDGSQQQQRLDVPSSINRF
Sbjct: 262 SHQTVNYGSSPVESSSYTCIGAPVGHAAAGFGGRDGGGSGGRDGSQQQQRLDVPSSINRF 310

[Close]

BLAST of CaUC03G059450 vs. ExPASy TrEMBL
Match: A0A0A0KTC2 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G372190 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 7.9e-101
Identity = 205/265 (77.36%), Postives = 209/265 (78.87%), Query Frame = 0


Query: 48  RSEGSPLDLNNLPEDYIRDGKQIIEDSSS------------------------------- 107
           RSEGSPLDLNNLPEDYIRDGKQIIEDSSS                               
Sbjct: 5   RSEGSPLDLNNLPEDYIRDGKQIIEDSSSGHRKKKSGLKEGKEESGKVYECRFCSLKFCK 64

Query: 108 -------------ERETETLNRARQLVFSNDNLAAQPPPPPPPHLGCCHSMAPANYHTAG 167
                        ERETETLNRARQLVFSNDNLAAQ   PPPPHLGCCHSMAPANYH+AG
Sbjct: 65  SQALGGHMNRHRQERETETLNRARQLVFSNDNLAAQ---PPPPHLGCCHSMAPANYHSAG 124

Query: 168 GSSGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPPSHQPYLYSSPSRPSSFPSYY- 227
           GS  VGSDSTLPLRFPTRMFSGSSP TLLPQPPPPPLP SHQPYLY+SP+RPSSFPSYY 
Sbjct: 125 GSGNVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYP 184

Query: 228 PPQATINDYYVGHVLGNPSQCSHQTVNYGSGSVESSSYTCIGAPVGHGA-AFGGRDGGGS 267
           PPQA+INDYYVGHVLGNPSQCSHQTVNYGS SVESSSYTCIGAPVGH A  FGGRDGGGS
Sbjct: 185 PPQASINDYYVGHVLGNPSQCSHQTVNYGSSSVESSSYTCIGAPVGHAAVGFGGRDGGGS 244

[Close]

BLAST of CaUC03G059450 vs. ExPASy TrEMBL
Match: A0A6J1I6U1 (zinc finger protein JAGGED-like OS=Cucurbita maxima OX=3661 GN=LOC111470498 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.5e-83
Identity = 185/269 (68.77%), Postives = 197/269 (73.23%), Query Frame = 0


Query: 46  LLRSEGSPLDLNNLPEDYIRDGKQIIEDSSS----------------------------- 105
           ++RS+GSPLDLNNLPEDYIRD KQIIED+S+                             
Sbjct: 1   MMRSQGSPLDLNNLPEDYIRDRKQIIEDTSTGHRKKKSGGKEGNEESGKVYECRFCSLKF 60

Query: 106 ---------------ERETETLNRARQLVFSNDNLAAQPPPPPPPHLGCCHSMAPANYHT 165
                          ERETETLNRARQLVFSNDNLA Q    PPPHLGCCHSMAP +YHT
Sbjct: 61  CKSQALGGHMNRHRQERETETLNRARQLVFSNDNLAVQ---SPPPHLGCCHSMAPGSYHT 120

Query: 166 AGGSSGVGSDSTLPLRFPTRMFSGSSPSTLL-PQPPPPPLPPSHQPYLYSSPSRPSSFPS 225
           A GS GVGSD TL LRFPTRMF GSSP+TLL P P PPP PP HQPYLYSSPSRPSSFPS
Sbjct: 121 A-GSGGVGSDPTLSLRFPTRMFPGSSPTTLLPPTPSPPPPPPPHQPYLYSSPSRPSSFPS 180

Query: 226 YY-PPQATINDYYVGHVLGNPSQCSHQTVNYG--SGSVESSSYTCIGAPVGHGAAFGGRD 267
           YY PPQA+INDYYVGHVLGNP+QCSHQT+NYG  S S+ESSSYTCIGAPVG  A FGGR+
Sbjct: 181 YYPPPQASINDYYVGHVLGNPAQCSHQTMNYGSTSSSMESSSYTCIGAPVGPAATFGGRE 240

[Close]

BLAST of CaUC03G059450 vs. TAIR 10
Match: AT1G68480.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 86.7 bits (213), Expect = 3.2e-17
Identity = 91/278 (32.73%), Postives = 120/278 (43.17%), Query Frame = 0


Query: 47  LRSEGSPLDLNNLPEDYIRDG-KQIIEDSSS----------------------------- 106
           +R E + LDLNNLP+D+ +DG KQ +E+ SS                             
Sbjct: 1   MRHEENYLDLNNLPDDFSKDGNKQALEEGSSSGQRKKKGSKEGKDESGKVYECRFCSLKF 60

Query: 107 ---------------ERETETLNRARQLVFSNDNLAAQPPPPPPPHLGCCHSMAPANYHT 166
                          ERETETLN+ARQLV+ ND +     PP     G  H+  P  Y +
Sbjct: 61  CKSQALGGHMNRHRQERETETLNQARQLVYRNDTIT----PPGISPFGYHHTTDPTIYRS 120

Query: 167 AGGSSGVGSDSTLPLRFPTRMFSGSSPSTLLPQPPPPPLPPSHQPYLYSSPSRPSSFPSY 226
              S         P+ +P     GSS + L+PQPP PP PP   PY YSS        + 
Sbjct: 121 VYSS---------PMIYP-----GSSSTNLVPQPPMPPPPP---PYPYSS--------NQ 180

Query: 227 YPPQATINDYYVG-------HVLGNPSQCSHQTVNYGSGSVESSSYTCIGAPVG------ 265
           Y P    NDYY+         +  +P+  +  TV+Y + S     YTC+GAP+G      
Sbjct: 181 YSPHNHFNDYYLNPSFRGSRSISPSPNLPTTTTVDYMADSPVEPGYTCVGAPIGPTGFPI 240

[Close]

BLAST of CaUC03G059450 vs. TAIR 10
Match: AT1G13400.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 46.6 bits (109), Expect = 3.6e-05
Identity = 64/229 (27.95%), Postives = 87/229 (37.99%), Query Frame = 0


Query: 50  EGSPLDLNNLPEDYIRDGKQIIEDSSS--------------------------------- 109
           E + LDLNNLP+D  RD     E+  S                                 
Sbjct: 5   ENNTLDLNNLPDDPSRDIFPFFEEGFSSSSSSGGFREKQTKDGKEYECRFCSLKFFKSQA 64

Query: 110 ----------ERETETLNRARQLVFSNDNLAAQPPPPPPPHLGCCHSMAPANYHTAGGSS 169
                     ERETE+LN+AR+LV  ND+         PPH G      P ++    G  
Sbjct: 65  LGGHMNRHRQERETESLNKARELVLRNDSF--------PPHQG------PPSFSYHQGDV 124

Query: 170 GVGSDSTL-PLRFPTRMFSGSSPSTLLPQPPPPPLPPSHQPYLYSSPSRPSSFPSYYPPQ 229
            +G  +   P+ +P R FS    S++L   PP   PP   P+                PQ
Sbjct: 125 HIGDLTQFKPMMYPPRHFSLPGSSSILQLQPPYLYPPLSSPF----------------PQ 184

Query: 230 ATINDYYVGHVLGNPSQCSHQTVN---YGSGSVESSSYTCIGAPVGHGA 232
              N       +GN +   HQT+     G  ++  SSYT IGAPV +G+
Sbjct: 185 HNTN-------IGN-NGTRHQTLTNSVCGGRALPDSSYTFIGAPVANGS 195

The following BLAST results are available for this feature:

BLAST of CaUC03G059450 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK04130.1	7.9e-103	73.56	zinc finger protein JAGGED [Cucumis melo var. makuwa]	[more]
XP_008465782.1	5.1e-102	77.82	PREDICTED: zinc finger protein JAGGED [Cucumis melo]	[more]
XP_038876123.1	6.7e-102	77.04	zinc finger protein JAGGED-like [Benincasa hispida]	[more]
KAA0047421.1	8.7e-102	71.38	zinc finger protein JAGGED [Cucumis melo var. makuwa]	[more]
XP_011655169.1	7.4e-101	77.07	zinc finger protein JAGGED [Cucumis sativus]	[more]

BLAST of CaUC03G059450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6S591	4.4e-16	32.73	Zinc finger protein JAGGED OS=Arabidopsis thaliana OX=3702 GN=JAG PE=1 SV=1	[more]
Q9LG97	4.5e-08	29.62	Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SL1...	[more]
Q6S592	5.1e-04	27.95	Zinc finger protein JAGGED-like OS=Arabidopsis thaliana OX=3702 GN=JGL PE=2 SV=1	[more]

BLAST of CaUC03G059450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BYD4	3.8e-103	73.56	Zinc finger protein JAGGED OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3CQ11	2.5e-102	77.82	zinc finger protein JAGGED OS=Cucumis melo OX=3656 GN=LOC103503384 PE=4 SV=1	[more]
A0A5A7U1F5	4.2e-102	71.38	Zinc finger protein JAGGED OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A0A0KTC2	7.9e-101	77.36	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G372190 P...	[more]
A0A6J1I6U1	1.5e-83	68.77	zinc finger protein JAGGED-like OS=Cucurbita maxima OX=3661 GN=LOC111470498 PE=4...	[more]

BLAST of CaUC03G059450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68480.1	3.2e-17	32.73	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G13400.1	3.6e-05	27.95	C2H2 and C2HC zinc fingers superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..176
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 231..266
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..168
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 243..266
None	No IPR available	PANTHER	PTHR45730	ZINC FINGER PROTEIN JAGGED	coord: 77..251
IPR031113	Zinc finger protein JAGGED-like	PANTHER	PTHR45730:SF32	ZINC FINGER PROTEIN JAGGED	coord: 77..251

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC03G059450.1	CaUC03G059450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007275	multicellular organism development
biological_process	GO:0001522	pseudouridine synthesis
molecular_function	GO:0009982	pseudouridine synthase activity
molecular_function	GO:0003723	RNA binding