CaUC03G056620 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC03G056620
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	DUF4228 domain-containing protein
Location	Ciama_Chr03: 7374854 .. 7376136 (-)
RNA-Seq Expression	CaUC03G056620
Synteny	CaUC03G056620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAAATTCTGTGTCTCGATCTCTCTTCTGCCTCTCCCATATTTGGTTTTACTAATCCTCTCTCCCATATTTTCTCTTTCCTTCGACTCTCTCTCTCCTCCAAGAGGTTGACGAAACAAAAGAAACTGAAAAACTAAATTAAAATTCTTTTTTCTTTTTTTCTTTTTTTCTTTTTTTAAAAAAAAAAAAGAACACACACAGGCAATGAAAAATAGCATAAGATGCTGCATATCTTGCATTCTTCCATGTGGAGCTTTGGATGTGATTCGCATAGTACACTCCAATGGCTACGTCGAAGAAATCAGCGGCTCCATCAAAGCTTCCGACGTCATGAAAGCCCATCCCAAACACGTCCTCAAAAAGCCTTCCTCCCCTTCCTCCGCCGCCCACGACGCCGCCTCCTCCCTCCCCAAGATCGTCATCGTCCCACCGGAAGCCGACCTCCAACGCGGTAAGATTTATTTCCTCATGCCACTCCCTCCTACTCCTCCCAATCCCGATAAGCCCCGCCGAAGAAAGAAGAGAGATTCAAATAACAACAATCATCATCATCATCATTCCCACCGGACAACCACCGCCGCCGTACCCGACAACAACAACATTTCCATGACCAACCTCCTCGTTTCCGACCACTACCTCTCTGAAATACTCTCCGACAAAGCCTCCACCCACCGCGAAAGGCGGCGCGGCCGTGTCGGCGTTTGGAGACCTCACTTACAAAGCATTTGTGAATCCCCCAGTGATATCTAAAAAAATCGGCTATTCAGGTTGTGGGTTTTTTTTTTTTTTTTTTTACTCTTTTTCTTTTTTTTAAACATAAATATATATCATCATAATTAAATTCCATTTCTTCTATATATATCAATATCATGAATCATTCATAAATAAATAAATAATACTTTTTTTTCTAGAGGGATCTGAAATTAATTAAGAATTAATGTGGTAAATTTAATTAGTTACTGATTTATGCTTAATTAATTTTCAGTTTTTTTCTTTTTTAATTGGTGGAGACTTGTGGTTCTAGAGAGAGAGAGCCCACTTTCCACTGTTTGAGAATTCATTGTGTGTGGAATGCATGAACATAATTTTGAGTGATTGTGATATGATGATATGATTGTACAGCTGCAATAATCTACTTTCTTTTCTCCAATTTTTTATACCCCATTATGCCATCATTTTTACACTTAATTTCTTCTTAATTTTTCTATTATTTTGTTAACTAATATCCACTCTATAAATATTTAGGTTAAATTTTGAATTTGGTTTCTAAACTGTCAAG

mRNA sequence

ATGAAGAAAATTCTGTGTCTCGATCTCTCTTCTGCCTCTCCCATATTTGAACACACACAGGCAATGAAAAATAGCATAAGATGCTGCATATCTTGCATTCTTCCATGTGGAGCTTTGGATGTGATTCGCATAGTACACTCCAATGGCTACGTCGAAGAAATCAGCGGCTCCATCAAAGCTTCCGACGTCATGAAAGCCCATCCCAAACACGTCCTCAAAAAGCCTTCCTCCCCTTCCTCCGCCGCCCACGACGCCGCCTCCTCCCTCCCCAAGATCGTCATCGTCCCACCGGAAGCCGACCTCCAACGCGGTAAGATTTATTTCCTCATGCCACTCCCTCCTACTCCTCCCAATCCCGATAAGCCCCGCCGAAGAAAGAAGAGAGATTCAAATAACAACAATCATCATCATCATCATTCCCACCGGACAACCACCGCCGCCGTACCCGACAACAACAACATTTCCATGACCAACCTCCTCGTTTCCGACCACTACCTCTCTGAAATACTCTCCGACAAAGCCTCCACCCACCGCGAAAGGCGGCGCGGCCGTGTCGGCGTTTGGAGACCTCACTTACAAAGCATTTGTGAATCCCCCAGTGATATCTAAAAAAATCGGCTATTCAGGTTGTGGGTTTTTTTTTTTTTTTTTTTACTCTTTTTCTTTTTTTTAAACATAAATATATATCATCATAATTAAATTCCATTTCTTCTATATATATCAATATCATGAATCATTCATAAATAAATAAATAATACTTTTTTTTCTAGAGGGATCTGAAATTAATTAAGAATTAATGTGGTAAATTTAATTAGTTACTGATTTATGCTTAATTAATTTTCAGTTTTTTTCTTTTTTAATTGGTGGAGACTTGTGGTTCTAGAGAGAGAGAGCCCACTTTCCACTGTTTGAGAATTCATTGTGTGTGGAATGCATGAACATAATTTTGAGTGATTGTGATATGATGATATGATTGTACAGCTGCAATAATCTACTTTCTTTTCTCCAATTTTTTATACCCCATTATGCCATCATTTTTACACTTAATTTCTTCTTAATTTTTCTATTATTTTGTTAACTAATATCCACTCTATAAATATTTAGGTTAAATTTTGAATTTGGTTTCTAAACTGTCAAG

Coding sequence (CDS)

ATGAAGAAAATTCTGTGTCTCGATCTCTCTTCTGCCTCTCCCATATTTGAACACACACAGGCAATGAAAAATAGCATAAGATGCTGCATATCTTGCATTCTTCCATGTGGAGCTTTGGATGTGATTCGCATAGTACACTCCAATGGCTACGTCGAAGAAATCAGCGGCTCCATCAAAGCTTCCGACGTCATGAAAGCCCATCCCAAACACGTCCTCAAAAAGCCTTCCTCCCCTTCCTCCGCCGCCCACGACGCCGCCTCCTCCCTCCCCAAGATCGTCATCGTCCCACCGGAAGCCGACCTCCAACGCGGTAAGATTTATTTCCTCATGCCACTCCCTCCTACTCCTCCCAATCCCGATAAGCCCCGCCGAAGAAAGAAGAGAGATTCAAATAACAACAATCATCATCATCATCATTCCCACCGGACAACCACCGCCGCCGTACCCGACAACAACAACATTTCCATGACCAACCTCCTCGTTTCCGACCACTACCTCTCTGAAATACTCTCCGACAAAGCCTCCACCCACCGCGAAAGGCGGCGCGGCCGTGTCGGCGTTTGGAGACCTCACTTACAAAGCATTTGTGAATCCCCCAGTGATATCTAA

Protein sequence

MKKILCLDLSSASPIFEHTQAMKNSIRCCISCILPCGALDVIRIVHSNGYVEEISGSIKASDVMKAHPKHVLKKPSSPSSAAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPTPPNPDKPRRRKKRDSNNNNHHHHHSHRTTTAAVPDNNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESPSDI

Homology

[Close]

BLAST of CaUC03G056620 vs. NCBI nr
Match: XP_038894960.1 (uncharacterized protein LOC120083324 [Benincasa hispida])

HSP 1 Score: 324.7 bits (831), Expect = 5.6e-85
Identity = 168/183 (91.80%), Postives = 173/183 (94.54%), Query Frame = 0


Query: 22  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEISGSIKASDVMKAHPKHVLKKPSSPSSA 81
           MKNSIRCCISCILPCG LDVIRIVHSNGYVEEISGSIKASDVMKAHPKHVLKKPSSPSSA
Sbjct: 1   MKNSIRCCISCILPCGVLDVIRIVHSNGYVEEISGSIKASDVMKAHPKHVLKKPSSPSSA 60

Query: 82  AHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPTPPNPDKPRRRKKRDSNNN-NHHHHHS 141
           AHDAA++ PKIVIVPPEADLQRGKIYFLMPLPPTPPNPDKPRRRKKRDSNNN NHH H +
Sbjct: 61  AHDAATA-PKIVIVPPEADLQRGKIYFLMPLPPTPPNPDKPRRRKKRDSNNNINHHSHRT 120

Query: 142 HRTTTAAVP-DNNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESP 201
               +AAVP +NNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESP
Sbjct: 121 TAAVSAAVPNNNNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICESP 180

Query: 202 SDI 203
           SDI
Sbjct: 181 SDI 182

[Close]

BLAST of CaUC03G056620 vs. NCBI nr
Match: XP_008443296.1 (PREDICTED: uncharacterized protein LOC103486913 [Cucumis melo] >KAA0057042.1 DUF4228 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 304.7 bits (779), Expect = 6.0e-79
Identity = 163/187 (87.17%), Postives = 171/187 (91.44%), Query Frame = 0


Query: 22  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEISGSIKASDVMKAHPKHVLKKPSSP--S 81
           MKNSIRCCISCILPCGALDVIRIVHSNGYVEEI+GSIKASDVMKAHPKHVLKKPSSP  S
Sbjct: 1   MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSS 60

Query: 82  SAAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPTPPNPDKPRRRKKRDSNNNNHHHHH 141
           SAAHDAASSLPKIVIVPPEADLQRGKIYFLMPL   PP+PDKPRRRKKR+ ++NNHH   
Sbjct: 61  SAAHDAASSLPKIVIVPPEADLQRGKIYFLMPL---PPDPDKPRRRKKRE-HSNNHHRTI 120

Query: 142 SHRTTTAAVPD----NNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSI 201
           +  +T +AVPD    NNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSI
Sbjct: 121 TTASTASAVPDTTTNNNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSI 180

Query: 202 CESPSDI 203
           CESPSDI
Sbjct: 181 CESPSDI 183

[Close]

BLAST of CaUC03G056620 vs. NCBI nr
Match: KGN65978.2 (hypothetical protein Csa_019723 [Cucumis sativus])

HSP 1 Score: 301.2 bits (770), Expect = 6.7e-78
Identity = 161/185 (87.03%), Postives = 170/185 (91.89%), Query Frame = 0


Query: 21  AMKNSIRCCISCILPCGALDVIRIVHSNGYVEEISGSIKASDVMKAHPKHVLKKPSSP-S 80
           AMKNSIRCCISCILPCGALDVIRIVHSNGYVEEI+GSIKASDVMKAHPKHVLKKPSSP S
Sbjct: 2   AMKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSS 61

Query: 81  SAAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPTPPNPDKPRRRKKRDSNNNNHHHHH 140
           SAAHDAAS+LPKIVIVPPEADLQRGKIYFLMPL   PP+PDKPRRRKKR+  +NNHH   
Sbjct: 62  SAAHDAASALPKIVIVPPEADLQRGKIYFLMPL---PPDPDKPRRRKKRE-YSNNHHRTT 121

Query: 141 SHRTTTAAVPD--NNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICE 200
           +  +T +AVPD   N+ISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICE
Sbjct: 122 TAASTASAVPDTTTNSISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICE 181

Query: 201 SPSDI 203
           SPSDI
Sbjct: 182 SPSDI 182

[Close]

BLAST of CaUC03G056620 vs. NCBI nr
Match: XP_004150211.1 (uncharacterized protein LOC101205379 [Cucumis sativus])

HSP 1 Score: 299.7 bits (766), Expect = 1.9e-77
Identity = 160/184 (86.96%), Postives = 169/184 (91.85%), Query Frame = 0


Query: 22  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEISGSIKASDVMKAHPKHVLKKPSSP-SS 81
           MKNSIRCCISCILPCGALDVIRIVHSNGYVEEI+GSIKASDVMKAHPKHVLKKPSSP SS
Sbjct: 1   MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSS 60

Query: 82  AAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPTPPNPDKPRRRKKRDSNNNNHHHHHS 141
           AAHDAAS+LPKIVIVPPEADLQRGKIYFLMPL   PP+PDKPRRRKKR+  +NNHH   +
Sbjct: 61  AAHDAASALPKIVIVPPEADLQRGKIYFLMPL---PPDPDKPRRRKKRE-YSNNHHRTTT 120

Query: 142 HRTTTAAVPD--NNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICES 201
             +T +AVPD   N+ISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICES
Sbjct: 121 AASTASAVPDTTTNSISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICES 180

Query: 202 PSDI 203
           PSDI
Sbjct: 181 PSDI 180

[Close]

BLAST of CaUC03G056620 vs. NCBI nr
Match: KAG6583958.1 (hypothetical protein SDJN03_19890, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 286.2 bits (731), Expect = 2.2e-73
Identity = 156/200 (78.00%), Postives = 168/200 (84.00%), Query Frame = 0


Query: 22  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEISGSIKASDVMKAHPKHVLKKPSSPSSA 81
           M+NSIRCCISCILPCGALDVIRIVHSNGYVEEISGSIKASDVMKAHPKHVLKKPSSPSS+
Sbjct: 1   MRNSIRCCISCILPCGALDVIRIVHSNGYVEEISGSIKASDVMKAHPKHVLKKPSSPSSS 60

Query: 82  A--HDAASSLPKIVIVPPEADLQRGKIYFLMPLPPTPPNPDKPR-----RRKKRDSNNNN 141
           A   D AS+LPKIVIVPPEADLQRGKIYFLMPL   PPNPDKPR     RRKKR +NNNN
Sbjct: 61  AACSDDASALPKIVIVPPEADLQRGKIYFLMPL---PPNPDKPRSRSSSRRKKRVTNNNN 120

Query: 142 HHHHHSHRTTTAAVP------------DNNNISMTNLLVSDHYLSEILSDKASTHRERRR 201
            ++HHS RT  AA              +NN+ISM+NLLVSD YLSEILS+KASTHRERRR
Sbjct: 121 KNNHHSDRTPPAAASATADSDDDDNNNNNNSISMSNLLVSDQYLSEILSEKASTHRERRR 180

Query: 202 GRVGVWRPHLQSICESPSDI 203
           GRVGVWRPHL+SICESPSD+
Sbjct: 181 GRVGVWRPHLESICESPSDV 197

[Close]

BLAST of CaUC03G056620 vs. ExPASy TrEMBL
Match: A0A5A7UMG1 (DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002290 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 2.9e-79
Identity = 163/187 (87.17%), Postives = 171/187 (91.44%), Query Frame = 0


Query: 22  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEISGSIKASDVMKAHPKHVLKKPSSP--S 81
           MKNSIRCCISCILPCGALDVIRIVHSNGYVEEI+GSIKASDVMKAHPKHVLKKPSSP  S
Sbjct: 1   MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSS 60

Query: 82  SAAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPTPPNPDKPRRRKKRDSNNNNHHHHH 141
           SAAHDAASSLPKIVIVPPEADLQRGKIYFLMPL   PP+PDKPRRRKKR+ ++NNHH   
Sbjct: 61  SAAHDAASSLPKIVIVPPEADLQRGKIYFLMPL---PPDPDKPRRRKKRE-HSNNHHRTI 120

Query: 142 SHRTTTAAVPD----NNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSI 201
           +  +T +AVPD    NNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSI
Sbjct: 121 TTASTASAVPDTTTNNNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSI 180

Query: 202 CESPSDI 203
           CESPSDI
Sbjct: 181 CESPSDI 183

[Close]

BLAST of CaUC03G056620 vs. ExPASy TrEMBL
Match: A0A1S3B8G2 (uncharacterized protein LOC103486913 OS=Cucumis melo OX=3656 GN=LOC103486913 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 2.9e-79
Identity = 163/187 (87.17%), Postives = 171/187 (91.44%), Query Frame = 0


Query: 22  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEISGSIKASDVMKAHPKHVLKKPSSP--S 81
           MKNSIRCCISCILPCGALDVIRIVHSNGYVEEI+GSIKASDVMKAHPKHVLKKPSSP  S
Sbjct: 1   MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSS 60

Query: 82  SAAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPTPPNPDKPRRRKKRDSNNNNHHHHH 141
           SAAHDAASSLPKIVIVPPEADLQRGKIYFLMPL   PP+PDKPRRRKKR+ ++NNHH   
Sbjct: 61  SAAHDAASSLPKIVIVPPEADLQRGKIYFLMPL---PPDPDKPRRRKKRE-HSNNHHRTI 120

Query: 142 SHRTTTAAVPD----NNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSI 201
           +  +T +AVPD    NNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSI
Sbjct: 121 TTASTASAVPDTTTNNNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSI 180

Query: 202 CESPSDI 203
           CESPSDI
Sbjct: 181 CESPSDI 183

[Close]

BLAST of CaUC03G056620 vs. ExPASy TrEMBL
Match: A0A0A0M094 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G471460 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 9.4e-78
Identity = 160/184 (86.96%), Postives = 169/184 (91.85%), Query Frame = 0


Query: 22  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEISGSIKASDVMKAHPKHVLKKPSSP-SS 81
           MKNSIRCCISCILPCGALDVIRIVHSNGYVEEI+GSIKASDVMKAHPKHVLKKPSSP SS
Sbjct: 1   MKNSIRCCISCILPCGALDVIRIVHSNGYVEEITGSIKASDVMKAHPKHVLKKPSSPSSS 60

Query: 82  AAHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPTPPNPDKPRRRKKRDSNNNNHHHHHS 141
           AAHDAAS+LPKIVIVPPEADLQRGKIYFLMPL   PP+PDKPRRRKKR+  +NNHH   +
Sbjct: 61  AAHDAASALPKIVIVPPEADLQRGKIYFLMPL---PPDPDKPRRRKKRE-YSNNHHRTTT 120

Query: 142 HRTTTAAVPD--NNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICES 201
             +T +AVPD   N+ISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICES
Sbjct: 121 AASTASAVPDTTTNSISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQSICES 180

Query: 202 PSDI 203
           PSDI
Sbjct: 181 PSDI 180

[Close]

BLAST of CaUC03G056620 vs. ExPASy TrEMBL
Match: A0A6J1KLR7 (rhoGEF domain-containing protein gxcI-like OS=Cucurbita maxima OX=3661 GN=LOC111495719 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 1.0e-71
Identity = 156/202 (77.23%), Postives = 167/202 (82.67%), Query Frame = 0


Query: 22  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEISGSIKASDVMKAHPKHVLKKPSSPSSA 81
           M+NSIRCCISCILPCGALDVIRIVHSNGYVEEISGSIKASDVMKAHPKHVLKKPSSPSS+
Sbjct: 1   MRNSIRCCISCILPCGALDVIRIVHSNGYVEEISGSIKASDVMKAHPKHVLKKPSSPSSS 60

Query: 82  A--HDAASSLPKIVIVPPEADLQRGKIYFLMPLPPTPPNPDKPR-----RRKKRDSNNNN 141
           A   D AS+LPKIVIVPPEADLQRGKIYFLMPL   PPNPDKPR     RRKKR +NNNN
Sbjct: 61  AACADDASALPKIVIVPPEADLQRGKIYFLMPL---PPNPDKPRSRSSSRRKKRVTNNNN 120

Query: 142 HHHHHSHRTTTAAV----------PDNNN----ISMTNLLVSDHYLSEILSDKASTHRER 201
            ++HHS RT  AA+           DNNN    ISM+NL VSD YLSEILS+KASTHRER
Sbjct: 121 KNNHHSDRTPPAALASATADTDDNDDNNNNNSSISMSNLHVSDQYLSEILSEKASTHRER 180

Query: 202 RRGRVGVWRPHLQSICESPSDI 203
           RRGRVGVWRPHL+SICESPS +
Sbjct: 181 RRGRVGVWRPHLESICESPSHV 199

[Close]

BLAST of CaUC03G056620 vs. ExPASy TrEMBL
Match: A0A6P5WYR0 (ELMO domain-containing protein F-like OS=Durio zibethinus OX=66656 GN=LOC111278682 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 7.5e-59
Identity = 127/187 (67.91%), Postives = 150/187 (80.21%), Query Frame = 0


Query: 22  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEISGSIKASDVMKAHPKHVLKKPSSPSSA 81
           MKN+IRCCISCILPCGALDVIRI+HSNG VEEISGSIKAS++MKAHPKHVLKKPSSPS  
Sbjct: 1   MKNTIRCCISCILPCGALDVIRIIHSNGRVEEISGSIKASEIMKAHPKHVLKKPSSPSD- 60

Query: 82  AHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPTP-------PNPDKPRRRKKRDSNNNN 141
                  +PKIVIVPP+A+LQRGKIYFLMP+P TP        +  K +RR   DS+NNN
Sbjct: 61  ----DGMVPKIVIVPPDAELQRGKIYFLMPVPSTPEKNRSKSSSTTKKKRRDSLDSSNNN 120

Query: 142 HHHHHSHRTTTAAVPDNNNISMTNLLVSDHYLSEILSDKASTHRERRRGRVGVWRPHLQS 201
           + + HS ++ + A  +NN ISMTNLL+SD YLSEILS+K ST R+RRRGRVGVWRPHL+S
Sbjct: 121 NSNSHS-QSMSNANKNNNTISMTNLLISDQYLSEILSEKLSTQRDRRRGRVGVWRPHLES 180

[Close]

BLAST of CaUC03G056620 vs. TAIR 10
Match: AT1G29195.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30230.1); Has 180 Blast hits to 180 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 180; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 181.0 bits (458), Expect = 9.4e-46
Identity = 106/189 (56.08%), Postives = 133/189 (70.37%), Query Frame = 0


Query: 22  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEISGSIKASDVMKAHPKHVLKKPSSPSSA 81
           MK +IRCCI+CILPCGALDVIRIVHSNG+VEEISG+I AS++MKAHPKHVLKKPSSP+S 
Sbjct: 1   MKETIRCCIACILPCGALDVIRIVHSNGHVEEISGTITASEIMKAHPKHVLKKPSSPTS- 60

Query: 82  AHDAAS--SLPKIVIVPPEADLQRGKIYFLMPLPPTPPNPDKPR-RRKKRDSN-----NN 141
            HD     S  KIVIVPPEA+LQRGKIYFLMP   +       + RR+K ++N      +
Sbjct: 61  DHDERDVISATKIVIVPPEAELQRGKIYFLMPATKSDKCAGGGKIRREKSNANAVVKKRS 120

Query: 142 NHHHHHSHRTTTAAVPDNNNISMTN-----LLVSDHYLSEILSDKASTHRERRRGRVGVW 198
            +   H          ++N++   N     L+ SD YL+EILS+K +T ++RR+GRVGVW
Sbjct: 121 QYRRQHRDGDEKCNGGESNDVKDKNYEKDLLISSDRYLTEILSEKVATQKDRRKGRVGVW 180

[Close]

BLAST of CaUC03G056620 vs. TAIR 10
Match: AT1G06980.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, carpel; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30230.1); Has 159 Blast hits to 159 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 159; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 117.1 bits (292), Expect = 1.7e-26
Identity = 75/182 (41.21%), Postives = 103/182 (56.59%), Query Frame = 0


Query: 22  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEISGSIKASDVMKAHPKHVLKKPSSPSSA 81
           M NS+RCC++C+LPCGALD+IRIVH NGYVEEI+ SI A ++++A+P HVL KP S    
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGYVEEITRSITAGEILQANPNHVLSKPCS---- 60

Query: 82  AHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPTPPNPDKPRRRKKRDSNNNNHHHHHSH 141
                  + KI+I+ PE++L+RG IYFL+   P    P+K RRRK       N  +  + 
Sbjct: 61  ----QGVVRKILILSPESELKRGSIYFLI---PDSSLPEKKRRRKDTPRRKKNLQNPSAD 120

Query: 142 RTTTAAVPDNNNISMTNLLVSDHYLSEILSDKAS--THRERRR----GRVGVWRPHLQSI 198
                   D   + +      + YL E++S  ++   HR RRR      V  WRP L SI
Sbjct: 121 AAGREIKGDEECVKL-----CEKYLEEVVSSASTGKEHRHRRRHSRSASVSTWRPLLDSI 166

[Close]

BLAST of CaUC03G056620 vs. TAIR 10
Match: AT2G30230.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06980.1); Has 167 Blast hits to 167 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 114.8 bits (286), Expect = 8.2e-26
Identity = 71/183 (38.80%), Postives = 108/183 (59.02%), Query Frame = 0


Query: 22  MKNSIRCCISCILPCGALDVIRIVHSNGYVEEISGSIKASDVMKAHPKHVLKKPSSPSSA 81
           M NS+RCC++C+LPCGALD+IRIVH NG+V+EI+  + A ++++A+P HVL KP S    
Sbjct: 1   MGNSLRCCLACVLPCGALDLIRIVHLNGHVDEITSPMTAGEILQANPNHVLSKPCS---- 60

Query: 82  AHDAASSLPKIVIVPPEADLQRGKIYFLMPLPPTPPNPDKPRRRKK---RDSNNNNHHHH 141
                  + KI+I+ PE++L+RG IYFL+P   + P   K ++RK+   R     + +  
Sbjct: 61  ----QGVVRKILILSPESELKRGSIYFLIP-DTSMPEKKKTKKRKELRCRKKPLESGNDI 120

Query: 142 HSHRTTTAAVPDNNNISMTNLLVSDHYLSEILSDKASTHRERRR----GRVGVWRPHLQS 198
           +S   +T    D + +++    + D  LSE +S     +R RR+      V  WRPHL S
Sbjct: 121 NSDHVSTNKDLDGHCLTLCEKYLEDVMLSEKMSSAGKENRHRRKHSRSASVSTWRPHLDS 174

The following BLAST results are available for this feature:

BLAST of CaUC03G056620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038894960.1	5.6e-85	91.80	uncharacterized protein LOC120083324 [Benincasa hispida]	[more]
XP_008443296.1	6.0e-79	87.17	PREDICTED: uncharacterized protein LOC103486913 [Cucumis melo] >KAA0057042.1 DUF...	[more]
KGN65978.2	6.7e-78	87.03	hypothetical protein Csa_019723 [Cucumis sativus]	[more]
XP_004150211.1	1.9e-77	86.96	uncharacterized protein LOC101205379 [Cucumis sativus]	[more]
KAG6583958.1	2.2e-73	78.00	hypothetical protein SDJN03_19890, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CaUC03G056620 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC03G056620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UMG1	2.9e-79	87.17	DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A1S3B8G2	2.9e-79	87.17	uncharacterized protein LOC103486913 OS=Cucumis melo OX=3656 GN=LOC103486913 PE=...	[more]
A0A0A0M094	9.4e-78	86.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G471460 PE=4 SV=1	[more]
A0A6J1KLR7	1.0e-71	77.23	rhoGEF domain-containing protein gxcI-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6P5WYR0	7.5e-59	67.91	ELMO domain-containing protein F-like OS=Durio zibethinus OX=66656 GN=LOC1112786...	[more]

BLAST of CaUC03G056620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29195.1	9.4e-46	56.08	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G06980.1	1.7e-26	41.21	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G30230.1	8.2e-26	38.80	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 27..197 e-value: 2.3E-32 score: 112.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..142
None	No IPR available	PANTHER	PTHR33052	DUF4228 DOMAIN PROTEIN-RELATED	coord: 22..200
None	No IPR available	PANTHER	PTHR33052:SF3	OS01G0758500 PROTEIN	coord: 22..200

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC03G056620.1	CaUC03G056620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0003723	RNA binding