CaUC03G051640 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGAAAAAGCATTTAAAACTAAAATTGAAACTGGGAAGCGAGGAAGAATACACTAAAACCCTGGGGAGGGCGTTCTTCCCTCCTCCACTCTCCTCTTCTTTCTACTCCGATGGACTGAAGAACAGCAATCTATGGTGAAAATGAAGATTAAGCTTCTTGCTAGAAGACGATTACACTCCTACTCTTATATCGAGCACTCTATTTCCGGCATCAAATCGGGTATAAACCTCTCCTTCTCTCTTTTTCCTTCTCATAGTTCTTCTGATCCTGCTATTTAGTGGTTTTTATTTGATTTCAATGGGGGCATTTGGTCTTCTTTTTTTAATCTTCATCTTTTTGCAGCGTTCAGTAGTAAAGAGGTTGACAATTTTGTACCTAGCCCAAATACATGGTGGCGTGGAAGATCCTATGCTGCGTCTGTTGCTTCGGATATTCCTGGTCCCGAGAAAGATCGTAAAAGTGTCTCTATAGAAGATCGGCGAGCAATGGTCGAATCTTTTGTACACAAGTACTTTCTTGTTTTATCCTCATTTGAATTTTCCCGGTTGATTTCACTTTTTTTTTTCCTTTTTTCTGTTGACTGTGGCAAATGCTGGAAGTCTGTTCTGTATTATTCTATCTAATGAGTGAACAGTTCTGATTTTAGTAACTAAGAGCATGATCATGAAAAGAAATGTATACTGCATTTGTTACTACTGATTACTTCAAGGAATTGGCATGTGGTCCTATTATTCTTCTGTTGCAAAAGGTATTCATTGCTCATACTGATAATGCAACCTGGGAAAAGTAACAGATAAATGAAACTTTTTTTTCCTGCTTATCTTGTTTATGTTCAGAATGTTCCATCTTGCACTGTTCTACTTTGCTCACTGATCACTTGGGAACAATTTGATAGCTTTTGATAGCTTGGGAACAATTTGATAGCTTTTGAAGGTTTTAATCATCCTCAGTAGTAAGCTTCACTTTGTCTGTCAGTTTGAAGAGATAATGCATTTGTTTCTATTTTGCTTCTCTTTTTGTTGTCTGCTGGCGAACAAGTTTGTTAAAACGCATCTTACACTTTCTTGTTAATTTGTATTTTGGTCGGTCAATACTTCACTATTCCTAATGCAGGTACAAGGCATCAAATAATGGGAAATTCCCTCCGATATCACATACTCTGAAACAAGTAGGTGGCTCTTTTTATGTTGTTAGGAAAATCCTTCAGGAGCTTCAGAATGAATCTGCAACGTCGTCCTTAAAATGTAGAAGTAAAAAGTCATTTCAAGAAACGGAAATCAAAGGTAATGGAAGTTTAACTGAAGGTGAAATTTCTACCAGAAGTATTTTCAGTTTTTACTTTTTAAAAGGTTTTTGCGCCCAAGAGTGAGGCTCACTTTTCTTTTCCTGGAGTCTCTTGCCTTCTTTAGATCATAAGAGACTTATGCCTCCATCGGTTTACCACATTCTTAAAAACTATAAATTTCACTCGTGTATTTAATGATAATGCACCTTGAGTTGGTTTACTACTTCTATCACTAATGTTCAAAGAAATACTGAATAGAAAGAGAGAAATAGTAGAATCGTGATTTTATTTATGATAATGATGAGAATATTGAAAATAACAAAATAGTAGAAAGAGTGATGTACTGTGATATGATAATCAGGGAAGGAAGGCATGTGGAGAAGGAAATTTTCAAAATTATGGTTCAAGCTAAAGTAAGAAAAGGATAAAGCTCCAACGGAGCAAGAAAACCAAGGAGACGTGGAATAATCAACATGAGGTTGAACTCTGGAAGTCTTACCAAGTAAGAAGAGATCCCTGCTTTTTCCCTTAAACCGTACCAACACCTCTCTTACCATATGCAACACAAAGACTTCCATTCTCATCCTTTTGGATTACTTTACCTTAAAGTTGTGCTTCTCTTGAAAAATTCATTCGTGAAGATTACTGCCATCAAAGGGAGGTAATTGTGGCTTCCTTTGAATAATCGGAAGTTCTCTTCCCTCATTTTCCTGACCTCATTGGATCCATTGGCTTCACCTCCTTCCTCTCAATCCATTTGTCCCTTTACTTTCACAGCCACTAAAATTTTTGTTAGGTTTAATGTTTCCTTGTGGTGTTCATTCCTTGACATTTACAGGATGGAGCCCTGATACCAATTGATGTAGTAAAATAAGATACTAGTGTATTAGGAAAAGAAGGTACAATTCTTGGACTCTGAGGTCTGAATTTCTCCCTTAATAGGTTAATTCCAAATATACCTATTTTATGCTTACTTCTTTACTTTACTTGTATAGTTCCCTGACAAACTACCCGTATGACATCCACACTACCCTTCTGTACAAAGACACCCTTCCAACCATAAACTAACTTCTCATGCTAAACACCCCATGCCTTCATCCTTGCATATGTAAACTTAACTTAAATTGGAGGCTTACTGATTCTATCAATAACTATTTGAATATTTATTTAAGAAAATGACCATTGAGATTTTCTTTTCCTTTAATACTTTTATTTAATGATAATGTTGAGTAATGGCTCGCATTTTTATGACTTTGATTAACAAAAAGGATAATTCTATTTTATTTTTTAAAATTTTACTTCTCATTATTACCAAGCACACAAAAATGTATTATTGATATTATCTTGATGCCTATATATTATCCTATTCACAGTAGATTGAGTATTCATTTCTCTAGACTGAAACACACAATTTTGGGGTGTTTTCCAGTGCTTAATACATGTTTCTCTAGTCAGCTTTCAGAACAAAAAAAGAAAAAAAAAATGGTTTACTTCTCATTATCTTAAAATTTTCTCTCCTTCATTTTTTAAAGCTCAAGTCCACCTTTTTAATATAGAGTATACTATTGTTTTGAGTTCAACAACAAGAACTATTGTCATTGGATGATTATTCATGATGCAGAGAACCCTAATGTTGGTGGCAAACATTTGGAAGCAGCATCTGATTGGCAAAAGTCCTCTTGTGCTGAGAAGATCTTGTCTGCTGATGATGATGTAAGCTTGCAACTCGTAAGTTTTATCTGTCATAATCATAACAAGTATTTGTACCCAATTTGGAGATGGAATTTACCTTGTTCTCTTGAGAAAGTTGTAAGGCTATGATCTAGTTTAGGACCTTATTGGTGGATTCACTTCGTTAATGGTGTTACAGCGTGCATCAAAAGGGTTGTAAGAGGACATTTAGATGCCATCTCGTCATTTGCATGTTGATTTTCACATAAGTGGTATATTTTTAAAAATGGAAAACAAGGTTACGATTGAACATGTTAGTCTATCAAGAGAAACAATTGGAGAGCTCTTCGTTTTTCTTTTAAACAGCGAACTAATTTCATTAAAAGTGCTAAATTACTTTACAATATGTGTATATGCTGTGTTTTTGTAGGAATTAGCGATGAACTGAGGGTGTTATTTTACTGGATCAAACTATTTTAAATTAATTTTCGTTTGAGGATATAATCTTATCAAGGAAACTCCCTATTCTGAATTAAGTATTGCAGTTTTCATTTTTACTTTAGTCCAGAATTATTTTGGAAATGATATAAATGATACAAACTGTCTTCTATCTCACACAACCATATAACAATAATTTTAAAGGGACTTCCATAATTCTTTTTATTAGATCATAAATGTTATCACTGGTTGAAGGCCTCCGGTGTTATGTCTTTCAGCTAATTGATTTTTGTAATTGCAAACAGGTTAGCCGTTCTGTCCTTCCATTGAGAAGCAATCTTTTGGAGGACTCCGAGGAAGTTATTTCTTCTCATAAGAAACCAGATGATGATGATAAAGAGTTGGACACTTCTGATCATGTTTGTACTGATAGCCATGTACCAAAAAATGAACGAGATGTGGTTTCTGATGTTCAACTTGAAAGTAGATCTTCATCTGAAGAGCTGAAGCGTGAAGGTCCAAATGGTAAAGAGCAACAAGTTCAGAGCTCTTTTGAATTACACAGGTTTGTTCACCTTATTCATATTGGATTAGATGGGTGTTCCACTAACACCTTTTCCTTTTTATTTCCTTGATGTCCAATCGTGTTACTGCTATTAATCCACCAGGCCCACATGATTTTTGATTTTTTGGGGGAAATTTTCAATTGAATCAATTTAAACTCTGAACTAATAATTGTAACAATTTTAACTACACCCTTCTTCATATTTAGTTTGAAAAATATCATGCGAGACATTTAATTTTTTCAATTGAACTTCTAAATTTTTATAAGTGAATCAATTTAGAACTTTTATTATATTTGAAAATTGTTAATGCATTCAATTTTTAAACATGCATATACTTCTTCAGATATTTTCTCCCTTTTTTTTCCCTCCCGATGGTTCTTTCCATTCTTTTTTAAAGTTCTCCTGGCTGCTTAAATGGTTCCTGCAATCCATCTATTTTCCAGGGAGAACATTAACAATAGGACAGTGGATGAGGCTCAGGTTACAACAATTGAATCAAAACCATGGGGAGAACGTATCAAGTCAATTGTAGATGGTATGGTGAACCTGTGGAGGAAACTTTAAATCTTTCTGGTAAGTGTTAATCAGAGCTTGTAAATATATTGTCTTCACACCGGTTAGGGATAATGTCTCTGTCTAATATATGAAACTAGTCCTTTTTGATTGGCTGTTTATTCCCTTGAGTAATCTTTTTTCAGTTTCTAGTCTTTTACTTTATGATTATTTCTACATTTGAAACAAATTTTCCAGAGACTCTTATTTGAAATTTCCATAGGTGGGAATATGGTTACTTTAATGTTGAAAAGGAGGGTGGGTTTAGGCTTCCAAACTGTTGCTGTAATTGTTTTGAAATGAAATCACATAATGTGTTTGATGATTAAA TGAAAAAGCATTTAAAACTAAAATTGAAACTGGGAAGCGAGGAAGAATACACTAAAACCCTGGGGAGGGCGTTCTTCCCTCCTCCACTCTCCTCTTCTTTCTACTCCGATGGACTGAAGAACAGCAATCTATGGTGAAAATGAAGATTAAGCTTCTTGCTAGAAGACGATTACACTCCTACTCTTATATCGAGCACTCTATTTCCGGCATCAAATCGGCGTTCAGTAGTAAAGAGGTTGACAATTTTGTACCTAGCCCAAATACATGGTGGCGTGGAAGATCCTATGCTGCGTCTGTTGCTTCGGATATTCCTGGTCCCGAGAAAGATCGTAAAAGTGTCTCTATAGAAGATCGGCGAGCAATGGTCGAATCTTTTGTACACAAGTACAAGGCATCAAATAATGGGAAATTCCCTCCGATATCACATACTCTGAAACAAGTAGGTGGCTCTTTTTATGTTGTTAGGAAAATCCTTCAGGAGCTTCAGAATGAATCTGCAACGTCGTCCTTAAAATGTAGAAGTAAAAAGTCATTTCAAGAAACGGAAATCAAAGGTAATGGAAGTTTAACTGAAGGTGAAATTTCTACCAGAAAGAACCCTAATGTTGGTGGCAAACATTTGGAAGCAGCATCTGATTGGCAAAAGTCCTCTTGTGCTGAGAAGATCTTGTCTGCTGATGATGATGTAAGCTTGCAACTCGTTAGCCGTTCTGTCCTTCCATTGAGAAGCAATCTTTTGGAGGACTCCGAGGAAGTTATTTCTTCTCATAAGAAACCAGATGATGATGATAAAGAGTTGGACACTTCTGATCATGTTTGTACTGATAGCCATGTACCAAAAAATGAACGAGATGTGGTTTCTGATGTTCAACTTGAAAGTAGATCTTCATCTGAAGAGCTGAAGCGTGAAGGTCCAAATGGTAAAGAGCAACAAGTTCAGAGCTCTTTTGAATTACACAGGGAGAACATTAACAATAGGACAGTGGATGAGGCTCAGGTTACAACAATTGAATCAAAACCATGGGGAGAACGTATCAAGTCAATTGTAGATGGTATGGTGAACCTGTGGAGGAAACTTTAAATCTTTCTGGTAAGTGTTAATCAGAGCTTGTAAATATATTGTCTTCACACCGGTTAGGGATAATGTCTCTGTCTAATATATGAAACTAGTCCTTTTTGATTGGCTGTTTATTCCCTTGAGTAATCTTTTTTCAGTTTCTAGTCTTTTACTTTATGATTATTTCTACATTTGAAACAAATTTTCCAGAGACTCTTATTTGAAATTTCCATAGGTGGGAATATGGTTACTTTAATGTTGAAAAGGAGGGTGGGTTTAGGCTTCCAAACTGTTGCTGTAATTGTTTTGAAATGAAATCACATAATGTGTTTGATGATTAAA ATGGTGAAAATGAAGATTAAGCTTCTTGCTAGAAGACGATTACACTCCTACTCTTATATCGAGCACTCTATTTCCGGCATCAAATCGGCGTTCAGTAGTAAAGAGGTTGACAATTTTGTACCTAGCCCAAATACATGGTGGCGTGGAAGATCCTATGCTGCGTCTGTTGCTTCGGATATTCCTGGTCCCGAGAAAGATCGTAAAAGTGTCTCTATAGAAGATCGGCGAGCAATGGTCGAATCTTTTGTACACAAGTACAAGGCATCAAATAATGGGAAATTCCCTCCGATATCACATACTCTGAAACAAGTAGGTGGCTCTTTTTATGTTGTTAGGAAAATCCTTCAGGAGCTTCAGAATGAATCTGCAACGTCGTCCTTAAAATGTAGAAGTAAAAAGTCATTTCAAGAAACGGAAATCAAAGGTAATGGAAGTTTAACTGAAGGTGAAATTTCTACCAGAAAGAACCCTAATGTTGGTGGCAAACATTTGGAAGCAGCATCTGATTGGCAAAAGTCCTCTTGTGCTGAGAAGATCTTGTCTGCTGATGATGATGTAAGCTTGCAACTCGTTAGCCGTTCTGTCCTTCCATTGAGAAGCAATCTTTTGGAGGACTCCGAGGAAGTTATTTCTTCTCATAAGAAACCAGATGATGATGATAAAGAGTTGGACACTTCTGATCATGTTTGTACTGATAGCCATGTACCAAAAAATGAACGAGATGTGGTTTCTGATGTTCAACTTGAAAGTAGATCTTCATCTGAAGAGCTGAAGCGTGAAGGTCCAAATGGTAAAGAGCAACAAGTTCAGAGCTCTTTTGAATTACACAGGGAGAACATTAACAATAGGACAGTGGATGAGGCTCAGGTTACAACAATTGAATCAAAACCATGGGGAGAACGTATCAAGTCAATTGTAGATGGTATGGTGAACCTGTGGAGGAAACTTTAA MVKMKIKLLARRRLHSYSYIEHSISGIKSAFSSKEVDNFVPSPNTWWRGRSYAASVASDIPGPEKDRKSVSIEDRRAMVESFVHKYKASNNGKFPPISHTLKQVGGSFYVVRKILQELQNESATSSLKCRSKKSFQETEIKGNGSLTEGEISTRKNPNVGGKHLEAASDWQKSSCAEKILSADDDVSLQLVSRSVLPLRSNLLEDSEEVISSHKKPDDDDKELDTSDHVCTDSHVPKNERDVVSDVQLESRSSSEELKREGPNGKEQQVQSSFELHRENINNRTVDEAQVTTIESKPWGERIKSIVDGMVNLWRKL Homology
BLAST of CaUC03G051640 vs. NCBI nr
Match: XP_038894557.1 (uncharacterized protein LOC120083086 isoform X1 [Benincasa hispida]) HSP 1 Score: 472.2 bits (1214), Expect = 3.4e-129 Identity = 253/315 (80.32%), Postives = 273/315 (86.67%), Query Frame = 0
BLAST of CaUC03G051640 vs. NCBI nr
Match: XP_038894559.1 (uncharacterized protein LOC120083086 isoform X2 [Benincasa hispida]) HSP 1 Score: 458.4 bits (1178), Expect = 5.1e-125 Identity = 248/315 (78.73%), Postives = 268/315 (85.08%), Query Frame = 0
BLAST of CaUC03G051640 vs. NCBI nr
Match: XP_022970550.1 (uncharacterized protein LOC111469494 [Cucurbita maxima]) HSP 1 Score: 425.6 bits (1093), Expect = 3.7e-115 Identity = 234/318 (73.58%), Postives = 260/318 (81.76%), Query Frame = 0
BLAST of CaUC03G051640 vs. NCBI nr
Match: KAG7019205.1 (hypothetical protein SDJN02_18163 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 425.2 bits (1092), Expect = 4.8e-115 Identity = 236/325 (72.62%), Postives = 264/325 (81.23%), Query Frame = 0
BLAST of CaUC03G051640 vs. NCBI nr
Match: XP_004152907.1 (uncharacterized protein LOC101209410 [Cucumis sativus] >XP_011658023.1 uncharacterized protein LOC101209410 [Cucumis sativus] >KGN65696.1 hypothetical protein Csa_020100 [Cucumis sativus]) HSP 1 Score: 423.7 bits (1088), Expect = 1.4e-114 Identity = 235/316 (74.37%), Postives = 258/316 (81.65%), Query Frame = 0
BLAST of CaUC03G051640 vs. ExPASy TrEMBL
Match: A0A6J1I365 (uncharacterized protein LOC111469494 OS=Cucurbita maxima OX=3661 GN=LOC111469494 PE=4 SV=1) HSP 1 Score: 425.6 bits (1093), Expect = 1.8e-115 Identity = 234/318 (73.58%), Postives = 260/318 (81.76%), Query Frame = 0
BLAST of CaUC03G051640 vs. ExPASy TrEMBL
Match: A0A0A0M0E7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G502350 PE=4 SV=1) HSP 1 Score: 423.7 bits (1088), Expect = 6.7e-115 Identity = 235/316 (74.37%), Postives = 258/316 (81.65%), Query Frame = 0
BLAST of CaUC03G051640 vs. ExPASy TrEMBL
Match: A0A6J1HKG5 (uncharacterized protein LOC111464933 OS=Cucurbita moschata OX=3662 GN=LOC111464933 PE=4 SV=1) HSP 1 Score: 422.5 bits (1085), Expect = 1.5e-114 Identity = 232/318 (72.96%), Postives = 259/318 (81.45%), Query Frame = 0
BLAST of CaUC03G051640 vs. ExPASy TrEMBL
Match: A0A5A7SRN1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00160 PE=4 SV=1) HSP 1 Score: 417.5 bits (1072), Expect = 4.8e-113 Identity = 228/315 (72.38%), Postives = 251/315 (79.68%), Query Frame = 0
BLAST of CaUC03G051640 vs. ExPASy TrEMBL
Match: A0A1S3C592 (uncharacterized protein LOC103497179 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497179 PE=4 SV=1) HSP 1 Score: 417.5 bits (1072), Expect = 4.8e-113 Identity = 228/315 (72.38%), Postives = 251/315 (79.68%), Query Frame = 0
BLAST of CaUC03G051640 vs. TAIR 10
Match: AT5G58210.3 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 67.0 bits (162), Expect = 3.1e-11 Identity = 40/108 (37.04%), Postives = 60/108 (55.56%), Query Frame = 0
BLAST of CaUC03G051640 vs. TAIR 10
Match: AT5G58210.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 67.0 bits (162), Expect = 3.1e-11 Identity = 40/108 (37.04%), Postives = 60/108 (55.56%), Query Frame = 0
BLAST of CaUC03G051640 vs. TAIR 10
Match: AT5G58210.2 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 67.0 bits (162), Expect = 3.1e-11 Identity = 40/108 (37.04%), Postives = 60/108 (55.56%), Query Frame = 0
BLAST of CaUC03G051640 vs. TAIR 10
Match: AT5G58210.4 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 67.0 bits (162), Expect = 3.1e-11 Identity = 40/108 (37.04%), Postives = 60/108 (55.56%), Query Frame = 0
BLAST of CaUC03G051640 vs. TAIR 10
Match: AT3G52170.1 (DNA binding ) HSP 1 Score: 61.6 bits (148), Expect = 1.3e-09 Identity = 35/105 (33.33%), Postives = 62/105 (59.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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