CaUC03G051460 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC03G051460
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	RING-type domain-containing protein
Location	Ciama_Chr03: 1605852 .. 1606301 (-)
RNA-Seq Expression	CaUC03G051460
Synteny	CaUC03G051460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATCGCCGCCGTTTGTCGCCGCTTCACCGGCACCAATCAGAGTTGTCGCCGCCACTTTTGAACTGACTTTGGAGGATAAGTATTTGGCTGGGACAGTCATTTTCACCTTTATTATTCTATACTTCATCGCCTTCAGTTACTACTACAAAACCAGAAATAATGAATCAGAATCCGCCATTGCGGCGGCCGGACCATTGCCGGCGTTGCGGGAGCCGGAGATTGTAAAGATTGAGGCCATGGTTTTCAGTTACAAGGAAGCTAGGGGAAGTGAGAATGATGATTATGAATGTGTGATTTGCTTGAACCAATTTAAAGAAGGCCAAAAGTGTCGATTGATGAAAAAGTGTGGCCATAGATTTCACCGGAGCTGCATCGACCGGTGGCTCATGGTGGAACAACAATGCCCGCTTTGCCGGAGCTGCGTTTGCGTCGTTGTAAAACCATAA

mRNA sequence

ATGTCATCGCCGCCGTTTGTCGCCGCTTCACCGGCACCAATCAGAGTTGTCGCCGCCACTTTTGAACTGACTTTGGAGGATAAGTATTTGGCTGGGACAGTCATTTTCACCTTTATTATTCTATACTTCATCGCCTTCAGTTACTACTACAAAACCAGAAATAATGAATCAGAATCCGCCATTGCGGCGGCCGGACCATTGCCGGCGTTGCGGGAGCCGGAGATTGTAAAGATTGAGGCCATGGTTTTCAGTTACAAGGAAGCTAGGGGAAGTGAGAATGATGATTATGAATGTGTGATTTGCTTGAACCAATTTAAAGAAGGCCAAAAGTGTCGATTGATGAAAAAGTGTGGCCATAGATTTCACCGGAGCTGCATCGACCGGTGGCTCATGGTGGAACAACAATGCCCGCTTTGCCGGAGCTGCGTTTGCGTCGTTGTAAAACCATAA

Coding sequence (CDS)

ATGTCATCGCCGCCGTTTGTCGCCGCTTCACCGGCACCAATCAGAGTTGTCGCCGCCACTTTTGAACTGACTTTGGAGGATAAGTATTTGGCTGGGACAGTCATTTTCACCTTTATTATTCTATACTTCATCGCCTTCAGTTACTACTACAAAACCAGAAATAATGAATCAGAATCCGCCATTGCGGCGGCCGGACCATTGCCGGCGTTGCGGGAGCCGGAGATTGTAAAGATTGAGGCCATGGTTTTCAGTTACAAGGAAGCTAGGGGAAGTGAGAATGATGATTATGAATGTGTGATTTGCTTGAACCAATTTAAAGAAGGCCAAAAGTGTCGATTGATGAAAAAGTGTGGCCATAGATTTCACCGGAGCTGCATCGACCGGTGGCTCATGGTGGAACAACAATGCCCGCTTTGCCGGAGCTGCGTTTGCGTCGTTGTAAAACCATAA

Protein sequence

MSSPPFVAASPAPIRVVAATFELTLEDKYLAGTVIFTFIILYFIAFSYYYKTRNNESESAIAAAGPLPALREPEIVKIEAMVFSYKEARGSENDDYECVICLNQFKEGQKCRLMKKCGHRFHRSCIDRWLMVEQQCPLCRSCVCVVVKP

Homology

[Close]

BLAST of CaUC03G051460 vs. NCBI nr
Match: XP_004151032.1 (RING-H2 finger protein ATL66 [Cucumis sativus])

HSP 1 Score: 173.7 bits (439), Expect = 1.2e-39
Identity = 91/152 (59.87%), Postives = 110/152 (72.37%), Query Frame = 0


Query: 1   MSSPPFVAASPAPIRVVAATFELTLEDKYLAGTVIFTFIILYFIAFSYYYKTRNNESE-S 60
           MS PP++AASP P       FE   +D  L   + F  II+YF++F++Y+KT NNESE  
Sbjct: 1   MSPPPYIAASPMPTN----GFEAIFDDFELLAAICFA-IIVYFLSFTFYFKTGNNESEFD 60

Query: 61  AIAAAGPLPALREPEIVKIEAMVFS-YKEARGSEN-DDYECVICLNQFKEGQKCRLMKKC 120
                  LP  RE EIV+IE MVFS Y+EA+GSEN DDYECVICLN+F++GQKC+ MKKC
Sbjct: 61  TGTVEDRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKC 120

Query: 121 GHRFHRSCIDRWLMVEQQCPLCRSCVCVVVKP 150
           GH FH SCIDRWL  E++CPLCRSCVCVVV P
Sbjct: 121 GHIFHCSCIDRWLRTERECPLCRSCVCVVVNP 147

[Close]

BLAST of CaUC03G051460 vs. NCBI nr
Match: XP_008457571.1 (PREDICTED: RING-H2 finger protein ATL66-like [Cucumis melo] >TYJ97408.1 RING-H2 finger protein ATL66-like [Cucumis melo var. makuwa])

HSP 1 Score: 171.0 bits (432), Expect = 7.7e-39
Identity = 92/163 (56.44%), Postives = 112/163 (68.71%), Query Frame = 0


Query: 1   MSSPPFVAASPAPIRVVAATFELTLEDKYLAGTVIFTFIILYFIAFSYYYKTRNNE---S 60
           MSSP ++AASP P+  + A F     D Y     I   II+YFI+F+ Y+KT NN+    
Sbjct: 1   MSSPAYIAASPMPMNGIEALF-----DDYDVVAAICFAIIVYFISFTLYFKTGNNDYQSD 60

Query: 61  ESAIAAAGPLPALRE------PEIVKIEAMVFSYKEARGSEN-----DDYECVICLNQFK 120
           +S +     LPA RE       EIV+IEAMVFSY+EA+ SEN     DDYECVICLN+F+
Sbjct: 61  QSDVGTVEELPAFRERVVRDQQEIVQIEAMVFSYREAKRSENDDDDDDDYECVICLNKFE 120

Query: 121 EGQKCRLMKKCGHRFHRSCIDRWLMVEQQCPLCRSCVCVVVKP 150
           + QKCR MKKCGH FHRSCIDRWL  E++CPLCR+CVCVVVKP
Sbjct: 121 DAQKCRWMKKCGHIFHRSCIDRWLKTERECPLCRTCVCVVVKP 158

[Close]

BLAST of CaUC03G051460 vs. NCBI nr
Match: KAA0067735.1 (RING-H2 finger protein ATL66-like [Cucumis melo var. makuwa])

HSP 1 Score: 170.6 bits (431), Expect = 1.0e-38
Identity = 92/164 (56.10%), Postives = 112/164 (68.29%), Query Frame = 0


Query: 1   MSSPPFVAASPAPIRVVAATFELTLEDKYLAGTVIFTFIILYFIAFSYYYKTRNNE---S 60
           MSSP ++AASP P+  + A F     D Y     I   II+YFI+F+ Y+KT NN+    
Sbjct: 1   MSSPAYIAASPMPMNGIEALF-----DDYDVVAAICFAIIVYFISFTLYFKTGNNDYQSD 60

Query: 61  ESAIAAAGPLPALRE------PEIVKIEAMVFSYKEARGSEN------DDYECVICLNQF 120
           +S +     LPA RE       EIV+IEAMVFSY+EA+ SEN      DDYECVICLN+F
Sbjct: 61  QSDVGTVEELPAFRERVVRDQQEIVQIEAMVFSYREAKRSENDDDDDDDDYECVICLNKF 120

Query: 121 KEGQKCRLMKKCGHRFHRSCIDRWLMVEQQCPLCRSCVCVVVKP 150
           ++ QKCR MKKCGH FHRSCIDRWL  E++CPLCR+CVCVVVKP
Sbjct: 121 EDAQKCRWMKKCGHIFHRSCIDRWLKTERECPLCRTCVCVVVKP 159

[Close]

BLAST of CaUC03G051460 vs. NCBI nr
Match: XP_023524567.1 (RING-H2 finger protein ATL56-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 157.9 bits (398), Expect = 6.7e-35
Identity = 83/149 (55.70%), Postives = 99/149 (66.44%), Query Frame = 0


Query: 1   MSSPPFVAASPAPIRVVAATFELTLEDKYLAGTVIFTFIILYFIAFSYYYKTRNNESESA 60
           M SPP  AASP PI  +  T+ L   +  LA   I   IILY I  +++     +E ES 
Sbjct: 1   MPSPPSFAASPPPISAIVETYGLRWTNNNLAVIAICFLIILYLILLNFF----KSELESG 60

Query: 61  IAAAGPLPALREPEIVKIEAMVFSYKEARGSENDDYECVICLNQFKEGQKCRLMKKCGHR 120
              AG LP +REPEIV+IEA VFSYKEA G  +D  EC ICL++F++ QKCR M KCGH 
Sbjct: 61  SDPAGALPVVREPEIVRIEASVFSYKEADGGHDD--ECAICLDEFEDAQKCRKMNKCGHI 120

Query: 121 FHRSCIDRWLMVEQQCPLCRSCVCVVVKP 150
           FHR CIDRWL V++ CPLCRSCVCVVV P
Sbjct: 121 FHRRCIDRWLKVDRHCPLCRSCVCVVVHP 143

[Close]

BLAST of CaUC03G051460 vs. NCBI nr
Match: XP_022998666.1 (RING-H2 finger protein ATL56-like [Cucurbita maxima])

HSP 1 Score: 156.8 bits (395), Expect = 1.5e-34
Identity = 82/149 (55.03%), Postives = 99/149 (66.44%), Query Frame = 0


Query: 1   MSSPPFVAASPAPIRVVAATFELTLEDKYLAGTVIFTFIILYFIAFSYYYKTRNNESESA 60
           M  PP  AASP PI  +  T+ L   +  LA   I   IILY I  +++     +E ES 
Sbjct: 1   MPLPPSFAASPPPISAIVKTYGLRWTNNNLALIAICFLIILYLILLNFF----KSELESG 60

Query: 61  IAAAGPLPALREPEIVKIEAMVFSYKEARGSENDDYECVICLNQFKEGQKCRLMKKCGHR 120
              AG LP +REPEIV+IEA VFSY+EA G  +D  EC ICL++F++GQKCR M KCGH 
Sbjct: 61  SEPAGALPVVREPEIVRIEASVFSYREADGGHDD--ECAICLDEFEDGQKCRKMNKCGHI 120

Query: 121 FHRSCIDRWLMVEQQCPLCRSCVCVVVKP 150
           FHR CIDRWL V++ CPLCRSCVCVVV P
Sbjct: 121 FHRRCIDRWLKVDRHCPLCRSCVCVVVHP 143

[Close]

BLAST of CaUC03G051460 vs. ExPASy Swiss-Prot
Match: Q9M0R7 (RING-H2 finger protein ATL39 OS=Arabidopsis thaliana OX=3702 GN=ATL39 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.5e-13
Identity = 46/122 (37.70%), Postives = 65/122 (53.28%), Query Frame = 0


Query: 32  GTVIFTFIILYFIAF---SYYY-KTRNNESESAIAAAGPLPALREPEIVKIEAM----VF 91
           GT++F F  + FIAF   +YY  + RN  + +       +   R P  +  EA+     F
Sbjct: 9   GTIVFAFASIGFIAFYIINYYIRRCRNRAAAAGDIEEARMSPRRPPRGLDAEAIKSFPSF 68

Query: 92  SYKEARGSEN--DDYECVICLNQFKEGQKCRLMKKCGHRFHRSCIDRWLMVEQQCPLCRS 144
            Y EARG E    + ECV+CLN+FK+ +  RL+  C H FH  C+D WL     CP+CR+
Sbjct: 69  VYTEARGIEPGIGELECVVCLNEFKDDETLRLVPPCVHVFHADCVDIWLSHSSTCPICRA 128

[Close]

BLAST of CaUC03G051460 vs. ExPASy Swiss-Prot
Match: Q940Q4 (RING-H2 finger protein ATL13 OS=Arabidopsis thaliana OX=3702 GN=ATL13 PE=2 SV=2)

HSP 1 Score: 72.0 bits (175), Expect = 6.4e-12
Identity = 29/60 (48.33%), Postives = 37/60 (61.67%), Query Frame = 0


Query: 82  VFSYKEARGSENDDYECVICLNQFKEGQKCRLMKKCGHRFHRSCIDRWLMVEQQCPLCRS 141
           VF YK   G +N  ++C +CL +F+   K RL+ KC H FH  CID WL+    CPLCRS
Sbjct: 118 VFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCRS 177

[Close]

BLAST of CaUC03G051460 vs. ExPASy Swiss-Prot
Match: Q9LX93 (E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana OX=3702 GN=ATL55 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 6.4e-12
Identity = 30/68 (44.12%), Postives = 44/68 (64.71%), Query Frame = 0


Query: 82  VFSYKEARGSENDDYECVICLNQFKEGQKCRLMKKCGHRFHRSCIDRWLMVEQQCPLCRS 141
           V  +K+  G   D  EC +CLN+F+E +  RL+ KC H FH +CID WL+  + CPLCR+
Sbjct: 120 VVGFKKGEGI-IDGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRA 179

Query: 142 CVCVVVKP 150
            V ++ +P
Sbjct: 180 PVLLITEP 186

[Close]

BLAST of CaUC03G051460 vs. ExPASy Swiss-Prot
Match: Q9M0C3 (RING-H2 finger protein ATL14 OS=Arabidopsis thaliana OX=3702 GN=ATL14 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.2e-11
Identity = 43/131 (32.82%), Postives = 63/131 (48.09%), Query Frame = 0


Query: 13  PIRVVAATFELTLEDKYLAGTVIFTFIILYFIAFSYYYKTRNNESESAIAAAGPLPALRE 72
           P+ + A  F LT     L  T  F F   +F+  +Y ++ R +          P    R 
Sbjct: 45  PVAITAFIFILT----SLGFTFFFAF--YWFLQRNYRHRLRRHRRHEYSDGLSPRCVKRL 104

Query: 73  PEIVKIEAMVFSYKEARGSENDDYECVICLNQFKEGQKCRLMKKCGHRFHRSCIDRWLMV 132
           P+        F Y E   SE    +CV+C++ F++GQ CR + +CGH FHR C+D WL+ 
Sbjct: 105 PQ--------FKYCEP-SSEYGGDDCVVCIDGFRQGQWCRKLPRCGHVFHRKCVDLWLIK 160

Query: 133 EQQCPLCRSCV 144
              CP+CR  V
Sbjct: 165 VSTCPICRDRV 160

[Close]

BLAST of CaUC03G051460 vs. ExPASy Swiss-Prot
Match: Q8GW38 (RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.2e-11
Identity = 28/59 (47.46%), Postives = 38/59 (64.41%), Query Frame = 0


Query: 82  VFSYKEARGSENDDYECVICLNQFKEGQKCRLMKKCGHRFHRSCIDRWLMVEQQCPLCR 141
           VF YKE +G++ + ++C +CL +F E  K RL+  C H FH  CID WL+    CPLCR
Sbjct: 129 VFLYKEIKGTK-EPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCR 186

[Close]

BLAST of CaUC03G051460 vs. ExPASy TrEMBL
Match: A0A0A0LXE1 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G515480 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 5.7e-40
Identity = 91/152 (59.87%), Postives = 110/152 (72.37%), Query Frame = 0


Query: 1   MSSPPFVAASPAPIRVVAATFELTLEDKYLAGTVIFTFIILYFIAFSYYYKTRNNESE-S 60
           MS PP++AASP P       FE   +D  L   + F  II+YF++F++Y+KT NNESE  
Sbjct: 1   MSPPPYIAASPMPTN----GFEAIFDDFELLAAICFA-IIVYFLSFTFYFKTGNNESEFD 60

Query: 61  AIAAAGPLPALREPEIVKIEAMVFS-YKEARGSEN-DDYECVICLNQFKEGQKCRLMKKC 120
                  LP  RE EIV+IE MVFS Y+EA+GSEN DDYECVICLN+F++GQKC+ MKKC
Sbjct: 61  TGTVEDRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKC 120

Query: 121 GHRFHRSCIDRWLMVEQQCPLCRSCVCVVVKP 150
           GH FH SCIDRWL  E++CPLCRSCVCVVV P
Sbjct: 121 GHIFHCSCIDRWLRTERECPLCRSCVCVVVNP 147

[Close]

BLAST of CaUC03G051460 vs. ExPASy TrEMBL
Match: A0A5D3BGV5 (RING-H2 finger protein ATL66-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G002280 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 3.7e-39
Identity = 92/163 (56.44%), Postives = 112/163 (68.71%), Query Frame = 0


Query: 1   MSSPPFVAASPAPIRVVAATFELTLEDKYLAGTVIFTFIILYFIAFSYYYKTRNNE---S 60
           MSSP ++AASP P+  + A F     D Y     I   II+YFI+F+ Y+KT NN+    
Sbjct: 1   MSSPAYIAASPMPMNGIEALF-----DDYDVVAAICFAIIVYFISFTLYFKTGNNDYQSD 60

Query: 61  ESAIAAAGPLPALRE------PEIVKIEAMVFSYKEARGSEN-----DDYECVICLNQFK 120
           +S +     LPA RE       EIV+IEAMVFSY+EA+ SEN     DDYECVICLN+F+
Sbjct: 61  QSDVGTVEELPAFRERVVRDQQEIVQIEAMVFSYREAKRSENDDDDDDDYECVICLNKFE 120

Query: 121 EGQKCRLMKKCGHRFHRSCIDRWLMVEQQCPLCRSCVCVVVKP 150
           + QKCR MKKCGH FHRSCIDRWL  E++CPLCR+CVCVVVKP
Sbjct: 121 DAQKCRWMKKCGHIFHRSCIDRWLKTERECPLCRTCVCVVVKP 158

[Close]

BLAST of CaUC03G051460 vs. ExPASy TrEMBL
Match: A0A1S3C6H7 (RING-H2 finger protein ATL66-like OS=Cucumis melo OX=3656 GN=LOC103497236 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 3.7e-39
Identity = 92/163 (56.44%), Postives = 112/163 (68.71%), Query Frame = 0


Query: 1   MSSPPFVAASPAPIRVVAATFELTLEDKYLAGTVIFTFIILYFIAFSYYYKTRNNE---S 60
           MSSP ++AASP P+  + A F     D Y     I   II+YFI+F+ Y+KT NN+    
Sbjct: 1   MSSPAYIAASPMPMNGIEALF-----DDYDVVAAICFAIIVYFISFTLYFKTGNNDYQSD 60

Query: 61  ESAIAAAGPLPALRE------PEIVKIEAMVFSYKEARGSEN-----DDYECVICLNQFK 120
           +S +     LPA RE       EIV+IEAMVFSY+EA+ SEN     DDYECVICLN+F+
Sbjct: 61  QSDVGTVEELPAFRERVVRDQQEIVQIEAMVFSYREAKRSENDDDDDDDYECVICLNKFE 120

Query: 121 EGQKCRLMKKCGHRFHRSCIDRWLMVEQQCPLCRSCVCVVVKP 150
           + QKCR MKKCGH FHRSCIDRWL  E++CPLCR+CVCVVVKP
Sbjct: 121 DAQKCRWMKKCGHIFHRSCIDRWLKTERECPLCRTCVCVVVKP 158

[Close]

BLAST of CaUC03G051460 vs. ExPASy TrEMBL
Match: A0A5A7VPW6 (RING-H2 finger protein ATL66-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00550 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 4.8e-39
Identity = 92/164 (56.10%), Postives = 112/164 (68.29%), Query Frame = 0


Query: 1   MSSPPFVAASPAPIRVVAATFELTLEDKYLAGTVIFTFIILYFIAFSYYYKTRNNE---S 60
           MSSP ++AASP P+  + A F     D Y     I   II+YFI+F+ Y+KT NN+    
Sbjct: 1   MSSPAYIAASPMPMNGIEALF-----DDYDVVAAICFAIIVYFISFTLYFKTGNNDYQSD 60

Query: 61  ESAIAAAGPLPALRE------PEIVKIEAMVFSYKEARGSEN------DDYECVICLNQF 120
           +S +     LPA RE       EIV+IEAMVFSY+EA+ SEN      DDYECVICLN+F
Sbjct: 61  QSDVGTVEELPAFRERVVRDQQEIVQIEAMVFSYREAKRSENDDDDDDDDYECVICLNKF 120

Query: 121 KEGQKCRLMKKCGHRFHRSCIDRWLMVEQQCPLCRSCVCVVVKP 150
           ++ QKCR MKKCGH FHRSCIDRWL  E++CPLCR+CVCVVVKP
Sbjct: 121 EDAQKCRWMKKCGHIFHRSCIDRWLKTERECPLCRTCVCVVVKP 159

[Close]

BLAST of CaUC03G051460 vs. ExPASy TrEMBL
Match: A0A6J1KAT3 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111493250 PE=3 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 7.2e-35
Identity = 82/149 (55.03%), Postives = 99/149 (66.44%), Query Frame = 0


Query: 1   MSSPPFVAASPAPIRVVAATFELTLEDKYLAGTVIFTFIILYFIAFSYYYKTRNNESESA 60
           M  PP  AASP PI  +  T+ L   +  LA   I   IILY I  +++     +E ES 
Sbjct: 1   MPLPPSFAASPPPISAIVKTYGLRWTNNNLALIAICFLIILYLILLNFF----KSELESG 60

Query: 61  IAAAGPLPALREPEIVKIEAMVFSYKEARGSENDDYECVICLNQFKEGQKCRLMKKCGHR 120
              AG LP +REPEIV+IEA VFSY+EA G  +D  EC ICL++F++GQKCR M KCGH 
Sbjct: 61  SEPAGALPVVREPEIVRIEASVFSYREADGGHDD--ECAICLDEFEDGQKCRKMNKCGHI 120

Query: 121 FHRSCIDRWLMVEQQCPLCRSCVCVVVKP 150
           FHR CIDRWL V++ CPLCRSCVCVVV P
Sbjct: 121 FHRRCIDRWLKVDRHCPLCRSCVCVVVHP 143

[Close]

BLAST of CaUC03G051460 vs. TAIR 10
Match: AT4G09100.1 (RING/U-box superfamily protein )

HSP 1 Score: 77.4 bits (189), Expect = 1.1e-14
Identity = 46/122 (37.70%), Postives = 65/122 (53.28%), Query Frame = 0


Query: 32  GTVIFTFIILYFIAF---SYYY-KTRNNESESAIAAAGPLPALREPEIVKIEAM----VF 91
           GT++F F  + FIAF   +YY  + RN  + +       +   R P  +  EA+     F
Sbjct: 9   GTIVFAFASIGFIAFYIINYYIRRCRNRAAAAGDIEEARMSPRRPPRGLDAEAIKSFPSF 68

Query: 92  SYKEARGSEN--DDYECVICLNQFKEGQKCRLMKKCGHRFHRSCIDRWLMVEQQCPLCRS 144
            Y EARG E    + ECV+CLN+FK+ +  RL+  C H FH  C+D WL     CP+CR+
Sbjct: 69  VYTEARGIEPGIGELECVVCLNEFKDDETLRLVPPCVHVFHADCVDIWLSHSSTCPICRA 128

[Close]

BLAST of CaUC03G051460 vs. TAIR 10
Match: AT4G30400.1 (RING/U-box superfamily protein )

HSP 1 Score: 72.0 bits (175), Expect = 4.5e-13
Identity = 29/60 (48.33%), Postives = 37/60 (61.67%), Query Frame = 0


Query: 82  VFSYKEARGSENDDYECVICLNQFKEGQKCRLMKKCGHRFHRSCIDRWLMVEQQCPLCRS 141
           VF YK   G +N  ++C +CL +F+   K RL+ KC H FH  CID WL+    CPLCRS
Sbjct: 118 VFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCRS 177

[Close]

BLAST of CaUC03G051460 vs. TAIR 10
Match: AT5G10380.1 (RING/U-box superfamily protein )

HSP 1 Score: 72.0 bits (175), Expect = 4.5e-13
Identity = 30/68 (44.12%), Postives = 44/68 (64.71%), Query Frame = 0


Query: 82  VFSYKEARGSENDDYECVICLNQFKEGQKCRLMKKCGHRFHRSCIDRWLMVEQQCPLCRS 141
           V  +K+  G   D  EC +CLN+F+E +  RL+ KC H FH +CID WL+  + CPLCR+
Sbjct: 120 VVGFKKGEGI-IDGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRA 179

Query: 142 CVCVVVKP 150
            V ++ +P
Sbjct: 180 PVLLITEP 186

[Close]

BLAST of CaUC03G051460 vs. TAIR 10
Match: AT1G23980.1 (RING/U-box superfamily protein )

HSP 1 Score: 69.7 bits (169), Expect = 2.2e-12
Identity = 28/59 (47.46%), Postives = 38/59 (64.41%), Query Frame = 0


Query: 82  VFSYKEARGSENDDYECVICLNQFKEGQKCRLMKKCGHRFHRSCIDRWLMVEQQCPLCR 141
           VF YKE +G++ + ++C +CL +F E  K RL+  C H FH  CID WL+    CPLCR
Sbjct: 129 VFLYKEIKGTK-EPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCR 186

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BLAST of CaUC03G051460 vs. TAIR 10
Match: AT4G30370.1 (RING/U-box superfamily protein )

HSP 1 Score: 69.7 bits (169), Expect = 2.2e-12
Identity = 43/131 (32.82%), Postives = 63/131 (48.09%), Query Frame = 0


Query: 13  PIRVVAATFELTLEDKYLAGTVIFTFIILYFIAFSYYYKTRNNESESAIAAAGPLPALRE 72
           P+ + A  F LT     L  T  F F   +F+  +Y ++ R +          P    R 
Sbjct: 45  PVAITAFIFILT----SLGFTFFFAF--YWFLQRNYRHRLRRHRRHEYSDGLSPRCVKRL 104

Query: 73  PEIVKIEAMVFSYKEARGSENDDYECVICLNQFKEGQKCRLMKKCGHRFHRSCIDRWLMV 132
           P+        F Y E   SE    +CV+C++ F++GQ CR + +CGH FHR C+D WL+ 
Sbjct: 105 PQ--------FKYCEP-SSEYGGDDCVVCIDGFRQGQWCRKLPRCGHVFHRKCVDLWLIK 160

Query: 133 EQQCPLCRSCV 144
              CP+CR  V
Sbjct: 165 VSTCPICRDRV 160

The following BLAST results are available for this feature:

BLAST of CaUC03G051460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004151032.1	1.2e-39	59.87	RING-H2 finger protein ATL66 [Cucumis sativus]	[more]
XP_008457571.1	7.7e-39	56.44	PREDICTED: RING-H2 finger protein ATL66-like [Cucumis melo] >TYJ97408.1 RING-H2 ...	[more]
KAA0067735.1	1.0e-38	56.10	RING-H2 finger protein ATL66-like [Cucumis melo var. makuwa]	[more]
XP_023524567.1	6.7e-35	55.70	RING-H2 finger protein ATL56-like [Cucurbita pepo subsp. pepo]	[more]
XP_022998666.1	1.5e-34	55.03	RING-H2 finger protein ATL56-like [Cucurbita maxima]	[more]

BLAST of CaUC03G051460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M0R7	1.5e-13	37.70	RING-H2 finger protein ATL39 OS=Arabidopsis thaliana OX=3702 GN=ATL39 PE=2 SV=1	[more]
Q940Q4	6.4e-12	48.33	RING-H2 finger protein ATL13 OS=Arabidopsis thaliana OX=3702 GN=ATL13 PE=2 SV=2	[more]
Q9LX93	6.4e-12	44.12	E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana OX=3702 GN=ATL55 PE=1 ...	[more]
Q9M0C3	3.2e-11	32.82	RING-H2 finger protein ATL14 OS=Arabidopsis thaliana OX=3702 GN=ATL14 PE=2 SV=1	[more]
Q8GW38	3.2e-11	47.46	RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1	[more]

BLAST of CaUC03G051460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXE1	5.7e-40	59.87	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G515480 P...	[more]
A0A5D3BGV5	3.7e-39	56.44	RING-H2 finger protein ATL66-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3C6H7	3.7e-39	56.44	RING-H2 finger protein ATL66-like OS=Cucumis melo OX=3656 GN=LOC103497236 PE=4 S...	[more]
A0A5A7VPW6	4.8e-39	56.10	RING-H2 finger protein ATL66-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A6J1KAT3	7.2e-35	55.03	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111493250 P...	[more]

BLAST of CaUC03G051460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G09100.1	1.1e-14	37.70	RING/U-box superfamily protein	[more]
AT4G30400.1	4.5e-13	48.33	RING/U-box superfamily protein	[more]
AT5G10380.1	4.5e-13	44.12	RING/U-box superfamily protein	[more]
AT1G23980.1	2.2e-12	47.46	RING/U-box superfamily protein	[more]
AT4G30370.1	2.2e-12	32.82	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 98..139 e-value: 1.2E-7 score: 41.4
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 97..140 e-value: 2.8E-14 score: 53.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 98..140 score: 13.13841
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 66..144 e-value: 1.1E-19 score: 71.8
None	No IPR available	PANTHER	PTHR14155:SF550	RING-H2 FINGER PROTEIN ATL40	coord: 29..142
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 29..142
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 90..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC03G051460.1	CaUC03G051460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane