CaUC03G051450 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC03G051450
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	RING-type E3 ubiquitin transferase
Location	Ciama_Chr03: 1599422 .. 1599889 (+)
RNA-Seq Expression	CaUC03G051450
Synteny	CaUC03G051450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATTCCTGTTGGTAGGCGTGATTATTCTCGTCGTATTTTTATTCATCTTCCTTTTTCATTACTACCAATACCAACTTAGGCTGTACCAAACAAGAACCCTAGACATCGAGCAACGACTCCATGAAAATCATGCAGCACGACTCTTTGCTCGGCTTCAAGCCGAAATTATACGGCAACAGCAGGCAGCGCAACCAAACGCAGCGGAGCATGAAGAAACCTCCTCGGCTACCATGACGGTCGCTTACAAAGACGTGATCAAGACGTGGGACAAAGCCGATTGCTGTGCCATTTGCATTGAAGGGTTTGAGGAGGAAGAGATTTGTGGAGTTGTTGAGAGTTGTGGCCATTGTTTTCATAAGGATTGTATAGACCAATGGCTGAGGATTGAGAGACGTTGCCCATTGTGCCGCTGTATGGTTCATGTTGTATCTCAGAATAATAACTCCCAAGAAAATCAAGCTTAG

mRNA sequence

ATGGGATTCCTGTTGGTAGGCGTGATTATTCTCGTCGTATTTTTATTCATCTTCCTTTTTCATTACTACCAATACCAACTTAGGCTGTACCAAACAAGAACCCTAGACATCGAGCAACGACTCCATGAAAATCATGCAGCACGACTCTTTGCTCGGCTTCAAGCCGAAATTATACGGCAACAGCAGGCAGCGCAACCAAACGCAGCGGAGCATGAAGAAACCTCCTCGGCTACCATGACGGTCGCTTACAAAGACGTGATCAAGACGTGGGACAAAGCCGATTGCTGTGCCATTTGCATTGAAGGGTTTGAGGAGGAAGAGATTTGTGGAGTTGTTGAGAGTTGTGGCCATTGTTTTCATAAGGATTGTATAGACCAATGGCTGAGGATTGAGAGACGTTGCCCATTGTGCCGCTGTATGGTTCATGTTGTATCTCAGAATAATAACTCCCAAGAAAATCAAGCTTAG

Coding sequence (CDS)

ATGGGATTCCTGTTGGTAGGCGTGATTATTCTCGTCGTATTTTTATTCATCTTCCTTTTTCATTACTACCAATACCAACTTAGGCTGTACCAAACAAGAACCCTAGACATCGAGCAACGACTCCATGAAAATCATGCAGCACGACTCTTTGCTCGGCTTCAAGCCGAAATTATACGGCAACAGCAGGCAGCGCAACCAAACGCAGCGGAGCATGAAGAAACCTCCTCGGCTACCATGACGGTCGCTTACAAAGACGTGATCAAGACGTGGGACAAAGCCGATTGCTGTGCCATTTGCATTGAAGGGTTTGAGGAGGAAGAGATTTGTGGAGTTGTTGAGAGTTGTGGCCATTGTTTTCATAAGGATTGTATAGACCAATGGCTGAGGATTGAGAGACGTTGCCCATTGTGCCGCTGTATGGTTCATGTTGTATCTCAGAATAATAACTCCCAAGAAAATCAAGCTTAG

Protein sequence

MGFLLVGVIILVVFLFIFLFHYYQYQLRLYQTRTLDIEQRLHENHAARLFARLQAEIIRQQQAAQPNAAEHEETSSATMTVAYKDVIKTWDKADCCAICIEGFEEEEICGVVESCGHCFHKDCIDQWLRIERRCPLCRCMVHVVSQNNNSQENQA

Homology

[Close]

BLAST of CaUC03G051450 vs. NCBI nr
Match: KAA0067736.1 (RING-H2 finger protein ATL52-like [Cucumis melo var. makuwa])

HSP 1 Score: 179.9 bits (455), Expect = 1.7e-41
Identity = 99/151 (65.56%), Postives = 114/151 (75.50%), Query Frame = 0


Query: 1   MGFLLVGVIILVVFLFIFLFHYYQYQLRLYQTRTLDIEQRLHENHAARLFARLQAEIIRQ 60
           MGFL V V+ ++  L IFLFH Y Y+LRL QTRTLDIEQRLHE+   +L A+ QAEIIRQ
Sbjct: 1   MGFLFVSVVCII--LIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQ 60

Query: 61  QQAA--QPNAAEHEETSSATMTVAYKDVIKTWDKAD---CCAICIEGFEEEEICGVVESC 120
           +Q      +  E EETSSA MTVAYK  +K  +      CCAICIE FE+EEICGVVESC
Sbjct: 61  RQTTTQSNDTTEGEETSSAVMTVAYK--VKDNEAGGSYCCCAICIEEFEDEEICGVVESC 120

Query: 121 GHCFHKDCIDQWLRIERRCPLCRCMVHVVSQ 147
           GHCFH+DC+DQWLRIE RCPLCRC+VH VSQ
Sbjct: 121 GHCFHEDCMDQWLRIESRCPLCRCLVHAVSQ 147

[Close]

BLAST of CaUC03G051450 vs. NCBI nr
Match: TYJ97407.1 (RING-H2 finger protein ATL52-like [Cucumis melo var. makuwa])

HSP 1 Score: 177.6 bits (449), Expect = 8.5e-41
Identity = 98/151 (64.90%), Postives = 113/151 (74.83%), Query Frame = 0


Query: 1   MGFLLVGVIILVVFLFIFLFHYYQYQLRLYQTRTLDIEQRLHENHAARLFARLQAEIIRQ 60
           MGFL V V+ ++  L IFLFH Y Y+LRL QTRTLDIEQRLHE+   +L A+ QAEIIRQ
Sbjct: 1   MGFLFVSVVCII--LIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQ 60

Query: 61  QQAA--QPNAAEHEETSSATMTVAYKDVIKTWDKAD---CCAICIEGFEEEEICGVVESC 120
           +Q      +  E EETSSA M VAYK  +K  +      CCAICIE FE+EEICGVVESC
Sbjct: 61  RQTTTQSNDTTEGEETSSAVMKVAYK--VKDNEAGGSYCCCAICIEEFEDEEICGVVESC 120

Query: 121 GHCFHKDCIDQWLRIERRCPLCRCMVHVVSQ 147
           GHCFH+DC+DQWLRIE RCPLCRC+VH VSQ
Sbjct: 121 GHCFHEDCMDQWLRIESRCPLCRCLVHAVSQ 147

[Close]

BLAST of CaUC03G051450 vs. NCBI nr
Match: XP_022970384.1 (RING-H2 finger protein ATL64-like [Cucurbita maxima])

HSP 1 Score: 170.2 bits (430), Expect = 1.4e-38
Identity = 93/157 (59.24%), Postives = 113/157 (71.97%), Query Frame = 0


Query: 1   MGFLLVGVIILVVFLFIFLFHYYQYQLRLYQTRTLDIEQRLHENHAARLFARLQAEIIRQ 60
           MG +++G I ++VFL IF+F  Y  +  LYQTR LD+EQ    NHA RLFAR +AE++RQ
Sbjct: 6   MGLMVLGAIAIIVFLPIFMFRCYHNRFMLYQTRALDVEQ---TNHATRLFARFRAEVMRQ 65

Query: 61  QQA-----AQPNAAEHEETSSATMTVAYKDV--IKTWDKADCCAICIEGFEEEEICGVVE 120
           QQ+      +PN AE EE +S    VAY+D+   K  D  DCCAICIEGFEEEEICGVV+
Sbjct: 66  QQSIAVPPPRPNTAE-EEAASIVTKVAYRDIKPTKEADSDDCCAICIEGFEEEEICGVVD 125

Query: 121 SCGHCFHKDCIDQWLRIERRCPLCRCMVHVVSQNNNS 151
            C HCFHK CID+WL I  RCPLCRC+V VVS+NNNS
Sbjct: 126 GCDHCFHKVCIDKWLGIVSRCPLCRCLVRVVSENNNS 158

[Close]

BLAST of CaUC03G051450 vs. NCBI nr
Match: KAG6583431.1 (RING-H2 finger protein ATL5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 167.9 bits (424), Expect = 6.7e-38
Identity = 95/158 (60.13%), Postives = 114/158 (72.15%), Query Frame = 0


Query: 1   MGFLLVGVIILVVFLFIFLFHYYQYQLRLYQTRTLDIEQRLHENHAARLFARLQAEIIRQ 60
           MG +++  I ++VFL IF+F  Y   L  YQTR LD+EQ    NHA RLFAR +AE +RQ
Sbjct: 10  MGVIVLSAIAIIVFLSIFMFRCYHNHLMQYQTRALDVEQ---TNHATRLFARFRAEFMRQ 69

Query: 61  QQA-----AQPNAAEHEETSSATMTVAYKDVIKTWDKA---DCCAICIEGFEEEEICGVV 120
           QQ+      + N AE EE +S    VAYKD IKT ++A   DCCAICIEGF+EEEICGV+
Sbjct: 70  QQSIVAPPPRSNTAE-EEAASIVTKVAYKD-IKTTEEADSDDCCAICIEGFQEEEICGVL 129

Query: 121 ESCGHCFHKDCIDQWLRIERRCPLCRCMVHVVSQNNNS 151
           + CGHCFHK CIDQWL IE RCPLCRC+V VVS+NNNS
Sbjct: 130 DRCGHCFHKVCIDQWLGIESRCPLCRCLVRVVSENNNS 162

[Close]

BLAST of CaUC03G051450 vs. NCBI nr
Match: KAG7019192.1 (E3 ubiquitin-protein ligase ATL42, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 166.4 bits (420), Expect = 2.0e-37
Identity = 94/158 (59.49%), Postives = 113/158 (71.52%), Query Frame = 0


Query: 1   MGFLLVGVIILVVFLFIFLFHYYQYQLRLYQTRTLDIEQRLHENHAARLFARLQAEIIRQ 60
           MG +++  I + VFL IF+F  Y   L  YQTR LD+EQ    NHA RLFAR +AE +RQ
Sbjct: 164 MGLIVLSAIAITVFLSIFMFRCYHNHLMQYQTRALDVEQ---TNHATRLFARFRAEFMRQ 223

Query: 61  QQA-----AQPNAAEHEETSSATMTVAYKDVIKTWDKA---DCCAICIEGFEEEEICGVV 120
           QQ+      + N AE EE +S    VAYKD IKT ++A   DCCAICIEGF+EEE+CGV+
Sbjct: 224 QQSIVAPPPRSNTAE-EEAASIVTKVAYKD-IKTTEEADSDDCCAICIEGFQEEELCGVL 283

Query: 121 ESCGHCFHKDCIDQWLRIERRCPLCRCMVHVVSQNNNS 151
           + CGHCFHK CIDQWL IE RCPLCRC+V VVS+NNNS
Sbjct: 284 DRCGHCFHKVCIDQWLGIESRCPLCRCLVRVVSENNNS 316

[Close]

BLAST of CaUC03G051450 vs. ExPASy Swiss-Prot
Match: Q9SRM0 (RING-H2 finger protein ATL66 OS=Arabidopsis thaliana OX=3702 GN=ATL66 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.4e-09
Identity = 33/107 (30.84%), Postives = 54/107 (50.47%), Query Frame = 0


Query: 41  LHENHAARLFARLQAEIIRQQQAAQPNAAEHEETSSATMTVAYKDVIKTWDKADCCAICI 100
           +H N   R    L A    +    +    +  E  S  + +  ++  +  ++ +CC IC+
Sbjct: 53  IHRNCLPRDSINLHASSPDRLTRCRSGGLDPAEIRSLPVVLCRRERAEEEEEKECC-ICL 112

Query: 101 EGFEEEEICGVVESCGHCFHKDCIDQWLRIERRCPLCRCMVHVVSQN 148
            GFEE E   V+  C HC+H +C+D+WL+ E  CPLCR  + V S +
Sbjct: 113 GGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPLCRVSIRVDSSS 158

[Close]

BLAST of CaUC03G051450 vs. ExPASy Swiss-Prot
Match: Q9FL42 (Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana OX=3702 GN=ATL69 PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 4.4e-08
Identity = 21/43 (48.84%), Postives = 27/43 (62.79%), Query Frame = 0


Query: 96  CAICIEGFEEEEICGVVESCGHCFHKDCIDQWLRIERRCPLCR 139
           C+IC+  +E  E    +  C HCFH DC+D+WLR    CPLCR
Sbjct: 94  CSICLCDYEAREPVRCIPECNHCFHTDCVDEWLRTSATCPLCR 136

[Close]

BLAST of CaUC03G051450 vs. ExPASy Swiss-Prot
Match: Q9LSW9 (RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 7.6e-08
Identity = 21/46 (45.65%), Postives = 30/46 (65.22%), Query Frame = 0


Query: 96  CAICIEGFEEEEICGVVESCGHCFHKDCIDQWLRIERRCPLCRCMV 142
           C++C+  F++EE   ++ +C H FH DCID WL+    CPLCR  V
Sbjct: 138 CSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRV 183

[Close]

BLAST of CaUC03G051450 vs. ExPASy Swiss-Prot
Match: Q8AWW4 (E3 ubiquitin-protein ligase RNF128 OS=Xenopus laevis OX=8355 GN=rnf128 PE=2 SV=2)

HSP 1 Score: 58.2 bits (139), Expect = 9.9e-08
Identity = 25/58 (43.10%), Postives = 36/58 (62.07%), Query Frame = 0


Query: 87  IKTWDK-----ADCCAICIEGFEEEEICGVVESCGHCFHKDCIDQWLRIERRCPLCRC 140
           IK  DK      D CA+CIE ++  ++  ++ +C H FHK+CID WL   R CP+C+C
Sbjct: 246 IKQGDKVLGPDGDSCAVCIEPYKPSDVVRIL-TCNHFFHKNCIDPWLLEHRTCPMCKC 302

[Close]

BLAST of CaUC03G051450 vs. ExPASy Swiss-Prot
Match: P87237 (Uncharacterized RING finger protein C4G3.12c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC4G3.12c PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 9.9e-08
Identity = 30/76 (39.47%), Postives = 41/76 (53.95%), Query Frame = 0


Query: 64  AQPNAAEHEETSSATMTVAYKDVIKTWDKADCCAICIEGFEEEEICGVVESCGHCFHKDC 123
           A+   A HE+   +    AY D   +   AD C IC+E +   +IC  +++C H FH+ C
Sbjct: 735 AKKPVASHEDVKRSGGLFAYFD-DASLSSADSCLICLETYTNGDICRKLQACKHFFHQAC 794

Query: 124 IDQWLRI-ERRCPLCR 139
           IDQWL      CPLCR
Sbjct: 795 IDQWLTTGNNSCPLCR 809

[Close]

BLAST of CaUC03G051450 vs. ExPASy TrEMBL
Match: A0A5A7VMH1 (RING-H2 finger protein ATL52-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00560 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 8.3e-42
Identity = 99/151 (65.56%), Postives = 114/151 (75.50%), Query Frame = 0


Query: 1   MGFLLVGVIILVVFLFIFLFHYYQYQLRLYQTRTLDIEQRLHENHAARLFARLQAEIIRQ 60
           MGFL V V+ ++  L IFLFH Y Y+LRL QTRTLDIEQRLHE+   +L A+ QAEIIRQ
Sbjct: 1   MGFLFVSVVCII--LIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQ 60

Query: 61  QQAA--QPNAAEHEETSSATMTVAYKDVIKTWDKAD---CCAICIEGFEEEEICGVVESC 120
           +Q      +  E EETSSA MTVAYK  +K  +      CCAICIE FE+EEICGVVESC
Sbjct: 61  RQTTTQSNDTTEGEETSSAVMTVAYK--VKDNEAGGSYCCCAICIEEFEDEEICGVVESC 120

Query: 121 GHCFHKDCIDQWLRIERRCPLCRCMVHVVSQ 147
           GHCFH+DC+DQWLRIE RCPLCRC+VH VSQ
Sbjct: 121 GHCFHEDCMDQWLRIESRCPLCRCLVHAVSQ 147

[Close]

BLAST of CaUC03G051450 vs. ExPASy TrEMBL
Match: A0A5D3BE50 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G002270 PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 4.1e-41
Identity = 98/151 (64.90%), Postives = 113/151 (74.83%), Query Frame = 0


Query: 1   MGFLLVGVIILVVFLFIFLFHYYQYQLRLYQTRTLDIEQRLHENHAARLFARLQAEIIRQ 60
           MGFL V V+ ++  L IFLFH Y Y+LRL QTRTLDIEQRLHE+   +L A+ QAEIIRQ
Sbjct: 1   MGFLFVSVVCII--LIIFLFHIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEIIRQ 60

Query: 61  QQAA--QPNAAEHEETSSATMTVAYKDVIKTWDKAD---CCAICIEGFEEEEICGVVESC 120
           +Q      +  E EETSSA M VAYK  +K  +      CCAICIE FE+EEICGVVESC
Sbjct: 61  RQTTTQSNDTTEGEETSSAVMKVAYK--VKDNEAGGSYCCCAICIEEFEDEEICGVVESC 120

Query: 121 GHCFHKDCIDQWLRIERRCPLCRCMVHVVSQ 147
           GHCFH+DC+DQWLRIE RCPLCRC+VH VSQ
Sbjct: 121 GHCFHEDCMDQWLRIESRCPLCRCLVHAVSQ 147

[Close]

BLAST of CaUC03G051450 vs. ExPASy TrEMBL
Match: A0A6J1I5C3 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111469386 PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 6.6e-39
Identity = 93/157 (59.24%), Postives = 113/157 (71.97%), Query Frame = 0


Query: 1   MGFLLVGVIILVVFLFIFLFHYYQYQLRLYQTRTLDIEQRLHENHAARLFARLQAEIIRQ 60
           MG +++G I ++VFL IF+F  Y  +  LYQTR LD+EQ    NHA RLFAR +AE++RQ
Sbjct: 6   MGLMVLGAIAIIVFLPIFMFRCYHNRFMLYQTRALDVEQ---TNHATRLFARFRAEVMRQ 65

Query: 61  QQA-----AQPNAAEHEETSSATMTVAYKDV--IKTWDKADCCAICIEGFEEEEICGVVE 120
           QQ+      +PN AE EE +S    VAY+D+   K  D  DCCAICIEGFEEEEICGVV+
Sbjct: 66  QQSIAVPPPRPNTAE-EEAASIVTKVAYRDIKPTKEADSDDCCAICIEGFEEEEICGVVD 125

Query: 121 SCGHCFHKDCIDQWLRIERRCPLCRCMVHVVSQNNNS 151
            C HCFHK CID+WL I  RCPLCRC+V VVS+NNNS
Sbjct: 126 GCDHCFHKVCIDKWLGIVSRCPLCRCLVRVVSENNNS 158

[Close]

BLAST of CaUC03G051450 vs. ExPASy TrEMBL
Match: A0A6J1HJU0 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111464742 PE=3 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 1.1e-36
Identity = 95/158 (60.13%), Postives = 114/158 (72.15%), Query Frame = 0


Query: 1   MGFLLVGVIILVVFLFIFLFHYYQYQLRLYQTRTLDIEQRLHENHAARLFARLQAEIIRQ 60
           MG +++  I ++VFL IF+F  Y   L  YQTR LD+EQ    NHA RLFAR +AE ++Q
Sbjct: 6   MGLIVLSAIAIIVFLPIFMFRCYHNHLMQYQTRALDVEQ---TNHATRLFARFRAEFMQQ 65

Query: 61  QQ--AAQP---NAAEHEETSSATMTVAYKDVIKTWDKADC---CAICIEGFEEEEICGVV 120
           QQ  AA P   N AE EE +S    VAY+D IKT ++AD    CAICIEGFEEEEICGV+
Sbjct: 66  QQSIAAPPPRSNTAE-EEAASIVTKVAYRD-IKTTEEADVDDYCAICIEGFEEEEICGVL 125

Query: 121 ESCGHCFHKDCIDQWLRIERRCPLCRCMVHVVSQNNNS 151
           + CGHCFHK CIDQWLRI  RCPLCRC++ VVS+NNNS
Sbjct: 126 DRCGHCFHKVCIDQWLRIGSRCPLCRCLIRVVSENNNS 158

[Close]

BLAST of CaUC03G051450 vs. ExPASy TrEMBL
Match: A0A1S4E1K2 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC107991538 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 2.0e-27
Identity = 68/104 (65.38%), Postives = 78/104 (75.00%), Query Frame = 0


Query: 48  RLFARLQAEIIRQQQAA--QPNAAEHEETSSATMTVAYKDVIKTWDKAD---CCAICIEG 107
           +L A+ QAEIIRQ+Q      +  E EETSSA M VAYK  +K  +      CCAICIE 
Sbjct: 2   QLLAQTQAEIIRQRQTTTQSNDTTEGEETSSAVMKVAYK--VKDNEAGGSYCCCAICIEE 61

Query: 108 FEEEEICGVVESCGHCFHKDCIDQWLRIERRCPLCRCMVHVVSQ 147
           FE+EEICGVVESCGHCFH+DC+DQWLRIE RCPLCRC+VH VSQ
Sbjct: 62  FEDEEICGVVESCGHCFHEDCMDQWLRIESRCPLCRCLVHAVSQ 103

[Close]

BLAST of CaUC03G051450 vs. TAIR 10
Match: AT3G11110.1 (RING/U-box superfamily protein )

HSP 1 Score: 64.3 bits (155), Expect = 9.8e-11
Identity = 33/107 (30.84%), Postives = 54/107 (50.47%), Query Frame = 0


Query: 41  LHENHAARLFARLQAEIIRQQQAAQPNAAEHEETSSATMTVAYKDVIKTWDKADCCAICI 100
           +H N   R    L A    +    +    +  E  S  + +  ++  +  ++ +CC IC+
Sbjct: 53  IHRNCLPRDSINLHASSPDRLTRCRSGGLDPAEIRSLPVVLCRRERAEEEEEKECC-ICL 112

Query: 101 EGFEEEEICGVVESCGHCFHKDCIDQWLRIERRCPLCRCMVHVVSQN 148
            GFEE E   V+  C HC+H +C+D+WL+ E  CPLCR  + V S +
Sbjct: 113 GGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPLCRVSIRVDSSS 158

[Close]

BLAST of CaUC03G051450 vs. TAIR 10
Match: AT5G53110.1 (RING/U-box superfamily protein )

HSP 1 Score: 61.2 bits (147), Expect = 8.3e-10
Identity = 21/43 (48.84%), Postives = 29/43 (67.44%), Query Frame = 0


Query: 96  CAICIEGFEEEEICGVVESCGHCFHKDCIDQWLRIERRCPLCR 139
           CAIC+  +E +E    +  C HCFH DCID+WL++   CP+CR
Sbjct: 330 CAICLSEYEPKETLRTIPQCQHCFHADCIDEWLKLNGTCPVCR 372

[Close]

BLAST of CaUC03G051450 vs. TAIR 10
Match: AT5G07040.1 (RING/U-box superfamily protein )

HSP 1 Score: 59.3 bits (142), Expect = 3.1e-09
Identity = 21/43 (48.84%), Postives = 27/43 (62.79%), Query Frame = 0


Query: 96  CAICIEGFEEEEICGVVESCGHCFHKDCIDQWLRIERRCPLCR 139
           C+IC+  +E  E    +  C HCFH DC+D+WLR    CPLCR
Sbjct: 94  CSICLCDYEAREPVRCIPECNHCFHTDCVDEWLRTSATCPLCR 136

[Close]

BLAST of CaUC03G051450 vs. TAIR 10
Match: AT5G43420.1 (RING/U-box superfamily protein )

HSP 1 Score: 58.5 bits (140), Expect = 5.4e-09
Identity = 21/46 (45.65%), Postives = 30/46 (65.22%), Query Frame = 0


Query: 96  CAICIEGFEEEEICGVVESCGHCFHKDCIDQWLRIERRCPLCRCMV 142
           C++C+  F++EE   ++ +C H FH DCID WL+    CPLCR  V
Sbjct: 138 CSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRV 183

[Close]

BLAST of CaUC03G051450 vs. TAIR 10
Match: AT2G44581.1 (RING/U-box superfamily protein )

HSP 1 Score: 58.2 bits (139), Expect = 7.0e-09
Identity = 24/53 (45.28%), Postives = 29/53 (54.72%), Query Frame = 0


Query: 96  CAICIEGFEEEEICGVVESCGHCFHKDCIDQWLRIERRCPLCRCMVHVVSQNN 149
           C IC+E   E E    + +C HCFH DCID WL  +  CPLCR  +  V   N
Sbjct: 70  CTICLENATEGEKMRRIAACSHCFHVDCIDPWLEKKSMCPLCRAEIPPVPPGN 122

The following BLAST results are available for this feature:

BLAST of CaUC03G051450 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067736.1	1.7e-41	65.56	RING-H2 finger protein ATL52-like [Cucumis melo var. makuwa]	[more]
TYJ97407.1	8.5e-41	64.90	RING-H2 finger protein ATL52-like [Cucumis melo var. makuwa]	[more]
XP_022970384.1	1.4e-38	59.24	RING-H2 finger protein ATL64-like [Cucurbita maxima]	[more]
KAG6583431.1	6.7e-38	60.13	RING-H2 finger protein ATL5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7019192.1	2.0e-37	59.49	E3 ubiquitin-protein ligase ATL42, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CaUC03G051450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRM0	1.4e-09	30.84	RING-H2 finger protein ATL66 OS=Arabidopsis thaliana OX=3702 GN=ATL66 PE=2 SV=1	[more]
Q9FL42	4.4e-08	48.84	Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana OX=3702 GN=ATL69 P...	[more]
Q9LSW9	7.6e-08	45.65	RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1	[more]
Q8AWW4	9.9e-08	43.10	E3 ubiquitin-protein ligase RNF128 OS=Xenopus laevis OX=8355 GN=rnf128 PE=2 SV=2	[more]
P87237	9.9e-08	39.47	Uncharacterized RING finger protein C4G3.12c OS=Schizosaccharomyces pombe (strai...	[more]

BLAST of CaUC03G051450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VMH1	8.3e-42	65.56	RING-H2 finger protein ATL52-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3BE50	4.1e-41	64.90	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A6J1I5C3	6.6e-39	59.24	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111469386 P...	[more]
A0A6J1HJU0	1.1e-36	60.13	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111464742...	[more]
A0A1S4E1K2	2.0e-27	65.38	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC107991538 PE=3 ...	[more]

BLAST of CaUC03G051450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G11110.1	9.8e-11	30.84	RING/U-box superfamily protein	[more]
AT5G53110.1	8.3e-10	48.84	RING/U-box superfamily protein	[more]
AT5G07040.1	3.1e-09	48.84	RING/U-box superfamily protein	[more]
AT5G43420.1	5.4e-09	45.65	RING/U-box superfamily protein	[more]
AT2G44581.1	7.0e-09	45.28	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 96..137 e-value: 5.7E-5 score: 32.5
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 95..138 e-value: 1.1E-11 score: 44.9
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 96..138 score: 13.212175
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 54..143 e-value: 5.2E-17 score: 63.3
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 8..139
None	No IPR available	PANTHER	PTHR14155:SF550	RING-H2 FINGER PROTEIN ATL40	coord: 8..139
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 95..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC03G051450.1	CaUC03G051450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane