CaUC03G051420 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC03G051420
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	RING-H2 finger protein ATL14-like
Location	Ciama_Chr03: 1590748 .. 1591248 (-)
RNA-Seq Expression	CaUC03G051420
Synteny	CaUC03G051420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCACCATCTCCTCTGCCGTTGCCGGAATCCACAAGACGGCCAAATCCGCCGCCGCCGATCCATCCCATTGGGTTTCACCTTACGACCAGATTAACATTCGCAAGCGGCTTGATGTTGGTGGCAGTGATTTGTGGTCTAATGATTTCGTTTATGTTCATTTTTCATTACTATTACCATCAACGCCTCAGAGTAGTGGAGGAGGACACCGAATCAAGGCAAGTATCGGGAGGTGTGGCGGGGGTTGGAGGGCGGCAGGAGACGGCGGAGGAAATTCCGGTGGCCGCGATGATGGGTTTCAGAGAAATAAAAACAGAGGAAATTGGGGATTGTGATGGGAGGAGGTGTGCGATATGTATTGAAGGATTTGGGGAGGAAGAGATTTGTGGAGTAATTGAGAATTGCGGACATGTTTTTCATAAGGATTGTATTAATCGGTGGCTTAGAATTAAGAACCGTTGCCCACTTTGCCGCTGCTTTGTTCATAGGTTTTTGTGA

mRNA sequence

ATGTCTTCACCATCTCCTCTGCCGTTGCCGGAATCCACAAGACGGCCAAATCCGCCGCCGCCGATCCATCCCATTGGGTTTCACCTTACGACCAGATTAACATTCGCAAGCGGCTTGATGTTGGTGGCAGTGATTTGTGGTCTAATGATTTCGTTTATGTTCATTTTTCATTACTATTACCATCAACGCCTCAGAGTAGTGGAGGAGGACACCGAATCAAGGCAAGTATCGGGAGGTGTGGCGGGGGTTGGAGGGCGGCAGGAGACGGCGGAGGAAATTCCGGTGGCCGCGATGATGGGTTTCAGAGAAATAAAAACAGAGGAAATTGGGGATTGTGATGGGAGGAGGTGTGCGATATGTATTGAAGGATTTGGGGAGGAAGAGATTTGTGGAGTAATTGAGAATTGCGGACATGTTTTTCATAAGGATTGTATTAATCGGTGGCTTAGAATTAAGAACCGTTGCCCACTTTGCCGCTGCTTTGTTCATAGGTTTTTGTGA

Coding sequence (CDS)

ATGTCTTCACCATCTCCTCTGCCGTTGCCGGAATCCACAAGACGGCCAAATCCGCCGCCGCCGATCCATCCCATTGGGTTTCACCTTACGACCAGATTAACATTCGCAAGCGGCTTGATGTTGGTGGCAGTGATTTGTGGTCTAATGATTTCGTTTATGTTCATTTTTCATTACTATTACCATCAACGCCTCAGAGTAGTGGAGGAGGACACCGAATCAAGGCAAGTATCGGGAGGTGTGGCGGGGGTTGGAGGGCGGCAGGAGACGGCGGAGGAAATTCCGGTGGCCGCGATGATGGGTTTCAGAGAAATAAAAACAGAGGAAATTGGGGATTGTGATGGGAGGAGGTGTGCGATATGTATTGAAGGATTTGGGGAGGAAGAGATTTGTGGAGTAATTGAGAATTGCGGACATGTTTTTCATAAGGATTGTATTAATCGGTGGCTTAGAATTAAGAACCGTTGCCCACTTTGCCGCTGCTTTGTTCATAGGTTTTTGTGA

Protein sequence

MSSPSPLPLPESTRRPNPPPPIHPIGFHLTTRLTFASGLMLVAVICGLMISFMFIFHYYYHQRLRVVEEDTESRQVSGGVAGVGGRQETAEEIPVAAMMGFREIKTEEIGDCDGRRCAICIEGFGEEEICGVIENCGHVFHKDCINRWLRIKNRCPLCRCFVHRFL

Homology

[Close]

BLAST of CaUC03G051420 vs. NCBI nr
Match: XP_031742489.1 (RING-H2 finger protein ATL1-like [Cucumis sativus] >KAE8653253.1 hypothetical protein Csa_019970 [Cucumis sativus])

HSP 1 Score: 248.4 bits (633), Expect = 4.2e-62
Identity = 126/163 (77.30%), Postives = 133/163 (81.60%), Query Frame = 0


Query: 1   MSSPSPLPLPESTRRPN-PPPPIHPIGFHLTTRLTFASGLMLVAVICGLMISFMFIFHYY 60
           MSSPSP P+PEST RP  PP PIH   FHLTTRLT ASGLMLVAVIC LMI FMFIFHY 
Sbjct: 1   MSSPSPPPVPESTTRPPIPPLPIHHSKFHLTTRLTIASGLMLVAVICALMILFMFIFHYC 60

Query: 61  YHQRLRVVEEDTESRQVSGGVAGVGGRQETAEEIPVAAMMGFREIKTEEIGDCDGRRCAI 120
           YHQRL VV  D ES QVSG  A     +ET+EEIP +  MGFREIKT EIGDCDGR+CAI
Sbjct: 61  YHQRLLVVHGDIESSQVSGTAA-----EETSEEIPASVKMGFREIKTGEIGDCDGRKCAI 120

Query: 121 CIEGFGEEEICGVIENCGHVFHKDCINRWLRIKNRCPLCRCFV 163
           CIEGFGEEEICGVIENCGH FH+DCINRWLRI+ RCPLCRCFV
Sbjct: 121 CIEGFGEEEICGVIENCGHFFHRDCINRWLRIERRCPLCRCFV 158

[Close]

BLAST of CaUC03G051420 vs. NCBI nr
Match: XP_022158253.1 (RING-H2 finger protein ATL14-like [Momordica charantia])

HSP 1 Score: 152.1 bits (383), Expect = 4.1e-33
Identity = 86/151 (56.95%), Postives = 101/151 (66.89%), Query Frame = 0


Query: 16  PNPPP----PIHPIGFHLTTRLTFASGLMLVAVICGLMISFMFIFHYYYHQRLRVVEEDT 75
           P+PPP     IH   FHLT RL  ASG M VAV+C   IS MF+FHYY   + RV   DT
Sbjct: 5   PSPPPQTTAAIHRNTFHLTRRLWVASGFMFVAVVCAFSISLMFVFHYY---KTRV--HDT 64

Query: 76  ESRQVSGGVAGVGGRQETAEEIPVAAMMGFREIKTEEIGDCDGRRCAICIEGFGEEEICG 135
           ESR           + +TAE+IP +A + +R    EEI DC G RCAICIEGF EEE CG
Sbjct: 65  ESR----------SQPQTAEQIPASA-VAYR----EEIRDCGG-RCAICIEGFAEEEKCG 124

Query: 136 VIENCGHVFHKDCINRWLRIKNRCPLCRCFV 163
           VIENCGH FHKDCI+RWL+I++RCPLCRC +
Sbjct: 125 VIENCGHFFHKDCIDRWLKIESRCPLCRCSI 134

[Close]

BLAST of CaUC03G051420 vs. NCBI nr
Match: XP_022964751.1 (RING-H2 finger protein ATL64-like [Cucurbita moschata])

HSP 1 Score: 100.9 bits (250), Expect = 1.1e-17
Identity = 59/144 (40.97%), Postives = 79/144 (54.86%), Query Frame = 0


Query: 38  GLMLVAVICGLMISFMFIFHYY------YHQRLRVVEED-----------TESRQVSGGV 97
           GL++++ I  ++   +F+F  Y      Y  R   VE+             E  Q    +
Sbjct: 7   GLIVLSAIAIIVFLPIFMFRCYHNHLMQYQTRALDVEQTNHATRLFARFRAEFMQQQQSI 66

Query: 98  AGVGGRQETAEE--IPVAAMMGFREIKTEEIGDCDGRRCAICIEGFGEEEICGVIENCGH 157
           A    R  TAEE    +   + +R+IKT E  D D   CAICIEGF EEEICGV++ CGH
Sbjct: 67  AAPPPRSNTAEEEAASIVTKVAYRDIKTTEEADVDD-YCAICIEGFEEEEICGVLDRCGH 126

Query: 158 VFHKDCINRWLRIKNRCPLCRCFV 163
            FHK CI++WLRI +RCPLCRC +
Sbjct: 127 CFHKVCIDQWLRIGSRCPLCRCLI 149

[Close]

BLAST of CaUC03G051420 vs. NCBI nr
Match: XP_022158249.1 (E3 ubiquitin-protein ligase RING1-like [Momordica charantia])

HSP 1 Score: 100.9 bits (250), Expect = 1.1e-17
Identity = 67/165 (40.61%), Postives = 89/165 (53.94%), Query Frame = 0


Query: 16  PNPPPPIH-----PIGFHLTTRLTF--ASGLMLVAVICGLMISFMFIFHYYYHQRLRV-- 75
           P PPP        P+   +T R TF    G   V  IC  +I   FI  Y YH+R+ +  
Sbjct: 5   PTPPPSFSVQYSLPVTVVITHRSTFDPKIGFGFVGFICFSLIVLFFIL-YSYHRRIMLSQ 64

Query: 76  --VEEDTESR----QVSGGVAGVGGRQETA---EEIPVAAMMGFREIKTEEIGDCDGRRC 135
             V +D ESR    +V   V     RQ+ +   + +  A+      I+ EEI D D R C
Sbjct: 65  TRVYDDIESRVQVSRVFTIVLSERARQQPSPPPQTVEEASATAVAIIEAEEIIDSD-RDC 124

Query: 136 AICIEGFGEEEICGVIENCGHVFHKDCINRWLRIKNRCPLCRCFV 163
           AIC EGF E+++C VIE CGH FHKDC+++WL ++  CPLCRCFV
Sbjct: 125 AICFEGFEEKQVCRVIEKCGHFFHKDCVDQWLTMERGCPLCRCFV 167

[Close]

BLAST of CaUC03G051420 vs. NCBI nr
Match: KAA0067736.1 (RING-H2 finger protein ATL52-like [Cucumis melo var. makuwa])

HSP 1 Score: 99.4 bits (246), Expect = 3.2e-17
Identity = 61/151 (40.40%), Postives = 83/151 (54.97%), Query Frame = 0


Query: 38  GLMLVAVICGLMISFMFIFHYYYHQRLRVVEE---DTESR-----------QVSGGVAGV 97
           G + V+V+C ++I F+F   + YH RLR+ +    D E R           Q    +  +
Sbjct: 2   GFLFVSVVCIILIIFLF---HIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEI--I 61

Query: 98  GGRQET--------AEEIPVAAMMGFREIKTEEIGD---CDGRRCAICIEGFGEEEICGV 157
             RQ T         EE   A M    ++K  E G    C    CAICIE F +EEICGV
Sbjct: 62  RQRQTTTQSNDTTEGEETSSAVMTVAYKVKDNEAGGSYCC----CAICIEEFEDEEICGV 121

Query: 158 IENCGHVFHKDCINRWLRIKNRCPLCRCFVH 164
           +E+CGH FH+DC+++WLRI++RCPLCRC VH
Sbjct: 122 VESCGHCFHEDCMDQWLRIESRCPLCRCLVH 143

[Close]

BLAST of CaUC03G051420 vs. ExPASy Swiss-Prot
Match: Q9LRB7 (E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica OX=39947 GN=EL5.1 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 6.6e-10
Identity = 49/168 (29.17%), Postives = 70/168 (41.67%), Query Frame = 0


Query: 9   LPESTRRPNPPPPIHPIGFHLTTRLTFASGLMLVAVICGLMISFMFIFHYYYHQRLRVVE 68
           + ES+   +P P   P G    T    A+   ++ V   L ++F+ +  Y   +R  V  
Sbjct: 12  MDESSSSSSPSPVSAPAGQAAMTAGGIATVAAVLIVFAALTLAFVLLQCYCDERRRAVTT 71

Query: 69  EDTES---------RQVSGGVAGVGG--RQETAEEIPV---AAMMGFREIKTEEIGDCDG 128
             T           R  SGG  G GG    E    +PV   +        K EE  D DG
Sbjct: 72  TSTSGRGRRPRPRRRSGSGGDGGTGGGVDPEVLRSLPVTVYSRSTAAAAAKEEEEEDDDG 131

Query: 129 RRCAICIEGFGEEEICGVIENCGHVFHKDCINRWLRIKNRCPLCRCFV 163
             CA+C+    + E    +  CGH FH +C++ WL   + CPLCR  V
Sbjct: 132 VECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTV 179

[Close]

BLAST of CaUC03G051420 vs. ExPASy Swiss-Prot
Match: Q9M0C3 (RING-H2 finger protein ATL14 OS=Arabidopsis thaliana OX=3702 GN=ATL14 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.5e-09
Identity = 46/164 (28.05%), Postives = 78/164 (47.56%), Query Frame = 0


Query: 13  TRRPNP-PPPIHPIGFHLTTRL--TFASGLMLVAV--------ICGLMISFMFIFHYYYH 72
           +R P+P PPP      +L T++   F  GL+++ V        +  L  +F F F+++  
Sbjct: 12  SREPSPSPPPPKANTKNLPTKILSNFLIGLIMIPVAITAFIFILTSLGFTFFFAFYWFLQ 71

Query: 73  QRLRVVEEDTESRQVSGGVAGVGGRQETAEEIPVAAMMGFREIKTEEIGDCDGRRCAICI 132
           +  R         + S G++         + +P      + E  +E  GD     C +CI
Sbjct: 72  RNYRHRLRRHRRHEYSDGLS-----PRCVKRLP---QFKYCEPSSEYGGD----DCVVCI 131

Query: 133 EGFGEEEICGVIENCGHVFHKDCINRWLRIKNRCPLCRCFVHRF 166
           +GF + + C  +  CGHVFH+ C++ WL   + CP+CR  V+RF
Sbjct: 132 DGFRQGQWCRKLPRCGHVFHRKCVDLWLIKVSTCPICRDRVYRF 163

[Close]

BLAST of CaUC03G051420 vs. ExPASy Swiss-Prot
Match: Q9LX93 (E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana OX=3702 GN=ATL55 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 7.3e-09
Identity = 44/161 (27.33%), Postives = 67/161 (41.61%), Query Frame = 0


Query: 16  PNPPPPIHPIGFHLTTRLTFASGLMLVAVICGLMISFMFIFHYYYHQRLRVV-------- 75
           P PPPP   +   L T +     ++L      L + F    H    +R+           
Sbjct: 29  PPPPPPPRELSLLLPTSICVVGSIILF-----LFLVFFLYLHITQQRRISAASVTPGDTN 88

Query: 76  ----EEDTESRQVSG-----GVAGVGGRQETAEEIPVAAMMGFREIKTEEIGDCDGRRCA 135
               E++TE R  S       +  VG  +     I V   +GF++ +    G  DG  C+
Sbjct: 89  QQEDEDETEERDFSDFHHVWQIPTVGLHRSAINSITV---VGFKKGE----GIIDGTECS 148

Query: 136 ICIEGFGEEEICGVIENCGHVFHKDCINRWLRIKNRCPLCR 160
           +C+  F E+E   ++  C H FH +CI+ WL     CPLCR
Sbjct: 149 VCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCR 177

[Close]

BLAST of CaUC03G051420 vs. ExPASy Swiss-Prot
Match: P93823 (RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-08
Identity = 51/164 (31.10%), Postives = 73/164 (44.51%), Query Frame = 0


Query: 16  PNPPPPIHPIGFHLTTRLTFASG----LMLVAVICGLMISFMFIFHYYY--------HQ- 75
           P PPPP       +  R T +SG    ++ +AVI  L  +F+ + +Y +        HQ 
Sbjct: 17  PPPPPPSTTFTSPIFPR-TSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQI 76

Query: 76  ---RLRVVEEDTESRQVSGGVAGVGGRQETA-EEIPVAAMMGFREIKTEEIGDCDGRRCA 135
              R R    D     +        G  E+A   IPV        +  EE    + + C+
Sbjct: 77  DIFRRRRRSSDQNPLMIYSPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECS 136

Query: 136 ICIEGFGEEEICGVIENCGHVFHKDCINRWLRIKNRCPLCRCFV 163
           +C+  F E+E   +I NC HVFH DCI+ WL+    CPLCR  V
Sbjct: 137 VCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSV 179

[Close]

BLAST of CaUC03G051420 vs. ExPASy Swiss-Prot
Match: Q8LGA5 (E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana OX=3702 GN=ATL31 PE=1 SV=2)

HSP 1 Score: 59.3 bits (142), Expect = 4.7e-08
Identity = 48/158 (30.38%), Postives = 69/158 (43.67%), Query Frame = 0


Query: 7   LPLPESTRRPNPPPPIHPIGFHLTTRLTFASGLMLVAVICGLMISFMFIFHYYYHQRLRV 66
           L L  S  +P  P   H   +  +  L+ A  +++V VI  L   FM  F  Y       
Sbjct: 16  LLLSVSAGQPGTPDQRHD-PYAYSGSLSPAMAVVVVVVIAALF--FMGFFTVYIRHCTGA 75

Query: 67  VEEDT-----ESRQVSGGVAGVGGRQETAEEIPVAAMMGFREIKTEEIGDCDGRRCAICI 126
           V+          R+V+      G   ET E  P      + E+KT++IG      CAIC+
Sbjct: 76  VDGSVTPAGGARRRVTNATVARGLDAETIETFPTFV---YSEVKTQKIGK-GALECAICL 135

Query: 127 EGFGEEEICGVIENCGHVFHKDCINRWLRIKNRCPLCR 160
             F ++E   ++  C HVFH  CI  WL+    CP+CR
Sbjct: 136 NEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCR 166

[Close]

BLAST of CaUC03G051420 vs. ExPASy TrEMBL
Match: A0A6J1DVK4 (RING-H2 finger protein ATL14-like OS=Momordica charantia OX=3673 GN=LOC111024788 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 2.0e-33
Identity = 86/151 (56.95%), Postives = 101/151 (66.89%), Query Frame = 0


Query: 16  PNPPP----PIHPIGFHLTTRLTFASGLMLVAVICGLMISFMFIFHYYYHQRLRVVEEDT 75
           P+PPP     IH   FHLT RL  ASG M VAV+C   IS MF+FHYY   + RV   DT
Sbjct: 5   PSPPPQTTAAIHRNTFHLTRRLWVASGFMFVAVVCAFSISLMFVFHYY---KTRV--HDT 64

Query: 76  ESRQVSGGVAGVGGRQETAEEIPVAAMMGFREIKTEEIGDCDGRRCAICIEGFGEEEICG 135
           ESR           + +TAE+IP +A + +R    EEI DC G RCAICIEGF EEE CG
Sbjct: 65  ESR----------SQPQTAEQIPASA-VAYR----EEIRDCGG-RCAICIEGFAEEEKCG 124

Query: 136 VIENCGHVFHKDCINRWLRIKNRCPLCRCFV 163
           VIENCGH FHKDCI+RWL+I++RCPLCRC +
Sbjct: 125 VIENCGHFFHKDCIDRWLKIESRCPLCRCSI 134

[Close]

BLAST of CaUC03G051420 vs. ExPASy TrEMBL
Match: A0A6J1DYV0 (E3 ubiquitin-protein ligase RING1-like OS=Momordica charantia OX=3673 GN=LOC111024783 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 5.3e-18
Identity = 67/165 (40.61%), Postives = 89/165 (53.94%), Query Frame = 0


Query: 16  PNPPPPIH-----PIGFHLTTRLTF--ASGLMLVAVICGLMISFMFIFHYYYHQRLRV-- 75
           P PPP        P+   +T R TF    G   V  IC  +I   FI  Y YH+R+ +  
Sbjct: 5   PTPPPSFSVQYSLPVTVVITHRSTFDPKIGFGFVGFICFSLIVLFFIL-YSYHRRIMLSQ 64

Query: 76  --VEEDTESR----QVSGGVAGVGGRQETA---EEIPVAAMMGFREIKTEEIGDCDGRRC 135
             V +D ESR    +V   V     RQ+ +   + +  A+      I+ EEI D D R C
Sbjct: 65  TRVYDDIESRVQVSRVFTIVLSERARQQPSPPPQTVEEASATAVAIIEAEEIIDSD-RDC 124

Query: 136 AICIEGFGEEEICGVIENCGHVFHKDCINRWLRIKNRCPLCRCFV 163
           AIC EGF E+++C VIE CGH FHKDC+++WL ++  CPLCRCFV
Sbjct: 125 AICFEGFEEKQVCRVIEKCGHFFHKDCVDQWLTMERGCPLCRCFV 167

[Close]

BLAST of CaUC03G051420 vs. ExPASy TrEMBL
Match: A0A6J1HJU0 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111464742 PE=3 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 5.3e-18
Identity = 59/144 (40.97%), Postives = 79/144 (54.86%), Query Frame = 0


Query: 38  GLMLVAVICGLMISFMFIFHYY------YHQRLRVVEED-----------TESRQVSGGV 97
           GL++++ I  ++   +F+F  Y      Y  R   VE+             E  Q    +
Sbjct: 7   GLIVLSAIAIIVFLPIFMFRCYHNHLMQYQTRALDVEQTNHATRLFARFRAEFMQQQQSI 66

Query: 98  AGVGGRQETAEE--IPVAAMMGFREIKTEEIGDCDGRRCAICIEGFGEEEICGVIENCGH 157
           A    R  TAEE    +   + +R+IKT E  D D   CAICIEGF EEEICGV++ CGH
Sbjct: 67  AAPPPRSNTAEEEAASIVTKVAYRDIKTTEEADVDD-YCAICIEGFEEEEICGVLDRCGH 126

Query: 158 VFHKDCINRWLRIKNRCPLCRCFV 163
            FHK CI++WLRI +RCPLCRC +
Sbjct: 127 CFHKVCIDQWLRIGSRCPLCRCLI 149

[Close]

BLAST of CaUC03G051420 vs. ExPASy TrEMBL
Match: A0A5D3BE50 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G002270 PE=3 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.5e-17
Identity = 61/151 (40.40%), Postives = 83/151 (54.97%), Query Frame = 0


Query: 38  GLMLVAVICGLMISFMFIFHYYYHQRLRVVEE---DTESR-----------QVSGGVAGV 97
           G + V+V+C ++I F+F   + YH RLR+ +    D E R           Q    +  +
Sbjct: 2   GFLFVSVVCIILIIFLF---HIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEI--I 61

Query: 98  GGRQET--------AEEIPVAAMMGFREIKTEEIGD---CDGRRCAICIEGFGEEEICGV 157
             RQ T         EE   A M    ++K  E G    C    CAICIE F +EEICGV
Sbjct: 62  RQRQTTTQSNDTTEGEETSSAVMKVAYKVKDNEAGGSYCC----CAICIEEFEDEEICGV 121

Query: 158 IENCGHVFHKDCINRWLRIKNRCPLCRCFVH 164
           +E+CGH FH+DC+++WLRI++RCPLCRC VH
Sbjct: 122 VESCGHCFHEDCMDQWLRIESRCPLCRCLVH 143

[Close]

BLAST of CaUC03G051420 vs. ExPASy TrEMBL
Match: A0A5A7VMH1 (RING-H2 finger protein ATL52-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00560 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.5e-17
Identity = 61/151 (40.40%), Postives = 83/151 (54.97%), Query Frame = 0


Query: 38  GLMLVAVICGLMISFMFIFHYYYHQRLRVVEE---DTESR-----------QVSGGVAGV 97
           G + V+V+C ++I F+F   + YH RLR+ +    D E R           Q    +  +
Sbjct: 2   GFLFVSVVCIILIIFLF---HIYHYRLRLNQTRTLDIEQRLHEHRTMQLLAQTQAEI--I 61

Query: 98  GGRQET--------AEEIPVAAMMGFREIKTEEIGD---CDGRRCAICIEGFGEEEICGV 157
             RQ T         EE   A M    ++K  E G    C    CAICIE F +EEICGV
Sbjct: 62  RQRQTTTQSNDTTEGEETSSAVMTVAYKVKDNEAGGSYCC----CAICIEEFEDEEICGV 121

Query: 158 IENCGHVFHKDCINRWLRIKNRCPLCRCFVH 164
           +E+CGH FH+DC+++WLRI++RCPLCRC VH
Sbjct: 122 VESCGHCFHEDCMDQWLRIESRCPLCRCLVH 143

[Close]

BLAST of CaUC03G051420 vs. TAIR 10
Match: AT2G37150.1 (RING/U-box superfamily protein )

HSP 1 Score: 65.1 bits (157), Expect = 6.1e-11
Identity = 29/75 (38.67%), Postives = 45/75 (60.00%), Query Frame = 0


Query: 85  GRQETAEEIPVAAMMGFREIKTEEIGDCDGRRCAICIEGFGEEEICGVIENCGHVFHKDC 144
           G  ++A    + A M +   +TEE      R+CAIC+E + E+E  G ++ CGH +H  C
Sbjct: 465 GLSDSAISSCLLATMYYPSYQTEE-----QRKCAICLEEYKEKEELGEVKGCGHDYHGRC 524

Query: 145 INRWLRIKNRCPLCR 160
           I +WL +KN CP+C+
Sbjct: 525 IKKWLSMKNSCPICK 534

[Close]

BLAST of CaUC03G051420 vs. TAIR 10
Match: AT2G37150.2 (RING/U-box superfamily protein )

HSP 1 Score: 65.1 bits (157), Expect = 6.1e-11
Identity = 29/75 (38.67%), Postives = 45/75 (60.00%), Query Frame = 0


Query: 85  GRQETAEEIPVAAMMGFREIKTEEIGDCDGRRCAICIEGFGEEEICGVIENCGHVFHKDC 144
           G  ++A    + A M +   +TEE      R+CAIC+E + E+E  G ++ CGH +H  C
Sbjct: 465 GLSDSAISSCLLATMYYPSYQTEE-----QRKCAICLEEYKEKEELGEVKGCGHDYHGRC 524

Query: 145 INRWLRIKNRCPLCR 160
           I +WL +KN CP+C+
Sbjct: 525 IKKWLSMKNSCPICK 534

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BLAST of CaUC03G051420 vs. TAIR 10
Match: AT2G37150.3 (RING/U-box superfamily protein )

HSP 1 Score: 65.1 bits (157), Expect = 6.1e-11
Identity = 29/75 (38.67%), Postives = 45/75 (60.00%), Query Frame = 0


Query: 85  GRQETAEEIPVAAMMGFREIKTEEIGDCDGRRCAICIEGFGEEEICGVIENCGHVFHKDC 144
           G  ++A    + A M +   +TEE      R+CAIC+E + E+E  G ++ CGH +H  C
Sbjct: 518 GLSDSAISSCLLATMYYPSYQTEE-----QRKCAICLEEYKEKEELGEVKGCGHDYHGRC 577

Query: 145 INRWLRIKNRCPLCR 160
           I +WL +KN CP+C+
Sbjct: 578 IKKWLSMKNSCPICK 587

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BLAST of CaUC03G051420 vs. TAIR 10
Match: AT4G30370.1 (RING/U-box superfamily protein )

HSP 1 Score: 64.3 bits (155), Expect = 1.0e-10
Identity = 46/164 (28.05%), Postives = 78/164 (47.56%), Query Frame = 0


Query: 13  TRRPNP-PPPIHPIGFHLTTRL--TFASGLMLVAV--------ICGLMISFMFIFHYYYH 72
           +R P+P PPP      +L T++   F  GL+++ V        +  L  +F F F+++  
Sbjct: 12  SREPSPSPPPPKANTKNLPTKILSNFLIGLIMIPVAITAFIFILTSLGFTFFFAFYWFLQ 71

Query: 73  QRLRVVEEDTESRQVSGGVAGVGGRQETAEEIPVAAMMGFREIKTEEIGDCDGRRCAICI 132
           +  R         + S G++         + +P      + E  +E  GD     C +CI
Sbjct: 72  RNYRHRLRRHRRHEYSDGLS-----PRCVKRLP---QFKYCEPSSEYGGD----DCVVCI 131

Query: 133 EGFGEEEICGVIENCGHVFHKDCINRWLRIKNRCPLCRCFVHRF 166
           +GF + + C  +  CGHVFH+ C++ WL   + CP+CR  V+RF
Sbjct: 132 DGFRQGQWCRKLPRCGHVFHRKCVDLWLIKVSTCPICRDRVYRF 163

[Close]

BLAST of CaUC03G051420 vs. TAIR 10
Match: AT5G10380.1 (RING/U-box superfamily protein )

HSP 1 Score: 62.0 bits (149), Expect = 5.2e-10
Identity = 44/161 (27.33%), Postives = 67/161 (41.61%), Query Frame = 0


Query: 16  PNPPPPIHPIGFHLTTRLTFASGLMLVAVICGLMISFMFIFHYYYHQRLRVV-------- 75
           P PPPP   +   L T +     ++L      L + F    H    +R+           
Sbjct: 29  PPPPPPPRELSLLLPTSICVVGSIILF-----LFLVFFLYLHITQQRRISAASVTPGDTN 88

Query: 76  ----EEDTESRQVSG-----GVAGVGGRQETAEEIPVAAMMGFREIKTEEIGDCDGRRCA 135
               E++TE R  S       +  VG  +     I V   +GF++ +    G  DG  C+
Sbjct: 89  QQEDEDETEERDFSDFHHVWQIPTVGLHRSAINSITV---VGFKKGE----GIIDGTECS 148

Query: 136 ICIEGFGEEEICGVIENCGHVFHKDCINRWLRIKNRCPLCR 160
           +C+  F E+E   ++  C H FH +CI+ WL     CPLCR
Sbjct: 149 VCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCR 177

The following BLAST results are available for this feature:

BLAST of CaUC03G051420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031742489.1	4.2e-62	77.30	RING-H2 finger protein ATL1-like [Cucumis sativus] >KAE8653253.1 hypothetical pr...	[more]
XP_022158253.1	4.1e-33	56.95	RING-H2 finger protein ATL14-like [Momordica charantia]	[more]
XP_022964751.1	1.1e-17	40.97	RING-H2 finger protein ATL64-like [Cucurbita moschata]	[more]
XP_022158249.1	1.1e-17	40.61	E3 ubiquitin-protein ligase RING1-like [Momordica charantia]	[more]
KAA0067736.1	3.2e-17	40.40	RING-H2 finger protein ATL52-like [Cucumis melo var. makuwa]	[more]

BLAST of CaUC03G051420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LRB7	6.6e-10	29.17	E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica OX=39947 GN=EL5....	[more]
Q9M0C3	1.5e-09	28.05	RING-H2 finger protein ATL14 OS=Arabidopsis thaliana OX=3702 GN=ATL14 PE=2 SV=1	[more]
Q9LX93	7.3e-09	27.33	E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana OX=3702 GN=ATL55 PE=1 ...	[more]
P93823	1.6e-08	31.10	RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1	[more]
Q8LGA5	4.7e-08	30.38	E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana OX=3702 GN=ATL31 PE=1 ...	[more]

BLAST of CaUC03G051420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DVK4	2.0e-33	56.95	RING-H2 finger protein ATL14-like OS=Momordica charantia OX=3673 GN=LOC111024788...	[more]
A0A6J1DYV0	5.3e-18	40.61	E3 ubiquitin-protein ligase RING1-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1HJU0	5.3e-18	40.97	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111464742...	[more]
A0A5D3BE50	1.5e-17	40.40	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A5A7VMH1	1.5e-17	40.40	RING-H2 finger protein ATL52-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of CaUC03G051420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37150.1	6.1e-11	38.67	RING/U-box superfamily protein	[more]
AT2G37150.2	6.1e-11	38.67	RING/U-box superfamily protein	[more]
AT2G37150.3	6.1e-11	38.67	RING/U-box superfamily protein	[more]
AT4G30370.1	1.0e-10	28.05	RING/U-box superfamily protein	[more]
AT5G10380.1	5.2e-10	27.33	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 117..158 e-value: 1.6E-6 score: 37.6
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 116..159 e-value: 2.0E-13 score: 50.4
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 117..159 score: 13.330199
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 84..163 e-value: 1.4E-16 score: 61.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 29..160
None	No IPR available	PANTHER	PTHR14155:SF550	RING-H2 FINGER PROTEIN ATL40	coord: 29..160
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 101..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC03G051420.1	CaUC03G051420.1	mRNA