CaUC03G051290 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTTTCTCTCTTTCTCTCTTTCTCTCTTTCTTTGTTAGTTTTGAATCTTTTTACAAACTAAAATGGAATGCAAAAACCAGCAGCCTCAATCACCAAAATATGAGTGTCTTCTCTTTGGTAATCCCTCCACCTTCAAAACAAAACTCAAGAAATTATTACACTAAAAATTTGAAGTTTAAGATATGTATGTTTTAATTTGGCAGATGTTGATGACACCCTTTACCCTCTTAGTTCTGGTTTGTCAAAAGAATGCACCAAAAACATTGAAGGTACTCATTCATCTTATCAACCCTTTTTTTCCTTTTTTGTTTTGGCTTTGGATTCTCATTTTTTCTTTCTTGTCTTTGACAGAGTATATGGTTCAACAACTTGGGATACAGAAAGATGGAGTTGTAGAGATGAATCAGTTTTTGTATAGGAATTATGGGACATCCATGGCTGGCCTTAAGGTCCAATCTTTCAAACTCTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGACAAATTTACATAAAACCCAATTGAATTTTGTACTAAAGTTTCAATCTTTTTGCTTTCTTGTGTAGGCTATTGGTTATGAGTTTGACAACGATCATTATCATAGGTACTATCACACTCTTTTCTCTCTTTGAGCGTGTTTAGAAGTGATTTAGAATTTGTCAAAATCACTTCAAAACGTGCTTATAATGATTTCAAACACGAAAATAGCAATATAACTAATCATATTAACATCACCCCAAGCATGTTTTGAATATAATCTTTCAACAAATAAATCTTTGTTTGCTATATTGTAGCTTGGTTCATGGAAGATTGCCATATGACAATTTGAAGCGTGATCCAGTTCTTAGAAATCTCTTACTTAGTTTGCCCATTCGCAAAGTGGTAAGAACCTTTCTTTCAATTTATATATATATATATATGTATTTCGAGTTTAATACGTTATCATAGCAAGAATTTCTAACTTTTTAGGTTGGTGAAACAGATCTTCTCGAATGCGGATGAAGTTCATGTTGCCAAAGTTCTAAGTAGGCTTGGTTTGGAGGGTTGCTTTGAAAGGATCATATGCTTTGAAACTCTTAACTCATCTGATTCAAACACTGCTTCTGATGATGACTCTGAATTTGATTCCAAAAGCTCGACGAACAGCGACACGGACGACGCTCCTCCACCGCTTCCCGTCACTTCGATTCTTTGCAAACCATCTCCACAAGCATTTGAATATGCACTCAAGATAGCCAACATTGACCCCAAAAGAACAGTAAGAAAATCCTCTTCCCATCTTCTCAATATAAAATTACAAAACTTAAAAGATGATGAGATTTTGAAATTTGTATTTGTAGCTTTTCTTTGATGACAGCATCCGCAACATAAAGACTGGAAAATCCAATGGCCTCCATACAGTGCTGGTGAGTTCATACATACTCATTTGATTTCTTCTCCAAAATCATTTAAAGGAAATGAAAATGAATAATTCAAACACATATCTTTTAATTACTTTGTAGGTTGGGTCATCCAACAGAGGCAATGGTGTGGATTATGCATTGGAAAGCATTCATAATATAAGAGAAGCATTGCCAGAGCTATGGGAAGTGGATCAGAAGATGAAGAATAAAAGACTTTCTGAAAGCATTGCATTGGAAACATCTGTTGTGACTGCCTAACTAACTAATTGATATCCATGTTATTAGTCTAATAATGGAGTTTGGATGTTGTATTAATCCACACCATTTGTAATAAATAATTTACAATATATGAAATGTAAAGCAAAGTTCTCTCTATCTTTGCTTTTGATATTGAGATATGCAAATATGATTGTTAGTCTATTAGAATGCAAATGAAGTAAACTTATGGGTAGTTCACAAAATTGTTTTTAAATAATTCAAGTTTTTGCTCAACCATATATATATATTCCATTTGTGGATGATTGTTTCC TCTTTCTCTCTTTCTCTCTTTCTCTCTTTCTTTGTTAGTTTTGAATCTTTTTACAAACTAAAATGGAATGCAAAAACCAGCAGCCTCAATCACCAAAATATGAGTGTCTTCTCTTTGATGTTGATGACACCCTTTACCCTCTTAGTTCTGGTTTGTCAAAAGAATGCACCAAAAACATTGAAGAGTATATGGTTCAACAACTTGGGATACAGAAAGATGGAGTTGTAGAGATGAATCAGTTTTTGTATAGGAATTATGGGACATCCATGGCTGGCCTTAAGGCTATTGGTTATGAGTTTGACAACGATCATTATCATAGCTTGGTTCATGGAAGATTGCCATATGACAATTTGAAGCGTGATCCAGTTCTTAGAAATCTCTTACTTAGTTTGCCCATTCGCAAAGTGATCTTCTCGAATGCGGATGAAGTTCATGTTGCCAAAGTTCTAAGTAGGCTTGGTTTGGAGGGTTGCTTTGAAAGGATCATATGCTTTGAAACTCTTAACTCATCTGATTCAAACACTGCTTCTGATGATGACTCTGAATTTGATTCCAAAAGCTCGACGAACAGCGACACGGACGACGCTCCTCCACCGCTTCCCGTCACTTCGATTCTTTGCAAACCATCTCCACAAGCATTTGAATATGCACTCAAGATAGCCAACATTGACCCCAAAAGAACACTTTTCTTTGATGACAGCATCCGCAACATAAAGACTGGAAAATCCAATGGCCTCCATACAGTGCTGGTTGGGTCATCCAACAGAGGCAATGGTGTGGATTATGCATTGGAAAGCATTCATAATATAAGAGAAGCATTGCCAGAGCTATGGGAAGTGGATCAGAAGATGAAGAATAAAAGACTTTCTGAAAGCATTGCATTGGAAACATCTGTTGTGACTGCCTAACTAACTAATTGATATCCATGTTATTAGTCTAATAATGGAGTTTGGATGTTGTATTAATCCACACCATTTGTAATAAATAATTTACAATATATGAAATGTAAAGCAAAGTTCTCTCTATCTTTGCTTTTGATATTGAGATATGCAAATATGATTGTTAGTCTATTAGAATGCAAATGAAGTAAACTTATGGGTAGTTCACAAAATTGTTTTTAAATAATTCAAGTTTTTGCTCAACCATATATATATATTCCATTTGTGGATGATTGTTTCC ATGGAATGCAAAAACCAGCAGCCTCAATCACCAAAATATGAGTGTCTTCTCTTTGATGTTGATGACACCCTTTACCCTCTTAGTTCTGGTTTGTCAAAAGAATGCACCAAAAACATTGAAGAGTATATGGTTCAACAACTTGGGATACAGAAAGATGGAGTTGTAGAGATGAATCAGTTTTTGTATAGGAATTATGGGACATCCATGGCTGGCCTTAAGGCTATTGGTTATGAGTTTGACAACGATCATTATCATAGCTTGGTTCATGGAAGATTGCCATATGACAATTTGAAGCGTGATCCAGTTCTTAGAAATCTCTTACTTAGTTTGCCCATTCGCAAAGTGATCTTCTCGAATGCGGATGAAGTTCATGTTGCCAAAGTTCTAAGTAGGCTTGGTTTGGAGGGTTGCTTTGAAAGGATCATATGCTTTGAAACTCTTAACTCATCTGATTCAAACACTGCTTCTGATGATGACTCTGAATTTGATTCCAAAAGCTCGACGAACAGCGACACGGACGACGCTCCTCCACCGCTTCCCGTCACTTCGATTCTTTGCAAACCATCTCCACAAGCATTTGAATATGCACTCAAGATAGCCAACATTGACCCCAAAAGAACACTTTTCTTTGATGACAGCATCCGCAACATAAAGACTGGAAAATCCAATGGCCTCCATACAGTGCTGGTTGGGTCATCCAACAGAGGCAATGGTGTGGATTATGCATTGGAAAGCATTCATAATATAAGAGAAGCATTGCCAGAGCTATGGGAAGTGGATCAGAAGATGAAGAATAAAAGACTTTCTGAAAGCATTGCATTGGAAACATCTGTTGTGACTGCCTAA MECKNQQPQSPKYECLLFDVDDTLYPLSSGLSKECTKNIEEYMVQQLGIQKDGVVEMNQFLYRNYGTSMAGLKAIGYEFDNDHYHSLVHGRLPYDNLKRDPVLRNLLLSLPIRKVIFSNADEVHVAKVLSRLGLEGCFERIICFETLNSSDSNTASDDDSEFDSKSSTNSDTDDAPPPLPVTSILCKPSPQAFEYALKIANIDPKRTLFFDDSIRNIKTGKSNGLHTVLVGSSNRGNGVDYALESIHNIREALPELWEVDQKMKNKRLSESIALETSVVTA Homology
BLAST of CaUC03G051290 vs. NCBI nr
Match: XP_038895028.1 (suppressor of disruption of TFIIS-like [Benincasa hispida]) HSP 1 Score: 510.0 bits (1312), Expect = 1.3e-140 Identity = 257/281 (91.46%), Postives = 266/281 (94.66%), Query Frame = 0
BLAST of CaUC03G051290 vs. NCBI nr
Match: KAA0067755.1 (Haloacid dehalogenase-like hydrolase superfamily protein [Cucumis melo var. makuwa]) HSP 1 Score: 502.3 bits (1292), Expect = 2.7e-138 Identity = 250/278 (89.93%), Postives = 268/278 (96.40%), Query Frame = 0
BLAST of CaUC03G051290 vs. NCBI nr
Match: XP_016902087.1 (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC107990309 [Cucumis melo]) HSP 1 Score: 501.9 bits (1291), Expect = 3.6e-138 Identity = 251/282 (89.01%), Postives = 269/282 (95.39%), Query Frame = 0
BLAST of CaUC03G051290 vs. NCBI nr
Match: XP_031737241.1 (uncharacterized protein LOC116402191 [Cucumis sativus] >KGN66165.2 hypothetical protein Csa_020092 [Cucumis sativus]) HSP 1 Score: 497.3 bits (1279), Expect = 8.8e-137 Identity = 249/282 (88.30%), Postives = 267/282 (94.68%), Query Frame = 0
BLAST of CaUC03G051290 vs. NCBI nr
Match: XP_038895221.1 (suppressor of disruption of TFIIS-like [Benincasa hispida]) HSP 1 Score: 493.0 bits (1268), Expect = 1.7e-135 Identity = 253/283 (89.40%), Postives = 262/283 (92.58%), Query Frame = 0
BLAST of CaUC03G051290 vs. ExPASy Swiss-Prot
Match: Q09893 (Uncharacterized protein C24B11.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC24B11.05 PE=3 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 2.2e-13 Identity = 60/213 (28.17%), Postives = 95/213 (44.60%), Query Frame = 0
BLAST of CaUC03G051290 vs. ExPASy Swiss-Prot
Match: P53078 (Suppressor of disruption of TFIIS OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SDT1 PE=1 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.7e-10 Identity = 68/239 (28.45%), Postives = 108/239 (45.19%), Query Frame = 0
BLAST of CaUC03G051290 vs. ExPASy TrEMBL
Match: A0A5A7VPY6 (Haloacid dehalogenase-like hydrolase superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00750 PE=4 SV=1) HSP 1 Score: 502.3 bits (1292), Expect = 1.3e-138 Identity = 250/278 (89.93%), Postives = 268/278 (96.40%), Query Frame = 0
BLAST of CaUC03G051290 vs. ExPASy TrEMBL
Match: A0A1S4E1I6 (LOW QUALITY PROTEIN: uncharacterized protein LOC107990309 OS=Cucumis melo OX=3656 GN=LOC107990309 PE=4 SV=1) HSP 1 Score: 501.9 bits (1291), Expect = 1.7e-138 Identity = 251/282 (89.01%), Postives = 269/282 (95.39%), Query Frame = 0
BLAST of CaUC03G051290 vs. ExPASy TrEMBL
Match: A0A0A0LXF2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G523630 PE=4 SV=1) HSP 1 Score: 496.5 bits (1277), Expect = 7.3e-137 Identity = 249/282 (88.30%), Postives = 267/282 (94.68%), Query Frame = 0
BLAST of CaUC03G051290 vs. ExPASy TrEMBL
Match: A0A5D3BGT5 (HAD-superfamily hydrolase, subfamily IA, variant 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G002070 PE=4 SV=1) HSP 1 Score: 473.8 bits (1218), Expect = 5.0e-130 Identity = 239/283 (84.45%), Postives = 261/283 (92.23%), Query Frame = 0
BLAST of CaUC03G051290 vs. ExPASy TrEMBL
Match: A0A1S3C5J6 (uncharacterized protein LOC103497145 OS=Cucumis melo OX=3656 GN=LOC103497145 PE=4 SV=1) HSP 1 Score: 473.8 bits (1218), Expect = 5.0e-130 Identity = 239/283 (84.45%), Postives = 261/283 (92.23%), Query Frame = 0
BLAST of CaUC03G051290 vs. TAIR 10
Match: AT5G02230.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 334.0 bits (855), Expect = 1.2e-91 Identity = 166/269 (61.71%), Postives = 207/269 (76.95%), Query Frame = 0
BLAST of CaUC03G051290 vs. TAIR 10
Match: AT5G02230.2 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 334.0 bits (855), Expect = 1.2e-91 Identity = 166/269 (61.71%), Postives = 207/269 (76.95%), Query Frame = 0
BLAST of CaUC03G051290 vs. TAIR 10
Match: AT5G59480.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 322.4 bits (825), Expect = 3.6e-88 Identity = 167/278 (60.07%), Postives = 208/278 (74.82%), Query Frame = 0
BLAST of CaUC03G051290 vs. TAIR 10
Match: AT5G59490.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 319.3 bits (817), Expect = 3.1e-87 Identity = 169/283 (59.72%), Postives = 204/283 (72.08%), Query Frame = 0
BLAST of CaUC03G051290 vs. TAIR 10
Match: AT5G59480.2 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 316.6 bits (810), Expect = 2.0e-86 Identity = 167/278 (60.07%), Postives = 207/278 (74.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|