CaUC03G050080 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGGTCGAGTCCACTATTTTCTACCCATATGGTTGCCACGTTGCTCTCTCGTCAACGCTTCTCTACTACATGCACAAGAAAGGCTTATTCGTGGACGGAGTTCACGAGTTTCACGTTACTCTGGACCAGACTCACGAATCATGTGTTATGGGGCCAATTGACATGAACCAAAGTTTGACCAACGTTAAAAACTCGAGGACCTTATACACGATTTGCTTATTCACTTTTGTCAATACTATCCAACTACACCCTAAATGAGACATTTGTTTATATAATTACGTTATTTTTTTGAATTTTTTTTCTCACCACACTATTTTTGTTATTTTTAGATAAATTTATTATTAGAGAATTTAGTCTCAATATTAAATAAGTTTGAAAGAATGATACTTTTTACCACGAATATTACATCCCATATACATAGACAAATTATTTTGTATGGAATATAATATTTTGATGACATAGTCTAAAAAAAAGTTTTAATATACATGGGTTAAAATTTTAATTATATTTTACAAATGTCCTTTGTGTTGTACTTGTAGCGAAATTCTTGGCTACAAATGCTTAGATATGCAGTCCAACAGTATATATAAAGGATCGCCCATCACCCATAGGACTACAAAACCCCAACATTTCTCAACTCCGTCATTATTTATTTAACTAACCGCCCCTCCGGCAGCTGGTCGTCGGAATTACGAAACTGGCAAACTCAGAGTGGTCGTCGGAGCAAAGGGAGAGCGTTGGGAGAGTGAGAGTCCTTTACGAGGCGTTGGGTTCCAAAGACGTGGAGACGGTGCACCGCCTTCTGGCGCCGGACCTGGAGTGGTGGTTCCATGGTCCTCCGTCGCACCAGTACTTGATGCGCCTCCTCACCGGCGCCTCCTCCTCCTTTGTCTTCGCACCAATCTCTGTCGTCCCATTTGGGCCCAATTTCGTCCTGGCGGAAGGCTACGACACAAAACGCGCCGTTTCCTGGGTCCACGCCTGGACCATTACTGATGGGATCATCACCCACGTCAAGGAATATCTCAACACCTCTGTTACTGTCAAGTGCTTCTCCTCCGCCGCCGACGGGGACTCGCCTTCCGCATCTCCACCGCCTAACTGCCAGAGTGTGTGGCAGAGCAAGGTCTGGGGAGAATCGGTGGTGCCTGCTCTTGTTTTGGCTCTTTAG ATGTGGGTCGAGTCCACTATTTTCTACCCATATGGTTGCCACGTTGCTCTCTCGTCAACGCTTCTCTACTACATGCACAAGAAAGGCTTATTCGTGGACGGAGTTCACGAGTTTCACCTGGTCGTCGGAATTACGAAACTGGCAAACTCAGAGTGGTCGTCGGAGCAAAGGGAGAGCGTTGGGAGAGTGAGAGTCCTTTACGAGGCGTTGGGTTCCAAAGACGTGGAGACGGTGCACCGCCTTCTGGCGCCGGACCTGGAGTGGTGGTTCCATGGTCCTCCGTCGCACCAGTACTTGATGCGCCTCCTCACCGGCGCCTCCTCCTCCTTTGTCTTCGCACCAATCTCTGTCGTCCCATTTGGGCCCAATTTCGTCCTGGCGGAAGGCTACGACACAAAACGCGCCGTTTCCTGGGTCCACGCCTGGACCATTACTGATGGGATCATCACCCACGTCAAGGAATATCTCAACACCTCTGTTACTGTCAAGTGCTTCTCCTCCGCCGCCGACGGGGACTCGCCTTCCGCATCTCCACCGCCTAACTGCCAGAGTGTGTGGCAGAGCAAGGTCTGGGGAGAATCGGTGGTGCCTGCTCTTGTTTTGGCTCTTTAG ATGTGGGTCGAGTCCACTATTTTCTACCCATATGGTTGCCACGTTGCTCTCTCGTCAACGCTTCTCTACTACATGCACAAGAAAGGCTTATTCGTGGACGGAGTTCACGAGTTTCACCTGGTCGTCGGAATTACGAAACTGGCAAACTCAGAGTGGTCGTCGGAGCAAAGGGAGAGCGTTGGGAGAGTGAGAGTCCTTTACGAGGCGTTGGGTTCCAAAGACGTGGAGACGGTGCACCGCCTTCTGGCGCCGGACCTGGAGTGGTGGTTCCATGGTCCTCCGTCGCACCAGTACTTGATGCGCCTCCTCACCGGCGCCTCCTCCTCCTTTGTCTTCGCACCAATCTCTGTCGTCCCATTTGGGCCCAATTTCGTCCTGGCGGAAGGCTACGACACAAAACGCGCCGTTTCCTGGGTCCACGCCTGGACCATTACTGATGGGATCATCACCCACGTCAAGGAATATCTCAACACCTCTGTTACTGTCAAGTGCTTCTCCTCCGCCGCCGACGGGGACTCGCCTTCCGCATCTCCACCGCCTAACTGCCAGAGTGTGTGGCAGAGCAAGGTCTGGGGAGAATCGGTGGTGCCTGCTCTTGTTTTGGCTCTTTAG MWVESTIFYPYGCHVALSSTLLYYMHKKGLFVDGVHEFHLVVGITKLANSEWSSEQRESVGRVRVLYEALGSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTGASSSFVFAPISVVPFGPNFVLAEGYDTKRAVSWVHAWTITDGIITHVKEYLNTSVTVKCFSSAADGDSPSASPPPNCQSVWQSKVWGESVVPALVLAL Homology
BLAST of CaUC03G050080 vs. NCBI nr
Match: KAA0059984.1 (putative Senescence associated protein 20 [Cucumis melo var. makuwa] >TYJ97243.1 putative Senescence associated protein 20 [Cucumis melo var. makuwa]) HSP 1 Score: 289.3 bits (739), Expect = 2.6e-74 Identity = 142/163 (87.12%), Postives = 149/163 (91.41%), Query Frame = 0
BLAST of CaUC03G050080 vs. NCBI nr
Match: KAG6607351.1 (Senescence associated protein 20, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 255.8 bits (652), Expect = 3.2e-64 Identity = 137/179 (76.54%), Postives = 148/179 (82.68%), Query Frame = 0
BLAST of CaUC03G050080 vs. NCBI nr
Match: KAG7037026.1 (Senescence associated protein 20, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 254.6 bits (649), Expect = 7.2e-64 Identity = 137/174 (78.74%), Postives = 145/174 (83.33%), Query Frame = 0
BLAST of CaUC03G050080 vs. NCBI nr
Match: XP_038893485.1 (senescence associated gene 20-like [Benincasa hispida]) HSP 1 Score: 188.7 bits (478), Expect = 4.8e-44 Identity = 93/106 (87.74%), Postives = 98/106 (92.45%), Query Frame = 0
BLAST of CaUC03G050080 vs. NCBI nr
Match: XP_017982445.1 (PREDICTED: uncharacterized protein LOC18591051 [Theobroma cacao]) HSP 1 Score: 187.6 bits (475), Expect = 1.1e-43 Identity = 93/160 (58.13%), Postives = 116/160 (72.50%), Query Frame = 0
BLAST of CaUC03G050080 vs. ExPASy Swiss-Prot
Match: Q94AK6 (Senescence associated gene 20 OS=Arabidopsis thaliana OX=3702 GN=SAG20 PE=2 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 6.6e-20 Identity = 55/111 (49.55%), Postives = 74/111 (66.67%), Query Frame = 0
BLAST of CaUC03G050080 vs. ExPASy Swiss-Prot
Match: P20144 (Wound-induced protein 1 OS=Solanum tuberosum OX=4113 GN=WUN1 PE=2 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 3.2e-14 Identity = 50/111 (45.05%), Postives = 70/111 (63.06%), Query Frame = 0
BLAST of CaUC03G050080 vs. ExPASy TrEMBL
Match: A0A5A7UY51 (Putative Senescence associated protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00340 PE=4 SV=1) HSP 1 Score: 289.3 bits (739), Expect = 1.3e-74 Identity = 142/163 (87.12%), Postives = 149/163 (91.41%), Query Frame = 0
BLAST of CaUC03G050080 vs. ExPASy TrEMBL
Match: A0A061GYQ0 (Senescence associated gene 20, putative OS=Theobroma cacao OX=3641 GN=TCM_042245 PE=4 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 5.2e-44 Identity = 93/160 (58.13%), Postives = 116/160 (72.50%), Query Frame = 0
BLAST of CaUC03G050080 vs. ExPASy TrEMBL
Match: A0A1U7ZU64 (uncharacterized protein LOC104597350 OS=Nelumbo nucifera OX=4432 GN=LOC104597350 PE=4 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 2.2e-42 Identity = 96/165 (58.18%), Postives = 118/165 (71.52%), Query Frame = 0
BLAST of CaUC03G050080 vs. ExPASy TrEMBL
Match: A0A2N9EI45 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2202 PE=4 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 1.9e-41 Identity = 99/172 (57.56%), Postives = 119/172 (69.19%), Query Frame = 0
BLAST of CaUC03G050080 vs. ExPASy TrEMBL
Match: A0A1R3K5H8 (Wound-induced protein, Wun1 OS=Corchorus olitorius OX=93759 GN=COLO4_11170 PE=4 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 7.1e-41 Identity = 91/157 (57.96%), Postives = 112/157 (71.34%), Query Frame = 0
BLAST of CaUC03G050080 vs. TAIR 10
Match: AT5G01740.1 (Nuclear transport factor 2 (NTF2) family protein ) HSP 1 Score: 104.8 bits (260), Expect = 8.6e-23 Identity = 61/155 (39.35%), Postives = 92/155 (59.35%), Query Frame = 0
BLAST of CaUC03G050080 vs. TAIR 10
Match: AT3G10985.1 (senescence associated gene 20 ) HSP 1 Score: 99.0 bits (245), Expect = 4.7e-21 Identity = 55/111 (49.55%), Postives = 74/111 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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