CaUC02G035130 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC02G035130
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Nuclear transcription factor Y subunit B-3
Location	Ciama_Chr02: 13839377 .. 13840090 (+)
RNA-Seq Expression	CaUC02G035130
Synteny	CaUC02G035130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTTGAAAATCACAGTTGAGGATCAAATGGCCAATCTTCCTTTGAGAACCCCATTATCATGGTTTATTGCTCTAACTTCTTTTCTCCTCTGTTTGGGTTTTTTGGGATTTAGATTCTTCTCATCTTTTTTACTTACTTCCATAGCTCTGATTATGTCTATGCTCTATTTTTCAATCTCCAAAAGAAATTCACTTCCTGTACAGAAATTTGTACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATCAGAAAGAACTGAACTTTCTTTCTGATCAATTGAAATTCTCGTCGGCGTCAGGTCCGACGACCGGAGATTTGCTGTCGGAAAGTGAATGTGCCGATGATAATTTCACGACCACAGAGGAATCCGAAGTGGAGTGGCCGTATTTTGACCGCCGGTCGTATACAGCGAAAAACACGGACCGGTCTGACGACGGTTCGATTTCCGATGAGGAAAGTTTGATCGAAATCGCTCTCCCGACCGGACATTACGTCAGCCATAAGTTCGATGACGAGGACGACATGTCGTTTCGTTTCCAGAAACTGTCGGATTTTCAGATGAAGAAGAATCTTGTGGAGGTGTTGGCTGAAATGAACGACATCAATGAGGAGGAGAATTTGATTGAGATCGACATATCGATGGGCTCCATTAAATATTCAAGGTTTGAAATTGAAGCTTGA

mRNA sequence

ATGAAGTTGAAAATCACAGTTGAGGATCAAATGGCCAATCTTCCTTTGAGAACCCCATTATCATGGTTTATTGCTCTAACTTCTTTTCTCCTCTGTTTGGGTTTTTTGGGATTTAGATTCTTCTCATCTTTTTTACTTACTTCCATAGCTCTGATTATGTCTATGCTCTATTTTTCAATCTCCAAAAGAAATTCACTTCCTGTACAGAAATTTGTACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATCAGAAAGAACTGAACTTTCTTTCTGATCAATTGAAATTCTCGTCGGCGTCAGGTCCGACGACCGGAGATTTGCTGTCGGAAAGTGAATGTGCCGATGATAATTTCACGACCACAGAGGAATCCGAAGTGGAGTGGCCGTATTTTGACCGCCGGTCGTATACAGCGAAAAACACGGACCGGTCTGACGACGGTTCGATTTCCGATGAGGAAAGTTTGATCGAAATCGCTCTCCCGACCGGACATTACGTCAGCCATAAGTTCGATGACGAGGACGACATGTCGTTTCGTTTCCAGAAACTGTCGGATTTTCAGATGAAGAAGAATCTTGTGGAGGTGTTGGCTGAAATGAACGACATCAATGAGGAGGAGAATTTGATTGAGATCGACATATCGATGGGCTCCATTAAATATTCAAGGTTTGAAATTGAAGCTTGA

Coding sequence (CDS)

ATGAAGTTGAAAATCACAGTTGAGGATCAAATGGCCAATCTTCCTTTGAGAACCCCATTATCATGGTTTATTGCTCTAACTTCTTTTCTCCTCTGTTTGGGTTTTTTGGGATTTAGATTCTTCTCATCTTTTTTACTTACTTCCATAGCTCTGATTATGTCTATGCTCTATTTTTCAATCTCCAAAAGAAATTCACTTCCTGTACAGAAATTTGTACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATCAGAAAGAACTGAACTTTCTTTCTGATCAATTGAAATTCTCGTCGGCGTCAGGTCCGACGACCGGAGATTTGCTGTCGGAAAGTGAATGTGCCGATGATAATTTCACGACCACAGAGGAATCCGAAGTGGAGTGGCCGTATTTTGACCGCCGGTCGTATACAGCGAAAAACACGGACCGGTCTGACGACGGTTCGATTTCCGATGAGGAAAGTTTGATCGAAATCGCTCTCCCGACCGGACATTACGTCAGCCATAAGTTCGATGACGAGGACGACATGTCGTTTCGTTTCCAGAAACTGTCGGATTTTCAGATGAAGAAGAATCTTGTGGAGGTGTTGGCTGAAATGAACGACATCAATGAGGAGGAGAATTTGATTGAGATCGACATATCGATGGGCTCCATTAAATATTCAAGGTTTGAAATTGAAGCTTGA

Protein sequence

MKLKITVEDQMANLPLRTPLSWFIALTSFLLCLGFLGFRFFSSFLLTSIALIMSMLYFSISKRNSLPVQKFVQEEEEEEEEEEEEEEEEEEEDQKELNFLSDQLKFSSASGPTTGDLLSESECADDNFTTTEESEVEWPYFDRRSYTAKNTDRSDDGSISDEESLIEIALPTGHYVSHKFDDEDDMSFRFQKLSDFQMKKNLVEVLAEMNDINEEENLIEIDISMGSIKYSRFEIEA

Homology

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BLAST of CaUC02G035130 vs. NCBI nr
Match: XP_008464163.1 (PREDICTED: uncharacterized protein LOC103502111 [Cucumis melo])

HSP 1 Score: 334.7 bits (857), Expect = 6.4e-88
Identity = 195/244 (79.92%), Postives = 204/244 (83.61%), Query Frame = 0


Query: 1   MKLKITVEDQMAN-LPLRTPLSWFIALTSFLLCLGFLGFRFFSSFLLTSIALIMSMLYFS 60
           MKLKI VE+QMAN  PLR PLSWF+ LT FL CLGFLGFRFFSSFL TSIALIMSMLYFS
Sbjct: 1   MKLKIKVENQMANTFPLRKPLSWFLVLTFFLRCLGFLGFRFFSSFLFTSIALIMSMLYFS 60

Query: 61  ISKRNSLPVQKFVQEEEEEEEEEEEEEEEEEEEDQKELNFLSDQLKFSSASGPTTGDLLS 120
           ISKR+SLP+QKFVQ           E+EEEEEEDQKEL F SD LK SSAS PTT DLLS
Sbjct: 61  ISKRSSLPIQKFVQ-----------EQEEEEEEDQKELTFFSDHLKSSSASAPTTRDLLS 120

Query: 121 ESECADDNFTTTEESEVEWPYFDRRSYTAKNTDRSDDGSISDEESLIEIALPTGHYVSHK 180
           ESECADDNFTTTEESEVEWPYFD R Y A++  RSDDGSISDEESLIEIALPTGHYVS K
Sbjct: 121 ESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEESLIEIALPTGHYVSRK 180

Query: 181 FD------DEDDMSFRFQKLSDFQMKKNLVEVLAEMNDINEEENLIEIDISMGSIKYSRF 238
           FD      DEDD  FR+QKLSDFQ KKNLVEVLAE+NDINEEENLIEIDISMGSIKYSRF
Sbjct: 181 FDDVDEDEDEDDTPFRYQKLSDFQ-KKNLVEVLAEINDINEEENLIEIDISMGSIKYSRF 232

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BLAST of CaUC02G035130 vs. NCBI nr
Match: XP_038902685.1 (uncharacterized protein LOC120089322 [Benincasa hispida])

HSP 1 Score: 334.7 bits (857), Expect = 6.4e-88
Identity = 192/229 (83.84%), Postives = 198/229 (86.46%), Query Frame = 0


Query: 14  LPLRTPLSWFIALTSFLLCLGFLGFRFFSSFLLTSIALIMSMLYFSISKRNSLPVQKFVQ 73
           LPLRTPLSWFIALT FLLCLGFLGFR FSSFLLTSIALIMSMLYFSISKRNSLP+QKFVQ
Sbjct: 5   LPLRTPLSWFIALTFFLLCLGFLGFRSFSSFLLTSIALIMSMLYFSISKRNSLPIQKFVQ 64

Query: 74  EEEEEEEEEEEEEEEEEEEDQKELNFLSDQLKFSSASGPTTGDLLSESECADDNFTTTEE 133
                     + +EEEEEEDQK+L F SD LK SS S PTTGDLLSESECADDNFTTTEE
Sbjct: 65  ----------QVQEEEEEEDQKKLTFFSDHLKSSSVSAPTTGDLLSESECADDNFTTTEE 124

Query: 134 SEVEWPYFDRRSYTAKNTDRSDDGSISDEESLIEIALPTGHYVSHKFD-----DEDDMSF 193
           SEVEWPYFD RSY   N DRSDDGSISDEESLIEIALPTGHYVSHKFD     DED MSF
Sbjct: 125 SEVEWPYFDHRSYKPNNPDRSDDGSISDEESLIEIALPTGHYVSHKFDDVDDEDEDGMSF 184

Query: 194 RFQKLSDFQMKKNLVEVLAEMNDINEEENLIEIDISMGSIKYSRFEIEA 238
           R+QKLSDFQ KKNLVEVLAE+NDINEEENLIEIDISMGSIKYSRFEIEA
Sbjct: 185 RYQKLSDFQ-KKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA 222

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BLAST of CaUC02G035130 vs. NCBI nr
Match: XP_011656887.2 (uncharacterized protein LOC105435780 [Cucumis sativus] >KAE8646805.1 hypothetical protein Csa_005290 [Cucumis sativus])

HSP 1 Score: 329.3 bits (843), Expect = 2.7e-86
Identity = 193/242 (79.75%), Postives = 203/242 (83.88%), Query Frame = 0


Query: 1   MKLKITVEDQMAN-LPLRTPLSWFIALTSFLLCLGFLGFRFFSSFLLTSIALIMSMLYFS 60
           MKLKI VE+QMAN LPLR P SW I LT FLLCLGF GFRFFSSFL TSIALIMSMLYFS
Sbjct: 1   MKLKIKVENQMANTLPLRKPSSWCIVLTFFLLCLGFWGFRFFSSFLFTSIALIMSMLYFS 60

Query: 61  ISKRNSLPVQKFVQEEEEEEEEEEEEEEEEEEEDQKELNFLSDQLKFSSASGPTTGDLLS 120
           ISKRNSLP++KFVQ          EEEEEEEEEDQK+L F SD LK SSAS PT  DLLS
Sbjct: 61  ISKRNSLPIRKFVQ----------EEEEEEEEEDQKQLTFFSDHLKSSSASAPTIEDLLS 120

Query: 121 ESECADDNFTTTEESEVEWPYFDRRSYTAKNTDRSDDGSISDEESLIEIALPTGHYVSHK 180
           ESECADDNFTTTEESEVEWPYFD R    +N  RSDDGSISDEESLIEIALPTGHYVS K
Sbjct: 121 ESECADDNFTTTEESEVEWPYFDHRFNKTRNPHRSDDGSISDEESLIEIALPTGHYVSRK 180

Query: 181 FD----DEDDMSFRFQKLSDFQMKKNLVEVLAEMNDINEEENLIEIDISMGSIKYSRFEI 238
           FD    DEDD+SFR+QKL+DFQ +KNLVEVLAE+NDINEEENLIEIDISMGSIKYSRFEI
Sbjct: 181 FDDVDEDEDDISFRYQKLTDFQ-RKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEI 231

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BLAST of CaUC02G035130 vs. NCBI nr
Match: XP_022140584.1 (uncharacterized protein LOC111011203 [Momordica charantia])

HSP 1 Score: 285.8 bits (730), Expect = 3.4e-73
Identity = 180/243 (74.07%), Postives = 192/243 (79.01%), Query Frame = 0


Query: 1   MKLKITVEDQMANLPLRTPLSWFIALTSFLLCLGFLGFRFFSSFLLTSIALIMSMLYFSI 60
           MKLKI VEDQMA  PLR PLSWF   +  LLCLGFLG RF S+F LTS  LIMSMLYF+I
Sbjct: 1   MKLKIRVEDQMATPPLRNPLSWFSVFSFLLLCLGFLGLRFSSNFPLTSTILIMSMLYFAI 60

Query: 61  SKRNSLPVQKFVQEEEEEEEEEEEEEEEEEEEDQKELNFLSDQLKFSSASGPTTGDLLSE 120
           SKRNSLP+   +  E+  EEEEEE E         E++F SDQ KFSSAS P TGDLLSE
Sbjct: 61  SKRNSLPIPIPIPIEKFVEEEEEEAE--------AEVSFDSDQ-KFSSASAP-TGDLLSE 120

Query: 121 SECADDNFTTTEESEVEWPYFDRRSYTAKNTDRSDDGSISDEESLIEIALPTGHYVSHKF 180
           SECADDNFTTTEESEVEWP+ DR   TA N DRS DGSISDEESLIEIALPTGHYVSHKF
Sbjct: 121 SECADDNFTTTEESEVEWPFSDRT--TAHNPDRS-DGSISDEESLIEIALPTGHYVSHKF 180

Query: 181 D------DEDDMSFRFQKLSDFQMKKNLVEVLAEMNDINEEENLIEIDISMGSIKYSRFE 238
           D      DEDDMSF  QKLSDFQ +KNLVE+LAE+NDINEEENLIEIDISMGSIKYSRFE
Sbjct: 181 DDDEEDEDEDDMSFHLQKLSDFQKQKNLVELLAEINDINEEENLIEIDISMGSIKYSRFE 230

[Close]

BLAST of CaUC02G035130 vs. NCBI nr
Match: XP_022985724.1 (uncharacterized protein LOC111483694 [Cucurbita maxima])

HSP 1 Score: 281.2 bits (718), Expect = 8.4e-72
Identity = 178/245 (72.65%), Postives = 190/245 (77.55%), Query Frame = 0


Query: 1   MKLKITVEDQMANLPLRTPLSWFIALTSFLLCLGFLGF-RFFSSFLLTSIALIMSMLYFS 60
           MKLKIT EDQMA  PL+ PLS FI LT FLL L FLGF RFFSSFLLT  ALIMSMLYFS
Sbjct: 1   MKLKITFEDQMAT-PLKNPLSLFIVLTFFLLSLSFLGFIRFFSSFLLTFTALIMSMLYFS 60

Query: 61  ISKRNSLPVQKFVQEEEEEEEEEEEEEEEEEEEDQKELNFL-SDQLKFSSASGPTTGDLL 120
           ISK N  P+ K +  +++EE              QKEL FL SD   FSSAS PT  DLL
Sbjct: 61  ISKTNPFPLHKSLHHQQQEE--------------QKELTFLSSDHRNFSSASAPTV-DLL 120

Query: 121 SESECADDNFTTTEESEVEWPYFDRRSYTAKNTDRSDDGSISDEESLIEIALPTGHYVSH 180
           SESECADDNFTTTEESEVEWP+FDR   TAKN  RSDDGSISDEESLIEIALPTGHYV+H
Sbjct: 121 SESECADDNFTTTEESEVEWPFFDRS--TAKNLYRSDDGSISDEESLIEIALPTGHYVNH 180

Query: 181 KFDDE---DDMSFRFQKLSDFQ---MKKNLVEVLAEMNDINEEENLIEIDISMGSIKYSR 238
           K DD+   DDMSF FQKLS+FQ    KKNLVE+LAE+NDINEEENLIEIDISMGSIKYSR
Sbjct: 181 KSDDDDDKDDMSFCFQKLSEFQKLKRKKNLVELLAEINDINEEENLIEIDISMGSIKYSR 227

[Close]

BLAST of CaUC02G035130 vs. ExPASy TrEMBL
Match: A0A1S3CMD0 (uncharacterized protein LOC103502111 OS=Cucumis melo OX=3656 GN=LOC103502111 PE=4 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 3.1e-88
Identity = 195/244 (79.92%), Postives = 204/244 (83.61%), Query Frame = 0


Query: 1   MKLKITVEDQMAN-LPLRTPLSWFIALTSFLLCLGFLGFRFFSSFLLTSIALIMSMLYFS 60
           MKLKI VE+QMAN  PLR PLSWF+ LT FL CLGFLGFRFFSSFL TSIALIMSMLYFS
Sbjct: 1   MKLKIKVENQMANTFPLRKPLSWFLVLTFFLRCLGFLGFRFFSSFLFTSIALIMSMLYFS 60

Query: 61  ISKRNSLPVQKFVQEEEEEEEEEEEEEEEEEEEDQKELNFLSDQLKFSSASGPTTGDLLS 120
           ISKR+SLP+QKFVQ           E+EEEEEEDQKEL F SD LK SSAS PTT DLLS
Sbjct: 61  ISKRSSLPIQKFVQ-----------EQEEEEEEDQKELTFFSDHLKSSSASAPTTRDLLS 120

Query: 121 ESECADDNFTTTEESEVEWPYFDRRSYTAKNTDRSDDGSISDEESLIEIALPTGHYVSHK 180
           ESECADDNFTTTEESEVEWPYFD R Y A++  RSDDGSISDEESLIEIALPTGHYVS K
Sbjct: 121 ESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEESLIEIALPTGHYVSRK 180

Query: 181 FD------DEDDMSFRFQKLSDFQMKKNLVEVLAEMNDINEEENLIEIDISMGSIKYSRF 238
           FD      DEDD  FR+QKLSDFQ KKNLVEVLAE+NDINEEENLIEIDISMGSIKYSRF
Sbjct: 181 FDDVDEDEDEDDTPFRYQKLSDFQ-KKNLVEVLAEINDINEEENLIEIDISMGSIKYSRF 232

[Close]

BLAST of CaUC02G035130 vs. ExPASy TrEMBL
Match: A0A6J1CG35 (uncharacterized protein LOC111011203 OS=Momordica charantia OX=3673 GN=LOC111011203 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.6e-73
Identity = 180/243 (74.07%), Postives = 192/243 (79.01%), Query Frame = 0


Query: 1   MKLKITVEDQMANLPLRTPLSWFIALTSFLLCLGFLGFRFFSSFLLTSIALIMSMLYFSI 60
           MKLKI VEDQMA  PLR PLSWF   +  LLCLGFLG RF S+F LTS  LIMSMLYF+I
Sbjct: 1   MKLKIRVEDQMATPPLRNPLSWFSVFSFLLLCLGFLGLRFSSNFPLTSTILIMSMLYFAI 60

Query: 61  SKRNSLPVQKFVQEEEEEEEEEEEEEEEEEEEDQKELNFLSDQLKFSSASGPTTGDLLSE 120
           SKRNSLP+   +  E+  EEEEEE E         E++F SDQ KFSSAS P TGDLLSE
Sbjct: 61  SKRNSLPIPIPIPIEKFVEEEEEEAE--------AEVSFDSDQ-KFSSASAP-TGDLLSE 120

Query: 121 SECADDNFTTTEESEVEWPYFDRRSYTAKNTDRSDDGSISDEESLIEIALPTGHYVSHKF 180
           SECADDNFTTTEESEVEWP+ DR   TA N DRS DGSISDEESLIEIALPTGHYVSHKF
Sbjct: 121 SECADDNFTTTEESEVEWPFSDRT--TAHNPDRS-DGSISDEESLIEIALPTGHYVSHKF 180

Query: 181 D------DEDDMSFRFQKLSDFQMKKNLVEVLAEMNDINEEENLIEIDISMGSIKYSRFE 238
           D      DEDDMSF  QKLSDFQ +KNLVE+LAE+NDINEEENLIEIDISMGSIKYSRFE
Sbjct: 181 DDDEEDEDEDDMSFHLQKLSDFQKQKNLVELLAEINDINEEENLIEIDISMGSIKYSRFE 230

[Close]

BLAST of CaUC02G035130 vs. ExPASy TrEMBL
Match: A0A6J1JE34 (uncharacterized protein LOC111483694 OS=Cucurbita maxima OX=3661 GN=LOC111483694 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 4.0e-72
Identity = 178/245 (72.65%), Postives = 190/245 (77.55%), Query Frame = 0


Query: 1   MKLKITVEDQMANLPLRTPLSWFIALTSFLLCLGFLGF-RFFSSFLLTSIALIMSMLYFS 60
           MKLKIT EDQMA  PL+ PLS FI LT FLL L FLGF RFFSSFLLT  ALIMSMLYFS
Sbjct: 1   MKLKITFEDQMAT-PLKNPLSLFIVLTFFLLSLSFLGFIRFFSSFLLTFTALIMSMLYFS 60

Query: 61  ISKRNSLPVQKFVQEEEEEEEEEEEEEEEEEEEDQKELNFL-SDQLKFSSASGPTTGDLL 120
           ISK N  P+ K +  +++EE              QKEL FL SD   FSSAS PT  DLL
Sbjct: 61  ISKTNPFPLHKSLHHQQQEE--------------QKELTFLSSDHRNFSSASAPTV-DLL 120

Query: 121 SESECADDNFTTTEESEVEWPYFDRRSYTAKNTDRSDDGSISDEESLIEIALPTGHYVSH 180
           SESECADDNFTTTEESEVEWP+FDR   TAKN  RSDDGSISDEESLIEIALPTGHYV+H
Sbjct: 121 SESECADDNFTTTEESEVEWPFFDRS--TAKNLYRSDDGSISDEESLIEIALPTGHYVNH 180

Query: 181 KFDDE---DDMSFRFQKLSDFQ---MKKNLVEVLAEMNDINEEENLIEIDISMGSIKYSR 238
           K DD+   DDMSF FQKLS+FQ    KKNLVE+LAE+NDINEEENLIEIDISMGSIKYSR
Sbjct: 181 KSDDDDDKDDMSFCFQKLSEFQKLKRKKNLVELLAEINDINEEENLIEIDISMGSIKYSR 227

[Close]

BLAST of CaUC02G035130 vs. ExPASy TrEMBL
Match: A0A6J1FUA8 (uncharacterized protein LOC111448485 OS=Cucurbita moschata OX=3662 GN=LOC111448485 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 5.3e-72
Identity = 177/247 (71.66%), Postives = 191/247 (77.33%), Query Frame = 0


Query: 1   MKLKITVEDQMANLPLRTPLSWFIALTSFLLCLGFLGF-RFFSSFLLTSIALIMSMLYFS 60
           MKLKIT EDQMA  P++ PLS FI LT FLL LGFLGF RFFSSF+LT  ALIMSMLYFS
Sbjct: 1   MKLKITFEDQMAT-PMKNPLSLFIVLTFFLLSLGFLGFIRFFSSFVLTFTALIMSMLYFS 60

Query: 61  ISKRNSLPVQKFVQEEEEEEEEEEEEEEEEEEEDQKELNFL-SDQLKFSSASGPTTGDLL 120
           ISK N  P+ K + +++++E              QKEL FL SD   FSSAS PT  DLL
Sbjct: 61  ISKTNPFPLHKSLHQQQQQE--------------QKELTFLSSDHRNFSSASAPTV-DLL 120

Query: 121 SESECADDNFTTTEESEVEWPYFDRRSYTAKNTDRSDDGSISDEESLIEIALPTGHYVSH 180
           SESECADDNFTTTEESEVEWP+FDR   TA N  RSDDGSISDEESLIEIALPTGHYVSH
Sbjct: 121 SESECADDNFTTTEESEVEWPFFDRS--TANNLYRSDDGSISDEESLIEIALPTGHYVSH 180

Query: 181 KF-----DDEDDMSFRFQKLSDFQ---MKKNLVEVLAEMNDINEEENLIEIDISMGSIKY 238
           K      DDEDDMSF FQKLS+FQ    KKNLVE+LAE+NDINEEENLIEIDISMGSIKY
Sbjct: 181 KSDDDDDDDEDDMSFCFQKLSEFQKLKRKKNLVELLAEINDINEEENLIEIDISMGSIKY 229

[Close]

BLAST of CaUC02G035130 vs. ExPASy TrEMBL
Match: A0A5A7UY43 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00220 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 4.2e-69
Identity = 159/191 (83.25%), Postives = 166/191 (86.91%), Query Frame = 0


Query: 53  MSMLYFSISKRNSLPVQKFVQEEEEEEEEEEEEEEEEEEEDQKELNFLSDQLKFSSASGP 112
           MSMLYFSISKR+SLP+QKFVQ    E+EEEEEEEEEEEEEDQKEL F SD LK SSAS P
Sbjct: 1   MSMLYFSISKRSSLPIQKFVQ----EQEEEEEEEEEEEEEDQKELTFFSDHLKSSSASAP 60

Query: 113 TTGDLLSESECADDNFTTTEESEVEWPYFDRRSYTAKNTDRSDDGSISDEESLIEIALPT 172
           TT DLLSESECADDNFTTTEESEVEWPYFD R Y A++  RSDDGSISDEESLIEIALPT
Sbjct: 61  TTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEESLIEIALPT 120

Query: 173 GHYVSHKFD------DEDDMSFRFQKLSDFQMKKNLVEVLAEMNDINEEENLIEIDISMG 232
           GHYVS KFD      DEDD  FR+QKLSDFQ KKNLVEVLAE+NDINEEENLIEIDISMG
Sbjct: 121 GHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQ-KKNLVEVLAEINDINEEENLIEIDISMG 180

Query: 233 SIKYSRFEIEA 238
           SIKYSRFEIEA
Sbjct: 181 SIKYSRFEIEA 186

[Close]

BLAST of CaUC02G035130 vs. TAIR 10
Match: AT2G04480.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G35870.1); Has 38 Blast hits to 38 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 79.0 bits (193), Expect = 5.9e-15
Identity = 76/227 (33.48%), Postives = 116/227 (51.10%), Query Frame = 0


Query: 11  MANLPLRTPLSWFIALTSFLLCLGFLGFRFFSSFLLTSIALIMSMLYFSISKRNSLPVQK 70
           +A++ L+ P SW   L   LL +  LG RF    LLT  AL  S  +F IS  +S     
Sbjct: 81  LASILLKRPFSWVSLLAPPLLHI--LGIRFL-HLLLTCTALFFSSFFFPISLPHS----- 140

Query: 71  FVQEEEEEEEEEEEEEEEEEEEDQKELNFLSDQLKFSSASGPTTGDLLSESECADDNFTT 130
            +Q  ++++++E               ++++            T D+  +SE   +N   
Sbjct: 141 SIQSSKQDQDQEG--------------HYIA------------TKDITGKSE---ENLEK 200

Query: 131 TEESEVEWPYFDRRSYTAKNTDRSDDGSISDEESLIEIALPTGHYVSHKFDDEDDMSFRF 190
           T E +                   DDG+I D+ESLIE++LP+GHY+ H ++   +  +  
Sbjct: 201 TNEED-------------------DDGAIPDDESLIELSLPSGHYLGHHYNSNKNHLYIH 247

Query: 191 QKLSDFQMKKNLVEVLAEMNDINEEENLIEIDISMGSIKYSRFEIEA 238
            K+ DF+    L ++L E+ND  EE+NLIEIDIS+GSIKYSRFEI+A
Sbjct: 261 NKVQDFR----LFDLLNEINDFTEEDNLIEIDISIGSIKYSRFEIKA 247

[Close]

BLAST of CaUC02G035130 vs. TAIR 10
Match: AT5G35870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G04480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 72.0 bits (175), Expect = 7.2e-13
Identity = 76/229 (33.19%), Postives = 103/229 (44.98%), Query Frame = 0


Query: 14  LPLRTPLSWFIALTSFLLCLGFLGFRFFSSFLLTSIALIMSMLYF--SISKRNSLPVQKF 73
           L  + P+SW   L   LL +  LG   FS  +LTS AL  S  +F  SI K NS  VQ  
Sbjct: 38  LRFKRPVSWLSFLAPPLLHIIGLG---FSQIILTSAALFFSSFFFPLSIQKPNS-KVQDL 97

Query: 74  VQEEEEEEEEEEEEEEEEEEEDQKELNFLSDQLKFSSASGPTTGDLLSESECADDNFTTT 133
            Q+                           D L  +  S  TT D++             
Sbjct: 98  SQQ---------------------------DYLGETELSSTTTNDIV------------- 157

Query: 134 EESEVEWPYFDRRSYTAKNTDRSDDGSISDEESLIEIALPTGHYVSHKFD---DEDDMSF 193
                            KN D  DDG+I DEESLIE++LP+GHY+ H +     + D   
Sbjct: 158 -----------------KNND-EDDGTIPDEESLIELSLPSGHYIGHHYSTMIGKQDQKI 196

Query: 194 RFQKLSDFQMKKNLVEVLAEMNDINEEENLIEIDISMGSIKYSRFEIEA 238
            +  + DF+    L+++ AE     E++NLIEIDIS+GSIK SRF+I+A
Sbjct: 218 MYNNIPDFR----LIQLSAEY----EDDNLIEIDISIGSIKCSRFQIKA 196

The following BLAST results are available for this feature:

BLAST of CaUC02G035130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464163.1	6.4e-88	79.92	PREDICTED: uncharacterized protein LOC103502111 [Cucumis melo]	[more]
XP_038902685.1	6.4e-88	83.84	uncharacterized protein LOC120089322 [Benincasa hispida]	[more]
XP_011656887.2	2.7e-86	79.75	uncharacterized protein LOC105435780 [Cucumis sativus] >KAE8646805.1 hypothetica...	[more]
XP_022140584.1	3.4e-73	74.07	uncharacterized protein LOC111011203 [Momordica charantia]	[more]
XP_022985724.1	8.4e-72	72.65	uncharacterized protein LOC111483694 [Cucurbita maxima]	[more]

BLAST of CaUC02G035130 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC02G035130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CMD0	3.1e-88	79.92	uncharacterized protein LOC103502111 OS=Cucumis melo OX=3656 GN=LOC103502111 PE=...	[more]
A0A6J1CG35	1.6e-73	74.07	uncharacterized protein LOC111011203 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A6J1JE34	4.0e-72	72.65	uncharacterized protein LOC111483694 OS=Cucurbita maxima OX=3661 GN=LOC111483694...	[more]
A0A6J1FUA8	5.3e-72	71.66	uncharacterized protein LOC111448485 OS=Cucurbita moschata OX=3662 GN=LOC1114484...	[more]
A0A5A7UY43	4.2e-69	83.25	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of CaUC02G035130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G04480.1	5.9e-15	33.48	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G35870.1	7.2e-13	33.19	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 68..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..96
None	No IPR available	PANTHER	PTHR35708	GB\|AAD25831.1	coord: 15..237
None	No IPR available	PANTHER	PTHR35708:SF3	GB\|AAD25831.1	coord: 15..237

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC02G035130.1	CaUC02G035130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane