
CaUC02G035120 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCTTTTTCTATATCAACTGAAATTGTAATATCTGAAGACATGGTTCGTTCATTTCTTCACTCAATTCTCGATTTGGGTGCTTCTTTTTCTGCAATTCATCCTCATTATTGGGTATCTAACCTAATTCCATGTTTCTTCAACTTGGGTCTACTTCTTTTTTCTTTTTTTTAATTCTTCTTGAAATCTTGCCTTTACTGTGATGACGTATGCTTTGTCTCTTCTTTTCACTTCGTGATTTTCCCCCCCTTTTAATTGCATCGACTGATTTTTGGTTCTGACGATTGAAATCTCAACTGGGTTTTGCTTTGTTTTTTTTTCAGATGGGGCATACTCTTTTGCTGAATTGAATTATGAGAACACGAAGAAGTGTAGAGAAGCAATTTTTTTGGTATCCTGCTCATAGGTTTTCAGAGCCCATACTTGAGTTTGCTGTGCGTTTTGTTGAATTTCATCTCCCCGGCAGAGGTATTCCTTGATTTGTTTCTAAAGAATCTGGAAATTGGGTTTTGTTTGTTCTTTCCCTGTAAACAAAACCAAAGAAAAAATTTATATGTATGCATGTATTAAACTGGGATATCTGGTTTGCTTGTCTGGACTATGCTAGTTCTGAGTTTAGGATTCTGAAGGGTTAGAGGTTCGTTTCTTTTGTTCCTCACTGATTTTTCTTCCTGCCACTTAATGTGAATTCTGGTGTTTTAACAGTATTAGCTAGTGAAAAAGTATTTGTGGCAGAACTATTTTCTTCTCTTGTTTCGAACTTTTAAATTCCACTGAATTCAAGGATTAAGTACAATTGTTCCTTCTAGTTTCTGAGAACAAAATGATTTGGATTTGCCCTCTAGTGTTTTCTTTTTATCTCTGGATATTAGGCCATGTGAATTACTCTTTTGAGGTTGGGCAGGCGTCAGAACTTAAAAAGGTCATAATACAATGAATAATGAGGAAGTGTCTATCACACCAAGGACATCTGTGAAGATCTCATGGAACCATGGAGGAAAGCAAGTGGCTATTATTGGGTCATGGGATAACTGGGAGACAAGGTACTACTTTGAATTTAAGATGTTTGATTATGAACATTTTTTTTAATCTAATATAGAACATTCCGTCTCTTTCTGTTAGGGAGATCTTGCAGAGCATAGGAAAAGAATTTATTACTATAAAGACACTTCCCTCGGGGATCTACCATTACCGCTTCATGGTTGATGGATGGTTGACATGTGCTCCTGATTTGCCATGGGTTTGTGATGATTCGGGAAATTCTTACAATATTCTGGACTTGATGGTAATTCACGACTTCAATGTTATCTGTTTAGATAATTGACACCCCATATATCTATCTTATAGCTTATATTTATAGTAACTTGAGATTATATGGACTGACTCCATATTTCTTTTTTTATTCTTTGTTTCATTAAAAAAAATGATTTGATAGTTTTATGTTTGCTTTCAACCAAATTCTATGTAAATACAAAAGGTCATGTTGAGTTGCATTTGTTCAATTTTTTTTTTTCTGTTAACATAATATAGCGACTAAGATTTATACTGATTACACAAGCTTTTACATGAGAAAATATAGTCATAGTTTCTCTACCATTTTTGTTGACTTGGATGCACGGCATCTGCTCAATGATTCATTCCTAGATTTCTTAGGAAGATGATAAAGGAAATATCCCACTGTAAAGATTGTCCAAAAGAATACCTTTTTATTTTTCAAATGGGATCAGTGGTCTTTGCATGATTCCTGACCATGTCCTTGAAAAGATATTTGCTTTGGACTGACCTTTCCCCTAAATATCCAACTTTTGATCGAGTTTTAGAGTTCACAATTCAAAGAGAAATTTGGTTGCCCCGTGTGGATTCTGGGGAAAAAAATGAAAATTAAAAAAAATCCCGGCGTTCAACTGATAGGAAAAGAAAAAATGTGATGGTACAGTTAAGTTTGCAACTTATTCTTATTTTATTTCTTATCAAACCACTTTATGGGCTGTTTGGTTAAGATTTTCGGTTGATAAGAGTGTCCATTCAGACATGATGGAATGAGATGTCAAAACCACTTATGGACTGTGTATTTTTGAATTGAGGGGCTTAAAAAGGGGAAACAAAGGTTGAGTGGTGTATATGTGATGTATGAGCATTGAAAGCCCAGGTATTCTAATGGGTTACCAATTACTATGCTCATGGGGCAAGGGAAGAAAATGATTGATTTAATTTTGGATGCTCGAGTATGAAAGATTGAAAGTGAAACAAATCTAGGTCTCTAGTTCTCCTGTCAAGTTCTGCTGAACCAACAGGCCCTGATGTTTCTTTCATTAGGTTTGGCTATTCTTTATTGCCGGTCTTTGTTAATTATGGTTAAATCAATCTTAATAAAAGAGCTCTTTGCCTGCCCAGTACTAATTTGAATTTATATTGAAATTGTCTTACAGACACCTGTCTCGGAATTGCCCGAAAGTCTTTCTGAGTTTGAATTTCCTCCATCCCCACCATCTAGTTATGATAACCAATGCTTCAACGATGATGATTTCAGTAGGCCTCCACCGGATCTACCACCCCAATTGCGAGAGACTGTTTTGAATGAACCATCTTGCTGCACAAGTGGTCATCAGTCCGGTGTGCAGCCTCGACACACTGAATTAAATCATTTATACCAAAATAATGTTGGAGGTGAATTCATGGCACTTGGTTCAACATTCAAGTTTTGTGAAAAATATGTCACAATGTTACTTTTCAAGCCCTTGCTGAGAAGAAATTGATAAGACTTTGGTCAACTGTTTTTTCCCCCCCTTCAAAATTTGTGGCCTACCCTTCTGTATTTCAACCTCTTAGCTGGGATTAATTGAGCAATGATTATTTATGTGAAGATTGTTGTTATACTAATAGATTGAAGAGAGCTTGAAATAGAATTCATTTCCATATGTTTTAATACCTCTGTTAATTGTGGATCCAATTCTCTATTCCCAATTTGTTTGTATTTCAAAGCTATTTACATGTATTGGTTCCTTGAAAGAAGTCATGGAAATTGCTAGCGACCATGCCCTCAAAAGTACTAGTTTTGATGCAGCGAGAGATCTGCTGCTAGACATGAAGAGGTTTCAGCTACAAAGGATATGTAAACTCTATATTCTTTCTTCCCTTTTACTTGTGCAGTATGTTCAAACCATTGGAATGGAAATGTTGAACTGAATCCATTAAATTGTTCCCAGGTTTTTCTGCATCTTCTAGATATCATC TTCTTTTTCTATATCAACTGAAATTGTAATATCTGAAGACATGGTTCGTTCATTTCTTCACTCAATTCTCGATTTGGGTGCTTCTTTTTCTGCAATTCATCCTCATTATTGGATGGGGCATACTCTTTTGCTGAATTGAATTATGAGAACACGAAGAAGTGTAGAGAAGCAATTTTTTTGGTATCCTGCTCATAGGTTTTCAGAGCCCATACTTGAGTTTGCTGTGCGTTTTGTTGAATTTCATCTCCCCGGCAGAGGCGTCAGAACTTAAAAAGGTCATAATACAATGAATAATGAGGAAGTGTCTATCACACCAAGGACATCTGTGAAGATCTCATGGAACCATGGAGGAAAGCAAGTGGCTATTATTGGGTCATGGGATAACTGGGAGACAAGGGAGATCTTGCAGAGCATAGGAAAAGAATTTATTACTATAAAGACACTTCCCTCGGGGATCTACCATTACCGCTTCATGGTTGATGGATGGTTGACATGTGCTCCTGATTTGCCATGGGTTTGTGATGATTCGGGAAATTCTTACAATATTCTGGACTTGATGACACCTGTCTCGGAATTGCCCGAAAGTCTTTCTGAGTTTGAATTTCCTCCATCCCCACCATCTAGTTATGATAACCAATGCTTCAACGATGATGATTTCAGTAGGCCTCCACCGGATCTACCACCCCAATTGCGAGAGACTGTTTTGAATGAACCATCTTGCTGCACAAGTGGTCATCAGTCCGGTGTGCAGCCTCGACACACTGAATTAAATCATTTATACCAAAATAATGTTGGAGGTGAATTCATGGCACTTGGTTCAACATTCAAGTTTTGTGAAAAATATGTCACAATGTTACTTTTCAAGCCCTTGCTGAGAAGAAATTGATAAGACTTTGGTCAACTGTTTTTTCCCCCCCTTCAAAATTTGTGGCCTACCCTTCTGTATTTCAACCTCTTAGCTGGGATTAATTGAGCAATGATTATTTATGTGAAGATTGTTGTTATACTAATAGATTGAAGAGAGCTTGAAATAGAATTCATTTCCATATGTTTTAATACCTCTGTTAATTGTGGATCCAATTCTCTATTCCCAATTTGTTTGTATTTCAAAGCTATTTACATGTATTGGTTCCTTGAAAGAAGTCATGGAAATTGCTAGCGACCATGCCCTCAAAAGTACTAGTTTTGATGCAGCGAGAGATCTGCTGCTAGACATGAAGAGGTTTCAGCTACAAAGGATATGTAAACTCTATATTCTTTCTTCCCTTTTACTTGTGCAGTATGTTCAAACCATTGGAATGGAAATGTTGAACTGAATCCATTAAATTGTTCCCAGGTTTTTCTGCATCTTCTAGATATCATC ATGAATAATGAGGAAGTGTCTATCACACCAAGGACATCTGTGAAGATCTCATGGAACCATGGAGGAAAGCAAGTGGCTATTATTGGGTCATGGGATAACTGGGAGACAAGGGAGATCTTGCAGAGCATAGGAAAAGAATTTATTACTATAAAGACACTTCCCTCGGGGATCTACCATTACCGCTTCATGGTTGATGGATGGTTGACATGTGCTCCTGATTTGCCATGGGTTTGTGATGATTCGGGAAATTCTTACAATATTCTGGACTTGATGACACCTGTCTCGGAATTGCCCGAAAGTCTTTCTGAGTTTGAATTTCCTCCATCCCCACCATCTAGTTATGATAACCAATGCTTCAACGATGATGATTTCAGTAGGCCTCCACCGGATCTACCACCCCAATTGCGAGAGACTGTTTTGAATGAACCATCTTGCTGCACAAGTGGTCATCAGTCCGGTGTGCAGCCTCGACACACTGAATTAAATCATTTATACCAAAATAATGTTGGAGGTGAATTCATGGCACTTGGTTCAACATTCAAGTTTTGTGAAAAATATGTCACAATGTTACTTTTCAAGCCCTTGCTGAGAAGAAATTGA MNNEEVSITPRTSVKISWNHGGKQVAIIGSWDNWETREILQSIGKEFITIKTLPSGIYHYRFMVDGWLTCAPDLPWVCDDSGNSYNILDLMTPVSELPESLSEFEFPPSPPSSYDNQCFNDDDFSRPPPDLPPQLRETVLNEPSCCTSGHQSGVQPRHTELNHLYQNNVGGEFMALGSTFKFCEKYVTMLLFKPLLRRN Homology
BLAST of CaUC02G035120 vs. NCBI nr
Match: XP_038902665.1 (SNF1-related protein kinase regulatory subunit beta-2-like isoform X2 [Benincasa hispida]) HSP 1 Score: 416.8 bits (1070), Expect = 1.1e-112 Identity = 193/199 (96.98%), Postives = 196/199 (98.49%), Query Frame = 0
BLAST of CaUC02G035120 vs. NCBI nr
Match: XP_038902663.1 (SNF1-related protein kinase regulatory subunit beta-2-like isoform X1 [Benincasa hispida] >XP_038902664.1 SNF1-related protein kinase regulatory subunit beta-2-like isoform X1 [Benincasa hispida]) HSP 1 Score: 416.8 bits (1070), Expect = 1.1e-112 Identity = 193/199 (96.98%), Postives = 196/199 (98.49%), Query Frame = 0
BLAST of CaUC02G035120 vs. NCBI nr
Match: XP_016903157.1 (PREDICTED: SNF1-related protein kinase regulatory subunit beta-2-like [Cucumis melo]) HSP 1 Score: 411.0 bits (1055), Expect = 5.9e-111 Identity = 190/199 (95.48%), Postives = 194/199 (97.49%), Query Frame = 0
BLAST of CaUC02G035120 vs. NCBI nr
Match: KAA0060799.1 (SNF1-related protein kinase regulatory subunit beta-2-like [Cucumis melo var. makuwa]) HSP 1 Score: 408.7 bits (1049), Expect = 2.9e-110 Identity = 189/199 (94.97%), Postives = 193/199 (96.98%), Query Frame = 0
BLAST of CaUC02G035120 vs. NCBI nr
Match: TYK11962.1 (SNF1-related protein kinase regulatory subunit beta-2-like [Cucumis melo var. makuwa]) HSP 1 Score: 408.7 bits (1049), Expect = 2.9e-110 Identity = 189/199 (94.97%), Postives = 193/199 (96.98%), Query Frame = 0
BLAST of CaUC02G035120 vs. ExPASy Swiss-Prot
Match: Q9SCY5 (SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana OX=3702 GN=KINB2 PE=1 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 1.7e-44 Identity = 93/196 (47.45%), Postives = 124/196 (63.27%), Query Frame = 0
BLAST of CaUC02G035120 vs. ExPASy Swiss-Prot
Match: Q84VQ1 (SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana OX=3702 GN=KINB1 PE=1 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 1.5e-37 Identity = 83/184 (45.11%), Postives = 111/184 (60.33%), Query Frame = 0
BLAST of CaUC02G035120 vs. ExPASy Swiss-Prot
Match: O43741 (5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens OX=9606 GN=PRKAB2 PE=1 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 1.8e-22 Identity = 65/206 (31.55%), Postives = 101/206 (49.03%), Query Frame = 0
BLAST of CaUC02G035120 vs. ExPASy Swiss-Prot
Match: Q6PAM0 (5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus OX=10090 GN=Prkab2 PE=1 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 4.1e-22 Identity = 62/192 (32.29%), Postives = 96/192 (50.00%), Query Frame = 0
BLAST of CaUC02G035120 vs. ExPASy Swiss-Prot
Match: Q9QZH4 (5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Prkab2 PE=1 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 9.0e-22 Identity = 62/192 (32.29%), Postives = 95/192 (49.48%), Query Frame = 0
BLAST of CaUC02G035120 vs. ExPASy TrEMBL
Match: A0A1S4E4K9 (SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucumis melo OX=3656 GN=LOC103502112 PE=3 SV=1) HSP 1 Score: 411.0 bits (1055), Expect = 2.8e-111 Identity = 190/199 (95.48%), Postives = 194/199 (97.49%), Query Frame = 0
BLAST of CaUC02G035120 vs. ExPASy TrEMBL
Match: A0A5D3CKW7 (SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G001460 PE=3 SV=1) HSP 1 Score: 408.7 bits (1049), Expect = 1.4e-110 Identity = 189/199 (94.97%), Postives = 193/199 (96.98%), Query Frame = 0
BLAST of CaUC02G035120 vs. ExPASy TrEMBL
Match: A0A5A7V520 (SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00180 PE=3 SV=1) HSP 1 Score: 408.7 bits (1049), Expect = 1.4e-110 Identity = 189/199 (94.97%), Postives = 193/199 (96.98%), Query Frame = 0
BLAST of CaUC02G035120 vs. ExPASy TrEMBL
Match: A0A6J1J923 (SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucurbita maxima OX=3661 GN=LOC111483696 PE=3 SV=1) HSP 1 Score: 407.9 bits (1047), Expect = 2.4e-110 Identity = 186/199 (93.47%), Postives = 193/199 (96.98%), Query Frame = 0
BLAST of CaUC02G035120 vs. ExPASy TrEMBL
Match: A0A6J1FXH3 (SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucurbita moschata OX=3662 GN=LOC111448487 PE=3 SV=1) HSP 1 Score: 405.6 bits (1041), Expect = 1.2e-109 Identity = 185/199 (92.96%), Postives = 193/199 (96.98%), Query Frame = 0
BLAST of CaUC02G035120 vs. TAIR 10
Match: AT4G16360.1 (5'-AMP-activated protein kinase beta-2 subunit protein ) HSP 1 Score: 180.6 bits (457), Expect = 1.2e-45 Identity = 93/196 (47.45%), Postives = 124/196 (63.27%), Query Frame = 0
BLAST of CaUC02G035120 vs. TAIR 10
Match: AT4G16360.3 (5'-AMP-activated protein kinase beta-2 subunit protein ) HSP 1 Score: 180.6 bits (457), Expect = 1.2e-45 Identity = 93/196 (47.45%), Postives = 124/196 (63.27%), Query Frame = 0
BLAST of CaUC02G035120 vs. TAIR 10
Match: AT4G16360.2 (5'-AMP-activated protein kinase beta-2 subunit protein ) HSP 1 Score: 174.9 bits (442), Expect = 6.6e-44 Identity = 92/196 (46.94%), Postives = 123/196 (62.76%), Query Frame = 0
BLAST of CaUC02G035120 vs. TAIR 10
Match: AT5G21170.1 (5'-AMP-activated protein kinase beta-2 subunit protein ) HSP 1 Score: 157.5 bits (397), Expect = 1.1e-38 Identity = 83/184 (45.11%), Postives = 111/184 (60.33%), Query Frame = 0
BLAST of CaUC02G035120 vs. TAIR 10
Match: AT5G21170.2 (5'-AMP-activated protein kinase beta-2 subunit protein ) HSP 1 Score: 157.5 bits (397), Expect = 1.1e-38 Identity = 83/184 (45.11%), Postives = 111/184 (60.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|